Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC2	0	genome.wustl.edu	37	10	101601847	101601847	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	101601847	101601847	C	G	SNP	ABCC2	NM_000392.3	human	genbank	58_37c	+1	reviewed	silent	c.3738	p.L1246	0.996	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACTR8	0	genome.wustl.edu	37	3	53908306	53908306	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	3	53908306	53908306	G	T	SNP	ACTR8	NM_022899.4	human	genbank	58_37c	-1	validated	missense	c.997	p.Q333K	1.000	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067	-	no_errors
ADAMTS3	0	genome.wustl.edu	37	4	73148964	73148964	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	4	73148964	73148964	G	T	SNP	ADAMTS3	NM_014243.1	human	genbank	58_37c	-1	reviewed	missense	c.3507	p.F1169L	0.105	NULL	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_spacer1,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AGPAT4	0	genome.wustl.edu	37	6	161570318	161570318	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	161570318	161570318	G	A	SNP	AGPAT4	ENST00000437165	human	ensembl	58_37c	-1	known	nonsense	c.4	p.Q2*	0.999	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
AIFM1	0	genome.wustl.edu	37	X	129263972	129263972	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	X	129263972	129263972	G	C	SNP	AIFM1	NM_004208.3	human	genbank	58_37c	-1	reviewed	missense	c.1743	p.I581M	1.000	superfamily_FAD/NAD-linked reductases dimerisation (C-terminal) domain	HMMPfam_Pyr_redox_2,superfamily_FAD/NAD-linked reductases dimerisation (C-terminal) domain,superfamily_FAD/NAD(P)-binding domain	-	no_errors
ARGFX	0	genome.wustl.edu	37	3	121305394	121305394	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	3	121305394	121305394	G	C	SNP	ARGFX	NM_001012659.1	human	genbank	58_37c	+1	validated	missense	c.895	p.D299H	0.003	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
ASF1A	0	genome.wustl.edu	37	6	119226836	119226836	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	119226836	119226836	G	T	SNP	ASF1A	NM_014034.2	human	genbank	58_37c	+1	reviewed	missense	c.245	p.G82V	1.000	HMMPfam_ASF1_hist_chap,superfamily_ASF1-like	HMMPfam_ASF1_hist_chap,superfamily_ASF1-like	-	no_errors
ASH1L	0	genome.wustl.edu	37	1	155429604	155429604	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	155429604	155429604	C	G	SNP	ASH1L	NM_018489.2	human	genbank	58_37c	-1	reviewed	missense	c.5070	p.E1690D	1.000	NULL	HMMPfam_BAH,HMMSmart_SM00439,HMMPfam_SET,HMMSmart_SM00317,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMSmart_SM00570,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00384,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
ASPM	0	genome.wustl.edu	37	1	197099176	197099176	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	197099176	197099176	C	T	SNP	ASPM	NM_018136.4	human	genbank	58_37c	-1	reviewed	missense	c.2498	p.G833E	1.000	superfamily_Calponin-homology domain CH-domain	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ASXL2	0	genome.wustl.edu	37	2	25978922	25978922	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	2	25978922	25978922	G	A	SNP	ASXL2	NM_018263.4	human	genbank	58_37c	-1	validated	missense	c.1001	p.S334L	1.000	NULL	NULL	-	no_errors
ATP2B1	0	genome.wustl.edu	37	12	90010583	90010583	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	12	90010583	90010583	G	T	SNP	ATP2B1	NM_001682.2	human	genbank	58_37c	-1	reviewed	missense	c.2063	p.P688H	1.000	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660,superfamily_SSF81665	-	no_errors
B4GALNT4	0	genome.wustl.edu	37	11	380848	380848	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	11	380848	380848	G	T	SNP	B4GALNT4	NM_178537.4	human	genbank	58_37c	+1	validated	missense	c.2893	p.G965C	1.000	HMMPfam_CHGN,superfamily_SSF53448	HMMPfam_CHGN,HMMPfam_PA14,HMMSmart_PA14,superfamily_SSF53448	-	no_errors
BAGE2	0	genome.wustl.edu	37	21	11058261	11058262	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	21	11058261	11058262	-	T	INS	BAGE2	NM_182482.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.63_62	p.M22fs	1.000:1.000	NULL	NULL	-	no_start_codon:no_stop_codon:bad_bp_length_for_coding_region
BRD8	0	genome.wustl.edu	37	5	137503631	137503631	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	5	137503631	137503631	G	T	SNP	BRD8	NM_139199.1	human	genbank	58_37c	-1	reviewed	missense	c.779	p.A260D	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain	-	no_errors
C10orf76	0	genome.wustl.edu	37	10	103771512	103771512	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	103771512	103771512	G	T	SNP	C10orf76	NM_024541.2	human	genbank	58_37c	-1	validated	missense	c.799	p.Q267K	1.000	NULL	HMMPfam_DUF1741	-	no_errors
C2orf86	0	genome.wustl.edu	37	2	63631316	63631316	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	2	63631316	63631316	G	T	SNP	C2orf86	NM_015910.4	human	genbank	58_37c	-1	validated	silent	c.1302	p.A434	0.998	NULL	NULL	-	no_errors
C9orf37	0	genome.wustl.edu	37	9	140510463	140510463	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	9	140510463	140510463	C	T	SNP	C9orf37	NM_032937.4	human	genbank	58_37c	-1	reviewed	nonsense	c.189	p.W63*	0.268	NULL	NULL	-	no_errors
C9orf50	0	genome.wustl.edu	37	9	132381848	132381848	+	Missense_Mutation	SNP	G	G	T	rs76476617	byFrequency	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	9	132381848	132381848	G	T	SNP	C9orf50	NM_199350.3	human	genbank	58_37c	-1	validated	missense	c.667	p.P223T	0.000	NULL	NULL	-	no_errors
CCAR1	0	genome.wustl.edu	37	10	70520826	70520826	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	70520826	70520826	G	T	SNP	CCAR1	NM_018237.2	human	genbank	58_37c	+1	validated	missense	c.1983	p.Q661H	1.000	HMMPfam_SAP,HMMSmart_SM00513,superfamily_SAP domain	HMMPfam_SAP,HMMSmart_SM00513,superfamily_EF-hand,superfamily_SAP domain	-	no_errors
CCL14	0	genome.wustl.edu	37	17	34312816	34312816	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	34312816	34312816	G	T	SNP	CCL14	NM_032962.4	human	genbank	58_37c	-1	reviewed	missense	c.95	p.P32Q	0.000	NULL	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8	-	no_errors
CDC40	0	genome.wustl.edu	37	6	110534290	110534290	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	110534290	110534290	G	T	SNP	CDC40	NM_015891.2	human	genbank	58_37c	+1	reviewed	missense	c.869	p.G290V	0.998	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
CDC42BPA	0	genome.wustl.edu	37	1	227288919	227288919	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	227288919	227288919	G	T	SNP	CDC42BPA	NM_003607.3	human	genbank	58_37c	-1	reviewed	missense	c.2023	p.P675T	1.000	NULL	HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
CDH1	0	genome.wustl.edu	37	16	68862107	68862107	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	16	68862107	68862107	G	A	SNP	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	missense	c.2195	p.R732Q	1.000	HMMPfam_Cadherin_C	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
CDK5RAP2	0	genome.wustl.edu	37	9	123171418	123171418	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	9	123171418	123171418	G	T	SNP	CDK5RAP2	NM_018249.4	human	genbank	58_37c	-1	reviewed	missense	c.4591	p.Q1531K	0.003	NULL	HMMPfam_Microtub_assoc	-	no_errors
CHEK2	0	genome.wustl.edu	37	22	29095912	29095912	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	22	29095912	29095912	C	G	SNP	CHEK2	NM_001005735.1	human	genbank	58_37c	-1	reviewed	missense	c.1051	p.E351Q	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_FHA,HMMSmart_SM00240,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_SMAD/FHA domain,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
CYP26A1	0	genome.wustl.edu	37	10	94836960	94836960	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	94836960	94836960	T	A	SNP	CYP26A1	NM_000783.3	human	genbank	58_37c	+1	reviewed	missense	c.1393	p.W465R	1.000	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DCDC2	0	genome.wustl.edu	37	6	24174967	24174967	+	Silent	SNP	G	G	T	rs146868469	byFrequency	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	24174967	24174967	G	T	SNP	DCDC2	NM_016356.3	human	genbank	58_37c	-1	reviewed	silent	c.1422	p.A474	0.001	NULL	HMMPfam_DCX,HMMSmart_SM00537,superfamily_Doublecortin (DC)	-	no_errors
DMPK	0	genome.wustl.edu	37	19	46283223	46283223	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	46283223	46283223	C	T	SNP	DMPK	NM_001081563.1	human	genbank	58_37c	-1	reviewed	missense	c.95	p.R32K	0.000	NULL	HMMSmart_SM00133,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
DNAH10	0	genome.wustl.edu	37	12	124298415	124298415	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	12	124298415	124298415	G	T	SNP	DNAH10	NM_207437.3	human	genbank	58_37c	+1	validated	missense	c.3382	p.D1128Y	1.000	NULL	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNHD1	0	genome.wustl.edu	37	11	6570103	6570103	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	11	6570103	6570103	C	T	SNP	DNHD1	NM_144666.2	human	genbank	58_37c	+1	provisional	missense	c.7327	p.H2443Y	0.001	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Dynein_heavy,superfamily_Ferritin-like,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNMBP	0	genome.wustl.edu	37	10	101637038	101637038	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	101637038	101637038	G	T	SNP	DNMBP	NM_015221.2	human	genbank	58_37c	-1	validated	nonsense	c.4604	p.S1535*	1.000	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_BAR,HMMSmart_SM00721,HMMPfam_SH3_2	-	no_errors
DOCK3	0	genome.wustl.edu	37	3	51417596	51417596	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	3	51417596	51417596	G	T	SNP	DOCK3	NM_004947.3	human	genbank	58_37c	+1	validated	silent	c.5541	p.L1847	1.000	NULL	HMMSmart_SH3,superfamily_SH3,HMMPfam_Ded_cyto,HMMPfam_SH3_2	-	no_errors
EML1	0	genome.wustl.edu	37	14	100364613	100364613	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	14	100364613	100364613	G	T	SNP	EML1	NM_001008707.1	human	genbank	58_37c	+1	reviewed	missense	c.928	p.V310F	1.000	HMMSmart_WD40,superfamily_WD40_like	PatternScan_HIS_ACID_PHOSPHAT_2,HMMSmart_WD40,HMMPfam_HELP,superfamily_WD40_like,PatternScan_EF_HAND_1,HMMPfam_WD40	-	no_errors
ENSG00000212413	0	genome.wustl.edu	37	10	105072247	105072247	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	105072247	105072247	C	T	SNP	ENSG00000212413	ENST00000391111	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.998	-	-	-	no_errors
ENSG00000227717	0	genome.wustl.edu	37	15	28798829	28798829	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	15	28798829	28798829	C	G	SNP	ENSG00000227717	ENST00000440738	human	ensembl	58_37c	+1	known	missense	c.61	p.L21V	0.038	NULL	NULL	-	no_errors
ENSG00000248272	0	genome.wustl.edu	37	9	135895156	135895156	+	RNA	SNP	A	T	T	rs148740450	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	9	135895156	135895156	A	T	SNP	ENSG00000248272	ENST00000506798	human	ensembl	58_37c	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
ERI3	0	genome.wustl.edu	37	1	44750563	44750563	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	44750563	44750563	G	T	SNP	ERI3	NM_024066.1	human	genbank	58_37c	-1	validated	missense	c.775	p.Q259K	1.000	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T	-	no_errors
FHL5	0	genome.wustl.edu	37	6	97058632	97058632	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	97058632	97058632	G	T	SNP	FHL5	NM_020482.4	human	genbank	58_37c	+1	reviewed	missense	c.689	p.S230I	0.921	HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_SSF57716	HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_SSF57716	-	no_errors
FLOT2	0	genome.wustl.edu	37	17	27208299	27208299	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	27208299	27208299	C	T	SNP	FLOT2	NM_004475.2	human	genbank	58_37c	-1	reviewed	missense	c.1009	p.E337K	1.000	NULL	HMMPfam_Band_7,HMMSmart_PHB	-	no_errors
FREM2	0	genome.wustl.edu	37	13	39454659	39454659	+	Missense_Mutation	SNP	G	G	A	rs149553690	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	13	39454659	39454659	G	A	SNP	FREM2	NM_207361.4	human	genbank	58_37c	+1	reviewed	missense	c.9245	p.R3082H	0.988	NULL	HMMPfam_Calx-beta,HMMSmart_SM00237	-	no_errors
GATAD2A	0	genome.wustl.edu	37	19	19603408	19603408	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	19603408	19603408	C	T	SNP	GATAD2A	NM_017660.3	human	genbank	58_37c	+1	provisional	nonsense	c.421	p.R141*	0.998	NULL	HMMPfam_GATA,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
GH2	0	genome.wustl.edu	37	17	61957710	61957710	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	61957710	61957710	G	T	SNP	GH2	NM_002059.3	human	genbank	58_37c	-1	reviewed	missense	c.625	p.R209S	1.000	HMMPfam_Hormone_1,superfamily_4-helical cytokines	HMMPfam_Hormone_1,superfamily_4-helical cytokines,PatternScan_SOMATOTROPIN_1,PatternScan_SOMATOTROPIN_2	-	no_errors
GLRA4	0	genome.wustl.edu	37	X	102968564	102968564	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	X	102968564	102968564	C	T	SNP	GLRA4	NM_001024452.2	human	genbank	58_37c	-1	validated	missense	c.967	p.A323T	1.000	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors
GPX7	0	genome.wustl.edu	37	1	53073967	53073967	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	53073967	53073967	G	T	SNP	GPX7	NM_015696.4	human	genbank	58_37c	+1	validated	missense	c.434	p.W145L	1.000	superfamily_Thiordxn-like_fd	HMMPfam_GSHPx,PatternScan_GLUTATHIONE_PEROXID_1,PatternScan_GLUTATHIONE_PEROXID_2,superfamily_Thiordxn-like_fd	-	no_errors
HCRTR2	0	genome.wustl.edu	37	6	55147109	55147109	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	55147109	55147109	C	T	SNP	HCRTR2	NM_001526.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1192	p.R398*	0.180	HMMPfam_Orexin_rec2,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,HMMPfam_Orexin_rec2,superfamily_SSF81321	-	no_errors
HDAC4	0	genome.wustl.edu	37	2	240016733	240016733	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	2	240016733	240016733	G	T	SNP	HDAC4	NM_006037.3	human	genbank	58_37c	-1	reviewed	missense	c.2238	p.F746L	0.191	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase	-	no_errors
HHATL	0	genome.wustl.edu	37	3	42740389	42740389	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	3	42740389	42740389	G	T	SNP	HHATL	NM_020707.3	human	genbank	58_37c	-1	validated	silent	c.294	p.R98	1.000	NULL	HMMPfam_MBOAT	-	no_errors
HMGN5	0	genome.wustl.edu	37	X	80371790	80371790	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	X	80371790	80371790	G	T	SNP	HMGN5	NM_030763.2	human	genbank	58_37c	-1	reviewed	silent	c.180	p.A60	0.020	HMMPfam_HMG14_17,HMMSmart_SM00527	HMMPfam_HMG14_17,HMMSmart_SM00527,PatternScan_HMG14_17	-	no_errors
HPCAL4	0	genome.wustl.edu	37	1	40150207	40150207	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	40150207	40150207	G	T	SNP	HPCAL4	NM_016257.2	human	genbank	58_37c	-1	reviewed	missense	c.69	p.S23R	1.000	superfamily_EF-hand	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
KHDRBS2	0	genome.wustl.edu	37	6	62604590	62604590	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	62604590	62604590	G	T	SNP	KHDRBS2	NM_152688.2	human	genbank	58_37c	-1	validated	missense	c.760	p.P254T	0.998	NULL	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791	-	no_errors
KIAA1967	0	genome.wustl.edu	37	8	22464825	22464825	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	8	22464825	22464825	C	G	SNP	KIAA1967	NM_021174.4	human	genbank	58_37c	+1	validated	silent	c.474	p.L158	1.000	NULL	NULL	-	no_errors
KIF5A	0	genome.wustl.edu	37	12	57975311	57975311	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	12	57975311	57975311	C	G	SNP	KIF5A	NM_004984.2	human	genbank	58_37c	+1	reviewed	missense	c.2869	p.L957V	0.354	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_Prefoldin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KPNB1	0	genome.wustl.edu	37	17	45750492	45750492	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	45750492	45750492	G	T	SNP	KPNB1	ENST00000290158	human	ensembl	58_37c	+1	known	missense	c.1656	p.L552F	0.952	superfamily_ARM repeat	HMMSmart_SM00185,HMMPfam_HEAT,HMMPfam_IBN_N,superfamily_ARM repeat	-	no_errors
LAMB3	0	genome.wustl.edu	37	1	209791254	209791254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	209791254	209791254	C	T	SNP	LAMB3	NM_000228.2	human	genbank	58_37c	-1	reviewed	missense	c.3049	p.E1017K	0.996	NULL	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Gal_bind_like,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LOC100287759	0	genome.wustl.edu	37	9	66454904	66454905	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	9	66454904	66454905	-	T	INS	LOC100287759	XM_002342919.1	human	genbank	58_37c	-1	model	frame_shift_ins	c.51_50	p.R18fs	0.045:0.055	NULL	NULL	-	no_errors
LOC100288974	0	genome.wustl.edu	37	10	81666457	81666457	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	81666457	81666457	G	T	SNP	LOC100288974	XM_002343003.1	human	genbank	58_37c	+1	model	missense	c.97	p.D33Y	0.897	NULL	NULL	-	no_errors
LOC440419	0	genome.wustl.edu	37	17	25753496	25753496	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	25753496	25753496	G	T	SNP	LOC440419	XR_040504.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
MAG	0	genome.wustl.edu	37	19	35793545	35793545	+	Missense_Mutation	SNP	G	G	A	rs34074779	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	35793545	35793545	G	A	SNP	MAG	NM_002361.2	human	genbank	58_37c	+1	reviewed	missense	c.1165	p.E389K	0.966	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_SSF48726	-	no_errors
MANBA	0	genome.wustl.edu	37	4	103578858	103578858	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	4	103578858	103578858	G	T	SNP	MANBA	NM_005908.3	human	genbank	58_37c	-1	reviewed	missense	c.1685	p.S562Y	1.000	HMMPfam_Glyco_hydro_2_C,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_2_C,superfamily_Gal_bind_like,superfamily_Glyco_hydro_cat	-	no_errors
MAP3K4	0	genome.wustl.edu	37	6	161470388	161470388	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	161470388	161470388	G	T	SNP	MAP3K4	NM_005922.2	human	genbank	58_37c	+1	reviewed	nonsense	c.1084	p.E362*	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MARK1	0	genome.wustl.edu	37	1	220825486	220825486	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	220825486	220825486	G	T	SNP	MARK1	NM_018650.3	human	genbank	58_37c	+1	validated	missense	c.1730	p.R577L	1.000	NULL	HMMPfam_UBA,HMMSmart_SM00219,HMMPfam_KA1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00165,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Kinase associated domain 1 KA1	-	no_errors
MCAM	0	genome.wustl.edu	37	11	119182249	119182249	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	11	119182249	119182249	G	T	SNP	MCAM	NM_006500.2	human	genbank	58_37c	-1	validated	silent	c.1398	p.V466	0.000	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
MED12	0	genome.wustl.edu	37	X	70345962	70345962	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	X	70345962	70345962	C	G	SNP	MED12	NM_005120.2	human	genbank	58_37c	+1	reviewed	missense	c.2499	p.F833L	1.000	NULL	HMMPfam_Med12	-	no_errors
MIR624	0	genome.wustl.edu	37	14	31483858	31483858	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	14	31483858	31483858	G	T	SNP	MIR624	ENST00000385217	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors
MPHOSPH8	0	genome.wustl.edu	37	13	20235848	20235848	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	13	20235848	20235848	G	T	SNP	MPHOSPH8	NM_017520.3	human	genbank	58_37c	+1	validated	missense	c.1802	p.G601V	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_Chromo domain-like	-	no_errors
NINL	0	genome.wustl.edu	37	20	25498423	25498423	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	20	25498423	25498423	G	T	SNP	NINL	NM_025176.4	human	genbank	58_37c	-1	validated	silent	c.243	p.R81	0.003	superfamily_SSF47473	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
OGDHL	0	genome.wustl.edu	37	10	50954843	50954843	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	10	50954843	50954843	G	T	SNP	OGDHL	NM_018245.2	human	genbank	58_37c	-1	validated	missense	c.1249	p.P417T	1.000	HMMPfam_E1_dh,superfamily_SSF52518	HMMPfam_E1_dh,HMMPfam_Transket_pyr,superfamily_SSF52518	-	no_errors
OR6B1	0	genome.wustl.edu	37	7	143701740	143701740	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	7	143701740	143701740	C	G	SNP	OR6B1	NM_001005281.1	human	genbank	58_37c	+1	provisional	silent	c.651	p.S217	0.976	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR8B3	0	genome.wustl.edu	37	11	124266647	124266647	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	11	124266647	124266647	T	C	SNP	OR8B3	NM_001005467.1	human	genbank	58_37c	-1	provisional	missense	c.601	p.I201V	0.001	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR8K1	0	genome.wustl.edu	37	11	56113597	56113597	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	11	56113597	56113597	G	A	SNP	OR8K1	NM_001002907.1	human	genbank	58_37c	+1	provisional	missense	c.83	p.G28E	0.000	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OSBPL1A	0	genome.wustl.edu	37	18	21761133	21761133	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	18	21761133	21761133	G	T	SNP	OSBPL1A	NM_080597.2	human	genbank	58_37c	-1	reviewed	silent	c.1788	p.L596	0.000	HMMPfam_Oxysterol_BP	HMMPfam_Oxysterol_BP,HMMSmart_SM00233,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,PatternScan_OSBP,superfamily_PH domain-like	-	no_errors
OSMR	0	genome.wustl.edu	37	5	38933388	38933388	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	5	38933388	38933388	G	T	SNP	OSMR	NM_003999.2	human	genbank	58_37c	+1	reviewed	missense	c.2782	p.D928Y	0.937	NULL	PatternScan_HEMATOPO_REC_L_F2,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
PARP1	0	genome.wustl.edu	37	1	226573297	226573297	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	226573297	226573297	C	T	SNP	PARP1	NM_001618.3	human	genbank	58_37c	-1	reviewed	missense	c.919	p.D307N	1.000	HMMPfam_PADR1	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,HMMPfam_zf-PARP,PatternScan_PARP_ZN_FINGER_1,HMMPfam_PARP_reg,superfamily_Domain of poly(ADP-ribose) polymerase,HMMPfam_WGR,HMMSmart_SM00773,HMMPfam_PARP,HMMPfam_PADR1,superfamily_ADP-ribosylation,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
PCDH1	0	genome.wustl.edu	37	5	141244076	141244076	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	5	141244076	141244076	T	C	SNP	PCDH1	NM_032420.2	human	genbank	58_37c	-1	reviewed	missense	c.1820	p.D607G	1.000	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin,PatternScan_GREAB_2	-	no_errors
PCDHB11	0	genome.wustl.edu	37	5	140580938	140580938	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	5	140580938	140580938	G	A	SNP	PCDHB11	NM_018931.2	human	genbank	58_37c	+1	reviewed	missense	c.1591	p.V531M	0.893	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PEX14	0	genome.wustl.edu	37	1	10596278	10596278	+	Silent	SNP	G	G	T	rs139797106	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	10596278	10596278	G	T	SNP	PEX14	NM_004565.2	human	genbank	58_37c	+1	reviewed	silent	c.93	p.T31	0.895	HMMPfam_Pex14_N	HMMPfam_Pex14_N	-	no_errors
PIAS1	0	genome.wustl.edu	37	15	68438931	68438931	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	15	68438931	68438931	G	T	SNP	PIAS1	NM_016166.1	human	genbank	58_37c	+1	reviewed	missense	c.721	p.V241L	1.000	NULL	HMMPfam_SAP,HMMSmart_SM00513,HMMPfam_zf-MIZ,superfamily_RING/U-box	-	no_errors
PIAS1	0	genome.wustl.edu	37	15	68438944	68438944	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	15	68438944	68438944	G	T	SNP	PIAS1	NM_016166.1	human	genbank	58_37c	+1	reviewed	missense	c.734	p.R245L	1.000	NULL	HMMPfam_SAP,HMMSmart_SM00513,HMMPfam_zf-MIZ,superfamily_RING/U-box	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A	rs121913273	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	3	178936082	178936082	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1624	p.E542K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POLDIP3	0	genome.wustl.edu	37	22	42992321	42992321	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	22	42992321	42992321	G	T	SNP	POLDIP3	ENST00000414913	human	ensembl	58_37c	-1	known	missense	c.488	p.P163Q	1.000	NULL	NULL	-	no_errors
PTPRK	0	genome.wustl.edu	37	6	128294905	128294905	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	6	128294905	128294905	G	T	SNP	PTPRK	NM_001135648.1	human	genbank	58_37c	-1	validated	missense	c.4055	p.P1352H	1.000	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799	HMMPfam_Y_phosphatase,HMMSmart_PTPc,HMMPfam_MAM,HMMSmart_MAM,PatternScan_MAM_1,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF48726,superfamily_SSF52799	-	no_errors
RAB3A	0	genome.wustl.edu	37	19	18309636	18309636	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	18309636	18309636	G	A	SNP	RAB3A	NM_002866.4	human	genbank	58_37c	-1	validated	missense	c.371	p.S124L	1.000	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RAPGEF2	0	genome.wustl.edu	37	4	160235812	160235812	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	4	160235812	160235812	G	T	SNP	RAPGEF2	NM_014247.2	human	genbank	58_37c	+1	validated	missense	c.262	p.D88Y	1.000	NULL	HMMPfam_RA,HMMSmart_RA,HMMPfam_cNMP_binding,HMMSmart_cNMP,HMMPfam_RasGEF_N,HMMSmart_RasGEFN,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_RasGEF,HMMSmart_RasGEF,superfamily_Ras_GEF,superfamily_cNMP_binding	-	no_errors
RBBP8	0	genome.wustl.edu	37	18	20596862	20596862	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	18	20596862	20596862	G	T	SNP	RBBP8	NM_002894.2	human	genbank	58_37c	+1	reviewed	missense	c.2429	p.G810V	1.000	HMMPfam_SAE2	HMMPfam_SAE2,HMMPfam_CtIP_N	-	no_errors
RBM18	0	genome.wustl.edu	37	9	125023778	125023778	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	9	125023778	125023778	C	T	SNP	RBM18	NR_027125.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	no_errors
RNF40	0	genome.wustl.edu	37	16	30779332	30779332	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	16	30779332	30779332	G	T	SNP	RNF40	NM_014771.2	human	genbank	58_37c	+1	reviewed	missense	c.1547	p.G516V	1.000	NULL	HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
RRM2	0	genome.wustl.edu	37	2	10269209	10269209	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	2	10269209	10269209	G	A	SNP	RRM2	NM_001034.3	human	genbank	58_37c	+1	reviewed	missense	c.945	p.M315I	1.000	HMMPfam_Ribonuc_red_sm,superfamily_Ferritin/RR_like	HMMPfam_Ribonuc_red_sm,PatternScan_RIBORED_SMALL,superfamily_Ferritin/RR_like	-	no_errors
SELP	0	genome.wustl.edu	37	1	169565174	169565174	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	169565174	169565174	G	T	SNP	SELP	NM_003005.3	human	genbank	58_37c	-1	reviewed	missense	c.2090	p.P697Q	0.108	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement control module/SCR domain,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin	-	no_errors
SLCO4A1	0	genome.wustl.edu	37	20	61297777	61297777	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	20	61297777	61297777	G	T	SNP	SLCO4A1	NM_016354.3	human	genbank	58_37c	+1	validated	missense	c.1322	p.G441V	1.000	HMMPfam_OATP,superfamily_MFS general substrate transporter	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors	-	no_errors
SMYD4	0	genome.wustl.edu	37	17	1703986	1703986	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	1703986	1703986	G	T	SNP	SMYD4	NM_052928.2	human	genbank	58_37c	-1	validated	silent	c.702	p.S234	0.667	NULL	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_TPR-like,superfamily_SET domain	-	no_errors
SORCS2	0	genome.wustl.edu	37	4	7714483	7714483	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	4	7714483	7714483	G	T	SNP	SORCS2	NM_020777.2	human	genbank	58_37c	+1	reviewed	missense	c.1892	p.R631L	1.000	HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase	HMMPfam_PKD,HMMSmart_SM00089,superfamily_PKD domain,HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase	-	no_errors
SPOCK1	0	genome.wustl.edu	37	5	136328289	136328289	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	5	136328289	136328289	G	T	SNP	SPOCK1	NM_004598.3	human	genbank	58_37c	-1	reviewed	missense	c.590	p.A197D	0.998	HMMPfam_SPARC_Ca_bdg,superfamily_SSF47473	HMMPfam_Thyroglobulin_1,HMMSmart_TY,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin_1,HMMSmart_KAZAL,HMMPfam_Kazal_2,HMMPfam_SPARC_Ca_bdg,superfamily_SSF100895,superfamily_SSF47473	-	no_errors
SPRR2C	0	genome.wustl.edu	37	1	153113044	153113044	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	1	153113044	153113044	G	T	SNP	SPRR2C	NR_003062.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.742	-	-	-	pseudogene
SPRYD3	0	genome.wustl.edu	37	12	53461956	53461956	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	12	53461956	53461956	G	T	SNP	SPRYD3	NM_032840.2	human	genbank	58_37c	-1	validated	missense	c.826	p.L276M	1.000	HMMPfam_SPRY,HMMSmart_SM00449	PatternScan_GNRH,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
SUPT6H	0	genome.wustl.edu	37	17	27002030	27002030	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	27002030	27002030	G	T	SNP	SUPT6H	NM_003170.3	human	genbank	58_37c	+1	validated	missense	c.388	p.D130Y	1.000	NULL	HMMSmart_SM00252,HMMPfam_S1,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMPfam_Tex_N,HMMSmart_SM00316,superfamily_SH2 domain	-	no_errors
TEX264	0	genome.wustl.edu	37	3	51718482	51718482	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	3	51718482	51718482	G	T	SNP	TEX264	NM_001129884.1	human	genbank	58_37c	+1	validated	missense	c.312	p.E104D	0.959	superfamily_Probable bacterial effector-binding domain	superfamily_Probable bacterial effector-binding domain	-	no_errors
TM9SF4	0	genome.wustl.edu	37	20	30729674	30729674	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	20	30729674	30729674	G	T	SNP	TM9SF4	NM_014742.3	human	genbank	58_37c	+1	validated	silent	c.504	p.R168	1.000	HMMPfam_EMP70	HMMPfam_EMP70	-	no_errors
TMEM38A	0	genome.wustl.edu	37	19	16798954	16798954	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	16798954	16798954	G	T	SNP	TMEM38A	NM_024074.1	human	genbank	58_37c	+1	provisional	splice_site	c.673-1	e6-1	1.000	-	-	-	no_errors
TMEM67	0	genome.wustl.edu	37	8	94770765	94770765	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	8	94770765	94770765	G	T	SNP	TMEM67	NM_153704.5	human	genbank	58_37c	+1	reviewed	missense	c.367	p.A123S	1.000	superfamily_Growth factor receptor domain	PatternScan_COF_1,superfamily_Growth factor receptor domain,HMMPfam_Meckelin	-	no_errors
TMPRSS9	0	genome.wustl.edu	37	19	2415770	2415770	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	2415770	2415770	C	T	SNP	TMPRSS9	NM_182973.1	human	genbank	58_37c	+1	provisional	missense	c.1574	p.S525F	0.296	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
TRBV6-8	0	genome.wustl.edu	37	7	142124249	142124249	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	7	142124249	142124249	C	A	SNP	TRBV6-8	ENST00000390376	human	ensembl	58_37c	-1	known	nonsense	c.229	p.E77*	0.920	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon:bad_bp_length_for_coding_region
ULK2	0	genome.wustl.edu	37	17	19728468	19728468	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	17	19728468	19728468	G	T	SNP	ULK2	NM_001142610.1	human	genbank	58_37c	-1	reviewed	missense	c.863	p.S288Y	0.871	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
USP7	0	genome.wustl.edu	37	16	8988471	8988471	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	16	8988471	8988471	G	T	SNP	USP7	NM_003470.2	human	genbank	58_37c	-1	validated	silent	c.3138	p.G1046	1.000	NULL	HMMPfam_UCH,HMMPfam_MATH,HMMSmart_MATH,superfamily_Traf_like,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
WDR67	0	genome.wustl.edu	37	8	124154635	124154635	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	8	124154635	124154635	G	T	SNP	WDR67	NM_145647.3	human	genbank	58_37c	+1	validated	missense	c.2774	p.R925M	0.073	NULL	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZFHX4	0	genome.wustl.edu	37	8	77765961	77765961	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	8	77765961	77765961	G	T	SNP	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	silent	c.6669	p.R2223	0.997	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF554	0	genome.wustl.edu	37	19	2834252	2834252	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	2834252	2834252	G	T	SNP	ZNF554	NM_001102651.1	human	genbank	58_37c	+1	validated	missense	c.1019	p.S340I	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF791	0	genome.wustl.edu	37	19	12738936	12738936	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	19	12738936	12738936	G	T	SNP	ZNF791	NM_153358.2	human	genbank	58_37c	+1	validated	missense	c.593	p.S198I	0.009	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNFX1	0	genome.wustl.edu	37	20	47865238	47865238	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A25A-01A-12D-A16D-09	TCGA-A2-A25A-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5739a7e1-7fa3-434c-b1c3-c0a9e570c858	ad66f1d8-3521-4acf-a50f-76c6842df466	20	47865238	47865238	G	A	SNP	ZNFX1	NM_021035.2	human	genbank	58_37c	-1	validated	silent	c.4323	p.C1441	0.268	HMMPfam_zf-NF-X1	HMMPfam_zf-NF-X1,HMMSmart_SM00438,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
