Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ATP6V0E1	8992	genome.wustl.edu	37	5	172410873	172410873	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	5	172410873	172410873	C	G	SNP	ATP6V0E1	NM_003945.3	human	genbank	58_37c	+1	reviewed	missense	c.10	p.H4D	0.000	NULL	HMMPfam_ATP_synt_H	-	no_errors
BLM	641	genome.wustl.edu	37	15	91346773	91346773	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	15	91346773	91346773	G	T	SNP	BLM	NM_000057.2	human	genbank	58_37c	+1	reviewed	missense	c.3381	p.Q1127H	1.000	HMMPfam_RQC,superfamily_SSF52540	HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HRDC,HMMSmart_HRDC,PatternScan_DEAH_ATP_HELICASE,superfamily_HRDC_like,HMMPfam_DEAD,HMMPfam_BDHCT,HMMSmart_DEXDc,HMMPfam_RQC,superfamily_SSF52540	-	no_errors
BTN1A1	696	genome.wustl.edu	37	6	26509153	26509153	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	6	26509153	26509153	C	G	SNP	BTN1A1	NM_001732.2	human	genbank	58_37c	+1	validated	missense	c.1332	p.I444M	0.981	HMMPfam_SPRY,HMMSmart_SM00449	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_SPRY,HMMSmart_SM00589,HMMPfam_V-set,HMMPfam_C2-set_2,HMMSmart_SM00449,superfamily_Immunoglobulin	-	no_errors
C11orf30	56946	genome.wustl.edu	37	11	76227289	76227289	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	11	76227289	76227289	C	G	SNP	C11orf30	NM_020193.3	human	genbank	58_37c	+1	validated	missense	c.1617	p.I539M	1.000	NULL	HMMPfam_ENT	-	no_errors
C6orf165	154313	genome.wustl.edu	37	6	88136307	88136307	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	6	88136307	88136307	G	C	SNP	C6orf165	NM_001031743.2	human	genbank	58_37c	+1	validated	missense	c.904	p.E302Q	1.000	NULL	NULL	-	no_errors
CIT	11113	genome.wustl.edu	37	12	120152115	120152115	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	12	120152115	120152115	C	T	SNP	CIT	NM_007174.1	human	genbank	58_37c	-1	validated	missense	c.4067	p.R1356H	1.000	superfamily_Cysteine-rich domain	HMMSmart_SM00133,HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_CPSASE_2,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
DEFB112	245915	genome.wustl.edu	37	6	50016314	50016314	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	6	50016314	50016314	T	C	SNP	DEFB112	NM_001037498.1	human	genbank	58_37c	-1	provisional	silent	c.51	p.S17	0.000	NULL	NULL	-	no_errors
DIP2C	22982	genome.wustl.edu	37	10	412274	412275	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	10	412274	412275	CA	-	DEL	DIP2C	NM_014974.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.2209_2208	p.A737fs	0.993:0.946	superfamily_SSF56801	HMMPfam_AMP-binding,HMMPfam_DMAP_binding,PatternScan_AMP_BINDING,superfamily_SSF56801	-	no_errors
DOPEY2	9980	genome.wustl.edu	37	21	37617884	37617884	+	Silent	SNP	C	C	T	rs112487012	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	21	37617884	37617884	C	T	SNP	DOPEY2	NM_005128.2	human	genbank	58_37c	+1	validated	silent	c.3606	p.L1202	0.221	NULL	HMMPfam_Dopey_N	-	no_errors
DSE	29940	genome.wustl.edu	37	6	116757429	116757429	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	6	116757429	116757429	G	C	SNP	DSE	NM_001080976.1	human	genbank	58_37c	+1	reviewed	missense	c.1798	p.D600H	1.000	NULL	NULL	-	no_errors
ENSG00000246367	0	genome.wustl.edu	37	7	64467029	64467029	+	RNA	SNP	G	G	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	7	64467029	64467029	G	T	SNP	ERV3	ENST00000394323	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-13625	NULL	0.007	-	-	-	no_errors
FCER1A	2205	genome.wustl.edu	37	1	159277697	159277697	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	159277697	159277697	C	T	SNP	FCER1A	NM_002001.2	human	genbank	58_37c	+1	reviewed	missense	c.749	p.P250L	0.000	NULL	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
GAS2L1	10634	genome.wustl.edu	37	22	29707827	29707827	+	Missense_Mutation	SNP	G	G	A	rs112302060	byCluster;by1000genomes	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	22	29707827	29707827	G	A	SNP	GAS2L1	ENST00000333679	human	ensembl	58_37c	+1	known	missense	c.1384	p.G462S	0.001	NULL	HMMPfam_CH,HMMSmart_SM00033,HMMPfam_GAS2,HMMSmart_SM00243,superfamily_Calponin-homology domain CH-domain	-	no_errors
IRF9	10379	genome.wustl.edu	37	14	24633978	24633978	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	14	24633978	24633978	C	T	SNP	IRF9	NM_006084.4	human	genbank	58_37c	+1	validated	nonsense	c.805	p.Q269*	0.880	superfamily_SMAD_FHA,HMMPfam_IRF-3	HMMPfam_IRF,HMMSmart_IRF,superfamily_SMAD_FHA,HMMPfam_IRF-3,PatternScan_IRF,superfamily_SSF46785	-	no_errors
KIAA0430	9665	genome.wustl.edu	37	16	15696474	15696475	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	16	15696474	15696475	-	G	INS	KIAA0430	ENST00000344181	human	ensembl	58_37c	-1	known	frame_shift_ins	c.3345_3344	p.P1116fs	0.015:0.016	NULL	HMMSmart_SM00360,HMMPfam_DUF537,superfamily_RNA-binding domain RBD	-	no_errors
KIAA1409	57578	genome.wustl.edu	37	14	94060170	94060170	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	14	94060170	94060170	G	A	SNP	KIAA1409	NM_020818.3	human	genbank	58_37c	+1	validated	missense	c.2646	p.M882I	1.000	NULL	NULL	-	no_errors
LRP2	4036	genome.wustl.edu	37	2	170060576	170060576	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	2	170060576	170060576	T	C	SNP	LRP2	NM_004525.2	human	genbank	58_37c	-1	reviewed	missense	c.7921	p.N2641D	0.777	HMMPfam_Ldl_recept_b,superfamily_SSF63825	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
LYST	1130	genome.wustl.edu	37	1	235973301	235973301	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	235973301	235973301	C	T	SNP	LYST	NM_000081.2	human	genbank	58_37c	-1	reviewed	missense	c.817	p.V273I	0.476	NULL	HMMPfam_Beach,superfamily_BEACH domain,PatternScan_COPPER_BLUE,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
MIB1	57534	genome.wustl.edu	37	18	19348649	19348649	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	18	19348649	19348649	G	C	SNP	MIB1	NM_020774.2	human	genbank	58_37c	+1	validated	missense	c.467	p.R156T	1.000	HMMPfam_MIB_HERC2	HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMSmart_RING,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_MIB_HERC2,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151919733	151919733	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	7	151919733	151919733	C	A	SNP	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	nonsense	c.3358	p.E1120*	1.000	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MMP13	4322	genome.wustl.edu	37	11	102822757	102822757	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	11	102822757	102822757	C	A	SNP	MMP13	NM_002427.3	human	genbank	58_37c	-1	reviewed	silent	c.783	p.G261	0.981	HMMPfam_Peptidase_M10,HMMSmart_ZnMc,superfamily_SSF55486	superfamily_Hemopexin,HMMPfam_Peptidase_M10,PatternScan_CYSTEINE_SWITCH,HMMPfam_PG_binding_1,superfamily_PGBD_like,PatternScan_ZINC_PROTEASE,HMMSmart_ZnMc,PatternScan_HEMOPEXIN,HMMPfam_Hemopexin,HMMSmart_HX,superfamily_SSF55486	-	no_errors
MORC4	79710	genome.wustl.edu	37	X	106205310	106205310	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	X	106205310	106205310	G	T	SNP	MORC4	NM_024657.4	human	genbank	58_37c	-1	reviewed	silent	c.1188	p.L396	0.995	NULL	HMMPfam_HATPase_c,HMMSmart_HATPase_c,superfamily_ATP_bd_ATPase,HMMPfam_zf-CW	-	no_errors
MYT1L	23040	genome.wustl.edu	37	2	1891341	1891341	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	2	1891341	1891341	C	G	SNP	MYT1L	NM_015025.2	human	genbank	58_37c	-1	validated	missense	c.2555	p.R852T	0.993	HMMPfam_MYT1	HMMPfam_zf-C2HC,HMMPfam_MYT1,PatternScan_EF_HAND_1,superfamily_SSF103637	-	no_errors
NT5C1B	93034	genome.wustl.edu	37	2	18765887	18765887	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	2	18765887	18765887	C	T	SNP	NT5C1B	NM_001002006.1	human	genbank	58_37c	-1	validated	missense	c.796	p.E266K	0.386	NULL	HMMPfam_5-nucleotidase	-	no_errors
OR2G6	391211	genome.wustl.edu	37	1	248685560	248685560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	248685560	248685560	G	A	SNP	OR2G6	NM_001013355.1	human	genbank	58_37c	+1	validated	missense	c.613	p.V205I	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR4D10	390197	genome.wustl.edu	37	11	59245266	59245266	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	11	59245266	59245266	C	T	SNP	OR4D10	NM_001004705.1	human	genbank	58_37c	+1	provisional	nonsense	c.364	p.R122*	0.463	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OSBPL8	114882	genome.wustl.edu	37	12	76778063	76778063	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	12	76778063	76778063	C	A	SNP	OSBPL8	NM_020841.4	human	genbank	58_37c	-1	reviewed	missense	c.1601	p.G534V	1.000	HMMPfam_Oxysterol_BP	HMMPfam_Oxysterol_BP,HMMPfam_PH,HMMSmart_SM00233,PatternScan_OSBP,superfamily_PH domain-like	-	no_errors
PEX19	5824	genome.wustl.edu	37	1	160251960	160251960	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	160251960	160251960	T	C	SNP	PEX19	NM_002857.3	human	genbank	58_37c	-1	reviewed	missense	c.463	p.K155E	1.000	HMMPfam_Pex19	HMMPfam_Pex19	-	no_errors
PGLYRP3	114771	genome.wustl.edu	37	1	153274985	153274985	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	153274985	153274985	C	T	SNP	PGLYRP3	NM_052891.1	human	genbank	58_37c	-1	provisional	missense	c.628	p.A210T	0.001	HMMPfam_Amidase_2,HMMSmart_Ami_2,superfamily_Amidase_2,HMMSmart_PGRP	HMMPfam_Amidase_2,HMMSmart_Ami_2,superfamily_Amidase_2,HMMSmart_PGRP	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A	rs121913273	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	3	178936082	178936082	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1624	p.E542K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PLD5	200150	genome.wustl.edu	37	1	242253277	242253277	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	242253277	242253277	G	A	SNP	PLD5	NM_152666.1	human	genbank	58_37c	-1	provisional	missense	c.1214	p.P405L	0.973	superfamily_SSF56024	HMMPfam_PLDc,HMMSmart_PLDc,HMMPfam_PLD_envelope,superfamily_SSF56024	-	no_errors
PPP2R1A	5518	genome.wustl.edu	37	19	52729060	52729060	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	19	52729060	52729060	T	G	SNP	PPP2R1A	NM_014225.5	human	genbank	58_37c	+1	reviewed	silent	c.1752	p.T584	1.000	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
SLC6A4	6532	genome.wustl.edu	37	17	28545924	28545924	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	17	28545924	28545924	G	A	SNP	SLC6A4	NM_001045.4	human	genbank	58_37c	-1	reviewed	silent	c.369	p.I123	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2,HMMPfam_5HT_transporter	-	no_errors
SNAP25	6616	genome.wustl.edu	37	20	10277623	10277623	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	20	10277623	10277623	G	C	SNP	SNAP25	NM_003081.2	human	genbank	58_37c	+1	reviewed	missense	c.332	p.G111A	1.000	HMMPfam_SNAP-25	HMMPfam_SNARE,HMMSmart_SM00397,HMMPfam_SNAP-25	-	no_errors
SQLE	6713	genome.wustl.edu	37	8	126021464	126021464	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	8	126021464	126021464	G	C	SNP	SQLE	NM_003129.3	human	genbank	58_37c	+1	reviewed	silent	c.987	p.P329	0.044	HMMPfam_SE,superfamily_SSF51905	HMMPfam_DAO,HMMPfam_SE,superfamily_SSF51905	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578190	7578190	+	Missense_Mutation	SNP	T	T	C	rs121912666	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	17	7578190	7578190	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.659	p.Y220C	0.998	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TREML1	340205	genome.wustl.edu	37	6	41121613	41121613	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	6	41121613	41121613	G	T	SNP	TREML1	NM_178174.2	human	genbank	58_37c	-1	provisional	missense	c.259	p.L87M	1.000	HMMPfam_V-set,superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
TRIM5	85363	genome.wustl.edu	37	11	5686165	5686165	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	11	5686165	5686165	G	A	SNP	TRIM5	NM_033034.2	human	genbank	58_37c	-1	reviewed	silent	c.1356	p.F452	0.923	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_SPRY,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179466427	179466427	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	2	179466427	179466427	T	C	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.47686	p.K15896E	1.000	HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
UBL4B	164153	genome.wustl.edu	37	1	110655404	110655404	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	1	110655404	110655404	A	C	SNP	UBL4B	NM_203412.1	human	genbank	58_37c	+1	validated	missense	c.248	p.H83P	0.000	superfamily_SSF54236	HMMPfam_ubiquitin,HMMSmart_UBQ,PatternScan_UBIQUITIN_1,superfamily_SSF54236	-	no_errors
WFDC5	149708	genome.wustl.edu	37	20	43739335	43739335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	20	43739335	43739335	G	A	SNP	WFDC5	NM_145652.2	human	genbank	58_37c	-1	reviewed	missense	c.167	p.P56L	0.983	HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like,PatternScan_4_DISULFIDE_CORE	HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like,PatternScan_4_DISULFIDE_CORE	-	no_errors
ZNF572	137209	genome.wustl.edu	37	8	125989495	125989495	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	8	125989495	125989495	C	G	SNP	ZNF572	NM_152412.2	human	genbank	58_37c	+1	validated	missense	c.985	p.Q329E	0.000	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF587	84914	genome.wustl.edu	37	19	58370864	58370864	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	19	58370864	58370864	C	T	SNP	ZNF587	ENST00000339656	human	ensembl	58_37c	+1	known	missense	c.1084	p.R362C	0.126	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF620	253639	genome.wustl.edu	37	3	40557522	40557522	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0JE-01A-11W-A071-09	TCGA-AO-A0JE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4f311714-ebb4-47fb-b471-62c6951d9066	f08265fa-cf7d-4d5b-a516-a319b0595cc1	3	40557522	40557522	C	G	SNP	ZNF620	NM_175888.2	human	genbank	58_37c	+1	validated	nonsense	c.437	p.S146*	0.025	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
