Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADAMTS13	0	genome.wustl.edu	37	9	136291344	136291344	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	9	136291344	136291344	A	T	SNP	ADAMTS13	NM_139025.3	human	genbank	58_37c	+1	reviewed	missense	c.565	p.N189Y	0.991	"superfamily_Metalloproteases (""zincins"") catalytic domain"	"superfamily_Spermadhesin CUB domain,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Peptidase_M10,HMMSmart_SM00608,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AGAP6	0	genome.wustl.edu	37	10	51748584	51748584	+	Missense_Mutation	SNP	A	A	G	rs75102885	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	10	51748584	51748584	A	G	SNP	AGAP6	NM_001077665.2	human	genbank	58_37c	+1	validated	missense	c.109	p.R37G	0.919	NULL	HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_PH domain-like	-	no_errors
ATP13A4	0	genome.wustl.edu	37	3	193220428	193220428	+	Missense_Mutation	SNP	C	C	A	rs146415399	byFrequency	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	3	193220428	193220428	C	A	SNP	ATP13A4	NM_032279.2	human	genbank	58_37c	-1	validated	missense	c.235	p.D79Y	1.000	NULL	HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
C1orf222	0	genome.wustl.edu	37	1	1886927	1886927	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	1886927	1886927	C	T	SNP	C1orf222	ENST00000434971	human	ensembl	58_37c	-1	known	missense	c.2212	p.V738I	0.000	NULL	NULL	-	no_errors
COL18A1	0	genome.wustl.edu	37	21	46875483	46875483	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	21	46875483	46875483	G	A	SNP	COL18A1	NM_130444.2	human	genbank	58_37c	+1	reviewed	silent	c.39	p.L13	0.999	HMMPfam_DUF959	superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF959,HMMPfam_Endostatin,superfamily_C-type lectin-like,HMMPfam_Fz,HMMSmart_SM00063	-	no_errors
COL4A4	0	genome.wustl.edu	37	2	227979409	227979409	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	2	227979409	227979409	G	A	SNP	COL4A4	NM_000092.4	human	genbank	58_37c	-1	reviewed	missense	c.493	p.H165Y	0.846	HMMPfam_Collagen	HMMPfam_C4,HMMSmart_SM00111,HMMPfam_Collagen,superfamily_C-type lectin-like	-	no_errors
CXorf40A	0	genome.wustl.edu	37	X	148628334	148628334	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	X	148628334	148628334	C	G	SNP	CXorf40A	NM_178124.4	human	genbank	58_37c	+1	validated	silent	c.303	p.P101	0.000	NULL	NULL	-	no_errors
DEFB131	0	genome.wustl.edu	37	4	9446286	9446286	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	4	9446286	9446286	A	C	SNP	DEFB131	NM_001040448.2	human	genbank	58_37c	+1	validated	silent	c.27	p.G9	0.021	NULL	NULL	-	no_errors
DNAH11	0	genome.wustl.edu	37	7	21698446	21698446	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	7	21698446	21698446	A	C	SNP	DNAH11	NM_003777.3	human	genbank	58_37c	+1	reviewed	missense	c.5140	p.T1714P	0.863	HMMPfam_DHC_N2	PatternScan_THIOL_PROTEASE_HIS,HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,PatternScan_WD_REPEATS_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAH12	0	genome.wustl.edu	37	3	57388140	57388140	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	3	57388140	57388140	G	A	SNP	DNAH12	NM_178504.4	human	genbank	58_37c	-1	validated	missense	c.6908	p.P2303L	0.000	NULL	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1252	1252	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	MT	1252	1252	G	A	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000224343	0	genome.wustl.edu	37	6	160133013	160133030	+	In_Frame_Del	DEL	CTCACACTGCTCAGACCT	CTCACACTGCTCAGACCT	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	CTCACACTGCTCAGACCT	CTCACACTGCTCAGACCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	6	160133013	160133030	CTCACACTGCTCAGACCT	-	DEL	ENSG00000224343	ENST00000442642	human	ensembl	58_37c	-1	known	in_frame_del	c.209_192	p.LSSVSG66in_frame_del	0.084:0.080:0.075:0.070:0.064:0.058:0.051:0.044:0.037:0.029:0.021:0.013:0.011:0.009:0.006:0.006:0.005:0.008	NULL	NULL	-	no_start_codon
ENSG00000237706	0	genome.wustl.edu	37	11	89719142	89719143	+	Nonsense_Mutation	DNP	CC	CC	AG	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	CC	CC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	11	89719142	89719143	CC	AG	DNP	ENSG00000237706	ENST00000452934	human	ensembl	58_37c	-1	known	nonsense	c.763_762	p.RGVY254S*	0.043:0.048	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_SPRY,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
ERCC6L	0	genome.wustl.edu	37	X	71426994	71426994	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	X	71426994	71426994	G	A	SNP	ERCC6L	NM_017669.2	human	genbank	58_37c	-1	validated	silent	c.1623	p.V541	0.960	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
GINS3	0	genome.wustl.edu	37	16	58438557	58438557	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	16	58438557	58438557	G	T	SNP	GINS3	NM_001126129.1	human	genbank	58_37c	+1	reviewed	missense	c.692	p.G231V	1.000	NULL	HMMPfam_Psf3	-	no_errors
GOLGA6L5	0	genome.wustl.edu	37	15	85055683	85055683	+	RNA	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	15	85055683	85055683	C	T	SNP	GOLGA6L5	NR_003246.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.079	-	-	-	pseudogene
IDE	0	genome.wustl.edu	37	10	94235707	94235707	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	10	94235707	94235707	C	G	SNP	IDE	NM_004969.3	human	genbank	58_37c	-1	reviewed	missense	c.1929	p.K643N	1.000	superfamily_Metalloenz_metal-bd	PatternScan_INSULINASE,HMMPfam_Peptidase_M16_C,superfamily_Metalloenz_metal-bd,HMMPfam_Peptidase_M16	-	no_errors
IKBKAP	0	genome.wustl.edu	37	9	111674571	111674572	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	9	111674571	111674572	AG	-	DEL	IKBKAP	NM_003640.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1162_1161	p.L388fs	0.949:1.000	HMMPfam_IKI3,superfamily_Amine_DH_B_like	HMMPfam_IKI3,superfamily_Amine_DH_B_like	-	no_errors
INHA	0	genome.wustl.edu	37	2	220437229	220437229	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	2	220437229	220437229	G	A	SNP	INHA	NM_002191.2	human	genbank	58_37c	+1	reviewed	missense	c.133	p.A45T	0.000	NULL	HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1,superfamily_Cystine-knot cytokines	-	no_errors
KRTAP10-7	0	genome.wustl.edu	37	21	46020656	46020670	+	In_Frame_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	21	46020656	46020670	CTGCTGCGCCCCCAG	-	DEL	KRTAP10-7	ENST00000380102	human	ensembl	58_37c	+1	known	in_frame_del	c.135_149	p.PSCCA49in_frame_del	0.132:0.261:0.989:1.000:1.000:0.990:0.713:0.752:0.994:0.999:1.000:1.000:1.000:0.996:0.995	NULL	HMMPfam_Keratin_B2	-	no_errors
LAP3	0	genome.wustl.edu	37	4	17585198	17585198	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	4	17585198	17585198	G	C	SNP	LAP3	NM_015907.2	human	genbank	58_37c	+1	validated	missense	c.472	p.G158R	0.999	HMMPfam_Peptidase_M17_N,superfamily_Macro domain-like	HMMPfam_Peptidase_M17,PatternScan_CYTOSOL_AP,HMMPfam_Peptidase_M17_N,superfamily_Macro domain-like,superfamily_Zn-dependent exopeptidases	-	no_errors
LOC100288669	0	genome.wustl.edu	37	1	16861562	16861562	+	RNA	SNP	A	C	C	rs2991726	byCluster	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	16861562	16861562	A	C	SNP	LOC100288669	XR_078219.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.002	-	-	-	pseudogene
LOC100288792	0	genome.wustl.edu	37	1	233190018	233190018	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	233190018	233190018	G	T	SNP	LOC100288792	XM_002342175.1	human	genbank	58_37c	+1	model	nonsense	c.967	p.E323*	1.000	NULL	NULL	-	no_errors
LOC284685	0	genome.wustl.edu	37	1	166245047	166245048	+	RNA	DEL	TC	TC	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	166245047	166245048	TC	-	DEL	LOC284685	XR_017685.3	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000:1.000	-	-	-	pseudogene
LOC642373	0	genome.wustl.edu	37	9	40293174	40293174	+	RNA	SNP	G	G	A	rs61583160	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	9	40293174	40293174	G	A	SNP	LOC642373	XR_078402.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.439	-	-	-	no_errors
LOC729176	0	genome.wustl.edu	37	6	147124876	147124876	+	RNA	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	6	147124876	147124876	C	T	SNP	LOC729176	NR_003954.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.078	-	-	-	pseudogene
MANEA	0	genome.wustl.edu	37	6	96053674	96053674	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	6	96053674	96053674	C	T	SNP	MANEA	NM_024641.2	human	genbank	58_37c	+1	validated	missense	c.782	p.A261V	0.000	NULL	NULL	-	no_errors
MAP4K1	0	genome.wustl.edu	37	19	39087977	39087977	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	19	39087977	39087977	G	A	SNP	MAP4K1	NM_007181.4	human	genbank	58_37c	-1	validated	missense	c.1826	p.A609V	0.039	HMMPfam_CNH,HMMSmart_CNH	HMMPfam_CNH,HMMSmart_CNH,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAPKAPK2	0	genome.wustl.edu	37	1	206858675	206858676	+	In_Frame_Ins	INS	-	-	GCC	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	206858675	206858676	-	GCC	INS	MAPKAPK2	NM_032960.2	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.101_102	p.38in_frame_insP	0.000:0.960	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MED20	0	genome.wustl.edu	37	6	41874991	41874991	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	6	41874991	41874991	C	T	SNP	MED20	NM_004275.3	human	genbank	58_37c	-1	validated	missense	c.458	p.C153Y	1.000	HMMPfam_TATA_RF	HMMPfam_TATA_RF	-	no_errors
MYH8	0	genome.wustl.edu	37	17	10318441	10318441	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	17	10318441	10318441	A	G	SNP	MYH8	NM_002472.2	human	genbank	58_37c	-1	reviewed	missense	c.797	p.I266T	1.000	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYO3A	0	genome.wustl.edu	37	10	26459429	26459429	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	10	26459429	26459429	A	C	SNP	MYO3A	NM_017433.4	human	genbank	58_37c	+1	reviewed	missense	c.3359	p.D1120A	0.056	superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF52540	-	no_errors
NAIF1	0	genome.wustl.edu	37	9	130825802	130825802	+	Missense_Mutation	SNP	G	G	A	rs138010554	byFrequency	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	9	130825802	130825802	G	A	SNP	NAIF1	NM_197956.3	human	genbank	58_37c	-1	validated	missense	c.889	p.R297C	1.000	NULL	NULL	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16912133	16912133	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	16912133	16912133	G	A	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	missense	c.839	p.S280F	0.004	NULL	HMMPfam_DUF1220	-	no_errors
NCOR2	0	genome.wustl.edu	37	12	124824721	124824722	+	In_Frame_Ins	INS	-	-	GCCGCTGCT	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	12	124824721	124824722	-	GCCGCTGCT	INS	NCOR2	NM_006312.3	human	genbank	58_37c	-1	validated	in_frame_ins	c.5539_5538	p.1846in_frame_insSSG	1.000:0.999	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
NEK5	0	genome.wustl.edu	37	13	52693487	52693487	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	13	52693487	52693487	G	A	SNP	NEK5	NM_199289.1	human	genbank	58_37c	-1	provisional	missense	c.182	p.P61L	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NFXL1	0	genome.wustl.edu	37	4	47877233	47877233	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	4	47877233	47877233	C	A	SNP	NFXL1	NM_152995.4	human	genbank	58_37c	-1	validated	missense	c.2157	p.L719F	1.000	HMMPfam_zf-NF-X1,HMMSmart_SM00438	HMMPfam_zf-NF-X1,HMMSmart_SM00438,PatternScan_ZF_PHD_1,superfamily_RING/U-box	-	no_errors
NLK	0	genome.wustl.edu	37	17	26370119	26370136	+	In_Frame_Del	DEL	GCAGCCGCAGCAGCGGCT	GCAGCCGCAGCAGCGGCT	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	GCAGCCGCAGCAGCGGCT	GCAGCCGCAGCAGCGGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	17	26370119	26370136	GCAGCCGCAGCAGCGGCT	-	DEL	NLK	NM_016231.4	human	genbank	58_37c	+1	validated	in_frame_del	c.220_237	p.AAAAAA77in_frame_del	1.000:1.000:0.979:1.000:1.000:1.000:1.000:1.000:0.960:1.000:1.000:0.977:1.000:1.000:0.995:1.000:1.000:0.999	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NLK	0	genome.wustl.edu	37	17	26370124	26370124	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	17	26370124	26370124	C	T	SNP	NLK	NM_016231.4	human	genbank	58_37c	+1	validated	silent	c.225	p.A75	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
OR11H12	0	genome.wustl.edu	37	14	19377859	19377859	+	Missense_Mutation	SNP	T	T	C	rs150290074	byFrequency	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	14	19377859	19377859	T	C	SNP	OR11H12	NM_001013354.1	human	genbank	58_37c	+1	provisional	missense	c.266	p.V89A	0.108	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4F17	0	genome.wustl.edu	37	19	111016	111016	+	Missense_Mutation	SNP	T	G	G	rs71245814	byFrequency	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	19	111016	111016	T	G	SNP	OR4F17	NM_001005240.1	human	genbank	58_37c	+1	provisional	missense	c.338	p.F113C	0.999	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PDE3A	0	genome.wustl.edu	37	12	20801709	20801709	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	12	20801709	20801709	T	A	SNP	PDE3A	NM_000921.3	human	genbank	58_37c	+1	validated	missense	c.2653	p.F885I	1.000	HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_HDc,superfamily_SSF109604	-	no_errors
PLXNB1	0	genome.wustl.edu	37	3	48459737	48459737	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	3	48459737	48459737	A	T	SNP	PLXNB1	NM_001130082.1	human	genbank	58_37c	-1	validated	missense	c.3085	p.C1029S	1.000	HMMPfam_PSI,HMMSmart_SM00423	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain,HMMPfam_PSI,PatternScan_LIPOCALIN,HMMPfam_TIG,HMMSmart_SM00429,PatternScan_IG_MHC,HMMSmart_SM00423,superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl,superfamily_E set domains,superfamily_Plexin repeat	-	no_errors
PTPRB	0	genome.wustl.edu	37	12	70946687	70946687	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	12	70946687	70946687	C	A	SNP	PTPRB	NM_001109754.1	human	genbank	58_37c	-1	reviewed	nonsense	c.5257	p.E1753*	1.000	HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Ricin_B_lectin,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Ricin B-like lectins,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RBBP4	0	genome.wustl.edu	37	1	33117549	33117549	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	33117549	33117549	C	T	SNP	RBBP4	ENST00000401893	human	ensembl	58_37c	+1	known	missense	c.113	p.S38L	1.000	NULL	superfamily_WD40 repeat-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
RGPD3	0	genome.wustl.edu	37	2	107032319	107032319	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	2	107032319	107032319	A	T	SNP	RGPD3	NM_001144013.1	human	genbank	58_37c	-1	validated	missense	c.5051	p.M1684K	1.000	NULL	HMMPfam_Ran_BP1,HMMSmart_RanBD,HMMPfam_GRIP,HMMSmart_Grip,HMMPfam_TPR_1,superfamily_SSF48452,superfamily_SSF50729	-	no_errors
SCN1A	0	genome.wustl.edu	37	2	166909415	166909415	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	2	166909415	166909415	G	T	SNP	SCN1A	NM_006920.4	human	genbank	58_37c	-1	reviewed	missense	c.641	p.A214E	1.000	HMMPfam_Ion_trans,superfamily_SSF81324	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,PatternScan_RIBONUCLEASE_P,superfamily_SSF81324	-	no_errors
SFTPC	0	genome.wustl.edu	37	8	22021060	22021061	+	Splice_Site	DEL	GT	GT	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	GT	GT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	8	22021060	22021061	GT	-	DEL	SFTPC	NM_003018.3	human	genbank	58_37c	+1	reviewed	splice_site_del	c.435+1_435+1	e4+1	1.000:0.997	-	-	-	no_errors
SKIL	0	genome.wustl.edu	37	3	170078924	170078924	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	3	170078924	170078924	C	G	SNP	SKIL	NM_005414.3	human	genbank	58_37c	+1	validated	missense	c.805	p.L269V	0.932	superfamily_SAND domain-like,HMMPfam_c-SKI_SMAD_bind	HMMPfam_Ski_Sno,superfamily_Putative DNA-binding domain,superfamily_SAND domain-like,HMMPfam_c-SKI_SMAD_bind	-	no_errors
STOX1	0	genome.wustl.edu	37	10	70644582	70644582	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	10	70644582	70644582	G	C	SNP	STOX1	NM_001130161.2	human	genbank	58_37c	+1	reviewed	missense	c.1030	p.V344L	1.000	NULL	HMMPfam_Stork_head	-	no_errors
TPTE	0	genome.wustl.edu	37	21	10951293	10951293	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	21	10951293	10951293	T	C	SNP	TPTE	NM_199261.2	human	genbank	58_37c	-1	validated	missense	c.419	p.D140G	0.997	superfamily_Voltage-gated potassium channels	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II,superfamily_Voltage-gated potassium channels	-	no_errors
TTC7A	0	genome.wustl.edu	37	2	47202156	47202156	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	2	47202156	47202156	C	T	SNP	TTC7A	NM_020458.2	human	genbank	58_37c	+1	validated	missense	c.562	p.R188C	0.995	superfamily_TPR-like	HMMPfam_TPR_1,HMMPfam_TPR_2,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
TTN	0	genome.wustl.edu	37	2	179448488	179448488	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	2	179448488	179448488	G	C	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.57711	p.C19237W	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TYRP1	0	genome.wustl.edu	37	9	12702372	12702372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	9	12702372	12702372	G	A	SNP	TYRP1	NM_000550.2	human	genbank	58_37c	+1	reviewed	missense	c.1015	p.V339I	1.000	HMMPfam_Tyrosinase,superfamily_Di-copper_centre	HMMPfam_Tyrosinase,PatternScan_TYROSINASE_1,PatternScan_TYROSINASE_2,superfamily_Di-copper_centre	-	no_errors
YEATS2	0	genome.wustl.edu	37	3	183493744	183493746	+	In_Frame_Del	DEL	GGA	GGA	-	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	GGA	GGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	3	183493744	183493746	GGA	-	DEL	YEATS2	NM_018023.4	human	genbank	58_37c	+1	validated	in_frame_del	c.2410_2412	p.G807in_frame_del	0.095:0.259:0.259	NULL	HMMPfam_YEATS	-	no_errors
ZNF425	0	genome.wustl.edu	37	7	148801215	148801215	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	7	148801215	148801215	G	T	SNP	ZNF425	NM_001001661.2	human	genbank	58_37c	-1	validated	missense	c.1748	p.A583E	0.000	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF425	0	genome.wustl.edu	37	7	148802311	148802311	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	7	148802311	148802311	A	C	SNP	ZNF425	NM_001001661.2	human	genbank	58_37c	-1	validated	missense	c.652	p.C218G	0.000	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF496	0	genome.wustl.edu	37	1	247492666	247492666	+	Missense_Mutation	SNP	C	C	A	rs146923642	byFrequency	TCGA-AR-A24Z-01A-11D-A167-09	TCGA-AR-A24Z-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c11f2060-d3fb-4e3d-8058-b8cce44af519	e7976863-3bbf-42ac-b272-ccd7ca5bf679	1	247492666	247492666	C	A	SNP	ZNF496	NM_032752.1	human	genbank	58_37c	-1	provisional	missense	c.215	p.R72L	0.677	HMMPfam_SCAN,HMMSmart_SCAN	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
