Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AMAC1L3	0	genome.wustl.edu	37	17	7386217	7386217	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	17	7386217	7386217	T	C	SNP	AMAC1L3	NM_001102614.1	human	genbank	58_37c	+1	provisional	missense	c.914	p.V305A	0.997	HMMPfam_DUF6,superfamily_SSF103481	HMMPfam_DUF6,superfamily_SSF103481	-	no_errors
AMPD3	0	genome.wustl.edu	37	11	10500146	10500146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	11	10500146	10500146	C	T	SNP	AMPD3	NM_000480.2	human	genbank	58_37c	+1	reviewed	missense	c.322	p.P108S	0.005	NULL	HMMPfam_A_deaminase,PatternScan_A_DEAMINASE,superfamily_SSF51556	-	no_errors
ANKHD1-EIF4EBP3	0	genome.wustl.edu	37	5	139909280	139909295	+	Frame_Shift_Del	DEL	TGGGTAACTCAGTGCT	TGGGTAACTCAGTGCT	-	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	TGGGTAACTCAGTGCT	TGGGTAACTCAGTGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	5	139909280	139909295	TGGGTAACTCAGTGCT	-	DEL	ANKHD1-EIF4EBP3	NM_020690.4	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.6749_6764	p.G2251fs	1.000:0.999:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.994:1.000:1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791	-	no_errors
AQP8	0	genome.wustl.edu	37	16	25228619	25228619	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	16	25228619	25228619	G	T	SNP	AQP8	NM_001169.2	human	genbank	58_37c	+1	reviewed	missense	c.113	p.C38F	0.997	HMMPfam_MIP,superfamily_MIP	HMMPfam_MIP,PatternScan_MIP,superfamily_MIP	-	no_errors
ARHGEF9	0	genome.wustl.edu	37	X	62917053	62917053	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	X	62917053	62917053	G	A	SNP	ARHGEF9	NM_015185.2	human	genbank	58_37c	-1	reviewed	silent	c.513	p.N171	1.000	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	-	no_errors
B3GALT5	0	genome.wustl.edu	37	21	41032794	41032794	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	21	41032794	41032794	C	T	SNP	B3GALT5	NM_006057.1	human	genbank	58_37c	+1	reviewed	missense	c.308	p.A103V	0.000	HMMPfam_Galactosyl_T	HMMPfam_Galactosyl_T	-	no_errors
BAI2	0	genome.wustl.edu	37	1	32202284	32202286	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	32202284	32202286	AAG	-	DEL	BAI2	NM_001703.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.3020_3018	p.F1007in_frame_del	1.000:1.000:1.000	HMMPfam_7tm_2	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008	-	no_errors
BCAT1	0	genome.wustl.edu	37	12	24989509	24989509	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	12	24989509	24989509	G	A	SNP	BCAT1	NM_005504.6	human	genbank	58_37c	-1	reviewed	missense	c.839	p.P280L	1.000	HMMPfam_Aminotran_4,superfamily_Aminotrans_IV,PatternScan_AA_TRANSFER_CLASS_4	HMMPfam_Aminotran_4,superfamily_Aminotrans_IV,PatternScan_AA_TRANSFER_CLASS_4	-	no_errors
BCORL1	0	genome.wustl.edu	37	X	129155089	129155089	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	X	129155089	129155089	C	A	SNP	BCORL1	NM_021946.3	human	genbank	58_37c	+1	reviewed	missense	c.3571	p.Q1191K	1.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
BRPF1	0	genome.wustl.edu	37	3	9783057	9783057	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	3	9783057	9783057	T	G	SNP	BRPF1	NM_001003694.1	human	genbank	58_37c	+1	reviewed	missense	c.1788	p.H596Q	0.640	NULL	HMMPfam_PWWP,HMMSmart_PWWP,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMSmart_PHD,PatternScan_ZINC_FINGER_C2H2_1,superfamily_FYVE_PHD_ZnF,HMMSmart_ZnF_C2H2,HMMPfam_EPL1,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SSF63748	-	no_errors
C11orf24	0	genome.wustl.edu	37	11	68030078	68030078	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	11	68030078	68030078	C	T	SNP	C11orf24	NM_022338.3	human	genbank	58_37c	-1	validated	missense	c.385	p.A129T	0.006	NULL	PatternScan_ALDOKETO_REDUCTASE_3	-	no_errors
C17orf75	0	genome.wustl.edu	37	17	30665245	30665245	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	17	30665245	30665245	G	A	SNP	C17orf75	NM_022344.2	human	genbank	58_37c	-1	validated	missense	c.473	p.S158F	1.000	NULL	NULL	-	no_errors
C1orf9	0	genome.wustl.edu	37	1	172526472	172526472	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	172526472	172526472	C	T	SNP	C1orf9	NM_014283.3	human	genbank	58_37c	+1	validated	nonsense	c.496	p.Q166*	0.998	NULL	superfamily_Galactose-binding domain-like,HMMPfam_Sad1_UNC	-	no_errors
C2orf51	0	genome.wustl.edu	37	2	88826006	88826006	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	2	88826006	88826006	G	A	SNP	C2orf51	NM_152670.2	human	genbank	58_37c	+1	validated	silent	c.111	p.T37	0.000	NULL	NULL	-	no_errors
CSF2RB	0	genome.wustl.edu	37	22	37326821	37326821	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	22	37326821	37326821	G	A	SNP	CSF2RB	NM_000395.2	human	genbank	58_37c	+1	reviewed	missense	c.961	p.V321I	0.010	superfamily_Fibronectin type III	PatternScan_HEMATOPO_REC_S_F1,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
CUBN	0	genome.wustl.edu	37	10	16916414	16916414	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	10	16916414	16916414	C	G	SNP	CUBN	NM_001081.3	human	genbank	58_37c	-1	reviewed	silent	c.9195	p.L3065	0.045	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	PatternScan_ASX_HYDROXYL,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
CYP4V2	0	genome.wustl.edu	37	4	187130348	187130348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	4	187130348	187130348	C	T	SNP	CYP4V2	NM_207352.3	human	genbank	58_37c	+1	reviewed	missense	c.1327	p.R443W	0.696	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DENND2D	0	genome.wustl.edu	37	1	111739850	111739850	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	111739850	111739850	G	A	SNP	DENND2D	NM_024901.3	human	genbank	58_37c	-1	provisional	missense	c.452	p.P151L	1.000	HMMPfam_DENN,HMMSmart_SM00799	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800	-	no_errors
ENSG00000198886	0	genome.wustl.edu	37	MT	10858	10858	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	MT	10858	10858	T	C	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	silent	c.99	p.I33	NULL	HMMPfam_Oxidored_q5_N	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000215273	0	genome.wustl.edu	37	4	17875736	17875738	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	4	17875736	17875738	CTC	-	DEL	ENSG00000215273	ENST00000399906	human	ensembl	58_37c	-1	known	in_frame_del	c.971_969	p.R324in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors
GALNTL4	0	genome.wustl.edu	37	11	11394113	11394113	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	11	11394113	11394113	C	T	SNP	GALNTL4	NM_198516.2	human	genbank	58_37c	-1	validated	silent	c.1041	p.L347	1.000	superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
HSPH1	0	genome.wustl.edu	37	13	31714438	31714438	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	13	31714438	31714438	C	A	SNP	HSPH1	NM_006644.2	human	genbank	58_37c	-1	validated	missense	c.1863	p.M621I	1.000	HMMPfam_HSP70,superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain	HMMPfam_HSP70,PatternScan_HSP70_3,superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain,superfamily_Heat shock protein 70kD (HSP70) C-terminal subdomain,superfamily_Actin-like ATPase domain	-	no_errors
HTR6	0	genome.wustl.edu	37	1	19992948	19992948	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	19992948	19992948	G	A	SNP	HTR6	NM_000871.1	human	genbank	58_37c	+1	provisional	silent	c.702	p.S234	0.928	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
KDM2A	0	genome.wustl.edu	37	11	66999078	66999078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	11	66999078	66999078	G	A	SNP	KDM2A	NM_012308.2	human	genbank	58_37c	+1	reviewed	missense	c.1126	p.E376K	0.997	NULL	HMMPfam_F-box,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00558,PatternScan_2FE2S_FER_1,HMMSmart_SM00367,HMMPfam_JmjC,PatternScan_ZF_PHD_1,superfamily_Clavaminate synthase-like,superfamily_RNI-like	-	no_errors
KIAA1715	0	genome.wustl.edu	37	2	176812363	176812363	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	2	176812363	176812363	T	A	SNP	KIAA1715	NM_030650.1	human	genbank	58_37c	-1	validated	missense	c.551	p.N184I	0.940	NULL	HMMPfam_DUF2296	-	no_errors
KRTAP4-7	0	genome.wustl.edu	37	17	39240627	39240627	+	Missense_Mutation	SNP	T	T	C	rs189343211	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	17	39240627	39240627	T	C	SNP	KRTAP4-7	ENST00000377731	human	ensembl	58_37c	+1	known	missense	c.169	p.S57P	0.032	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
KRTAP4-9	0	genome.wustl.edu	37	17	39261786	39261786	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	17	39261786	39261786	G	A	SNP	KRTAP4-9	XM_002343553.1	human	genbank	58_37c	+1	model	missense	c.127	p.A43T	1.000	NULL	NULL	-	no_errors
L1CAM	0	genome.wustl.edu	37	X	153130895	153130895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	X	153130895	153130895	G	A	SNP	L1CAM	NM_000425.3	human	genbank	58_37c	-1	reviewed	missense	c.2608	p.H870Y	0.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LOC100132314	0	genome.wustl.edu	37	1	120905049	120905049	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	120905049	120905049	G	T	SNP	LOC100132314	XM_001721393.2	human	genbank	58_37c	-1	model	missense	c.23	p.S8Y	1.000	NULL	NULL	-	no_errors
LOC642633	0	genome.wustl.edu	37	22	18667696	18667696	+	RNA	SNP	G	G	C	rs148013419	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	22	18667696	18667696	G	C	SNP	LOC642633	XR_038149.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.001	-	-	-	pseudogene
LOC649489	0	genome.wustl.edu	37	2	107557506	107557506	+	RNA	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	2	107557506	107557506	C	T	SNP	LOC649489	XR_037265.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LRRC37A4	0	genome.wustl.edu	37	17	43592301	43592301	+	RNA	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	17	43592301	43592301	G	A	SNP	LRRC37A4	NR_002940.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	pseudogene
MKRN3	0	genome.wustl.edu	37	15	23811029	23811029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	15	23811029	23811029	G	A	SNP	MKRN3	NM_005664.3	human	genbank	58_37c	+1	reviewed	missense	c.100	p.V34I	0.000	NULL	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
MLC1	0	genome.wustl.edu	37	22	50512644	50512644	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	22	50512644	50512644	C	T	SNP	MLC1	NM_015166.3	human	genbank	58_37c	-1	reviewed	splice_site	c.714+1	e7+1	1.000	-	-	-	no_errors
MMAA	0	genome.wustl.edu	37	4	146576496	146576496	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	4	146576496	146576496	T	G	SNP	MMAA	NM_172250.2	human	genbank	58_37c	+1	reviewed	missense	c.1167	p.I389M	0.998	NULL	HMMPfam_ArgK,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MTERFD2	0	genome.wustl.edu	37	2	242038987	242038987	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	2	242038987	242038987	A	C	SNP	MTERFD2	NM_182501.3	human	genbank	58_37c	-1	validated	missense	c.344	p.V115G	0.001	HMMPfam_mTERF	HMMPfam_mTERF,HMMSmart_SM00733	-	no_errors
MUC17	0	genome.wustl.edu	37	7	100679631	100679631	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	7	100679631	100679631	G	A	SNP	MUC17	NM_001040105.1	human	genbank	58_37c	+1	provisional	missense	c.4934	p.S1645N	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_EGF_1,superfamily_EGF/Laminin,superfamily_SEA domain	-	no_errors
NOL12	0	genome.wustl.edu	37	22	38083918	38083918	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	22	38083918	38083918	G	A	SNP	NOL12	NM_024313.2	human	genbank	58_37c	+1	validated	missense	c.85	p.E29K	1.000	HMMPfam_Nop25	HMMPfam_Nop25	-	no_errors
NOTO	0	genome.wustl.edu	37	2	73438003	73438003	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	2	73438003	73438003	C	A	SNP	NOTO	NM_001134462.1	human	genbank	58_37c	+1	provisional	missense	c.702	p.S234R	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	-	no_errors
NT5E	0	genome.wustl.edu	37	6	86181085	86181085	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	6	86181085	86181085	G	T	SNP	NT5E	NM_002526.2	human	genbank	58_37c	+1	validated	missense	c.693	p.Q231H	1.000	HMMPfam_Metallophos,superfamily_SSF56300	HMMPfam_Metallophos,PatternScan_5_NUCLEOTIDASE_1,PatternScan_5_NUCLEOTIDASE_2,HMMPfam_5_nucleotid_C,superfamily_5apos-Nucleotdase_C,superfamily_SSF56300	-	no_errors
NUAK2	0	genome.wustl.edu	37	1	205275345	205275345	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	205275345	205275345	C	A	SNP	NUAK2	NM_030952.1	human	genbank	58_37c	-1	provisional	missense	c.661	p.V221F	0.995	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
OLFM2	0	genome.wustl.edu	37	19	9967532	9967532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	19	9967532	9967532	C	T	SNP	OLFM2	NM_058164.2	human	genbank	58_37c	-1	provisional	missense	c.638	p.R213H	1.000	HMMPfam_OLF,HMMSmart_OLF	HMMPfam_OLF,HMMSmart_OLF	-	no_errors
PPEF1	0	genome.wustl.edu	37	X	18824526	18824526	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	X	18824526	18824526	G	A	SNP	PPEF1	NM_006240.2	human	genbank	58_37c	+1	reviewed	silent	c.1257	p.V419	1.000	HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases	HMMPfam_IQ,HMMSmart_SM00015,HMMSmart_SM00054,HMMPfam_Metallophos,HMMSmart_SM00156,PatternScan_SER_THR_PHOSPHATASE,HMMPfam_PPP5,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Metallo-dependent phosphatases	-	no_errors
PPP1R3A	0	genome.wustl.edu	37	7	113558745	113558745	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	7	113558745	113558745	C	A	SNP	PPP1R3A	NM_002711.3	human	genbank	58_37c	-1	reviewed	nonsense	c.307	p.E103*	1.000	NULL	HMMPfam_CBM_21	-	no_errors
PRKDC	0	genome.wustl.edu	37	8	48697854	48697855	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	8	48697854	48697855	-	T	INS	PRKDC	ENST00000314191	human	ensembl	58_37c	-1	known	frame_shift_ins	c.10924_10923	p.H3641fs	0.979:0.107	NULL	HMMPfam_HEAT,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),HMMPfam_NUC194,superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PRSS53	0	genome.wustl.edu	37	16	31097783	31097783	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	16	31097783	31097783	G	A	SNP	PRSS53	NM_001039503.2	human	genbank	58_37c	-1	validated	missense	c.538	p.R180C	1.000	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
RIT1	0	genome.wustl.edu	37	1	155874570	155874570	+	Silent	SNP	A	A	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	155874570	155874570	A	T	SNP	RIT1	NM_006912.4	human	genbank	58_37c	-1	validated	silent	c.189	p.R63	0.964	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RRP1	0	genome.wustl.edu	37	21	45222330	45222330	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	21	45222330	45222330	G	A	SNP	RRP1	ENST00000400387	human	ensembl	58_37c	+1	known	nonsense	c.1185	p.W395*	0.001	NULL	HMMPfam_Nop52	-	no_errors
SASS6	0	genome.wustl.edu	37	1	100573002	100573002	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	100573002	100573002	C	A	SNP	SASS6	NM_194292.1	human	genbank	58_37c	-1	validated	missense	c.1254	p.K418N	1.000	NULL	NULL	-	no_errors
SCYL2	0	genome.wustl.edu	37	12	100732846	100732846	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	12	100732846	100732846	A	T	SNP	SCYL2	NM_017988.4	human	genbank	58_37c	+1	provisional	missense	c.2686	p.M896L	0.993	NULL	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,HMMPfam_Pkinase	-	no_errors
SHROOM4	0	genome.wustl.edu	37	X	50377358	50377358	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	X	50377358	50377358	C	T	SNP	SHROOM4	NM_020717.3	human	genbank	58_37c	-1	reviewed	missense	c.1715	p.G572E	0.024	NULL	HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_ASD2,HMMPfam_ASD1	-	no_errors
STAT4	0	genome.wustl.edu	37	2	191895699	191895700	+	Frame_Shift_Del	DEL	GC	GC	-	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	GC	GC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	2	191895699	191895700	GC	-	DEL	STAT4	NM_003151.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.2219_2218	p.A740fs	1.000:1.000	NULL	HMMPfam_SH2,HMMSmart_SH2,superfamily_P53_like_DNA_bnd,HMMPfam_STAT_int,superfamily_STAT,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_SSF55550	-	no_errors
SYT11	0	genome.wustl.edu	37	1	155851077	155851077	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	1	155851077	155851077	C	A	SNP	SYT11	NM_152280.4	human	genbank	58_37c	+1	reviewed	silent	c.1074	p.I358	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
TAS2R42	0	genome.wustl.edu	37	12	11338943	11338943	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	12	11338943	11338943	G	T	SNP	TAS2R42	NM_181429.1	human	genbank	58_37c	-1	provisional	missense	c.601	p.L201I	0.000	HMMPfam_TAS2R,superfamily_SSF81321	HMMPfam_TAS2R,superfamily_SSF81321	-	no_errors
TBC1D1	0	genome.wustl.edu	37	4	38029467	38029467	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	4	38029467	38029467	T	C	SNP	TBC1D1	ENST00000510573	human	ensembl	58_37c	+1	known	missense	c.211	p.S71P	0.992	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,PatternScan_LECTIN_LEGUME_BETA	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TBC1D4	0	genome.wustl.edu	37	13	75880582	75880582	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	13	75880582	75880582	T	G	SNP	TBC1D4	NM_014832.2	human	genbank	58_37c	-1	validated	missense	c.2619	p.R873S	1.000	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
TMCO6	0	genome.wustl.edu	37	5	140022616	140022616	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	5	140022616	140022616	A	C	SNP	TMCO6	NM_018502.3	human	genbank	58_37c	+1	provisional	missense	c.796	p.I266L	1.000	HMMSmart_SM00185,superfamily_ARM repeat	HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
TMEM120A	0	genome.wustl.edu	37	7	75617758	75617758	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	7	75617758	75617758	G	A	SNP	TMEM120A	NM_031925.2	human	genbank	58_37c	-1	validated	missense	c.454	p.R152C	1.000	HMMPfam_TMPIT	HMMPfam_TMPIT	-	pseudogene
TP53	0	genome.wustl.edu	37	17	7577144	7577144	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	17	7577144	7577144	A	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.794	p.L265P	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
UBAC2	0	genome.wustl.edu	37	13	99890758	99890758	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	13	99890758	99890758	T	C	SNP	UBAC2	NM_001144072.1	human	genbank	58_37c	+1	validated	missense	c.109	p.C37R	1.000	NULL	HMMPfam_UBA,superfamily_UBA-like,HMMSmart_SM00165	-	no_errors
USP20	0	genome.wustl.edu	37	9	132630665	132630667	+	In_Frame_Del	DEL	GAC	GAC	-	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	GAC	GAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	9	132630665	132630667	GAC	-	DEL	USP20	NM_001008563.3	human	genbank	58_37c	+1	validated	in_frame_del	c.1072_1074	p.D359in_frame_del	0.330:0.308:0.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,HMMPfam_zf-UBP,HMMSmart_DUSP,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
VCPIP1	0	genome.wustl.edu	37	8	67578547	67578547	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	8	67578547	67578547	T	G	SNP	VCPIP1	NM_025054.4	human	genbank	58_37c	-1	validated	missense	c.647	p.D216A	1.000	HMMPfam_OTU	HMMPfam_OTU	-	no_errors
ZBTB11	0	genome.wustl.edu	37	3	101375072	101375072	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	3	101375072	101375072	G	C	SNP	ZBTB11	NM_014415.3	human	genbank	58_37c	-1	validated	missense	c.2067	p.I689M	0.999	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMSmart_BTB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF366	0	genome.wustl.edu	37	5	71739680	71739680	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	5	71739680	71739680	G	T	SNP	ZNF366	NM_152625.1	human	genbank	58_37c	-1	provisional	missense	c.2138	p.S713Y	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF562	0	genome.wustl.edu	37	19	9770066	9770066	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	19	9770066	9770066	T	C	SNP	ZNF562	NM_001130031.1	human	genbank	58_37c	-1	validated	missense	c.103	p.N35D	0.000	superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF607	0	genome.wustl.edu	37	19	38189031	38189031	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A1KN-01A-11D-A13L-09	TCGA-B6-A1KN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c1ad09c8-4237-48f0-b04c-7ee8ccaf8cf1	2a8d9494-2d88-4577-bb21-05a62a07d8f9	19	38189031	38189031	A	G	SNP	ZNF607	NM_032689.4	human	genbank	58_37c	-1	validated	silent	c.2001	p.H667	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
