Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AFF1	4299	genome.wustl.edu	37	4	87968539	87968539	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	4	87968539	87968539	C	T	SNP	AFF1	NM_005935.2	human	genbank	58_37c	+1	validated	silent	c.831	p.P277	0.000	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
ATN1	1822	genome.wustl.edu	37	12	7045918	7045918	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	12	7045918	7045918	G	T	SNP	ATN1	NM_001007026.1	human	genbank	58_37c	+1	reviewed	missense	c.1488	p.Q496H	0.381	HMMPfam_Atrophin-1	HMMPfam_Atrophin-1	-	no_errors
BCL9L	283149	genome.wustl.edu	37	11	118778200	118778200	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	11	118778200	118778200	G	T	SNP	BCL9L	NM_182557.2	human	genbank	58_37c	-1	validated	missense	c.524	p.A175D	1.000	NULL	PatternScan_RIBOSOMAL_S6E	-	no_errors
CSRNP1	64651	genome.wustl.edu	37	3	39184985	39184985	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	39184985	39184985	T	C	SNP	CSRNP1	NM_033027.3	human	genbank	58_37c	-1	reviewed	missense	c.1331	p.Y444C	0.019	NULL	NULL	-	no_errors
DENND4B	9909	genome.wustl.edu	37	1	153916788	153916788	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	1	153916788	153916788	G	A	SNP	DENND4B	NM_014856.2	human	genbank	58_37c	-1	validated	silent	c.63	p.N21	0.954	NULL	HMMPfam_DENN,HMMSmart_DENN,HMMPfam_PPR,HMMPfam_dDENN,HMMSmart_dDENN,HMMPfam_uDENN,HMMSmart_uDENN	-	no_errors
EIF2A	83939	genome.wustl.edu	37	3	150301029	150301029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	150301029	150301029	G	A	SNP	EIF2A	NM_032025.3	human	genbank	58_37c	+1	validated	missense	c.1669	p.G557R	0.996	NULL	superfamily_WD40 repeat-like,HMMPfam_eIF2A	-	no_errors
ENSG00000245670	0	genome.wustl.edu	37	17	73774845	73774845	+	RNA	SNP	A	A	C	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	17	73774845	73774845	A	C	SNP	H3F3B	NM_005324.3	human	genbank	58_37c	-1	reviewed	intronic	c.283-41	e3-41	0.000	-	-	-	no_errors
GLIPR1	11010	genome.wustl.edu	37	12	75875683	75875683	+	Missense_Mutation	SNP	C	C	T	rs138690767	byFrequency	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	12	75875683	75875683	C	T	SNP	GLIPR1	NM_006851.2	human	genbank	58_37c	+1	reviewed	missense	c.244	p.R82W	0.000	HMMSmart_SCP,HMMPfam_SCP,superfamily_SCP-like_extracellular	HMMSmart_SCP,HMMPfam_SCP,superfamily_SCP-like_extracellular,PatternScan_CRISP_1,PatternScan_CRISP_2	-	no_errors
GPR50	9248	genome.wustl.edu	37	X	150349052	150349052	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	X	150349052	150349052	C	T	SNP	GPR50	NM_004224.3	human	genbank	58_37c	+1	reviewed	missense	c.997	p.R333C	0.043	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_TRYPSIN_HIS,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GRIN2A	2903	genome.wustl.edu	37	16	9923469	9923469	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	16	9923469	9923469	C	T	SNP	GRIN2A	NM_000833.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1818	p.W606*	1.000	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
GRLF1	2909	genome.wustl.edu	37	19	47492898	47492898	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	47492898	47492898	G	A	SNP	GRLF1	NM_004491.4	human	genbank	58_37c	+1	reviewed	silent	c.4002	p.P1334	0.000	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_FF,HMMSmart_SM00441,superfamily_GTPase activation domain GAP,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LINGO1	84894	genome.wustl.edu	37	15	77907723	77907723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	15	77907723	77907723	C	T	SNP	LINGO1	NM_032808.5	human	genbank	58_37c	-1	validated	missense	c.526	p.D176N	1.000	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
LOC646360	646360	genome.wustl.edu	37	10	37626659	37626659	+	RNA	SNP	G	G	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	10	37626659	37626659	G	T	SNP	LOC646360	XR_078419.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
MAGI2	9863	genome.wustl.edu	37	7	78636505	78636505	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	7	78636505	78636505	C	T	SNP	MAGI2	NM_012301.3	human	genbank	58_37c	-1	reviewed	missense	c.319	p.D107N	1.000	HMMSmart_SM00072	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MLL	4297	genome.wustl.edu	37	11	118371701	118371701	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	11	118371701	118371701	G	A	SNP	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	splice_site	c.6150-1	e25-1	1.000	-	-	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151878893	151878894	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	7	151878893	151878894	-	A	INS	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.6052_6051	p.Q2017fs	1.000:0.997	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
NFKB2	4791	genome.wustl.edu	37	10	104158032	104158032	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	10	104158032	104158032	C	T	SNP	NFKB2	NM_001077494.1	human	genbank	58_37c	+1	validated	missense	c.830	p.S277F	1.000	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains	PatternScan_REL_1,HMMPfam_Death,HMMSmart_SM00005,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_TIG,HMMSmart_SM00429,superfamily_p53-like transcription factors,superfamily_DEATH domain,HMMPfam_RHD,superfamily_E set domains	-	no_errors
OR10J5	127385	genome.wustl.edu	37	1	159505444	159505444	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	1	159505444	159505444	C	T	SNP	OR10J5	NM_001004469.1	human	genbank	58_37c	-1	provisional	missense	c.354	p.M118I	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PCDHGC3	5098	genome.wustl.edu	37	5	140856115	140856115	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	5	140856115	140856115	T	G	SNP	PCDHGC3	NM_002588.2	human	genbank	58_37c	+1	reviewed	missense	c.432	p.I144M	1.000	HMMPfam_Cadherin,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936092	178936092	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	178936092	178936092	A	C	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1634	p.E545A	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PLCB4	5332	genome.wustl.edu	37	20	9417740	9417740	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	20	9417740	9417740	G	T	SNP	PLCB4	NM_000933.3	human	genbank	58_37c	+1	reviewed	missense	c.2669	p.S890I	1.000	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMPfam_DUF1154,HMMPfam_efhand_like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
PLXNB3	5365	genome.wustl.edu	37	X	153041490	153041490	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	X	153041490	153041490	C	T	SNP	PLXNB3	NM_005393.2	human	genbank	58_37c	+1	reviewed	missense	c.4550	p.T1517M	1.000	superfamily_Rho_GAP,HMMPfam_Plexin_cytopl	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_IPT,HMMSmart_PSI,superfamily_Rho_GAP,HMMPfam_Plexin_cytopl,superfamily_Ig_E-set,superfamily_Plexin-like_fold	-	no_errors
PXK	54899	genome.wustl.edu	37	3	58398643	58398643	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	58398643	58398643	G	A	SNP	PXK	NM_017771.3	human	genbank	58_37c	+1	provisional	missense	c.1481	p.S494N	1.000	NULL	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,HMMPfam_WH2,superfamily_Protein kinase-like (PK-like)	-	no_errors
RBM10	8241	genome.wustl.edu	37	X	47028870	47028870	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	X	47028870	47028870	C	T	SNP	RBM10	NM_005676.3	human	genbank	58_37c	+1	reviewed	silent	c.174	p.D58	0.981	NULL	HMMPfam_G-patch,HMMSmart_SM00443,HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_RNA-binding domain RBD,superfamily_Znf265 first zinc-finger domain	-	no_errors
RPL5	6125	genome.wustl.edu	37	1	93299205	93299211	+	Frame_Shift_Del	DEL	TATCATT	TATCATT	-	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	TATCATT	TATCATT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	1	93299205	93299211	TATCATT	-	DEL	RPL5	NM_000969.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.177_183	p.I60fs	0.998:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_Ribosomal_L18p,superfamily_Translational machinery components	HMMPfam_Ribosomal_L18p,superfamily_Translational machinery components	-	no_errors
THSD7B	80731	genome.wustl.edu	37	2	138425422	138425422	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	2	138425422	138425422	A	G	SNP	THSD7B	NM_001080427.1	human	genbank	58_37c	+1	provisional	missense	c.4643	p.Y1548C	1.000	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	-	no_errors
TSC22D1	8848	genome.wustl.edu	37	13	45148301	45148301	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	13	45148301	45148301	G	T	SNP	TSC22D1	NM_183422.2	human	genbank	58_37c	-1	validated	missense	c.1910	p.S637Y	0.509	NULL	HMMPfam_TSC22,PatternScan_TSC22	-	no_errors
TUBD1	51174	genome.wustl.edu	37	17	57958454	57958454	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	17	57958454	57958454	G	A	SNP	TUBD1	NM_016261.2	human	genbank	58_37c	-1	validated	missense	c.338	p.P113L	1.000	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like	HMMPfam_Tubulin,superfamily_Tubulin C-terminal domain-like,PatternScan_TUBULIN,superfamily_Tubulin nucleotide-binding domain-like	-	no_errors
WIZ	58525	genome.wustl.edu	37	19	15559037	15559037	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	15559037	15559037	C	T	SNP	WIZ	NM_021241.2	human	genbank	58_37c	-1	validated	missense	c.82	p.E28K	0.354	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
ZCCHC14	23174	genome.wustl.edu	37	16	87446722	87446722	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	16	87446722	87446722	G	A	SNP	ZCCHC14	NM_015144.2	human	genbank	58_37c	-1	validated	silent	c.1272	p.S424	0.964	NULL	HMMPfam_SAM_1,superfamily_PX domain,HMMPfam_zf-CCHC,HMMSmart_SM00343,superfamily_SAM/Pointed domain	-	no_errors
ZNF812	729648	genome.wustl.edu	37	19	9801784	9801784	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	9801784	9801784	A	G	SNP	ZNF812	XM_001726949.2	human	genbank	58_37c	-1	model	missense	c.176	p.I59T	0.001	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
