Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC5	0	genome.wustl.edu	37	3	183677527	183677527	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	3	183677527	183677527	C	T	SNP	ABCC5	NM_005688.2	human	genbank	58_37c	-1	reviewed	missense	c.2476	p.E826K	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
APBB1	0	genome.wustl.edu	37	11	6417361	6417361	+	Missense_Mutation	SNP	G	G	A	rs144100830	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	11	6417361	6417361	G	A	SNP	APBB1	NM_001164.2	human	genbank	58_37c	-1	reviewed	missense	c.1757	p.A586V	1.000	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
APOB	0	genome.wustl.edu	37	2	21226147	21226147	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	21226147	21226147	A	G	SNP	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	silent	c.12147	p.D4049	0.018	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
C9orf51	0	genome.wustl.edu	37	9	38527727	38527727	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	9	38527727	38527727	C	T	SNP	C9orf51	ENST00000377689	human	ensembl	58_37c	+1	known	missense	c.634	p.P212S	0.002	NULL	NULL	-	no_errors
CCDC107	0	genome.wustl.edu	37	9	35660615	35660615	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	9	35660615	35660615	G	A	SNP	CCDC107	NM_174923.1	human	genbank	58_37c	+1	provisional	silent	c.381	p.L127	0.999	NULL	NULL	-	no_errors
CCDC74B	0	genome.wustl.edu	37	2	130897469	130897469	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	130897469	130897469	C	T	SNP	CCDC74B	ENST00000409488	human	ensembl	58_37c	-1	known	missense	c.695	p.R232K	0.982	NULL	NULL	-	no_errors
CD177	0	genome.wustl.edu	37	19	43864435	43864435	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	19	43864435	43864435	G	A	SNP	CD177	NM_020406.2	human	genbank	58_37c	+1	validated	missense	c.638	p.R213Q	0.000	NULL	HMMPfam_UPAR_LY6,superfamily_Snake toxin-like	-	pseudogene
CDH8	0	genome.wustl.edu	37	16	61935083	61935083	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	16	61935083	61935083	C	A	SNP	CDH8	NM_001796.2	human	genbank	58_37c	-1	reviewed	missense	c.547	p.G183C	1.000	HMMPfam_Cadherin,superfamily_Cadherin	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CDK5RAP1	0	genome.wustl.edu	37	20	31967344	31967344	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	20	31967344	31967344	G	A	SNP	CDK5RAP1	NM_016408.2	human	genbank	58_37c	-1	reviewed	silent	c.1030	p.L344	1.000	HMMSmart_SM00729,HMMPfam_Radical_SAM,superfamily_Radical SAM enzymes	HMMPfam_TRAM,PatternScan_UPF0004,HMMSmart_SM00729,HMMPfam_Radical_SAM,HMMPfam_UPF0004,superfamily_Radical SAM enzymes	-	no_errors
CPNE8	0	genome.wustl.edu	37	12	39161456	39161456	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	12	39161456	39161456	G	A	SNP	CPNE8	NM_153634.2	human	genbank	58_37c	-1	reviewed	nonsense	c.556	p.R186*	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,HMMSmart_VWA,superfamily_C2_CaLB,HMMPfam_Copine,superfamily_SSF53300	-	no_errors
CSPG5	0	genome.wustl.edu	37	3	47610685	47610685	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	3	47610685	47610685	T	A	SNP	CSPG5	NM_006574.3	human	genbank	58_37c	-1	validated	missense	c.1415	p.D472V	1.000	HMMPfam_Neural_ProG_Cyt	HMMSmart_EGF,HMMPfam_Neural_ProG_Cyt,HMMPfam_Chon_Sulph_att	-	no_errors
CYP2F1	0	genome.wustl.edu	37	19	41627364	41627364	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	19	41627364	41627364	C	T	SNP	CYP2F1	NM_000774.3	human	genbank	58_37c	+1	reviewed	silent	c.486	p.G162	0.025	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DBC1	0	genome.wustl.edu	37	9	121971044	121971044	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	9	121971044	121971044	G	A	SNP	DBC1	NM_014618.2	human	genbank	58_37c	-1	validated	silent	c.1098	p.L366	1.000	NULL	HMMSmart_SM00457	-	no_errors
DCST2	0	genome.wustl.edu	37	1	154995617	154995617	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	1	154995617	154995617	G	A	SNP	DCST2	NM_144622.2	human	genbank	58_37c	-1	validated	missense	c.2081	p.S694L	0.002	NULL	HMMPfam_DC_STAMP	-	no_errors
DLX2	0	genome.wustl.edu	37	2	172967226	172967226	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	172967226	172967226	G	A	SNP	DLX2	NM_004405.3	human	genbank	58_37c	-1	reviewed	missense	c.41	p.S14L	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
DNAJB5	0	genome.wustl.edu	37	9	34996381	34996381	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	9	34996381	34996381	T	C	SNP	DNAJB5	NM_001135005.1	human	genbank	58_37c	+1	validated	missense	c.547	p.F183L	1.000	superfamily_Chaperone J-domain	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain,HMMPfam_DnaJ_C,superfamily_HSP40/DnaJ peptide-binding domain,PatternScan_DNAJ_1	-	no_errors
DOK1	0	genome.wustl.edu	37	2	74783592	74783592	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	74783592	74783592	G	C	SNP	DOK1	NM_001381.2	human	genbank	58_37c	+1	reviewed	missense	c.797	p.R266T	0.004	NULL	HMMPfam_PH,HMMSmart_SM00233,HMMPfam_IRS,HMMSmart_SM00310,superfamily_PH domain-like	-	no_errors
ENSG00000202474	0	genome.wustl.edu	37	9	66458154	66458155	+	RNA	INS	-	-	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	9	66458154	66458155	-	T	INS	ENSG00000202474	ENST00000365604	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.044:0.046	-	-	-	no_errors
ENSG00000210077	0	genome.wustl.edu	37	MT	1606	1606	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	MT	1606	1606	G	A	SNP	ENSG00000210077	ENST00000387342	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000221474	0	genome.wustl.edu	37	3	122000727	122000728	+	RNA	DEL	AT	AT	-	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	3	122000727	122000728	AT	-	DEL	ENSG00000221474	ENST00000408547	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
ENSG00000248857	0	genome.wustl.edu	37	X	118221704	118221704	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	X	118221704	118221704	C	T	SNP	ENSG00000248857	ENST00000440399	human	ensembl	58_37c	-1	known	missense	c.1708	p.E570K	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
EYS	0	genome.wustl.edu	37	6	64431555	64431555	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	6	64431555	64431555	A	G	SNP	EYS	NM_001142800.1	human	genbank	58_37c	-1	reviewed	missense	c.8372	p.V2791A	0.999	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FAM171B	0	genome.wustl.edu	37	2	187626830	187626830	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	187626830	187626830	C	G	SNP	FAM171B	NM_177454.3	human	genbank	58_37c	+1	validated	silent	c.1761	p.P587	1.000	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FAM76B	0	genome.wustl.edu	37	11	95520814	95520814	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	11	95520814	95520814	C	T	SNP	FAM76B	NM_144664.4	human	genbank	58_37c	-1	validated	missense	c.181	p.A61T	1.000	NULL	NULL	-	no_errors
FLJ42393	0	genome.wustl.edu	37	3	187896827	187896828	+	RNA	DEL	AG	AG	-	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	3	187896827	187896828	AG	-	DEL	FLJ42393	NR_024413.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.013:0.016	-	-	-	no_errors
GBP7	0	genome.wustl.edu	37	1	89630428	89630428	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	1	89630428	89630428	C	T	SNP	GBP7	NM_207398.2	human	genbank	58_37c	-1	validated	missense	c.304	p.G102S	0.994	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_GBP_C,HMMPfam_GBP,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
GJA3	0	genome.wustl.edu	37	13	20717290	20717290	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	13	20717290	20717290	G	A	SNP	GJA3	NM_021954.3	human	genbank	58_37c	-1	reviewed	silent	c.138	p.G46	0.137	HMMPfam_Connexin,HMMSmart_SM00037	HMMPfam_Connexin,HMMSmart_SM00037,PatternScan_CONNEXINS_1,PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC	-	no_errors
GNB2	0	genome.wustl.edu	37	7	100276323	100276323	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	7	100276323	100276323	C	T	SNP	GNB2	NM_005273.3	human	genbank	58_37c	+1	reviewed	missense	c.922	p.L308F	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
GTF3C1	0	genome.wustl.edu	37	16	27556779	27556779	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	16	27556779	27556779	T	A	SNP	GTF3C1	NM_001520.3	human	genbank	58_37c	-1	validated	missense	c.287	p.D96V	1.000	HMMPfam_B-block_TFIIIC	HMMPfam_B-block_TFIIIC	-	no_errors
HERC2	0	genome.wustl.edu	37	15	28387403	28387403	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	15	28387403	28387403	G	C	SNP	HERC2	NM_004667.4	human	genbank	58_37c	-1	reviewed	missense	c.11681	p.P3894R	1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_Cyt-b5,superfamily_Cytochrome b5-like heme/steroid binding domain,HMMSmart_SM00706,superfamily_Galactose-binding domain-like,superfamily_RCC1/BLIP-II,HMMPfam_MIB_HERC2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
HGF	0	genome.wustl.edu	37	7	81334803	81334803	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	7	81334803	81334803	C	T	SNP	HGF	NM_000601.4	human	genbank	58_37c	-1	reviewed	missense	c.1913	p.G638E	1.000	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_PAN_1,HMMSmart_SM00473,superfamily_Trypsin-like serine proteases,superfamily_Kringle-like,PatternScan_KRINGLE_1,superfamily_Hairpin loop containing domain-like	-	no_errors
HLA-H	0	genome.wustl.edu	37	6	29857858	29857860	+	RNA	DEL	AGA	AGA	-	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	6	29857858	29857860	AGA	-	DEL	HLA-H	NR_001434.2	human	genbank	58_37c	+1	reviewed	rna	NULL	NULL	0.001:0.000:0.001	-	-	-	pseudogene
HRNR	0	genome.wustl.edu	37	1	152186443	152186443	+	Silent	SNP	A	A	G	rs140336724	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	1	152186443	152186443	A	G	SNP	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	silent	c.7662	p.H2554	0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
KIAA1797	0	genome.wustl.edu	37	9	20990142	20990142	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	9	20990142	20990142	G	A	SNP	KIAA1797	NM_017794.3	human	genbank	58_37c	+1	validated	silent	c.5025	p.L1675	1.000	NULL	superfamily_ARM-type_fold	-	no_errors
LBX1	0	genome.wustl.edu	37	10	102987344	102987344	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	10	102987344	102987344	G	T	SNP	LBX1	NM_006562.4	human	genbank	58_37c	-1	reviewed	missense	c.529	p.R177S	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
LILRB1	0	genome.wustl.edu	37	19	55148052	55148052	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	19	55148052	55148052	C	A	SNP	LILRB1	NM_001081637.1	human	genbank	58_37c	+1	reviewed	missense	c.1761	p.F587L	0.000	NULL	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	-	no_errors
LOC100130746	0	genome.wustl.edu	37	5	24171217	24171217	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	5	24171217	24171217	G	A	SNP	LOC100130746	XR_038810.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC100287259	0	genome.wustl.edu	37	7	100275339	100275339	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	7	100275339	100275339	C	G	SNP	LOC100287259	XM_002342776.1	human	genbank	58_37c	-1	model	silent	c.669	p.R223	0.000	NULL	NULL	-	no_errors
LOC100289581	0	genome.wustl.edu	37	10	135491077	135491077	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	10	135491077	135491077	G	A	SNP	LOC100289581	XM_002343041.1	human	genbank	58_37c	+1	model	missense	c.688	p.G230S	0.994	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	-	pseudogene
LTV1	0	genome.wustl.edu	37	6	144183272	144183272	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	6	144183272	144183272	G	A	SNP	LTV1	NM_032860.3	human	genbank	58_37c	+1	provisional	missense	c.955	p.E319K	0.993	HMMPfam_LTV	HMMPfam_LTV	-	no_errors
LY86	0	genome.wustl.edu	37	6	6589046	6589046	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	6	6589046	6589046	T	G	SNP	LY86	NM_004271.3	human	genbank	58_37c	+1	validated	missense	c.79	p.W27G	0.983	NULL	HMMPfam_E1_DerP2_DerF2,HMMSmart_ML	-	no_errors
MICAL2	0	genome.wustl.edu	37	11	12245016	12245016	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	11	12245016	12245016	C	T	SNP	MICAL2	NM_014632.2	human	genbank	58_37c	+1	provisional	missense	c.1508	p.S503L	0.988	superfamily_Calponin-homology domain CH-domain	HMMPfam_CH,HMMSmart_SM00033,HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_FAD_binding_3,superfamily_Calponin-homology domain CH-domain,superfamily_FAD/NAD(P)-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
MTTP	0	genome.wustl.edu	37	4	100532382	100532382	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	4	100532382	100532382	A	G	SNP	MTTP	NM_000253.2	human	genbank	58_37c	+1	reviewed	missense	c.1852	p.T618A	0.994	NULL	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_Lipid_transp_b-sht_shell,superfamily_LV_superhelical	-	no_errors
MYLK2	0	genome.wustl.edu	37	20	30409483	30409483	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	20	30409483	30409483	G	A	SNP	MYLK2	NM_033118.3	human	genbank	58_37c	+1	reviewed	missense	c.715	p.E239K	0.907	NULL	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16892256	16892256	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	1	16892256	16892256	T	A	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	missense	c.2888	p.Q963L	0.001	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors
NCOR2	0	genome.wustl.edu	37	12	124824739	124824740	+	Frame_Shift_Ins	INS	-	-	GCCG	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	12	124824739	124824740	-	GCCG	INS	NCOR2	NM_006312.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.5521_5520	p.S1840fs	1.000:1.000	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
NFATC2	0	genome.wustl.edu	37	20	50051765	50051765	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	20	50051765	50051765	C	G	SNP	NFATC2	NM_173091.2	human	genbank	58_37c	-1	reviewed	missense	c.1992	p.K664N	0.999	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains	HMMPfam_TIG,HMMSmart_SM00429,superfamily_p53-like transcription factors,HMMPfam_RHD,superfamily_E set domains	-	no_errors
NUS1	0	genome.wustl.edu	37	6	117996896	117996896	+	Silent	SNP	G	T	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	6	117996896	117996896	G	T	SNP	NUS1	NM_138459.3	human	genbank	58_37c	+1	validated	silent	c.63	p.T21	1.000	NULL	superfamily_Undecaprenyl diphosphate synthase	-	no_errors
OR4Q3	0	genome.wustl.edu	37	14	20216391	20216391	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	14	20216391	20216391	G	A	SNP	OR4Q3	NM_172194.1	human	genbank	58_37c	+1	provisional	missense	c.805	p.D269N	0.975	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDH15	0	genome.wustl.edu	37	10	55587197	55587197	+	Silent	SNP	A	A	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	10	55587197	55587197	A	C	SNP	PCDH15	NM_001142763.1	human	genbank	58_37c	-1	reviewed	silent	c.4338	p.P1446	0.413	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G	rs121913279	byCluster	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
RBP1	0	genome.wustl.edu	37	3	139258365	139258365	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	3	139258365	139258365	C	T	SNP	RBP1	NM_002899.3	human	genbank	58_37c	-1	reviewed	missense	c.196	p.D66N	1.000	superfamily_Lipocalins	PatternScan_FABP,HMMPfam_Lipocalin,superfamily_Lipocalins	-	no_errors
RGS16	0	genome.wustl.edu	37	1	182569504	182569504	+	Missense_Mutation	SNP	G	G	A	rs149776657	byFrequency	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	1	182569504	182569504	G	A	SNP	RGS16	NM_002928.3	human	genbank	58_37c	-1	reviewed	missense	c.532	p.R178W	0.032	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS	-	no_errors
SETD1A	0	genome.wustl.edu	37	16	30975564	30975564	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	16	30975564	30975564	C	T	SNP	SETD1A	NM_014712.1	human	genbank	58_37c	+1	provisional	silent	c.789	p.F263	1.000	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SET,HMMSmart_SET,HMMSmart_PostSET,superfamily_SSF54928,superfamily_SSF82199	-	no_errors
SGSM3	0	genome.wustl.edu	37	22	40802535	40802535	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	22	40802535	40802535	G	C	SNP	SGSM3	NM_015705.4	human	genbank	58_37c	+1	validated	missense	c.1054	p.G352R	1.000	superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_RUN,HMMSmart_SM00593	-	no_errors
SIGLEC8	0	genome.wustl.edu	37	19	51961352	51961352	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	19	51961352	51961352	T	C	SNP	SIGLEC8	NM_014442.2	human	genbank	58_37c	-1	validated	missense	c.290	p.Q97R	0.003	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
SLC6A5	0	genome.wustl.edu	37	11	20676303	20676303	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	11	20676303	20676303	C	G	SNP	SLC6A5	NM_004211.3	human	genbank	58_37c	+1	reviewed	missense	c.2283	p.F761L	1.000	NULL	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
SLIT2	0	genome.wustl.edu	37	4	20490503	20490503	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	4	20490503	20490503	C	T	SNP	SLIT2	NM_004787.1	human	genbank	58_37c	+1	provisional	missense	c.673	p.R225C	1.000	HMMSmart_SM00082,superfamily_L domain-like	PatternScan_ASX_HYDROXYL,HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00282,HMMSmart_SM00179,HMMSmart_SM00369,HMMSmart_SM00274,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_SM00365,superfamily_L domain-like,superfamily_EGF/Laminin	-	no_errors
SS18	0	genome.wustl.edu	37	18	23619391	23619391	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	18	23619391	23619391	G	C	SNP	SS18	NM_001007559.1	human	genbank	58_37c	-1	validated	missense	c.637	p.Q213E	1.000	NULL	HMMPfam_SSXT	-	no_errors
TMCC3	0	genome.wustl.edu	37	12	94975411	94975411	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	12	94975411	94975411	C	G	SNP	TMCC3	NM_020698.2	human	genbank	58_37c	-1	validated	missense	c.982	p.E328Q	1.000	HMMPfam_Tmemb_cc2	HMMPfam_Tmemb_cc2	-	no_errors
TP53	0	genome.wustl.edu	37	17	7577120	7577120	+	Missense_Mutation	SNP	C	C	A	rs28934576	byCluster	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	17	7577120	7577120	C	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.818	p.R273L	0.864	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TTN	0	genome.wustl.edu	37	2	179426582	179426582	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	179426582	179426582	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.76567	p.E25523K	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
UPK1A	0	genome.wustl.edu	37	19	36164378	36164378	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	19	36164378	36164378	G	C	SNP	UPK1A	NM_007000.2	human	genbank	58_37c	+1	reviewed	silent	c.399	p.L133	1.000	superfamily_Tetraspanin,HMMPfam_Tetraspannin	superfamily_Tetraspanin,HMMPfam_Tetraspannin	-	no_errors
WASH2P	0	genome.wustl.edu	37	2	114353977	114353977	+	RNA	SNP	A	G	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	114353977	114353977	A	G	SNP	WASH2P	NR_024077.2	human	genbank	58_37c	+1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
WDYHV1	0	genome.wustl.edu	37	8	124442245	124442245	+	Missense_Mutation	SNP	C	C	G	rs142035420	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	8	124442245	124442245	C	G	SNP	WDYHV1	NM_018024.1	human	genbank	58_37c	+1	provisional	missense	c.206	p.A69G	1.000	HMMPfam_WDYHV	HMMPfam_WDYHV	-	no_errors
XIRP2	0	genome.wustl.edu	37	2	168107692	168107692	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	2	168107692	168107692	A	G	SNP	XIRP2	NM_152381.4	human	genbank	58_37c	+1	validated	missense	c.9790	p.K3264E	0.998	NULL	HMMPfam_Xin	-	no_errors
ZNF302	0	genome.wustl.edu	37	19	35173717	35173717	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A26W-01A-11D-A16D-09	TCGA-C8-A26W-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d3db354e-f22c-4576-a7d7-6515f1c11002	327119a0-07dd-46c3-8b02-733bfaa5f959	19	35173717	35173717	T	A	SNP	ZNF302	NM_001012320.1	human	genbank	58_37c	+1	validated	missense	c.45	p.H15Q	0.996	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
