Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AMHR2	0	genome.wustl.edu	37	12	53825208	53825208	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	12	53825208	53825208	G	A	SNP	AMHR2	NM_020547.2	human	genbank	58_37c	+1	reviewed	missense	c.1673	p.G558D	0.007	NULL	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,superfamily_Snake toxin-like	-	no_errors
ATXN2L	0	genome.wustl.edu	37	16	28844531	28844531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	16	28844531	28844531	C	T	SNP	ATXN2L	NM_148414.1	human	genbank	58_37c	+1	reviewed	missense	c.1811	p.S604L	0.011	NULL	HMMPfam_LsmAD,HMMPfam_PAM2	-	no_errors
BCO2	0	genome.wustl.edu	37	11	112064318	112064318	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	11	112064318	112064318	C	T	SNP	BCO2	NM_031938.4	human	genbank	58_37c	+1	validated	nonsense	c.415	p.R139*	1.000	HMMPfam_RPE65	HMMPfam_RPE65	-	no_errors
C20orf195	0	genome.wustl.edu	37	20	62187465	62187465	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	20	62187465	62187465	G	A	SNP	C20orf195	NM_024059.2	human	genbank	58_37c	+1	predicted	missense	c.449	p.R150Q	0.122	NULL	superfamily_FN_III-like	-	no_errors
C5orf49	0	genome.wustl.edu	37	5	7835571	7835571	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	5	7835571	7835571	C	T	SNP	C5orf49	NM_001089584.1	human	genbank	58_37c	-1	predicted	missense	c.188	p.R63H	0.000	NULL	NULL	-	no_errors
CCDC141	0	genome.wustl.edu	37	2	179742731	179742731	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	2	179742731	179742731	G	A	SNP	CCDC141	NM_173648.2	human	genbank	58_37c	-1	provisional	missense	c.134	p.T45I	0.567	NULL	NULL	-	no_errors
CDK13	0	genome.wustl.edu	37	7	40027851	40027851	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	7	40027851	40027851	C	T	SNP	CDK13	NM_003718.4	human	genbank	58_37c	+1	reviewed	missense	c.1865	p.A622V	0.998	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CLEC18B	0	genome.wustl.edu	37	16	74446108	74446108	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	16	74446108	74446108	C	T	SNP	CLEC18B	NM_001011880.2	human	genbank	58_37c	-1	validated	missense	c.821	p.R274Q	0.994	HMMSmart_SM00181	HMMSmart_SM00198,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_SCP,superfamily_PR-1-like,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
COMMD7	0	genome.wustl.edu	37	20	31315779	31315779	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	20	31315779	31315779	G	A	SNP	COMMD7	NM_053041.2	human	genbank	58_37c	-1	validated	silent	c.162	p.L54	0.975	HMMPfam_HCaRG	HMMPfam_HCaRG	-	no_errors
CRNKL1	0	genome.wustl.edu	37	20	20036596	20036596	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	20	20036596	20036596	T	A	SNP	CRNKL1	NM_016652.4	human	genbank	58_37c	-1	reviewed	missense	c.63	p.K21N	0.006	NULL	HMMPfam_HAT,HMMSmart_SM00386,superfamily_TPR-like	-	no_errors
DUSP16	0	genome.wustl.edu	37	12	12630318	12630318	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	12	12630318	12630318	G	A	SNP	DUSP16	NM_030640.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1447	p.R483*	0.000	NULL	HMMPfam_DSPc,HMMPfam_Rhodanese,HMMSmart_RHOD,superfamily_Rhodanese-like,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	2550	2550	+	RNA	SNP	A	A	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	MT	2550	2550	A	G	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000249665	0	genome.wustl.edu	37	8	86786366	86786366	+	RNA	SNP	G	G	C	rs140286263	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	8	86786366	86786366	G	C	SNP	ENSG00000249665	ENST00000503540	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.056	-	-	-	no_errors
FAM157B	0	genome.wustl.edu	37	9	141107536	141107537	+	In_Frame_Ins	INS	-	-	GCA	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	9	141107536	141107537	-	GCA	INS	FAM157B	NM_001145249.1	human	genbank	58_37c	+1	inferred	in_frame_ins	c.218_219	p.77in_frame_insQ	0.033:0.036	NULL	NULL	-	no_errors
FOXA1	0	genome.wustl.edu	37	14	38060755	38060762	+	Frame_Shift_Del	DEL	GCTGCTCC	GCTGCTCC	-	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	GCTGCTCC	GCTGCTCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	14	38060755	38060762	GCTGCTCC	-	DEL	FOXA1	NM_004496.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1234_1227	p.E410fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_HNF_C	HMMPfam_Fork_head,HMMSmart_FH,HMMPfam_Fork_head_N,PatternScan_FORK_HEAD_1,PatternScan_FORK_HEAD_2,HMMPfam_HNF_C,superfamily_SSF46785	-	no_errors
HMMR	0	genome.wustl.edu	37	5	162891728	162891728	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	5	162891728	162891728	G	A	SNP	HMMR	NM_001142556.1	human	genbank	58_37c	+1	reviewed	splice_site	c.146-1	e3-1	0.992	-	-	-	no_errors
IGDCC4	0	genome.wustl.edu	37	15	65684513	65684513	+	Missense_Mutation	SNP	C	C	T	rs148990036	byFrequency	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	15	65684513	65684513	C	T	SNP	IGDCC4	NM_020962.1	human	genbank	58_37c	-1	provisional	missense	c.2081	p.R694Q	0.837	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LOC100131868	0	genome.wustl.edu	37	3	197361567	197361567	+	RNA	SNP	G	G	T	rs77784365	byFrequency	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	3	197361567	197361567	G	T	SNP	LOC100131868	XR_038143.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.991	-	-	-	pseudogene
LOC100288406	0	genome.wustl.edu	37	12	92299	92299	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	12	92299	92299	C	G	SNP	LOC100288406	XM_002343141.1	human	genbank	58_37c	+1	model	missense	c.323	p.P108R	1.000	NULL	NULL	-	pseudogene
LOC200726	0	genome.wustl.edu	37	2	207508978	207508978	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	2	207508978	207508978	C	G	SNP	LOC200726	NM_001102659.1	human	genbank	58_37c	+1	predicted	missense	c.18	p.N6K	1.000	NULL	NULL	-	no_errors
LOXHD1	0	genome.wustl.edu	37	18	44057735	44057735	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	18	44057735	44057735	G	A	SNP	LOXHD1	NM_001145472.2	human	genbank	58_37c	-1	reviewed	silent	c.3189	p.V1063	1.000	HMMPfam_PLAT,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)	HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)	-	no_errors
MEF2A	0	genome.wustl.edu	37	15	100252710	100252712	+	In_Frame_Del	DEL	CAG	CAG	-	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	CAG	CAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	15	100252710	100252712	CAG	-	DEL	MEF2A	NM_005587.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1234_1236	p.Q415in_frame_del	1.000:1.000:1.000	NULL	HMMPfam_SRF-TF,HMMSmart_MADS,PatternScan_MADS_BOX_1,superfamily_TF_MADSbox	-	no_errors
MRPS30	0	genome.wustl.edu	37	5	44813385	44813385	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	5	44813385	44813385	G	A	SNP	MRPS30	NM_016640.3	human	genbank	58_37c	+1	reviewed	splice_site	c.1030+1	e4+1	1.000	-	-	-	no_errors
MUC16	0	genome.wustl.edu	37	19	9066614	9066614	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	19	9066614	9066614	C	A	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	missense	c.20832	p.E6944D	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16892135	16892135	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	1	16892135	16892135	G	A	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	silent	c.3009	p.D1003	0.001	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors
NCOA3	0	genome.wustl.edu	37	20	46279837	46279839	+	In_Frame_Del	DEL	CAG	CAG	-	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	CAG	CAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	20	46279837	46279839	CAG	-	DEL	NCOA3	NM_181659.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3763_3765	p.Q1258in_frame_del	0.584:0.607:0.598	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_DUF1518,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
ODF1	0	genome.wustl.edu	37	8	103573011	103573037	+	In_Frame_Del	DEL	TGCAACCCCTGCAGCCCCTGCAACCCG	TGCAACCCCTGCAGCCCCTGCAACCCG	-	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	TGCAACCCCTGCAGCCCCTGCAACCCG	TGCAACCCCTGCAGCCCCTGCAACCCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	8	103573011	103573037	TGCAACCCCTGCAGCCCCTGCAACCCG	-	DEL	ODF1	NM_024410.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.652_678	p.NPCSPCNPC219in_frame_del	0.995:0.998:0.993:0.606:0.498:0.829:0.957:0.993:0.985:0.985:0.958:0.001:0.001:0.001:0.728:0.987:0.994:0.989:0.990:0.972:0.003:0.001:0.000:0.002:0.891:0.887:0.486	NULL	superfamily_HSP20_chap	-	no_errors
OR4D6	0	genome.wustl.edu	37	11	59225033	59225033	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	11	59225033	59225033	C	A	SNP	OR4D6	NM_001004708.1	human	genbank	58_37c	+1	provisional	silent	c.600	p.I200	0.998	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDH10	0	genome.wustl.edu	37	4	134073305	134073305	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	4	134073305	134073305	C	T	SNP	PCDH10	NM_032961.1	human	genbank	58_37c	+1	reviewed	silent	c.2010	p.S670	0.998	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,PatternScan_EGF_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDE1C	0	genome.wustl.edu	37	7	31912927	31912927	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	7	31912927	31912927	T	G	SNP	PDE1C	NM_005020.1	human	genbank	58_37c	-1	provisional	missense	c.587	p.Y196S	1.000	superfamily_SSF109604	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_HDc,HMMPfam_PDEase_I_N,superfamily_SSF109604	-	no_errors
PEX7	0	genome.wustl.edu	37	6	137147511	137147511	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	6	137147511	137147511	T	G	SNP	PEX7	NM_000288.3	human	genbank	58_37c	+1	reviewed	missense	c.243	p.H81Q	0.995	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
PHLDB2	0	genome.wustl.edu	37	3	111693313	111693313	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	3	111693313	111693313	G	T	SNP	PHLDB2	NM_001134438.1	human	genbank	58_37c	+1	validated	missense	c.3665	p.R1222I	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
POMT2	0	genome.wustl.edu	37	14	77767530	77767530	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	14	77767530	77767530	A	G	SNP	POMT2	NM_013382.5	human	genbank	58_37c	-1	reviewed	missense	c.719	p.L240S	0.787	HMMPfam_PMT	PatternScan_SERPIN,HMMPfam_PMT,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472	-	no_errors
RBM23	0	genome.wustl.edu	37	14	23371255	23371256	+	In_Frame_Ins	INS	-	-	GGC	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	14	23371255	23371256	-	GGC	INS	RBM23	NM_001077351.1	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.1180_1179	p.393in_frame_insA	0.736:0.712	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RHOH	0	genome.wustl.edu	37	4	40245027	40245027	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	4	40245027	40245027	C	T	SNP	RHOH	NM_004310.3	human	genbank	58_37c	+1	validated	silent	c.21	p.C7	0.926	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SCN3A	0	genome.wustl.edu	37	2	166012326	166012326	+	Missense_Mutation	SNP	G	G	C	rs147330828	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	2	166012326	166012326	G	C	SNP	SCN3A	NM_006922.3	human	genbank	58_37c	-1	reviewed	missense	c.1119	p.F373L	0.987	HMMPfam_Ion_trans,superfamily_SSF81324	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_SSF81324	-	no_errors
SI	0	genome.wustl.edu	37	3	164755728	164755728	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	3	164755728	164755728	T	C	SNP	SI	NM_001041.3	human	genbank	58_37c	-1	reviewed	missense	c.2386	p.I796V	1.000	HMMPfam_Glyco_hydro_31	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2,HMMPfam_Trefoil,HMMSmart_SM00018,superfamily_Trefoil,superfamily_(Trans)glycosidases,PatternScan_P_TREFOIL	-	no_errors
SP4	0	genome.wustl.edu	37	7	21516732	21516732	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	7	21516732	21516732	C	A	SNP	SP4	NM_003112.3	human	genbank	58_37c	+1	validated	missense	c.1714	p.Q572K	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
TAF1	0	genome.wustl.edu	37	X	70627446	70627446	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	X	70627446	70627446	G	A	SNP	TAF1	NM_004606.3	human	genbank	58_37c	+1	reviewed	missense	c.4190	p.R1397Q	1.000	superfamily_Bromodomain	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
TLK2	0	genome.wustl.edu	37	17	60678053	60678053	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	17	60678053	60678053	A	G	SNP	TLK2	NM_006852.3	human	genbank	58_37c	+1	validated	missense	c.1592	p.D531G	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TOR3A	0	genome.wustl.edu	37	1	179063271	179063271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	1	179063271	179063271	C	T	SNP	TOR3A	NM_022371.3	human	genbank	58_37c	+1	validated	missense	c.862	p.L288F	1.000	HMMPfam_Torsin,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Torsin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TSHZ3	0	genome.wustl.edu	37	19	31768399	31768399	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XC-01A-11D-A14G-09	TCGA-D8-A1XC-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	68fd3045-073d-4242-8a41-41b707fca625	fea77f35-8b5b-404e-a9e1-5b2d3d02fd4c	19	31768399	31768399	G	A	SNP	TSHZ3	NM_020856.2	human	genbank	58_37c	-1	validated	missense	c.2300	p.P767L	0.978	NULL	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors
