Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADCY9	0	genome.wustl.edu	37	16	4057514	4057514	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	16	4057514	4057514	C	G	SNP	ADCY9	NM_001116.2	human	genbank	58_37c	-1	reviewed	missense	c.1739	p.R580P	0.063	NULL	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
AGRN	0	genome.wustl.edu	37	1	984735	984735	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	984735	984735	A	T	SNP	AGRN	NM_198576.2	human	genbank	58_37c	+1	validated	missense	c.4418	p.E1473V	1.000	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1	HMMPfam_SEA,HMMSmart_SEA,HMMSmart_LamG,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Kazal_1,HMMSmart_KAZAL,HMMSmart_FOLN,HMMPfam_NtA,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl,superfamily_TIMP_like,HMMPfam_Laminin_G_1,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF100895,superfamily_SSF57196,superfamily_SSF82671	-	no_errors
ALKBH3	0	genome.wustl.edu	37	11	43940636	43940636	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	43940636	43940636	G	A	SNP	ALKBH3	NM_139178.3	human	genbank	58_37c	+1	validated	missense	c.718	p.D240N	1.000	NULL	NULL	-	no_errors
ANPEP	0	genome.wustl.edu	37	15	90342682	90342682	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	15	90342682	90342682	T	G	SNP	ANPEP	NM_001150.2	human	genbank	58_37c	-1	reviewed	missense	c.1928	p.Q643P	0.988	NULL	PatternScan_ZINC_PROTEASE,HMMPfam_Peptidase_M1,superfamily_SSF55486,superfamily_SSF63737	-	no_errors
ATP9A	0	genome.wustl.edu	37	20	50238710	50238710	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	20	50238710	50238710	A	T	SNP	ATP9A	NM_006045.1	human	genbank	58_37c	-1	validated	missense	c.2018	p.V673D	0.998	HMMPfam_Hydrolase,superfamily_HAD-like	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
C12orf70	0	genome.wustl.edu	37	12	27654981	27654981	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	12	27654981	27654981	G	A	SNP	C12orf70	NM_001145010.1	human	genbank	58_37c	+1	validated	missense	c.959	p.R320H	0.000	NULL	NULL	-	no_errors
C15orf53	0	genome.wustl.edu	37	15	38990578	38990578	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	15	38990578	38990578	C	G	SNP	C15orf53	NM_207444.2	human	genbank	58_37c	+1	validated	silent	c.372	p.P124	0.000	NULL	NULL	-	no_errors
C20orf3	0	genome.wustl.edu	37	20	24954310	24954310	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	20	24954310	24954310	G	C	SNP	C20orf3	NM_020531.2	human	genbank	58_37c	-1	validated	missense	c.392	p.T131S	0.942	superfamily_Calcium-dependent phosphotriesterase	HMMPfam_Str_synth,superfamily_Calcium-dependent phosphotriesterase	-	no_errors
CCDC74A	0	genome.wustl.edu	37	2	132288293	132288293	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	2	132288293	132288293	G	C	SNP	CCDC74A	NM_138770.1	human	genbank	58_37c	+1	provisional	missense	c.437	p.G146A	0.006	NULL	NULL	-	no_errors
CEP350	0	genome.wustl.edu	37	1	180062936	180062936	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	180062936	180062936	A	G	SNP	CEP350	NM_014810.4	human	genbank	58_37c	+1	reviewed	missense	c.7696	p.I2566V	1.000	superfamily_SSF74924	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_SSF74924	-	no_errors
CNKSR1	0	genome.wustl.edu	37	1	26508367	26508367	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	26508367	26508367	A	C	SNP	CNKSR1	NM_006314.2	human	genbank	58_37c	+1	reviewed	missense	c.412	p.N138H	1.000	HMMPfam_CRIC_ras_sig	superfamily_PDZ domain-like,HMMSmart_SM00454,HMMPfam_PH,HMMSmart_SM00233,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,HMMPfam_CRIC_ras_sig,superfamily_PH domain-like	-	no_errors
DNHD1	0	genome.wustl.edu	37	11	6567895	6567896	+	In_Frame_Ins	INS	-	-	TGCCCTACTGCA	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	6567895	6567896	-	TGCCCTACTGCA	INS	DNHD1	NM_144666.2	human	genbank	58_37c	+1	provisional	in_frame_ins	c.5726_5727	p.1913in_frame_insHALL	0.551:0.033	NULL	HMMPfam_Dynein_heavy,superfamily_Ferritin-like,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOCK8	0	genome.wustl.edu	37	9	390476	390476	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	9	390476	390476	C	T	SNP	DOCK8	NM_203447.3	human	genbank	58_37c	+1	reviewed	silent	c.2676	p.F892	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
ENSG00000198804	0	genome.wustl.edu	37	MT	7131	7131	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	MT	7131	7131	G	A	SNP	ENSG00000198804	ENST00000361624	human	ensembl	58_37c	+1	known	missense	c.1228	p.A410T	NULL	HMMPfam_COX1,superfamily_Cytochrome c oxidase subunit I-like	HMMPfam_COX1,PatternScan_COX1_CUB,superfamily_Cytochrome c oxidase subunit I-like	-	mismatch_between_exon_seq_and_reference
ENSG00000225634	0	genome.wustl.edu	37	4	88537123	88537123	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	4	88537123	88537123	C	T	SNP	ENSG00000225634	ENST00000454415	human	ensembl	58_37c	-1	known	missense	c.466	p.A156T	0.989	NULL	NULL	-	no_start_codon:no_stop_codon
ENSG00000244937	0	genome.wustl.edu	37	15	83360991	83360991	+	RNA	SNP	G	G	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	15	83360991	83360991	G	T	SNP	ENSG00000244937	ENST00000499050	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors
FAM166A	0	genome.wustl.edu	37	9	140138642	140138642	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	9	140138642	140138642	G	C	SNP	FAM166A	NM_001001710.1	human	genbank	58_37c	-1	predicted	missense	c.846	p.F282L	1.000	NULL	HMMPfam_DUF2475	-	no_errors
FAM171B	0	genome.wustl.edu	37	2	187626600	187626600	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	2	187626600	187626600	G	T	SNP	FAM171B	NM_177454.3	human	genbank	58_37c	+1	validated	nonsense	c.1531	p.E511*	1.000	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FAM38A	0	genome.wustl.edu	37	16	88800396	88800398	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	16	88800396	88800398	CTG	-	DEL	FAM38A	ENST00000451779	human	ensembl	58_37c	-1	known	in_frame_del	c.858_856	p.Q286in_frame_del	0.035:0.030:0.018	NULL	PatternScan_IG_MHC	-	no_errors
FAM83A	0	genome.wustl.edu	37	8	124221764	124221764	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	8	124221764	124221764	G	A	SNP	FAM83A	ENST00000360681	human	ensembl	58_37c	+1	known	splice_site	c.875-1	e4-1	0.000	-	-	-	no_errors
FLJ43950	0	genome.wustl.edu	37	9	84531130	84531130	+	RNA	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	9	84531130	84531130	C	G	SNP	FLJ43950	NR_026851.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.000	-	-	-	pseudogene
FMO1	0	genome.wustl.edu	37	1	171250104	171250104	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	171250104	171250104	C	T	SNP	FMO1	NM_002021.1	human	genbank	58_37c	+1	reviewed	silent	c.807	p.Y269	0.996	HMMPfam_FMO-like,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_FMO-like,PatternScan_LIPOCALIN,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_FAD/NAD(P)-binding domain	-	no_errors
FREM3	0	genome.wustl.edu	37	4	144545312	144545312	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	4	144545312	144545312	C	T	SNP	FREM3	ENST00000329798	human	ensembl	58_37c	-1	known	missense	c.5602	p.V1868I	1.000	NULL	HMMPfam_Calx-beta,HMMSmart_SM00237	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29623210	29623210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	20	29623210	29623210	C	T	SNP	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	missense	c.22	p.H8Y	1.000	HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
FTSJD1	0	genome.wustl.edu	37	16	71318994	71318994	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	16	71318994	71318994	A	C	SNP	FTSJD1	NM_001099642.1	human	genbank	58_37c	-1	validated	missense	c.830	p.F277C	1.000	HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
GCC2	0	genome.wustl.edu	37	2	109086705	109086705	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	2	109086705	109086705	C	A	SNP	GCC2	NM_181453.3	human	genbank	58_37c	+1	reviewed	nonsense	c.920	p.S307*	0.671	NULL	HMMPfam_GRIP,HMMSmart_Grip	-	no_errors
GSTP1	0	genome.wustl.edu	37	11	67352214	67352214	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	67352214	67352214	C	G	SNP	GSTP1	ENST00000398606	human	ensembl	58_37c	+1	known	missense	c.203	p.T68S	1.000	HMMPfam_GST_N,superfamily_Thiordxn-like_fd	HMMPfam_GST_N,HMMPfam_GST_C,superfamily_GST_C_like,superfamily_Thiordxn-like_fd	-	no_errors
GYG2	0	genome.wustl.edu	37	X	2761348	2761348	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	X	2761348	2761348	G	A	SNP	GYG2	NM_003918.2	human	genbank	58_37c	+1	reviewed	silent	c.195	p.T65	0.908	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
HLA-F	0	genome.wustl.edu	37	6	29692856	29692856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	6	29692856	29692856	C	T	SNP	HLA-F	NM_001098479.1	human	genbank	58_37c	+1	reviewed	missense	c.659	p.A220V	0.857	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726	HMMPfam_MHC_I,PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_IGc1,superfamily_MHC_I/II-like_Ag-recog,superfamily_SSF48726	-	no_errors
IMPG1	0	genome.wustl.edu	37	6	76728458	76728458	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	6	76728458	76728458	G	T	SNP	IMPG1	NM_001563.2	human	genbank	58_37c	-1	provisional	missense	c.784	p.L262I	0.872	HMMPfam_SEA,HMMSmart_SEA,superfamily_SSF82671	HMMPfam_SEA,HMMSmart_SEA,superfamily_SSF82671	-	no_errors
KIF2A	0	genome.wustl.edu	37	5	61642964	61642964	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	5	61642964	61642964	A	G	SNP	KIF2A	NM_001098511.1	human	genbank	58_37c	+1	validated	missense	c.72	p.I24M	1.000	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
KIF5C	0	genome.wustl.edu	37	2	149868144	149868144	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	2	149868144	149868144	G	T	SNP	KIF5C	ENST00000435030	human	ensembl	58_37c	+1	known	missense	c.2828	p.R943L	1.000	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIF6	0	genome.wustl.edu	37	6	39507890	39507890	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	6	39507890	39507890	G	A	SNP	KIF6	NM_145027.4	human	genbank	58_37c	-1	validated	missense	c.1534	p.R512C	0.000	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIFC1	0	genome.wustl.edu	37	6	33371565	33371565	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	6	33371565	33371565	T	C	SNP	KIFC1	NM_002263.3	human	genbank	58_37c	+1	validated	silent	c.415	p.L139	0.830	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LILRA1	0	genome.wustl.edu	37	19	55106797	55106797	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	19	55106797	55106797	C	A	SNP	LILRA1	NM_006863.1	human	genbank	58_37c	+1	provisional	nonsense	c.591	p.C197*	0.137	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LOC100287927	0	genome.wustl.edu	37	22	23248691	23248691	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	22	23248691	23248691	C	T	SNP	LOC100287927	XM_002343770.1	human	genbank	58_37c	-1	model	silent	c.93	p.L31	0.993	NULL	PatternScan_TUBULIN_B_AUTOREG	-	no_errors
LOC100288406	0	genome.wustl.edu	37	12	92018	92018	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	12	92018	92018	T	C	SNP	LOC100288406	XM_002343141.1	human	genbank	58_37c	+1	model	silent	c.42	p.T14	0.001	NULL	NULL	-	pseudogene
LOC100291393	0	genome.wustl.edu	37	19	372814	372814	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	19	372814	372814	G	C	SNP	LOC100291393	XM_002347883.1	human	genbank	58_37c	+1	model	missense	c.122	p.W41S	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
LOC643733	0	genome.wustl.edu	37	11	104776204	104776204	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	104776204	104776204	G	A	SNP	LOC643733	XR_078449.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.405	-	-	-	no_errors
LOC653781	0	genome.wustl.edu	37	2	131414573	131414573	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	2	131414573	131414573	A	C	SNP	LOC653781	XM_929706.3	human	genbank	58_37c	+1	model	missense	c.2240	p.K747T	1.000	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Actin,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE,PatternScan_ACTINS_2,superfamily_Actin-like ATPase domain	-	no_errors
LRRC8C	0	genome.wustl.edu	37	1	90180366	90180366	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	90180366	90180366	C	A	SNP	LRRC8C	NM_032270.4	human	genbank	58_37c	+1	validated	missense	c.2237	p.P746Q	1.000	superfamily_L domain-like	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195506982	195506982	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	3	195506982	195506982	G	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	silent	c.11085	p.T3695	0.276	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MYO16	0	genome.wustl.edu	37	13	109496701	109496701	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	13	109496701	109496701	G	C	SNP	MYO16	NM_015011.1	human	genbank	58_37c	+1	validated	missense	c.1042	p.V348L	1.000	NULL	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NCAPD3	0	genome.wustl.edu	37	11	134090556	134090556	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	134090556	134090556	T	A	SNP	NCAPD3	NM_015261.2	human	genbank	58_37c	-1	validated	missense	c.129	p.E43D	1.000	NULL	HMMPfam_HEAT,superfamily_ARM-type_fold	-	no_errors
NF1	0	genome.wustl.edu	37	17	29670148	29670154	+	Splice_Site	DEL	TAAAAGG	TAAAAGG	-	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	TAAAAGG	TAAAAGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	17	29670148	29670154	TAAAAGG	-	DEL	NF1	NM_001042492.2	human	genbank	58_37c	+1	reviewed	splice_site_del	c.7189+7_7189+1	e49-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	no_errors
OASL	0	genome.wustl.edu	37	12	121476669	121476669	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	12	121476669	121476669	C	T	SNP	OASL	NM_003733.2	human	genbank	58_37c	-1	validated	missense	c.106	p.A36T	0.000	superfamily_Nucleotidyltransferase	HMMPfam_ubiquitin,HMMSmart_SM00213,PatternScan_25A_SYNTH_1,PatternScan_25A_SYNTH_2,HMMPfam_OAS1_C,superfamily_Ubiquitin-like,superfamily_Nucleotidyltransferase,superfamily_PAP/OAS1 substrate-binding domain	-	no_errors
OR10K1	0	genome.wustl.edu	37	1	158435435	158435435	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	158435435	158435435	T	G	SNP	OR10K1	NM_001004473.1	human	genbank	58_37c	+1	provisional	missense	c.84	p.F28L	0.008	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OTOP2	0	genome.wustl.edu	37	17	72920980	72920980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	17	72920980	72920980	G	A	SNP	OTOP2	NM_178160.2	human	genbank	58_37c	+1	validated	missense	c.253	p.V85M	0.657	NULL	HMMPfam_DUF270	-	no_errors
PANX3	0	genome.wustl.edu	37	11	124489712	124489712	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	124489712	124489712	G	C	SNP	PANX3	NM_052959.2	human	genbank	58_37c	+1	reviewed	missense	c.1060	p.D354H	1.000	NULL	NULL	-	no_errors
PMPCA	0	genome.wustl.edu	37	9	139313014	139313014	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	9	139313014	139313014	A	C	SNP	PMPCA	NM_015160.1	human	genbank	58_37c	+1	provisional	missense	c.998	p.D333A	0.999	HMMPfam_Peptidase_M16_C,superfamily_LuxS/MPP-like metallohydrolase	PatternScan_INSULINASE,HMMPfam_Peptidase_M16_C,superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16	-	no_errors
SLC38A10	0	genome.wustl.edu	37	17	79219501	79219503	+	In_Frame_Del	DEL	ATG	ATG	-	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	ATG	ATG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	17	79219501	79219503	ATG	-	DEL	SLC38A10	NM_001037984.1	human	genbank	58_37c	-1	validated	in_frame_del	c.3215_3213	p.I1072in_frame_del	0.113:0.154:0.221	NULL	HMMPfam_Aa_trans	-	no_errors
SMC1B	0	genome.wustl.edu	37	22	45802482	45802482	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	22	45802482	45802482	G	A	SNP	SMC1B	NM_148674.3	human	genbank	58_37c	-1	validated	silent	c.474	p.I158	1.000	HMMPfam_SMC_N,superfamily_SSF52540	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_SMC_hinge,superfamily_SSF52540	-	no_errors
SPTAN1	0	genome.wustl.edu	37	9	131367318	131367318	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	9	131367318	131367318	C	G	SNP	SPTAN1	NM_001130438.1	human	genbank	58_37c	+1	validated	missense	c.3725	p.A1242G	1.000	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_Spectrin,HMMSmart_EFh,HMMPfam_efhand_Ca_insen,HMMSmart_SPEC,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin,superfamily_SSF47473	-	no_errors
STARD10	0	genome.wustl.edu	37	11	72468901	72468901	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	11	72468901	72468901	C	T	SNP	STARD10	NM_006645.2	human	genbank	58_37c	-1	validated	missense	c.488	p.R163Q	1.000	HMMPfam_START,HMMSmart_START,superfamily_SSF55961	HMMPfam_START,HMMSmart_START,superfamily_SSF55961	-	no_errors
STK10	0	genome.wustl.edu	37	5	171533635	171533635	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	5	171533635	171533635	C	T	SNP	STK10	NM_005990.3	human	genbank	58_37c	-1	reviewed	silent	c.777	p.T259	0.364	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TCF20	0	genome.wustl.edu	37	22	42564676	42564676	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	22	42564676	42564676	G	T	SNP	TCF20	NM_005650.1	human	genbank	58_37c	-1	reviewed	missense	c.5866	p.Q1956K	1.000	NULL	HMMSmart_SM00249	-	no_errors
TET2	0	genome.wustl.edu	37	4	106155404	106155406	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	4	106155404	106155406	CTC	-	DEL	TET2	NM_001127208.1	human	genbank	58_37c	+1	validated	in_frame_del	c.305_307	p.SL102in_frame_delF	1.000:1.000:1.000	NULL	NULL	-	no_errors
TJP1	0	genome.wustl.edu	37	15	30011076	30011076	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	15	30011076	30011076	C	G	SNP	TJP1	NM_003257.3	human	genbank	58_37c	-1	validated	missense	c.3270	p.Q1090H	0.990	NULL	HMMPfam_ZU5,HMMSmart_SM00218,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,HMMPfam_SH3_2,HMMPfam_Gua_kin_assoc_C,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TMEM155	0	genome.wustl.edu	37	4	122682813	122682813	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	4	122682813	122682813	G	A	SNP	TMEM155	NM_152399.2	human	genbank	58_37c	-1	validated	missense	c.92	p.A31V	0.062	NULL	NULL	-	no_errors
TMPRSS11D	0	genome.wustl.edu	37	4	68725377	68725377	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	4	68725377	68725377	T	C	SNP	TMPRSS11D	NM_004262.2	human	genbank	58_37c	-1	reviewed	missense	c.28	p.T10A	0.000	NULL	HMMPfam_SEA,HMMSmart_SEA,HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_SSF82671	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578263	7578263	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	17	7578263	7578263	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.586	p.R196*	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TTN	0	genome.wustl.edu	37	2	179477304	179477304	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	2	179477304	179477304	C	G	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	splice_site	c.42245-1	e214-1	1.000	-	-	-	no_errors
VPS13D	0	genome.wustl.edu	37	1	12374322	12374322	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	1	12374322	12374322	C	A	SNP	VPS13D	ENST00000011700	human	ensembl	58_37c	+1	known	missense	c.3554	p.S1185Y	1.000	NULL	HMMPfam_UBA,superfamily_UBA-like,HMMPfam_DUF1162,HMMSmart_SM00165	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
VSTM2A	0	genome.wustl.edu	37	7	54610496	54610497	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	7	54610496	54610497	TC	-	DEL	VSTM2A	NM_182546.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.73_74	p.Q26fs	1.000:1.000	HMMPfam_V-set	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	-	no_errors
WASH6P	0	genome.wustl.edu	37	X	155254706	155254706	+	Missense_Mutation	SNP	C	C	T	rs4612551	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	X	155254706	155254706	C	T	SNP	WASH6P	ENST00000359512	human	ensembl	58_37c	+1	known	missense	c.1244	p.T415M	1.000	NULL	NULL	-	no_errors
XKR5	0	genome.wustl.edu	37	8	6669166	6669182	+	Frame_Shift_Del	DEL	CTGCTGTCCTTCCCCTC	CTGCTGTCCTTCCCCTC	-	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	CTGCTGTCCTTCCCCTC	CTGCTGTCCTTCCCCTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	8	6669166	6669182	CTGCTGTCCTTCCCCTC	-	DEL	XKR5	ENST00000409172	human	ensembl	58_37c	-1	known	frame_shift_del	c.1611_1595	p.G532fs	0.001:0.001:0.001:0.001:0.001:0.001:0.000:0.006:0.006:0.000:0.000:0.001:0.004:0.000:0.001:0.001:0.000	NULL	HMMPfam_XK-related	-	no_errors
XRN1	0	genome.wustl.edu	37	3	142102248	142102248	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	3	142102248	142102248	C	T	SNP	XRN1	NM_019001.3	human	genbank	58_37c	-1	validated	missense	c.2510	p.R837Q	1.000	NULL	HMMPfam_XRN_N,superfamily_dsRNA-binding domain-like	-	no_errors
ZNF263	0	genome.wustl.edu	37	16	3336103	3336103	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	16	3336103	3336103	C	T	SNP	ZNF263	NM_005741.4	human	genbank	58_37c	+1	validated	silent	c.723	p.L241	0.828	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF75D	0	genome.wustl.edu	37	X	134426226	134426226	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	X	134426226	134426226	G	T	SNP	ZNF75D	NM_007131.3	human	genbank	58_37c	-1	reviewed	silent	c.585	p.T195	0.029	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF81	0	genome.wustl.edu	37	X	47774912	47774912	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A27M-01A-11D-A16D-09	TCGA-D8-A27M-10A-01D-A16D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cb9257f9-ca3f-4c14-a680-6632175dd526	d57d98db-8901-497c-b97e-1fc813a6d1ab	X	47774912	47774912	C	A	SNP	ZNF81	NM_007137.3	human	genbank	58_37c	+1	reviewed	missense	c.867	p.F289L	0.004	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
