Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCD1	0	genome.wustl.edu	37	X	153005554	153005554	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	X	153005554	153005554	A	G	SNP	ABCD1	ENST00000443684	human	ensembl	58_37c	+1	known	missense	c.500	p.K167R	0.886	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_tran,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ANKRD30A	0	genome.wustl.edu	37	10	37490161	37490161	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	10	37490161	37490161	A	G	SNP	ANKRD30A	NM_052997.2	human	genbank	58_37c	+1	validated	splice_site	c.2611-2	e31-2	0.459	-	-	-	no_errors
ANXA2P3	0	genome.wustl.edu	37	10	66585464	66585464	+	RNA	SNP	A	A	T	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	10	66585464	66585464	A	T	SNP	ANXA2P3	NR_001446.2	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.995	-	-	-	pseudogene
AP3M1	0	genome.wustl.edu	37	10	75885944	75885944	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	10	75885944	75885944	G	C	SNP	AP3M1	NM_012095.4	human	genbank	58_37c	-1	reviewed	missense	c.973	p.P325A	1.000	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	HMMPfam_Clat_adaptor_s,HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor,superfamily_SNARE-like,PatternScan_CLAT_ADAPTOR_M_1,PatternScan_CLAT_ADAPTOR_M_2	-	no_errors
ARID3B	0	genome.wustl.edu	37	15	74836605	74836605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	15	74836605	74836605	G	A	SNP	ARID3B	NM_006465.2	human	genbank	58_37c	+1	reviewed	missense	c.328	p.V110M	0.986	NULL	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like	-	no_errors
ARSK	0	genome.wustl.edu	37	5	94927224	94927224	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	5	94927224	94927224	G	A	SNP	ARSK	NM_198150.2	human	genbank	58_37c	+1	validated	missense	c.991	p.E331K	1.000	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core	HMMPfam_Sulfatase,PatternScan_SULFATASE_2,PatternScan_SULFATASE_1,superfamily_Alkaline_phosphatase_core	-	no_errors
ATRIP	0	genome.wustl.edu	37	3	48501938	48501938	+	Silent	SNP	A	A	G	rs149275811	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	3	48501938	48501938	A	G	SNP	ATRIP	NM_130384.1	human	genbank	58_37c	+1	reviewed	silent	c.1485	p.L495	0.000	NULL	NULL	-	no_errors
BAZ2A	0	genome.wustl.edu	37	12	56997461	56997461	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	12	56997461	56997461	C	T	SNP	BAZ2A	NM_013449.3	human	genbank	58_37c	-1	validated	missense	c.3068	p.R1023Q	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_MBD,HMMSmart_SM00391,HMMSmart_SM00249,HMMPfam_DDT,superfamily_FYVE/PHD zinc finger,superfamily_DNA-binding domain,HMMPfam_AT_hook,HMMSmart_SM00384,PatternScan_BROMODOMAIN_1,HMMSmart_SM00571,HMMPfam_PHD	-	no_errors
COASY	0	genome.wustl.edu	37	17	40715065	40715067	+	In_Frame_Del	DEL	GCT	GCT	-	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	GCT	GCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	17	40715065	40715067	GCT	-	DEL	COASY	NM_001042532.2	human	genbank	58_37c	+1	validated	in_frame_del	c.512_514	p.C173in_frame_del	1.000:0.998:1.000	NULL	HMMPfam_CTP_transf_2,HMMPfam_CoaE,superfamily_SSF52374,superfamily_SSF52540	-	no_errors
CRIPAK	0	genome.wustl.edu	37	4	1388375	1388376	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	4	1388375	1388376	-	CA	INS	CRIPAK	NM_175918.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.76_77	p.C27fs	0.039:0.487	NULL	HMMSmart_PostSET	-	no_errors
DCAF6	0	genome.wustl.edu	37	1	168032951	168032951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	1	168032951	168032951	C	T	SNP	DCAF6	NM_018442.2	human	genbank	58_37c	+1	validated	missense	c.2180	p.P727L	1.000	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_IQ,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	-	no_errors
ENSG00000232657	0	genome.wustl.edu	37	4	49110441	49110441	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	4	49110441	49110441	T	C	SNP	ENSG00000232657	ENST00000417204	human	ensembl	58_37c	-1	known	missense	c.61	p.M21V	0.000	NULL	NULL	-	no_stop_codon
ENSG00000249566	0	genome.wustl.edu	37	X	23093782	23093782	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	X	23093782	23093782	G	A	SNP	ENSG00000249566	ENST00000508288	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.004	-	-	-	no_errors
ENSG00000249665	0	genome.wustl.edu	37	8	86786357	86786357	+	RNA	SNP	C	C	A	rs60098459	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	8	86786357	86786357	C	A	SNP	ENSG00000249665	ENST00000503540	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.034	-	-	-	no_errors
FAM138B	0	genome.wustl.edu	37	2	114336277	114336277	+	RNA	SNP	C	C	A	rs148851148	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	2	114336277	114336277	C	A	SNP	FAM138B	NR_026821.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.004	-	-	-	no_errors
GCN1L1	0	genome.wustl.edu	37	12	120593147	120593147	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	12	120593147	120593147	C	A	SNP	GCN1L1	NM_006836.1	human	genbank	58_37c	-1	validated	missense	c.3528	p.R1176S	0.998	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
GK5	0	genome.wustl.edu	37	3	141934463	141934463	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	3	141934463	141934463	G	A	SNP	GK5	NM_001039547.2	human	genbank	58_37c	-1	validated	silent	c.219	p.A73	0.994	HMMPfam_FGGY_N,superfamily_Actin-like ATPase domain	PatternScan_FGGY_KINASES_2,HMMPfam_FGGY_N,HMMPfam_FGGY_C,superfamily_Actin-like ATPase domain	-	no_errors
IL27RA	0	genome.wustl.edu	37	19	14150592	14150592	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	19	14150592	14150592	C	G	SNP	IL27RA	NM_004843.2	human	genbank	58_37c	+1	reviewed	missense	c.404	p.P135R	0.005	HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
KCNK16	0	genome.wustl.edu	37	6	39283076	39283076	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	6	39283076	39283076	G	A	SNP	KCNK16	NM_001135105.1	human	genbank	58_37c	-1	reviewed	missense	c.793	p.P265S	0.000	NULL	HMMPfam_Ion_trans_2,superfamily_SSF81324	-	no_errors
LOC642661	0	genome.wustl.edu	37	14	19720361	19720361	+	RNA	SNP	C	C	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	14	19720361	19720361	C	A	SNP	LOC642661	XR_016132.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.996	-	-	-	pseudogene
LOC644768	0	genome.wustl.edu	37	22	16909896	16909897	+	RNA	DEL	AC	AC	-	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	22	16909896	16909897	AC	-	DEL	LOC644768	XR_016834.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.976:0.968	-	-	-	pseudogene
NEDD4L	0	genome.wustl.edu	37	18	56018246	56018246	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	18	56018246	56018246	C	T	SNP	NEDD4L	NM_001144967.1	human	genbank	58_37c	+1	validated	silent	c.1677	p.H559	0.889	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G	rs121913279	byCluster	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PKD1L1	0	genome.wustl.edu	37	7	47969011	47969011	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	7	47969011	47969011	G	A	SNP	PKD1L1	NM_138295.2	human	genbank	58_37c	-1	reviewed	nonsense	c.850	p.R284*	0.000	NULL	HMMPfam_PKD,HMMSmart_SM00089,superfamily_PKD domain,HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_REJ,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PKD_channel	-	no_errors
RP1L1	0	genome.wustl.edu	37	8	10469694	10469696	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	8	10469694	10469696	CTG	-	DEL	RP1L1	NM_178857.5	human	genbank	58_37c	-1	validated	in_frame_del	c.1914_1912	p.Q638in_frame_del	0.000:0.000:0.000	NULL	HMMPfam_DCX,HMMPfam_S-antigen,superfamily_SSF89837	-	no_errors
SELL	0	genome.wustl.edu	37	1	169677935	169677935	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	1	169677935	169677935	G	T	SNP	SELL	NM_000655.4	human	genbank	58_37c	-1	reviewed	missense	c.95	p.A32E	0.000	HMMSmart_CLECT	HMMPfam_Sushi,HMMSmart_CCP,HMMPfam_Lectin_C,HMMSmart_CLECT,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement_control_module,superfamily_C-type_lectin_fold,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF57196	-	no_errors
SERPINB8	0	genome.wustl.edu	37	18	61650836	61650836	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	18	61650836	61650836	G	A	SNP	SERPINB8	NM_002640.3	human	genbank	58_37c	+1	validated	missense	c.448	p.A150T	0.000	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SLC38A10	0	genome.wustl.edu	37	17	79219501	79219503	+	In_Frame_Del	DEL	ATG	ATG	-	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	ATG	ATG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	17	79219501	79219503	ATG	-	DEL	SLC38A10	NM_001037984.1	human	genbank	58_37c	-1	validated	in_frame_del	c.3215_3213	p.I1072in_frame_del	0.113:0.154:0.221	NULL	HMMPfam_Aa_trans	-	no_errors
SRGAP2	0	genome.wustl.edu	37	1	206574931	206574931	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	1	206574931	206574931	G	A	SNP	SRGAP2	NM_015326.2	human	genbank	58_37c	+1	validated	missense	c.727	p.A243T	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TMEM26	0	genome.wustl.edu	37	10	63191081	63191081	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	10	63191081	63191081	T	C	SNP	TMEM26	NM_178505.6	human	genbank	58_37c	-1	validated	missense	c.280	p.I94V	0.034	HMMPfam_Tmem26	HMMPfam_Tmem26	-	no_errors
TPPP2	0	genome.wustl.edu	37	14	21500170	21500170	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L6-01A-11D-A13L-09	TCGA-E2-A1L6-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f610239f-5610-4d7b-bc31-ae3ccb9c425d	3388c646-ffac-43bf-b8a6-c5f216b17af0	14	21500170	21500170	G	A	SNP	TPPP2	NM_173846.4	human	genbank	58_37c	+1	validated	missense	c.447	p.M149I	0.001	HMMPfam_p25-alpha	HMMPfam_p25-alpha	-	no_errors
