Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ATP8B2	0	genome.wustl.edu	37	1	154303923	154303923	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	1	154303923	154303923	C	T	SNP	ATP8B2	NM_020452.3	human	genbank	58_37c	+1	reviewed	missense	c.406	p.R136C	1.000	superfamily_SSF81665	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660,superfamily_SSF81665	-	no_errors
BRS3	0	genome.wustl.edu	37	X	135570652	135570652	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	X	135570652	135570652	C	T	SNP	BRS3	NM_001727.1	human	genbank	58_37c	+1	validated	missense	c.379	p.R127W	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
C10orf120	0	genome.wustl.edu	37	10	124459255	124459255	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	10	124459255	124459255	T	C	SNP	C10orf120	NM_001010912.1	human	genbank	58_37c	-1	predicted	missense	c.52	p.S18G	0.000	NULL	NULL	-	no_errors
CBFB	0	genome.wustl.edu	37	16	67100607	67100607	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	16	67100607	67100607	T	A	SNP	CBFB	NM_022845.2	human	genbank	58_37c	+1	reviewed	missense	c.305	p.I102N	1.000	HMMPfam_CBF_beta,superfamily_CBF_beta	HMMPfam_CBF_beta,superfamily_CBF_beta	-	no_errors
CDH1	0	genome.wustl.edu	37	16	68857367	68857367	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	16	68857367	68857367	A	T	SNP	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	nonsense	c.2002	p.K668*	1.000	HMMPfam_Cadherin,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
CLDN12	0	genome.wustl.edu	37	7	90042451	90042451	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	7	90042451	90042451	T	A	SNP	CLDN12	NM_012129.3	human	genbank	58_37c	+1	validated	missense	c.461	p.V154D	1.000	NULL	PatternScan_CLAUDIN	-	no_errors
CRISPLD1	0	genome.wustl.edu	37	8	75927084	75927084	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	8	75927084	75927084	C	T	SNP	CRISPLD1	NM_031461.4	human	genbank	58_37c	+1	validated	missense	c.664	p.R222W	0.873	NULL	HMMSmart_SM00198,HMMPfam_LCCL,HMMSmart_SM00603,superfamily_LCCL domain,HMMPfam_SCP,superfamily_PR-1-like,PatternScan_CRISP_2	-	no_errors
CROCCL1	0	genome.wustl.edu	37	1	16945368	16945370	+	RNA	DEL	GAG	GAG	-	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	GAG	GAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	1	16945368	16945370	GAG	-	DEL	CROCCL1	NR_026752.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.605:0.597:0.582	-	-	-	pseudogene
EIF2S2	0	genome.wustl.edu	37	20	32678367	32678367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	20	32678367	32678367	C	T	SNP	EIF2S2	NM_003908.3	human	genbank	58_37c	-1	reviewed	missense	c.782	p.R261K	1.000	HMMPfam_eIF-5_eIF-2B,HMMSmart_SM00653,superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain	HMMPfam_eIF-5_eIF-2B,HMMSmart_SM00653,superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain,superfamily_Zinc-binding domain of translation initiation factor 2 beta	-	no_errors
ENSG00000198786	0	genome.wustl.edu	37	MT	13655	13655	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	MT	13655	13655	T	C	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	missense	c.1319	p.L440P	NULL	HMMPfam_NADH5_C	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000249603	0	genome.wustl.edu	37	14	65067148	65067148	+	RNA	SNP	A	A	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	14	65067148	65067148	A	C	SNP	ENSG00000249603	ENST00000509438	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
FAM71E2	0	genome.wustl.edu	37	19	55869880	55869903	+	Splice_Site	DEL	GCTCCTTCATCTCGCCCCATGGCT	GCTCCTTCATCTCGCCCCATGGCT	-	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	GCTCCTTCATCTCGCCCCATGGCT	GCTCCTTCATCTCGCCCCATGGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	19	55869880	55869903	GCTCCTTCATCTCGCCCCATGGCT	-	DEL	FAM71E2	ENST00000326479	human	ensembl	58_37c	-1	known	splice_site_del	c.1277-9_1277-1	e2-1	0.004:0.007:0.009:0.011:0.013:0.015:0.016:0.017:0.017:0.017:0.003:0.001:0.000:0.000:0.001:0.005:0.005:0.003:0.001:0.000:0.000:0.001:0.000:0.000	-	-	-	no_errors
G6PC	0	genome.wustl.edu	37	17	41063380	41063380	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	17	41063380	41063380	C	T	SNP	G6PC	NM_000151.2	human	genbank	58_37c	+1	reviewed	silent	c.1011	p.S337	0.042	NULL	HMMPfam_PAP2,HMMSmart_acidPPc,superfamily_AcPase_VanPerase	-	no_errors
KCNMB3	0	genome.wustl.edu	37	3	178984451	178984451	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	3	178984451	178984451	C	T	SNP	KCNMB3	NM_171828.1	human	genbank	58_37c	-1	reviewed	silent	c.48	p.R16	0.988	NULL	HMMPfam_CaKB,PatternScan_PPASE	-	no_errors
KIF19	0	genome.wustl.edu	37	17	72341085	72341085	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	17	72341085	72341085	C	T	SNP	KIF19	NM_153209.3	human	genbank	58_37c	+1	validated	silent	c.768	p.R256	0.038	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIF2B	0	genome.wustl.edu	37	17	51901204	51901204	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	17	51901204	51901204	C	T	SNP	KIF2B	NM_032559.4	human	genbank	58_37c	+1	validated	silent	c.810	p.F270	0.978	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KRTAP4-11	0	genome.wustl.edu	37	17	39274157	39274157	+	Silent	SNP	G	G	A	rs145503152	byCluster	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	17	39274157	39274157	G	A	SNP	KRTAP4-11	NM_033059.3	human	genbank	58_37c	-1	reviewed	silent	c.411	p.P137	0.329	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
LCT	0	genome.wustl.edu	37	2	136548358	136548358	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	2	136548358	136548358	C	T	SNP	LCT	NM_002299.2	human	genbank	58_37c	-1	reviewed	nonsense	c.5205	p.W1735*	0.998	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat,PatternScan_GLYCOSYL_HYDROL_F1_1,PatternScan_GLYCOSYL_HYDROL_F1_2	-	no_errors
LOC100132247	0	genome.wustl.edu	37	16	22545898	22545898	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	16	22545898	22545898	A	C	SNP	LOC100132247	NM_001135865.1	human	genbank	58_37c	+1	validated	missense	c.1594	p.T532P	0.000	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
LOC653436	0	genome.wustl.edu	37	9	44090355	44090355	+	RNA	SNP	C	C	A	rs76699543	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	9	44090355	44090355	C	A	SNP	LOC653436	XR_042306.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.048	-	-	-	pseudogene
LOC729915	0	genome.wustl.edu	37	5	34191667	34191667	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	5	34191667	34191667	C	G	SNP	LOC729915	XM_001722873.2	human	genbank	58_37c	+1	model	missense	c.1407	p.H469Q	0.044	NULL	NULL	-	no_errors
LOC729915	0	genome.wustl.edu	37	5	34191671	34191671	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	5	34191671	34191671	A	G	SNP	LOC729915	XM_001722873.2	human	genbank	58_37c	+1	model	missense	c.1411	p.N471D	0.047	NULL	NULL	-	no_errors
MST1P9	0	genome.wustl.edu	37	1	17086085	17086086	+	RNA	INS	-	-	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	1	17086085	17086086	-	C	INS	MST1P9	NR_002729.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.998:0.997	-	-	-	pseudogene
MUC4	0	genome.wustl.edu	37	3	195510937	195510937	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	3	195510937	195510937	G	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.7514	p.A2505G	0.011	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC6	0	genome.wustl.edu	37	11	1018316	1018316	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	11	1018316	1018316	G	A	SNP	MUC6	NM_005961.2	human	genbank	58_37c	-1	validated	silent	c.4485	p.S1495	0.053	NULL	HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,HMMSmart_SM00215,HMMPfam_C8,HMMPfam_TIL	-	no_errors
NBPF14	0	genome.wustl.edu	37	1	148009349	148009349	+	Missense_Mutation	SNP	A	A	G	rs141981140	byFrequency	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	1	148009349	148009349	A	G	SNP	NBPF14	NM_015383.1	human	genbank	58_37c	-1	predicted	missense	c.1958	p.M653T	0.000	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors
OR4D10	0	genome.wustl.edu	37	11	59245266	59245266	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	11	59245266	59245266	C	T	SNP	OR4D10	NM_001004705.1	human	genbank	58_37c	+1	provisional	nonsense	c.364	p.R122*	0.463	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR5K2	0	genome.wustl.edu	37	3	98217148	98217148	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	3	98217148	98217148	C	T	SNP	OR5K2	NM_001004737.1	human	genbank	58_37c	+1	provisional	silent	c.624	p.V208	0.477	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PEG10	0	genome.wustl.edu	37	7	94293359	94293359	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	7	94293359	94293359	G	A	SNP	PEG10	NM_001040152.1	human	genbank	58_37c	+1	reviewed	missense	c.491	p.R164Q	0.162	HMMPfam_Retrotrans_gag	HMMPfam_zf-CCHC,HMMSmart_ZnF_C2HC,HMMPfam_Retrotrans_gag	-	no_errors
PIGN	0	genome.wustl.edu	37	18	59749915	59749915	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	18	59749915	59749915	G	A	SNP	PIGN	NM_012327.5	human	genbank	58_37c	-1	reviewed	missense	c.2567	p.S856L	1.000	HMMPfam_PigN	HMMPfam_Phosphodiest,superfamily_Alkaline_phosphatase_core,HMMPfam_PigN	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G	rs121913279	byCluster	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POLG	0	genome.wustl.edu	37	15	89866675	89866676	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	15	89866675	89866676	-	T	INS	POLG	NM_001126131.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.2225_2224	p.V742fs	1.000:1.000	HMMPfam_DNA_pol_A,superfamily_SSF56672	HMMPfam_DNA_pol_A,HMMSmart_POLAc,PatternScan_DNA_POLYMERASE_A,superfamily_SSF56672	-	no_errors
POLG	0	genome.wustl.edu	37	15	89866678	89866679	+	In_Frame_Ins	INS	-	-	CCTTAC	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	15	89866678	89866679	-	CCTTAC	INS	POLG	NM_001126131.1	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.2222_2221	p.741in_frame_insGK	0.999:1.000	HMMPfam_DNA_pol_A,superfamily_SSF56672	HMMPfam_DNA_pol_A,HMMSmart_POLAc,PatternScan_DNA_POLYMERASE_A,superfamily_SSF56672	-	no_errors
SCMH1	0	genome.wustl.edu	37	1	41582666	41582666	+	Silent	SNP	C	C	T	rs143668109	byFrequency	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	1	41582666	41582666	C	T	SNP	SCMH1	NM_001031694.2	human	genbank	58_37c	-1	validated	silent	c.399	p.A133	0.265	HMMPfam_MBT,superfamily_Tudor/PWWP/MBT	HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_MBT,HMMSmart_SM00561,superfamily_SAM/Pointed domain,superfamily_Tudor/PWWP/MBT	-	no_errors
TESK1	0	genome.wustl.edu	37	9	35608979	35608979	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	9	35608979	35608979	A	G	SNP	TESK1	NM_006285.2	human	genbank	58_37c	+1	reviewed	missense	c.1121	p.N374S	0.737	NULL	PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TLE3	0	genome.wustl.edu	37	15	70345629	70345629	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	15	70345629	70345629	G	T	SNP	TLE3	NM_005078.2	human	genbank	58_37c	-1	validated	missense	c.1920	p.N640K	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	HMMSmart_SM00320,HMMPfam_TLE_N,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TNXB	0	genome.wustl.edu	37	6	32010230	32010230	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	6	32010230	32010230	A	C	SNP	TNXB	NM_019105.6	human	genbank	58_37c	-1	reviewed	splice_site	c.12204+2	e39+2	1.000	-	-	-	no_errors
TP53TG5	0	genome.wustl.edu	37	20	44003687	44003687	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	20	44003687	44003687	G	C	SNP	TP53TG5	NM_014477.2	human	genbank	58_37c	-1	validated	missense	c.760	p.P254A	0.000	NULL	NULL	-	no_errors
ZMIZ1	0	genome.wustl.edu	37	10	81063837	81063837	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1J2-01A-21D-A13L-09	TCGA-EW-A1J2-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c906931e-dc1a-434c-96cd-58088762f1e7	97b9c0f4-a0c8-4237-ba88-cf1dc993b3ae	10	81063837	81063837	G	T	SNP	ZMIZ1	NM_020338.3	human	genbank	58_37c	+1	validated	missense	c.2191	p.V731L	1.000	superfamily_RING/U-box	HMMPfam_zf-MIZ,superfamily_RING/U-box	-	no_errors
