Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AADACL3	126767	broad.mit.edu	37	1	12776245	12776245	+	5'UTR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48141224	48141224	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD2	225	broad.mit.edu	37	12	39998516	39998516	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44051409	44051409	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35605094	35605094	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOXL	55289	broad.mit.edu	37	2	111556667	111556667	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131308464	131308464	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20486769	20486769	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM4	341392	broad.mit.edu	37	12	7475174	7475174	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106234219	106234219	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43777813	43777813	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28296423	28296423	+	Silent	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1881987	1881987	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148037652	148037652	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125856491	125856492	+	Intron	INS	-	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH5A1	7915	broad.mit.edu	37	6	24504939	24504939	+	Intron	DEL	G	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMD1	262	broad.mit.edu	37	6	111214177	111214177	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMTN	401138	broad.mit.edu	37	4	71390668	71390668	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41554022	41554022	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A4	728747	broad.mit.edu	37	9	69420407	69420407	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45795743	45795743	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA3	306	broad.mit.edu	37	4	79522696	79522696	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29400673	29400673	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21230206	21230206	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21246397	21246397	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21260849	21260849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57274406	57274406	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP2	23647	broad.mit.edu	37	11	6500372	6500372	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11162223	11162223	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11308583	11308583	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156914841	156914841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176853723	176853723	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96798623	96798623	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152826288	152826288	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5SL	55101	broad.mit.edu	37	19	41937300	41937300	+	3'UTR	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1L	92270	broad.mit.edu	37	5	81608494	81608494	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1800481	1800481	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUH	549	broad.mit.edu	37	9	94060310	94060310	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN2	8313	broad.mit.edu	37	17	63534419	63534419	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79182788	79182788	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2	10458	broad.mit.edu	37	17	79027404	79027404	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BASP1	10409	broad.mit.edu	37	5	17275921	17275921	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11B	64919	broad.mit.edu	37	14	99724120	99724120	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93695424	93695424	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112654685	112654685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf54	121273	broad.mit.edu	37	12	48888730	48888730	+	3'UTR	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf5	57103	broad.mit.edu	37	12	4430600	4430600	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf5	57103	broad.mit.edu	37	12	4446419	4446419	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf26	122046	broad.mit.edu	37	13	31513891	31513891	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf37	145407	broad.mit.edu	37	14	58471506	58471506	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf62	57020	broad.mit.edu	37	16	19663257	19663257	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf64	124773	broad.mit.edu	37	17	58504024	58504024	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf2	8725	broad.mit.edu	37	19	30502220	30502220	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf127	148345	broad.mit.edu	37	1	11008316	11008316	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75037769	75037769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf200	253868	broad.mit.edu	37	20	61143804	61143804	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf46	55321	broad.mit.edu	37	20	1161882	1161882	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf56	55471	broad.mit.edu	37	2	37474741	37474742	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf32	51066	broad.mit.edu	37	3	8667996	8667996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40955692	40955692	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf79	286234	broad.mit.edu	37	9	90498132	90498132	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150235024	150235024	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181620455	181620455	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201022461	201022461	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201035572	201035572	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201044702	201044702	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24373225	24373225	+	3'UTR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12833076	12833076	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN10	11132	broad.mit.edu	37	2	241537926	241537926	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC3	22794	broad.mit.edu	37	17	38297884	38297884	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP3	836	broad.mit.edu	37	4	185550702	185550702	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116310859	116310859	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX3	11335	broad.mit.edu	37	7	26248069	26248069	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBP2	1238	broad.mit.edu	37	3	42906917	42906917	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219878823	219878823	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144NL	339184	broad.mit.edu	37	17	20796673	20796673	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74A	90557	broad.mit.edu	37	2	132288474	132288474	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC94	55702	broad.mit.edu	37	19	4267771	4267771	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262871	158262871	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD276	80381	broad.mit.edu	37	15	74002065	74002065	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP2	200008	broad.mit.edu	37	1	54606724	54606724	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95158483	95158483	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31323229	31323229	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85961589	85961589	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM20	125931	broad.mit.edu	37	19	45024811	45024811	+	Intron	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214818476	214818476	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49030736	49030736	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49541920	49541920	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40192537	40192537	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	424293	424293	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	436356	436356	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233398943	233398943	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST11	50515	broad.mit.edu	37	12	104851171	104851171	+	5'UTR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86900337	86900337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18B	497190	broad.mit.edu	37	16	74443682	74443682	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4C	170482	broad.mit.edu	37	12	7883263	7883263	+	Intron	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP3	25999	broad.mit.edu	37	19	36508689	36508689	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPB	81570	broad.mit.edu	37	11	72028186	72028186	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6	57472	broad.mit.edu	37	5	180001285	180001285	+	3'UTR	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121208961	121208961	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94027025	94027025	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139890410	139890410	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110831815	110831815	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137704349	137704349	+	Splice_Site	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPD	1362	broad.mit.edu	37	17	28791816	28791816	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197390532	197390532	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43907550	43907550	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF2	64109	broad.mit.edu	37	X	1321261	1321261	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3889486	3889486	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113240885	113240885	+	Intron	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113529134	113529134	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG4	1464	broad.mit.edu	37	15	75975009	75975009	+	Silent	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST9	128822	broad.mit.edu	37	20	23586393	23586393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33112197	33112197	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSG	1511	broad.mit.edu	37	14	25044428	25044428	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117417645	117417645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC25	54883	broad.mit.edu	37	17	36958856	36958856	+	Intron	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP1	23191	broad.mit.edu	37	15	22925774	22925774	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM1	23002	broad.mit.edu	37	14	59789426	59789426	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155708099	155708099	+	3'UTR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4	10926	broad.mit.edu	37	7	87514240	87514240	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155278377	155278377	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74594271	74594271	+	Intron	SNP	C	G	G	rs138678534	by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118572487	118572487	+	Intron	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70666761	70666761	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DET1	55070	broad.mit.edu	37	15	89070888	89070888	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX30	22907	broad.mit.edu	37	3	47852151	47852151	+	5'UTR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61538454	61538454	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61542643	61542643	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO3	1735	broad.mit.edu	37	14	102028496	102028497	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	12944032	12944032	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31241077	31241077	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21904422	21904422	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11568477	11568477	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132225951	132225951	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169507382	169507382	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73220047	73220047	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162875206	162875206	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154172027	154172027	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP9	91039	broad.mit.edu	37	19	4685763	4685763	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146777432	146777432	+	Intron	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45391598	45391598	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71797543	71797543	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECEL1	9427	broad.mit.edu	37	2	233349431	233349431	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	69250452	69250452	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	43936185	43936185	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55218947	55218947	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP4	26610	broad.mit.edu	37	11	31669325	31669325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97124023	97124023	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8	2059	broad.mit.edu	37	12	15777398	15777398	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23721608	23721608	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197029605	197029605	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139164306	139164306	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15326063	15326063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM59A	64762	broad.mit.edu	37	18	29992451	29992452	+	Intron	DNP	CC	AA	AA			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131830407	131830407	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92A3	403315	broad.mit.edu	37	4	183959141	183959141	+	RNA	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR1	84188	broad.mit.edu	37	11	13733229	13733229	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD2	22868	broad.mit.edu	37	2	207631989	207631989	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15936997	15936997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO18	84893	broad.mit.edu	37	10	5955655	5955655	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO43	286151	broad.mit.edu	37	8	101146709	101146709	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161514851	161514851	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102379249	102379249	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFRL1	53834	broad.mit.edu	37	4	1018528	1018528	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL2	2274	broad.mit.edu	37	2	105977987	105977987	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL5	9457	broad.mit.edu	37	6	97053871	97053871	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84530750	84530750	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240351389	240351389	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	172003851	172003851	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ3	22887	broad.mit.edu	37	1	42647570	42647570	+	Intron	SNP	T	A	A	rs112546829		TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXO3	2309	broad.mit.edu	37	6	108985039	108985039	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39261752	39261752	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135438905	135438905	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52186866	52186866	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48536685	48536685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32660242	32660242	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162376242	162376242	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FST	10468	broad.mit.edu	37	5	52781100	52781100	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC	2538	broad.mit.edu	37	17	41055867	41055867	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161324188	161324188	+	Silent	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA5	2558	broad.mit.edu	37	15	27185181	27185181	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL	51083	broad.mit.edu	37	11	68455487	68455487	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9820602	9820602	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA	2629	broad.mit.edu	37	1	155207330	155207330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27723938	27723938	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27731038	27731039	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120565869	120565869	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120582655	120582655	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120613618	120613618	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT2	2651	broad.mit.edu	37	6	10556946	10556946	+	Intron	SNP	A	G	G	rs55988612		TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD2	54857	broad.mit.edu	37	X	69649975	69649975	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33448251	33448251	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK2	2712	broad.mit.edu	37	4	80328679	80328679	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKN1	56287	broad.mit.edu	37	2	69204898	69204898	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14550471	14550471	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11872124	11872124	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNLY	10578	broad.mit.edu	37	2	85924772	85924772	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNRHR	2798	broad.mit.edu	37	4	68610569	68610569	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37317244	37317244	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA5	9950	broad.mit.edu	37	14	93305653	93305653	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8C	729786	broad.mit.edu	37	15	20777905	20777905	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPBP1	65056	broad.mit.edu	37	5	56527069	56527069	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPIHBP1	338328	broad.mit.edu	37	8	144297309	144297309	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131590398	131590398	+	Silent	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25886829	25886829	+	Silent	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117121759	117121759	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPT2	84706	broad.mit.edu	37	16	46962902	46962902	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX3	2878	broad.mit.edu	37	5	150407000	150407000	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD4	23151	broad.mit.edu	37	22	47058939	47058939	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB7	2886	broad.mit.edu	37	17	37902578	37902578	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13715944	13715944	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66786504	66786504	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM2	2912	broad.mit.edu	37	3	51743114	51743114	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7620718	7620718	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E1	2960	broad.mit.edu	37	3	120489844	120489844	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1C	9626	broad.mit.edu	37	3	108634993	108634993	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108935446	108935446	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS3	79441	broad.mit.edu	37	4	2242588	2242591	+	Frame_Shift_Del	DEL	CAGT	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45304005	45304005	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242194509	242194509	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC3	8916	broad.mit.edu	37	4	89574037	89574038	+	Frame_Shift_Ins	INS	-	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXDC	284004	broad.mit.edu	37	17	80394589	80394589	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK3	3101	broad.mit.edu	37	5	176308305	176308305	+	Silent	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA0	10949	broad.mit.edu	37	5	137089549	137089549	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA1	3178	broad.mit.edu	37	12	54674445	54674445	+	5'Flank	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26236821	26236821	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMEZ	57594	broad.mit.edu	37	14	23746238	23746238	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK3	84376	broad.mit.edu	37	8	42814476	42814476	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191540	152191540	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118460383	118460383	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATSF1	27336	broad.mit.edu	37	X	135592243	135592243	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3C	170572	broad.mit.edu	37	3	183777928	183777928	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53652847	53652852	+	Intron	DEL	GCCGGT	-	-	rs11091285	by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44L	10964	broad.mit.edu	37	1	79107250	79107250	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP2	10644	broad.mit.edu	37	3	185363402	185363402	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160063683	160063683	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RB	53833	broad.mit.edu	37	3	136700997	136700997	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86393849	86393849	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41730009	41730009	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSM2	84684	broad.mit.edu	37	14	36004201	36004201	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF8	3394	broad.mit.edu	37	16	85945192	85945192	+	Silent	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48148423	48148423	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48148712	48148713	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173340413	173340413	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15573137	15573137	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31374568	31374568	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGBL1	9358	broad.mit.edu	37	13	102105283	102105286	+	Splice_Site	DEL	GTAA	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156644821	156644821	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVL	3713	broad.mit.edu	37	1	152882670	152882670	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740193	62740193	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318852	21318852	+	Silent	SNP	C	A	A	rs149992288	byFrequency	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88652442	88652442	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88729728	88729728	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62038665	62038665	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73879384	73879384	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10600477	10600477	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27772805	27772805	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57179457	57179457	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28106288	28106288	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10407885	10407886	+	Splice_Site	DNP	GG	AT	AT			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF20B	9585	broad.mit.edu	37	10	91483930	91483930	+	Intron	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF25	3834	broad.mit.edu	37	6	168443498	168443498	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57969064	57969064	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55340905	55340905	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55044125	55044125	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK5	25818	broad.mit.edu	37	19	51446843	51446843	+	3'UTR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK7	5650	broad.mit.edu	37	19	51483646	51483646	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135011939	135011939	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT25	147183	broad.mit.edu	37	17	38905419	38905419	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-2	85291	broad.mit.edu	37	17	39334304	39334304	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-2	337967	broad.mit.edu	37	21	31973402	31973402	+	5'Flank	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAD1	3898	broad.mit.edu	37	1	201351970	201351970	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7080155	7080155	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49165960	49165961	+	Missense_Mutation	DNP	GC	CA	CA			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209801421	209801421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2B	26239	broad.mit.edu	37	1	152659153	152659153	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAP1	26119	broad.mit.edu	37	1	25880433	25880433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71978097	71978097	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX8	431707	broad.mit.edu	37	1	75608973	75608973	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55142908	55142908	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIM2	3982	broad.mit.edu	37	19	51890381	51890381	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156518480	156518480	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC153328	153328	broad.mit.edu	37	5	135188390	135188390	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132200903	132200903	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161022177	161022177	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82408764	82408764	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62641177	62641177	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	142004803	142004803	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC27	80313	broad.mit.edu	37	10	134188652	134188652	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC40	55631	broad.mit.edu	37	1	70641659	70641659	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC49	54839	broad.mit.edu	37	15	71152436	71152436	+	Intron	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8C	84230	broad.mit.edu	37	1	90179493	90179493	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204587527	204587527	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM11	134353	broad.mit.edu	37	5	157174552	157174552	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM11	134353	broad.mit.edu	37	5	157181018	157181018	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33499869	33499869	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB16	139604	broad.mit.edu	37	X	35820818	35820818	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75652055	75652055	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K12	7786	broad.mit.edu	37	12	53875772	53875772	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K12	7786	broad.mit.edu	37	12	53876414	53876414	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179666965	179666965	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH8	220972	broad.mit.edu	37	10	45956584	45956584	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK4	57787	broad.mit.edu	37	19	45762388	45762388	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126754978	126754978	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF6	1953	broad.mit.edu	37	1	3424283	3424283	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEI1	150365	broad.mit.edu	37	22	42150063	42150063	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116403424	116403424	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4B	11282	broad.mit.edu	37	5	179225653	179225653	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42041781	42041781	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL2	9645	broad.mit.edu	37	11	12229372	12229372	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MINA	84864	broad.mit.edu	37	3	97685865	97685865	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR575	693160	broad.mit.edu	37	4	83674509	83674509	+	RNA	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKNK1	8569	broad.mit.edu	37	1	47030775	47030775	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154884701	154884701	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORN1	79906	broad.mit.edu	37	1	2268065	2268065	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL9	65005	broad.mit.edu	37	1	151734125	151734125	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59857910	59857910	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH6	2956	broad.mit.edu	37	2	48027856	48027856	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLNL	401827	broad.mit.edu	37	16	823017	823017	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD2L	441024	broad.mit.edu	37	4	75065547	75065547	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29881649	29881649	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9077163	9077163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1080962	1080962	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77656020	77656020	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10210316	10210316	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10314198	10314198	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL10	93408	broad.mit.edu	37	7	101267507	101267507	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18058480	18058480	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128389269	128389269	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72146723	72146723	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST2	11143	broad.mit.edu	37	17	47872934	47872934	+	Intron	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41949464	41949464	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAMPT	10135	broad.mit.edu	37	7	105903983	105903983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L2	4674	broad.mit.edu	37	X	72434120	72434120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS2	79731	broad.mit.edu	37	11	78152269	78152269	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152467414	152467414	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB1	64168	broad.mit.edu	37	8	91937918	91937918	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD1	121441	broad.mit.edu	37	12	97331233	97331233	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK5	341676	broad.mit.edu	37	13	52678775	52678775	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK7	140609	broad.mit.edu	37	1	198222102	198222102	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70417886	70417886	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204982042	204982042	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHLRC3	387921	broad.mit.edu	37	13	39622188	39622188	+	3'UTR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52521051	52521051	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54318296	54318296	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56459698	56459698	+	Intron	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56223080	56223080	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15174810	15174810	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43656049	43656049	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26114745	26114745	+	Silent	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26114747	26114747	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69320507	69320507	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTX2	4885	broad.mit.edu	37	7	98245928	98245928	+	5'Flank	DEL	C	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2C2AP	126382	broad.mit.edu	37	19	19313820	19313820	+	Intron	DEL	A	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115357650	115357650	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRD1	4898	broad.mit.edu	37	1	52343944	52343944	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64402833	64402833	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79175581	79175581	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229588306	229588306	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28096577	28096577	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161970075	161970075	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A3	26496	broad.mit.edu	37	11	7960643	7960643	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H12	440153	broad.mit.edu	37	14	19378076	19378076	+	Silent	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1D4	8385	broad.mit.edu	37	17	2966252	2966252	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J1	347168	broad.mit.edu	37	9	125239348	125239348	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247694786	247694786	+	3'UTR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247768887	247768887	+	5'Flank	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185239	248185239	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248223817	248223817	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263535	248263535	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M1P	388762	broad.mit.edu	37	1	248285296	248285296	+	5'Flank	DEL	C	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308920	248308920	+	Silent	SNP	C	T	T	rs146433942		TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248457981	248457981	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A4	390756	broad.mit.edu	37	17	3213643	3213643	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612554	20612554	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216428	20216428	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661687	4661687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703060	55703060	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E5P	219445	broad.mit.edu	37	11	55746825	55746825	+	3'UTR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55904471	55904471	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26691312	26691312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPN1	8106	broad.mit.edu	37	14	23777951	23777951	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34663999	34663999	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP11	57097	broad.mit.edu	37	12	3949591	3949591	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVA	55742	broad.mit.edu	37	11	12549675	12549675	+	3'UTR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE2	399967	broad.mit.edu	37	11	125648242	125648242	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH12	51294	broad.mit.edu	37	5	141335023	141335023	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255747	140255747	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140207895	140207895	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140502904	140502904	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140517152	140517152	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553013	140553013	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140736243	140736243	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140784669	140784669	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54967536	54967536	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144931038	144931038	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA4	9601	broad.mit.edu	37	7	148709033	148709033	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5B	23047	broad.mit.edu	37	13	33344830	33344830	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAP2	27315	broad.mit.edu	37	11	3845193	3845193	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58322818	58322818	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	514917	514919	+	In_Frame_Del	DEL	AGC	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71404253	71404253	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1C	23396	broad.mit.edu	37	19	3664855	3664855	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47853651	47853651	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81181802	81181802	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102056094	102056094	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110424452	110424452	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC8L1	153770	broad.mit.edu	37	5	145464208	145464208	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8639399	8639399	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131953380	131953380	+	Intron	DEL	A	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN2	123	broad.mit.edu	37	9	19126429	19126429	+	5'UTR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK4	10733	broad.mit.edu	37	4	128814717	128814717	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC1	57125	broad.mit.edu	37	17	37295841	37295841	+	Intron	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118355764	118355764	+	Silent	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP2	5408	broad.mit.edu	37	10	118380436	118380436	+	5'Flank	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP2	5408	broad.mit.edu	37	10	118380792	118380792	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODXL	5420	broad.mit.edu	37	7	131195485	131195485	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POFUT1	23509	broad.mit.edu	37	20	30818946	30818946	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405880	7405880	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405883	7405883	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3E	55718	broad.mit.edu	37	16	22328212	22328212	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARG	5468	broad.mit.edu	37	3	12458199	12458199	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPCS	79717	broad.mit.edu	37	1	42922700	42922700	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70221071	70221071	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1H	57460	broad.mit.edu	37	12	63042381	63042381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R2P3	153743	broad.mit.edu	37	5	156277687	156277687	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM14	63978	broad.mit.edu	37	8	70982089	70982089	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23510018	23510018	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68989772	68989772	+	Intron	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRF1	5551	broad.mit.edu	37	10	72360447	72360447	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186278009	186278009	+	Missense_Mutation	SNP	G	T	T	rs149799261	by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCA	5578	broad.mit.edu	37	17	64770156	64770156	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	23847679	23847679	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCDBP	112464	broad.mit.edu	37	11	6340270	6340270	+	3'UTR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30103853	30103853	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD2	25865	broad.mit.edu	37	19	47194987	47194987	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF38B	55119	broad.mit.edu	37	1	109241810	109241810	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS50	29122	broad.mit.edu	37	3	46758935	46758935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227073496	227073496	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43348951	43348951	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23713903	23713903	+	5'UTR	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPDC1	138639	broad.mit.edu	37	9	96860223	96860223	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198703380	198703380	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8406167	8406167	+	3'UTR	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1667444	1667444	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174190032	174190032	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1P	83956	broad.mit.edu	37	12	45458055	45458055	+	RNA	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170679606	170679606	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109399221	109399221	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1C	255426	broad.mit.edu	37	5	179541565	179541565	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80376481	80376481	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80503114	80503114	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM10	8241	broad.mit.edu	37	X	47041247	47041247	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM10	8241	broad.mit.edu	37	X	47046078	47046078	+	3'UTR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM15B	29890	broad.mit.edu	37	3	51431352	51431353	+	Frame_Shift_Ins	INS	-	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS9BP	388531	broad.mit.edu	37	19	33167115	33167115	+	5'UTR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC3	79608	broad.mit.edu	37	11	8161742	8161742	+	Splice_Site	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPK4	54101	broad.mit.edu	37	21	43161537	43161537	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF165	494470	broad.mit.edu	37	18	44013518	44013518	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5800722	5800722	+	Translation_Start_Site	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF31	55072	broad.mit.edu	37	14	24620512	24620512	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF31	55072	broad.mit.edu	37	14	24620762	24620762	+	Silent	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124744018	124744018	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPP14	11102	broad.mit.edu	37	3	58296435	58296435	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO2	340419	broad.mit.edu	37	8	108995218	108995218	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237656365	237656365	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237730113	237730113	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD13	148418	broad.mit.edu	37	1	84791262	84791262	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15870655	15870655	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASS6	163786	broad.mit.edu	37	1	100553652	100553652	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO2	22904	broad.mit.edu	37	19	1110949	1110949	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110454835	110454836	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119745843	119745843	+	Silent	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83610721	83610721	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151110269	151110269	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48055321	48055321	+	Intron	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063266	48063266	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76385774	76385774	+	Intron	SNP	A	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76385785	76385785	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPN1	57190	broad.mit.edu	37	1	26131624	26131624	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30991099	30991099	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B2	10603	broad.mit.edu	37	7	101957935	101957935	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GLB1	51100	broad.mit.edu	37	1	87195890	87195890	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19650023	19650023	+	Silent	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM2	357	broad.mit.edu	37	X	9862711	9862711	+	Missense_Mutation	SNP	G	T	T	rs111899727	byFrequency	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK2	23235	broad.mit.edu	37	11	111594606	111594606	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164767647	164767647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L2	23517	broad.mit.edu	37	5	54618257	54618257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A3	6572	broad.mit.edu	37	10	50818982	50818983	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107427603	107427603	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC29A4	222962	broad.mit.edu	37	7	5327485	5327485	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A10	55532	broad.mit.edu	37	1	220091866	220091866	+	Intron	SNP	G	C	C	rs34618762		TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A3	10991	broad.mit.edu	37	3	50256083	50256083	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A1	6529	broad.mit.edu	37	3	11060301	11060301	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44474186	44474186	+	Silent	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21457403	21457403	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO6A1	133482	broad.mit.edu	37	5	101748746	101748746	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG6	23293	broad.mit.edu	37	17	1964759	1964760	+	3'UTR	INS	-	G	G	rs145926620	by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128844948	128844948	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127638065	127638065	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-11	767589	broad.mit.edu	37	14	101433518	101433518	+	5'Flank	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1271214	1271214	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOCS6	9306	broad.mit.edu	37	18	67993064	67993064	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108371774	108371774	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121427877	121427877	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS2	6655	broad.mit.edu	37	14	50649236	50649236	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX30	11063	broad.mit.edu	37	5	157078599	157078599	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP7	121340	broad.mit.edu	37	12	53722173	53722173	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAST	6683	broad.mit.edu	37	2	32289089	32289089	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35700681	35700681	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41081361	41081361	+	Silent	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSBP3	23648	broad.mit.edu	37	1	54723849	54723849	+	Intron	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149522402	149522402	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53079434	53079434	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIP1	10963	broad.mit.edu	37	11	63964764	63964764	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK24	8428	broad.mit.edu	37	13	99127205	99127205	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN5	140732	broad.mit.edu	37	20	31587901	31587901	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75505590	75505590	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109332689	109332689	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85648290	85648290	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT3	84258	broad.mit.edu	37	19	51128409	51128409	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB2	23118	broad.mit.edu	37	6	149691007	149691007	+	Intron	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF7L	54457	broad.mit.edu	37	X	100531263	100531263	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	159860648	159860648	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA3	6920	broad.mit.edu	37	1	23723999	23723999	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCOF1	6949	broad.mit.edu	37	5	149771185	149771185	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDO2	6999	broad.mit.edu	37	4	156831138	156831138	+	Intron	DEL	C	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104464825	104464825	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65146835	65146835	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX9	374618	broad.mit.edu	37	15	56657645	56657645	+	5'UTR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB1I1	7041	broad.mit.edu	37	16	31484820	31484820	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44916184	44916184	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43584108	43584108	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134144265	134144265	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEMIS	387357	broad.mit.edu	37	6	128134393	128134393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC7	79905	broad.mit.edu	37	16	19068087	19068087	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	125834059	125834059	+	Silent	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129559341	129559341	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6A	27327	broad.mit.edu	37	16	24802953	24802953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS4	84951	broad.mit.edu	37	17	38636951	38636951	+	Splice_Site	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18047062	18047062	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM1	7168	broad.mit.edu	37	15	63362066	63362066	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP1	1200	broad.mit.edu	37	11	6636248	6636248	+	Intron	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20077267	20077267	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42235266	42235266	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	140922242	140922242	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREX2	11219	broad.mit.edu	37	X	152710691	152710691	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140409919	140409919	+	Missense_Mutation	SNP	G	T	T	rs115301879	byFrequency;by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM71	131405	broad.mit.edu	37	3	32860298	32860298	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC3	7222	broad.mit.edu	37	4	122853479	122853479	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111090328	111090328	+	Intron	DEL	G	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111195133	111195133	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3446929	3446929	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC15	51112	broad.mit.edu	37	2	3469328	3469328	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC37	9652	broad.mit.edu	37	5	94863597	94863597	+	Intron	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL10	254173	broad.mit.edu	37	1	1118337	1118337	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179421984	179421984	+	Silent	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48106930	48106930	+	Silent	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA2	10054	broad.mit.edu	37	19	34922808	34922808	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10155625	10155625	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR3	130507	broad.mit.edu	37	2	170871812	170871812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19433433	19433433	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19443790	19443790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCHL5	51377	broad.mit.edu	37	1	192985378	192985378	+	3'UTR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96599451	96599451	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35968187	35968187	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5CL	222643	broad.mit.edu	37	6	41021223	41021224	+	Intron	DNP	CC	AG	AG			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61697854	61697854	+	5'Flank	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP44	84101	broad.mit.edu	37	12	95927916	95927916	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37553354	37553354	+	IGR	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49860952	49860952	+	IGR	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55071608	55071609	+	IGR	DNP	GG	AT	AT			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55086099	55086099	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56143647	56143647	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71888509	71888509	+	IGR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94646916	94646916	+	IGR	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	98437417	98437417	+	IGR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10659114	10659114	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115026456	115026456	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9555195	9555196	+	IGR	INS	-	C	C	rs140281398	by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19241311	19241311	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57387795	57387795	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57387797	57387797	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65884954	65884954	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66362341	66362341	+	IGR	DEL	C	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	82264983	82264983	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90823609	90823609	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	103830946	103830946	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19123651	19123651	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806932	19806932	+	IGR	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146328	20146328	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147194	20147194	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	29142990	29142990	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44010472	44010472	+	IGR	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44546823	44546823	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45330637	45330637	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	60679210	60679210	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20087469	20087469	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20445970	20445970	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20467310	20467310	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31745839	31745839	+	IGR	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	43993461	43993461	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	12975054	12975054	+	IGR	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32391319	32391319	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32489331	32489331	+	IGR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32823684	32823684	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605430	33605430	+	IGR	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34727523	34727523	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48093455	48093455	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	58810394	58810394	+	IGR	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11913844	11913844	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	23784957	23784957	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23780268	23780268	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23780270	23780270	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120147910	120147910	+	IGR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149093106	149093106	+	IGR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247394713	247394713	+	IGR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798225	21798225	+	IGR	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24780415	24780415	+	IGR	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16953609	16953609	+	IGR	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	44879533	44879533	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106987501	106987501	+	IGR	DEL	C	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132354527	132354527	+	IGR	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175165271	175165271	+	IGR	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	223591232	223591232	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	35696777	35696777	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31496393	31496393	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36673411	36673411	+	IGR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113037891	113037891	+	IGR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13340227	13340227	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190903412	190903412	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	22595994	22595994	+	IGR	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	78909065	78909065	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105751708	105751708	+	IGR	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	10664504	10664504	+	IGR	SNP	A	T	T	rs147295504	by1000genomes	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	130330771	130330771	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14653230	14653230	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304095	20304095	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304441	20304441	+	IGR	SNP	T	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23303647	23303647	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27375734	27375734	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803154	66803154	+	IGR	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	72295253	72295253	+	IGR	DEL	G	-	-			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	81265506	81265506	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85998163	85998163	+	IGR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	21260332	21260332	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27531555	27531555	+	IGR	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	32511163	32511163	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57071411	57071411	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020646	63020646	+	IGR	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63159745	63159745	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63924261	63924261	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84612819	84612819	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	127085567	127085567	+	IGR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	30778864	30778864	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	128777987	128777987	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	141031719	141031719	+	IGR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179464	26179464	+	IGR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179483	26179483	+	IGR	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27536573	27536573	+	IGR	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79815719	79815719	+	IGR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219295487	219295487	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53762540	53762540	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100454673	100454673	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2846896	2846898	+	Nonsense_Mutation	TNP	CGA	ATT	ATT	rs141400236	byFrequency	TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS53	55275	broad.mit.edu	37	17	600720	600720	+	Missense_Mutation	SNP	G	T	T	rs138068150		TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS53	55275	broad.mit.edu	37	17	600722	600722	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM1	284415	broad.mit.edu	37	19	54544178	54544178	+	3'UTR	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP2NL	164684	broad.mit.edu	37	22	42343203	42343203	+	Intron	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR33	55339	broad.mit.edu	37	2	128481892	128481892	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30999102	30999102	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73065721	73065721	+	RNA	SNP	T	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YES1	7525	broad.mit.edu	37	18	724522	724522	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207172862	207172862	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72830619	72830619	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP36L1	677	broad.mit.edu	37	14	69259708	69259708	+	5'UTR	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68272236	68272236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58579319	58579319	+	Silent	SNP	A	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58579321	58579321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44470819	44470819	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38120804	38120804	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF286B	729288	broad.mit.edu	37	17	18575737	18575737	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53302177	53302177	+	3'UTR	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188666	57188666	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30934586	30934586	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF616	90317	broad.mit.edu	37	19	52633940	52633940	+	Intron	SNP	C	G	G			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF664	144348	broad.mit.edu	37	12	124496938	124496938	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363270	22363270	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	55980293	55980293	+	5'Flank	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57529433	57529433	+	Silent	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF718	255403	broad.mit.edu	37	4	155375	155375	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF761	388561	broad.mit.edu	37	19	53952872	53952872	+	Silent	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53989993	53989993	+	Silent	SNP	T	C	C			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNHIT2	741	broad.mit.edu	37	11	64884413	64884413	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238048738	238048738	+	Silent	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102312716	102312716	+	RNA	SNP	G	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	30433044	30433044	+	5'Flank	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34739716	34739716	+	RNA	SNP	G	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89496168	89496168	+	Intron	SNP	C	T	T			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142120226	142120226	+	Intron	SNP	C	A	A			TCGA-05-4418-01A-01D-1265-08	TCGA-05-4418-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
