Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
EIF4G3	8672	genome.wustl.edu	37	1	21307677	21307677	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_003760.3	-1	validated	p.P25L	1.000	107	0%	38	44.7%	-	-	possibly_damaging(0.927)	deleterious(0.01)	deleterious(0.780)	NULL
ARID1A	8289	genome.wustl.edu	37	1	27056246	27056253	+	Frame_Shift_Del	DEL	ACATGGGT	ACATGGGT	-	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	ACATGGGT	ACATGGGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006015.4	+1	reviewed	p.H415fs	1.000:1.000:1.000:0.995:1.000:1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
ARID1A	8289	genome.wustl.edu	37	1	27107093	27107093	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006015.4	+1	reviewed	p.R2236fs	1.000	-	-	-	-	-	-	-	-	-	NULL
GJB3	2707	genome.wustl.edu	37	1	35250842	35250842	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001005752.1	+1	reviewed	p.R160H	1.000	143	0%	55	38.2%	-	-	possibly_damaging(0.522)	tolerated(0.52)	neutral(0.184)	HMMPfam_Connexin_CCC
HRNR	388697	genome.wustl.edu	37	1	152193217	152193217	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001009931.1	-1	validated	p.H296	0.000	184	0%	38	36.8%	-	-	-	-	-	NULL
FAM177B	400823	genome.wustl.edu	37	1	222920028	222920028	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_207468.2	+1	validated	p.K47	0.145	213	0%	71	31%	-	-	-	-	-	NULL
FAM89A	375061	genome.wustl.edu	37	1	231155819	231155819	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_198552.2	-1	validated	p.Y115	0.983	78	1.3%	24	33.3%	-	-	-	-	-	NULL
NRXN1	9378	genome.wustl.edu	37	2	50463974	50463974	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001135659.1	-1	reviewed	p.R1207*	1.000	100	0%	66	22.7%	-	-	-	-	-	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
SLC1A4	6509	genome.wustl.edu	37	2	65245367	65245367	+	Silent	SNP	A	A	G	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_003038.3	+1	validated	p.V399	0.000	256	0%	60	30%	-	-	-	-	-	HMMPfam_SDF
CTNNB1	1499	genome.wustl.edu	37	3	41266137	41266137	+	Missense_Mutation	SNP	C	C	T	rs121913409	byCluster	TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001098209.1	+1	reviewed	p.S45F	1.000	79	0%	25	32%	-	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
MAGI1	9223	genome.wustl.edu	37	3	65425560	65425561	+	In_Frame_Ins	INS	-	-	CTG	rs113903140		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001033057.1	-1	reviewed	p.421in_frame_insQ	0.208:0.001	-	-	-	-	-	-	-	-	-	NULL
ST3GAL6	10402	genome.wustl.edu	37	3	98512538	98512539	+	Frame_Shift_Ins	INS	-	-	TGCAGAGCAGCTCTTT	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006100.2	+1	provisional	p.Q314fs	1.000:0.992	-	-	-	-	-	-	-	-	-	HMMPfam_Glyco_transf_29
C3orf56	285311	genome.wustl.edu	37	3	126916433	126916434	+	RNA	INS	-	-	TTC	rs10623171	byCluster	TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	XR_078289.1	+1	model	NULL	0.043:0.029	-	-	-	-	-	-	-	-	-	-
ABTB1	80325	genome.wustl.edu	37	3	127396128	127396128	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_172027.2	+1	reviewed	p.R254Q	0.975	50	0%	13	30.8%	-	-	probably_damaging(0.997)	deleterious(0.05)	deleterious(0.811)	NULL
XRN1	54464	genome.wustl.edu	37	3	142119311	142119311	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_019001.3	-1	validated	p.V728M	1.000	106	0%	60	25%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	byCluster	TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006218.2	+1	reviewed	p.E545K	1.000	119	0%	87	35.6%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold
MAB21L2	10586	genome.wustl.edu	37	4	151504531	151504531	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006439.4	+1	reviewed	p.I117T	1.000	46	0%	15	60%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Mab-21
HMGCS1	3157	genome.wustl.edu	37	5	43292694	43292694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001098272.1	-1	validated	p.T452M	1.000	93	0%	50	40%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMG_CoA_synt_C,superfamily_Thiolase-like
DUSP22	56940	genome.wustl.edu	37	6	335142	335142	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_020185.3	+1	provisional	p.A56V	0.989	143	0%	101	20.8%	-	-	benign(0.035)	tolerated(0.44)	neutral(0.015)	HMMPfam_DSPc,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II
HIST1H1E	3008	genome.wustl.edu	37	6	26156898	26156898	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_005321.2	+1	reviewed	p.V94L	1.000	74	0%	23	39.1%	-	-	benign(0.322)	tolerated(0.16)	neutral(0.161)	"HMMPfam_Linker_histone,HMMSmart_SM00526,superfamily_""Winged helix"" DNA-binding domain"
SCML4	256380	genome.wustl.edu	37	6	108041960	108041960	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_198081.3	-1	validated	p.P307L	0.999	70	0%	23	43.5%	-	-	benign(0)	tolerated(0.32)	neutral(0.024)	NULL
TMEM200A	114801	genome.wustl.edu	37	6	130761731	130761731	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_052913.2	+1	provisional	p.I55T	1.000	324	0%	138	35.5%	-	-	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	HMMPfam_DUF2371
HGC6.3	100128124	genome.wustl.edu	37	6	168377029	168377029	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001129895.1	-1	predicted	p.P102S	0.519	71	1.4%	37	27%	-	-	-	-	-	NULL
GPT	2875	genome.wustl.edu	37	8	145732325	145732325	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_005309.2	+1	reviewed	p.R478P	0.963	71	0%	20	60%	-	-	benign(0.421)	tolerated(0.49)	neutral(0.147)	HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major
DNAI1	27019	genome.wustl.edu	37	9	34512420	34512420	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_012144.2	+1	reviewed	p.V496A	0.080	52	0%	20	25%	-	-	benign(0.004)	tolerated(0.37)	neutral(0.019)	superfamily_WD40_like
COL5A1	1289	genome.wustl.edu	37	9	137620555	137620555	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_000093.3	+1	reviewed	p.E276K	1.000	63	0%	28	46.4%	-	-	unknown(0)	tolerated(0.43)	-	NULL
PKD2L1	9033	genome.wustl.edu	37	10	102058326	102058326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_016112.2	-1	reviewed	p.G242C	1.000	62	0%	30	86.7%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PKD_channel
TRIM3	10612	genome.wustl.edu	37	11	6478950	6478950	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006458.2	-1	reviewed	p.R164H	0.998	18	0%	11	54.5%	-	-	possibly_damaging(0.631)	tolerated(0.12)	deleterious(0.481)	HMMSmart_SM00502
ANKK1	255239	genome.wustl.edu	37	11	113270437	113270437	+	Silent	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_178510.1	+1	reviewed	p.Y582	0.050	29	0%	15	33.3%	-	-	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
SIK3	23387	genome.wustl.edu	37	11	116734472	116734472	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_025164.3	-1	validated	p.R566Q	1.000	165	0%	43	27.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Protein kinase-like (PK-like)
SPA17	53340	genome.wustl.edu	37	11	124545166	124545166	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_017425.3	+1	reviewed	p.S2	1.000	119	0%	42	38.1%	-	-	-	-	-	NULL
KRAS	3845	genome.wustl.edu	37	12	25398282	25398282	+	Missense_Mutation	SNP	C	C	A	rs121913535	byCluster	TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_033360.2	-1	reviewed	p.G13C	1.000	225	0%	73	49.3%	-	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
DCLK1	9201	genome.wustl.edu	37	13	36348800	36348800	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	ENST00000360631	-1	known	p.R699*	1.000	88	1.1%	31	45.2%	-	-	-	-	-	NULL
KIAA0564	23078	genome.wustl.edu	37	13	42306285	42306285	+	Silent	SNP	G	G	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_015058.1	-1	validated	p.T811	0.793	130	0%	66	10.6%	-	-	-	-	-	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
MIR208B	100126336	genome.wustl.edu	37	14	23887231	23887231	+	RNA	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	ENST00000401172	-1	known	NULL	0.994	86	0%	20	40%	-	-	-	-	-	-
LGMN	5641	genome.wustl.edu	37	14	93176130	93176130	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001008530.1	-1	reviewed	p.D303Y	0.999	228	0%	55	40%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
HBA1	3039	genome.wustl.edu	37	16	226741	226741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_000558.3	+1	reviewed	p.T9N	0.000	164	0%	23	39.1%	-	-	benign(0)	tolerated(0.17)	neutral(0.059)	HMMPfam_Globin,superfamily_Globin-like
ABCC1	4363	genome.wustl.edu	37	16	16165501	16165501	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_004996.3	+1	reviewed	p.A609	0.485	159	0%	38	42.1%	-	-	-	-	-	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
BCL6B	255877	genome.wustl.edu	37	17	6928019	6928020	+	In_Frame_Ins	INS	-	-	CAG	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_181844.3	+1	validated	p.238in_frame_insS	0.939:0.528	-	-	-	-	-	-	-	-	-	NULL
MYH2	4620	genome.wustl.edu	37	17	10428310	10428310	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001100112.1	-1	reviewed	p.D1579H	1.000	470	0%	137	40.1%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_tail_1
ANKFN1	162282	genome.wustl.edu	37	17	54428292	54428292	+	Silent	SNP	A	A	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_153228.2	+1	validated	p.T121	0.715	99	0%	52	34.6%	-	-	-	-	-	NULL
SMAD2	4087	genome.wustl.edu	37	18	45394757	45394757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001003652.2	-1	reviewed	p.H198Y	0.999	192	0%	93	38.7%	-	-	benign(0.067)	tolerated(0.24)	neutral(0.042)	NULL
ZNF211	10520	genome.wustl.edu	37	19	58153185	58153185	+	Missense_Mutation	SNP	G	G	T	rs191091619	by1000genomes	TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_006385.3	+1	validated	p.R457L	0.898	192	0%	51	35.3%	-	-	benign(0.095)	tolerated(0.09)	neutral(0.303)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZMYND8	23613	genome.wustl.edu	37	20	45878087	45878087	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_183047.1	-1	reviewed	p.R573P	1.000	220	0%	58	36.2%	-	-	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	NULL
ENSG00000210082	0	genome.wustl.edu	37	MT	2991	2991	+	RNA	SNP	T	T	C	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	ENST00000387347	+1	known	NULL	NULL	2	0.000	16	0.938	-	-	-	-	-	-
SLC35A2	7355	genome.wustl.edu	37	X	48767196	48767196	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_005660.1	-1	provisional	p.A57T	0.960	87	0%	27	51.9%	-	-	benign(0.163)	tolerated(0.25)	neutral(0.051)	NULL
GLUD2	2747	genome.wustl.edu	37	X	120182341	120182341	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_012084.3	+1	reviewed	p.R268H	0.900	453	0%	107	43%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ELFV_dehydrog,superfamily_NAD(P)-bd
ATP2B3	492	genome.wustl.edu	37	X	152845747	152845747	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0TG-01A-32D-A10B-09	TCGA-BS-A0TG-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19def402-fb8d-4b27-90dd-ce9135a3c0a2	5db476db-5f81-4086-b212-b481497d82a2	NM_001001344.2	+1	reviewed	p.T1218	0.958	88	0%	24	50%	-	-	-	-	-	NULL
