Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
UBR4	23352	genome.wustl.edu	37	1	19411101	19411101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_020765.2	-1	validated	p.A4969T	1.000	58	0%	72	19.4%	-	-	benign(0)	tolerated(0.13)	neutral(0.253)	NULL
HIST2H3D	653604	genome.wustl.edu	37	1	149785071	149785071	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001123375.1	-1	provisional	p.Q56*	1.000	46	0%	85	10.6%	-	-	-	-	-	HMMSmart_SM00428,superfamily_Histone-fold
NTRK1	4914	genome.wustl.edu	37	1	156849143	156849143	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_002529.3	+1	reviewed	p.D679N	1.000	20	0%	20	20%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
RYR2	6262	genome.wustl.edu	37	1	237813313	237813313	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001035.2	+1	reviewed	p.H2550L	1.000	82	0%	73	20.5%	-	-	possibly_damaging(0.935)	-	-	NULL
AHCTF1	25909	genome.wustl.edu	37	1	247013191	247013191	+	Silent	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_015446.4	-1	validated	p.S2039	0.000	132	0%	148	35.1%	-	-	-	-	-	NULL
OR11L1	391189	genome.wustl.edu	37	1	248004555	248004555	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001001959.1	-1	provisional	p.L215R	0.002	58	0%	47	38.3%	-	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_7tm_1,superfamily_SSF81321
TSN	7247	genome.wustl.edu	37	2	122522843	122522843	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_004622.2	+1	reviewed	p.D196G	1.000	33	0%	30	26.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Translin,superfamily_Translin
DFNB59	494513	genome.wustl.edu	37	2	179325077	179325077	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001042702.3	+1	reviewed	p.L224V	1.000	41	0%	77	37.7%	-	-	benign(0)	tolerated(0.28)	neutral(0.032)	HMMPfam_Gasdermin
TTN	7273	genome.wustl.edu	37	2	179454237	179454237	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	ENST00000356127	-1	known	p.Y18169H	1.000	57	0%	73	11%	-	-	benign(0.049)	-	-	HMMPfam_fn3,HMMSmart_SM00060
PLCL1	5334	genome.wustl.edu	37	2	198948617	198948617	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_006226.3	+1	validated	p.P28T	0.995	60	0%	38	15.8%	-	-	benign(0.003)	tolerated(0.35)	neutral(0.021)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
RUFY4	285180	genome.wustl.edu	37	2	218954538	218954538	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	ENST00000374155	+1	known	p.H603fs	0.000	-	-	-	-	-	-	-	-	-	NULL
GIGYF2	26058	genome.wustl.edu	37	2	233712227	233712229	+	In_Frame_Del	DEL	ACA	ACA	-	rs58340018		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	ACA	ACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001103147.1	+1	reviewed	p.Q1235in_frame_del	0.057:0.094:0.124	-	-	-	-	-	-	-	-	-	NULL
SATB1	6304	genome.wustl.edu	37	3	18390802	18390802	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001131010.1	-1	validated	p.E718Q	0.998	80	0%	70	14.3%	-	-	benign(0.026)	deleterious(0.01)	neutral(0.407)	NULL
VPRBP	9730	genome.wustl.edu	37	3	51458180	51458180	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_014703.2	-1	validated	p.I695M	1.000	46	0%	51	13.7%	-	-	possibly_damaging(0.951)	deleterious(0)	deleterious(0.839)	superfamily_ARM repeat
IFT122	55764	genome.wustl.edu	37	3	129239079	129239079	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_052985.2	+1	reviewed	p.R1284C	1.000	41	0%	50	16%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PPM1L	151742	genome.wustl.edu	37	3	160783197	160783197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_139245.2	+1	provisional	p.T194K	0.993	59	0%	48	22.9%	-	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMSmart_SM00331,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C
RNF180	285671	genome.wustl.edu	37	5	63626180	63626181	+	Frame_Shift_Ins	INS	-	-	CT	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001113561.1	+1	validated	p.A511fs	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
BDP1	55814	genome.wustl.edu	37	5	70805343	70805343	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_018429.2	+1	reviewed	p.R808	0.628	36	0%	24	33.3%	-	-	-	-	-	NULL
DMXL1	1657	genome.wustl.edu	37	5	118552679	118552679	+	Silent	SNP	T	T	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_005509.4	+1	validated	p.N2649	1.000	92	0%	52	21.2%	-	-	-	-	-	superfamily_WD40 repeat-like
HIST1H3B	8358	genome.wustl.edu	37	6	26032031	26032031	+	Silent	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_003537.3	-1	reviewed	p.Q86	1.000	46	0%	37	27%	-	-	-	-	-	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold
IBTK	25998	genome.wustl.edu	37	6	82924048	82924048	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_015525.2	-1	reviewed	p.S700R	0.330	90	0%	100	30%	-	-	benign(0.246)	tolerated(0.45)	neutral(0.037)	HMMSmart_SM00225
MDN1	23195	genome.wustl.edu	37	6	90371820	90371820	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_014611.1	-1	provisional	p.E4851Q	1.000	191	0%	294	15.6%	-	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
METTL24	728464	genome.wustl.edu	37	6	110567215	110567215	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001123364.1	-1	inferred	p.L345F	1.000	87	0%	86	20.9%	-	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
POU6F2	11281	genome.wustl.edu	37	7	39504198	39504198	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_007252.3	+1	reviewed	p.K663	1.000	31	0%	27	22.2%	-	-	-	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
IQUB	154865	genome.wustl.edu	37	7	123143077	123143077	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_178827.4	-1	validated	p.V263A	0.927	68	0%	62	40.3%	-	-	benign(0.03)	tolerated(0.74)	neutral(0.003)	NULL
TMEM213	155006	genome.wustl.edu	37	7	138487764	138487764	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001085429.1	+1	validated	p.D92N	0.987	23	0%	40	15%	-	-	possibly_damaging(0.507)	deleterious(0)	deleterious(0.614)	NULL
CSMD1	64478	genome.wustl.edu	37	8	2813247	2813247	+	Silent	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_033225.5	-1	validated	p.V3287	0.995	55	0%	96	29.2%	-	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
LONRF1	91694	genome.wustl.edu	37	8	12580661	12580661	+	Silent	SNP	G	G	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_152271.3	-1	provisional	p.R756	0.998	44	0%	32	50%	-	-	-	-	-	HMMPfam_LON,HMMSmart_SM00464
TGFBR1	7046	genome.wustl.edu	37	9	101891138	101891138	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_004612.2	+1	reviewed	p.A33	0.884	28	0%	26	23.1%	-	-	-	-	-	superfamily_Snake toxin-like
ZDHHC12	84885	genome.wustl.edu	37	9	131484864	131484864	+	Silent	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	ENST00000406904	-1	known	p.P85	0.206	16	0%	24	45.8%	-	-	-	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61828434	61828434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_020987.2	-1	reviewed	p.E4069K	1.000	88	0%	103	13.6%	-	-	benign(0.004)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61832731	61832731	+	Silent	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_020987.2	-1	reviewed	p.L2636	0.023	35	0%	49	14.3%	-	-	-	-	-	NULL
ZNF365	22891	genome.wustl.edu	37	10	64136210	64136210	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_199451.2	+1	reviewed	p.Q86H	0.000	50	0%	50	34%	-	-	benign(0.075)	tolerated(0.13)	neutral(0.258)	NULL
FAM149B1	317662	genome.wustl.edu	37	10	74968500	74968500	+	Silent	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	ENST00000372955	+1	known	p.Q163R	0.042	59	0%	53	26.4%	-	-	-	-	-	NULL
CPEB3	22849	genome.wustl.edu	37	10	93870875	93870875	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_014912.4	-1	validated	p.K510N	1.000	40	0%	24	16.7%	-	-	probably_damaging(0.969)	tolerated(0.08)	deleterious(0.712)	HMMSmart_SM00360
GBF1	8729	genome.wustl.edu	37	10	104140884	104140884	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_004193.1	+1	provisional	p.D1724G	1.000	25	0%	26	15.4%	-	-	benign(0.01)	tolerated(0.37)	neutral(0.019)	NULL
GPAM	57678	genome.wustl.edu	37	10	113928680	113928680	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_020918.4	-1	validated	p.F275	1.000	53	0%	42	14.3%	-	-	-	-	-	HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF69593
GPAM	57678	genome.wustl.edu	37	10	113932005	113932005	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_020918.4	-1	validated	p.L243	1.000	59	0%	66	12.1%	-	-	-	-	-	HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF69593
GPAM	57678	genome.wustl.edu	37	10	113935425	113935425	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_020918.4	-1	validated	p.Q116*	1.000	65	0%	87	11.5%	-	-	-	-	-	NULL
GAS2	2620	genome.wustl.edu	37	11	22707273	22707273	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001143830.1	+1	reviewed	p.Q69E	1.000	61	0%	64	15.6%	-	-	benign(0.018)	deleterious(0.02)	neutral(0.384)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
RAG1	5896	genome.wustl.edu	37	11	36597771	36597771	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_000448.2	+1	reviewed	p.R973C	1.000	46	0%	47	31.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SPTBN2	6712	genome.wustl.edu	37	11	66453509	66453509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_006946.2	-1	reviewed	p.E2336K	1.000	9	0.000	10	0.800	-	-	benign(0.097)	tolerated(0.9)	neutral(0.007)	NULL
C2CD3	26005	genome.wustl.edu	37	11	73748713	73748713	+	Silent	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_015531.4	-1	validated	p.Q1897	0.780	41	0%	63	14.3%	-	-	-	-	-	NULL
AASDHPPT	60496	genome.wustl.edu	37	11	105961379	105961379	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_015423.2	+1	reviewed	p.Q169E	1.000	91	0%	91	34.1%	-	-	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	HMMPfam_ACPS,superfamily_4-PPT_transf
OR10G9	219870	genome.wustl.edu	37	11	123894588	123894588	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001001953.1	+1	provisional	p.R290I	1.000	71	0%	108	25%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF81321
C1S	716	genome.wustl.edu	37	12	7177397	7177397	+	Silent	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001734.3	+1	reviewed	p.L503	0.013	28	0%	30	20%	-	-	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
ABCC9	10060	genome.wustl.edu	37	12	21997468	21997468	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_005691.2	-1	reviewed	p.P1088	0.911	40	0%	39	23.1%	-	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
STAC3	246329	genome.wustl.edu	37	12	57642907	57642907	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_145064.1	-1	provisional	p.L84P	0.986	39	0%	53	34%	-	-	benign(0)	tolerated(0.1)	neutral(0.286)	superfamily_Cysteine-rich domain
ZFC3H1	196441	genome.wustl.edu	37	12	72028005	72028005	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_144982.4	-1	validated	p.D814H	1.000	107	0%	261	39.5%	-	-	probably_damaging(0.962)	deleterious(0.01)	deleterious(0.810)	NULL
LOC643677	643677	genome.wustl.edu	37	13	103385317	103385317	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	XM_002344085.1	-1	model	p.E5758D	0.000	66	0%	63	17.5%	-	-	unknown(0)	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103402017	103402017	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	XM_002344085.1	-1	model	p.E273K	0.015	46	0%	46	30.4%	-	-	-	-	-	NULL
EAPP	55837	genome.wustl.edu	37	14	34993960	34993960	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_018453.3	-1	reviewed	p.S175T	1.000	64	0%	60	46.7%	-	-	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_Eapp_C
RYR3	6263	genome.wustl.edu	37	15	33916136	33916136	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001036.3	+1	validated	p.R829H	1.000	44	0%	46	21.7%	-	-	benign(0.192)	-	-	NULL
SNX29	92017	genome.wustl.edu	37	16	12121198	12121198	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_032167.2	+1	validated	p.Q48H	1.000	51	0%	39	17.9%	-	-	probably_damaging(0.996)	tolerated(0.12)	deleterious(0.722)	HMMPfam_RUN
PRKCB	5579	genome.wustl.edu	37	16	24183642	24183642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_002738.6	+1	reviewed	p.H431Y	1.000	63	0%	72	25%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
LPCAT2	54947	genome.wustl.edu	37	16	55559537	55559537	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_017839.4	+1	reviewed	p.H97Y	0.303	69	0%	77	24.7%	-	-	benign(0.087)	deleterious(0.04)	neutral(0.355)	superfamily_Glycerol-3-phosphate (1)-acyltransferase
TP53	7157	genome.wustl.edu	37	17	7577559	7577559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_000546.4	-1	reviewed	p.S241F	1.000	51	0%	45	55.6%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53
COX10	1352	genome.wustl.edu	37	17	13980228	13980228	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001303.3	+1	reviewed	p.L118F	0.000	68	0%	40	22.5%	-	-	possibly_damaging(0.791)	tolerated(0.18)	neutral(0.352)	NULL
PGAP3	93210	genome.wustl.edu	37	17	37840943	37840943	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_033419.3	-1	validated	p.L113	0.999	20	0%	120	92.5%	-	-	-	-	-	HMMPfam_Per1
SMURF2	64750	genome.wustl.edu	37	17	62547721	62547721	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_022739.3	-1	validated	p.F617S	1.000	49	0%	66	24.2%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
C18orf34	374864	genome.wustl.edu	37	18	30825253	30825253	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001105528.1	-1	validated	p.D517H	0.110	133	0%	161	20.5%	-	-	possibly_damaging(0.926)	deleterious(0.01)	deleterious(0.780)	NULL
ASXL3	80816	genome.wustl.edu	37	18	31324893	31324893	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_030632.1	+1	provisional	p.P1694L	0.046	36	0%	33	72.7%	-	-	benign(0.395)	deleterious(0)	deleterious(0.572)	NULL
CDH19	28513	genome.wustl.edu	37	18	64239332	64239332	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_021153.2	-1	reviewed	p.S37F	0.006	96	0%	81	13.6%	-	-	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
PDE4A	5141	genome.wustl.edu	37	19	10577915	10577915	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001111307.1	+1	validated	p.S760L	0.000	44	0%	51	15.7%	-	-	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
JAK3	3718	genome.wustl.edu	37	19	17941385	17941385	+	Nonsense_Mutation	SNP	G	G	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_000215.3	-1	reviewed	p.S1008*	0.984	19	0%	42	16.7%	-	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
FOXA2	3170	genome.wustl.edu	37	20	22563211	22563211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_021784.4	-1	reviewed	p.F223L	1.000	31	0%	29	51.7%	-	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
FOXA2	3170	genome.wustl.edu	37	20	22563212	22563212	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_021784.4	-1	reviewed	p.F223Y	1.000	32	0%	28	53.6%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
RBPJL	11317	genome.wustl.edu	37	20	43940952	43940952	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_014276.2	+1	reviewed	p.E180fs	1.000	-	-	-	-	-	-	-	-	-	superfamily_P53_like_DNA_bnd,HMMPfam_LAG1-DNAbind
CTSZ	1522	genome.wustl.edu	37	20	57571799	57571799	+	Silent	SNP	T	T	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001336.3	-1	reviewed	p.E232	0.851	45	0%	33	21.2%	-	-	-	-	-	HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases
DIP2A	23181	genome.wustl.edu	37	21	47974506	47974506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_015151.3	+1	reviewed	p.A1058V	0.981	41	0%	39	51.3%	-	-	possibly_damaging(0.818)	deleterious(0)	deleterious(0.754)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
CLTCL1	8218	genome.wustl.edu	37	22	19213795	19213795	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_007098.3	-1	reviewed	p.D632N	1.000	67	0%	110	12.7%	-	-	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat
ZDHHC8	29801	genome.wustl.edu	37	22	20130885	20130885	+	Missense_Mutation	SNP	G	G	A	rs145467798	by1000genomes	TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_013373.3	+1	reviewed	p.V578I	0.997	10	0%	23	26.1%	-	-	possibly_damaging(0.865)	tolerated(0.42)	neutral(0.349)	NULL
TTC28	23331	genome.wustl.edu	37	22	28378362	28378362	+	Silent	SNP	G	G	A	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_001145418.1	-1	validated	p.N2431	0.958	29	3.4%	54	18.5%	-	-	-	-	-	NULL
EFNB1	1947	genome.wustl.edu	37	X	68060356	68060356	+	Silent	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_004429.4	+1	reviewed	p.S300	0.983	28	0%	23	21.7%	-	-	-	-	-	NULL
ODZ1	10178	genome.wustl.edu	37	X	123554349	123554349	+	Silent	SNP	A	A	C	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_014253.3	-1	reviewed	p.R1591	0.728	49	0%	43	14%	-	-	-	-	-	HMMPfam_RHS_repeat,superfamily_N2O_reductase_N
ZNF280C	55609	genome.wustl.edu	37	X	129370209	129370209	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_017666.4	-1	validated	p.D250E	1.000	44	0%	62	12.9%	-	-	benign(0.018)	tolerated(0.9)	neutral(0.001)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ATP11C	286410	genome.wustl.edu	37	X	138820120	138820120	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_173694.4	-1	validated	p.E1084D	1.000	46	0%	39	12.8%	-	-	benign(0.038)	tolerated(1)	neutral(0.002)	NULL
ATP11C	286410	genome.wustl.edu	37	X	138884420	138884420	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_173694.4	-1	validated	p.E215K	1.000	132	0%	143	14%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Calcium ATPase transduction domain A
MAMLD1	10046	genome.wustl.edu	37	X	149639325	149639327	+	In_Frame_Del	DEL	CAG	CAG	-	novel		TCGA-FI-A2F8-01A-12D-A17D-09	TCGA-FI-A2F8-10B-01D-A17D-09	CAG	CAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5eea6de-5e8e-41ca-930f-e7e48c855c36	6b354f12-59dd-455e-b313-1d655b72a30c	NM_005491.3	+1	reviewed	p.Q497in_frame_del	0.006:0.000:0.000	-	-	-	-	-	-	-	-	-	NULL
