Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	validation_method	t_ref_count	validation_status	validation_tumor_sample	t_alt_count	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
AGTPBP1	23287	broad.mit.edu	37	9	88201776	88201776	+	Missense_Mutation	SNP	T	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr9:88201776T>A	uc011lte.2	-	20	3106	c.3039A>T	c.(3037-3039)caA>caT	p.Q1013H	AGTPBP1_uc004aod.4_Missense_Mutation_p.Q627H|AGTPBP1_uc011ltc.2_Intron|AGTPBP1_uc011ltd.2_Missense_Mutation_p.Q1001H|AGTPBP1_uc010mqc.3_Missense_Mutation_p.Q961H	NM_015239	NP_056054	Q9UPW5	CBPC1_HUMAN	Homo sapiens ATP/GTP binding protein 1 (AGTPBP1), mRNA.	1001					C-terminal protein deglutamylation|cerebellar Purkinje cell differentiation|eye photoreceptor cell differentiation|mitochondrion organization|neuromuscular process|olfactory bulb development|protein side chain deglutamylation|proteolysis	cytosol|mitochondrion|nucleus	metallocarboxypeptidase activity|tubulin binding|zinc ion binding			NS(1)|breast(2)|cervix(1)|endometrium(3)|kidney(3)|large_intestine(12)|lung(12)|ovary(5)|skin(2)|urinary_tract(3)	44						CAGCCAAGTATTGCAACAGCC	0.388000														60			34		0	0	0.183431	0	0
ZNF492	57615	broad.mit.edu	37	19	22817127	22817127	+	Splice_Site	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:22817127T>G	uc002nqw.3	+	1	1	c.-243_splice	c.e1-1			NM_020855	NP_065906	Q9P255	ZN492_HUMAN	Homo sapiens zinc finger protein 492 (ZNF492), mRNA.						regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			endometrium(1)|kidney(1)|large_intestine(6)|lung(10)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	21		all_cancers(12;0.0266)|all_lung(12;0.00187)|Lung NSC(12;0.0019)|all_epithelial(12;0.00203)|Hepatocellular(1079;0.244)				TGTGGCGGGGTCTTTGTCTCT	0.597000														1			2		0	0	0.175082	0	0
ZFP112	7771	broad.mit.edu	37	19	44896570	44896570	+	Missense_Mutation	SNP	C	G	G	rs144077949	byFrequency	TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:44896570C>G	uc010xxa.2	-	2	140	c.97G>C	c.(97-99)Gat>Cat	p.D33H	ZFP112_uc010xwz.2_Intron|ZFP112_uc002ozd.4_Missense_Mutation_p.D26H	NM_152354	NP_689567	Q9UJU3	ZF112_HUMAN	Homo sapiens zinc finger protein 285 (ZNF285), mRNA.	26	KRAB.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(1)|central_nervous_system(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(9)|liver(1)|lung(8)|ovary(3)|prostate(4)|skin(3)	41						TGGGCTTTATCCAATAGTGCC	0.453000														38			33		0	0	0.144211	0	0
HAAO	23498	broad.mit.edu	37	2	42994588	42994588	+	Missense_Mutation	SNP	G	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:42994588G>C	uc002rst.4	-	9	925	c.850C>G	c.(850-852)Ccc>Gcc	p.P284A		NM_012205	NP_036337	P46952	3HAO_HUMAN	Homo sapiens 3-hydroxyanthranilate 3,4-dioxygenase (HAAO), mRNA.	284	Domain B (By similarity).				neuron homeostasis|pyridine nucleotide biosynthetic process|quinolinate biosynthetic process|response to cadmium ion|response to zinc ion|tryptophan catabolic process	cytosol|soluble fraction	3-hydroxyanthranilate 3,4-dioxygenase activity|electron carrier activity|ferrous iron binding			breast(2)|cervix(1)|large_intestine(2)|lung(2)|ovary(1)|prostate(1)|urinary_tract(2)	11						CACCCCAGGGGCTTCTTGCAG	0.617000														42			6		0	0	0.047766	0	0
SEPT7	989	broad.mit.edu	37	7	35912377	35912377	+	Splice_Site	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr7:35912377G>A	uc010kxc.3	+	4	595	c.371_splice	c.e4+1	p.C124_splice	SEPT7_uc011kat.2_Splice_Site_p.C124_splice|SEPT7_uc011kau.2_Splice_Site_p.C90_splice|SEPT7_uc011kav.2_Splice_Site_p.C73_splice	NM_001788	NP_001779	Q16181	SEPT7_HUMAN	Homo sapiens septin 7 (SEPT7), transcript variant 1, mRNA.	126					cilium morphogenesis|cytokinesis|mitosis|protein heterooligomerization|regulation of embryonic cell shape	cilium axoneme|cleavage furrow|condensed chromosome kinetochore|midbody|nucleus|septin complex|spindle|stress fiber	GTP binding|protein binding|structural molecule activity			central_nervous_system(1)|endometrium(1)|kidney(2)|large_intestine(2)|lung(7)|prostate(1)	14						ATAGTAATTGGTAAGAAGGGT	0.388000														19			12		0	0	0.093190	0	0
ACAD10	80724	broad.mit.edu	37	12	112184083	112184083	+	Missense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr12:112184083C>A	uc009zvx.3	+	14	2544	c.2344C>A	c.(2344-2346)Ccc>Acc	p.P782T	ACAD10_uc001tsp.3_Missense_Mutation_p.P751T|ACAD10_uc001tsq.3_Missense_Mutation_p.P751T|ACAD10_uc001tss.1_Non-coding_Transcript	NM_001136538	NP_001130010	Q6JQN1	ACD10_HUMAN	Homo sapiens acyl-CoA dehydrogenase family, member 10 (ACAD10), transcript variant 1, mRNA.	751							acyl-CoA dehydrogenase activity|flavin adenine dinucleotide binding|hydrolase activity|transferase activity, transferring phosphorus-containing groups			NS(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(5)|liver(1)|lung(17)|ovary(4)|prostate(1)|skin(4)|upper_aerodigestive_tract(1)|urinary_tract(5)	47						CCTGTATGCCCCCGAGGTACC	0.473000														212			75		3.76054e-38	4.59078e-38	0.139131	1	0
PIK3C2G	5288	broad.mit.edu	37	12	18658292	18658292	+	Missense_Mutation	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr12:18658292G>A	uc001rdt.3	+	22	3213	c.3097G>A	c.(3097-3099)Gac>Aac	p.D1033N	PIK3C2G_uc010sia.2_Non-coding_Transcript|PIK3C2G_uc010sib.2_Missense_Mutation_p.D1074N|PIK3C2G_uc010sic.2_Missense_Mutation_p.D852N	NM_004570	NP_004561	O75747	P3C2G_HUMAN	Homo sapiens phosphoinositide-3-kinase, class 2, gamma polypeptide (PIK3C2G), mRNA.	1033	PI3K/PI4K.				cell communication|phosphatidylinositol-mediated signaling	membrane|phosphatidylinositol 3-kinase complex	1-phosphatidylinositol-3-kinase activity|ATP binding|phosphatidylinositol binding|phosphatidylinositol-4-phosphate 3-kinase activity			breast(5)|central_nervous_system(6)|endometrium(2)|kidney(4)|large_intestine(8)|lung(31)|ovary(2)|prostate(1)|skin(2)|stomach(4)|upper_aerodigestive_tract(1)	66		Hepatocellular(102;0.194)				GGGAGTATGTGACCGTCACAA	0.393000														4			6		0	0	0.029380	0	0
RNF219	79596	broad.mit.edu	37	13	79190506	79190506	+	Missense_Mutation	SNP	T	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr13:79190506T>A	uc001vkw.1	-	5	1449	c.1390A>T	c.(1390-1392)Aca>Tca	p.T464S	BX647243_uc001vku.1_Non-coding_Transcript|RNF219_uc010afb.1_Missense_Mutation_p.T274S	NM_024546	NP_078822	Q5W0B1	RN219_HUMAN	Homo sapiens ring finger protein 219 (RNF219), mRNA.	464	Ser-rich.						zinc ion binding			breast(1)|cervix(1)|endometrium(2)|kidney(3)|large_intestine(11)|liver(1)|lung(11)|prostate(1)|skin(1)	32		Acute lymphoblastic leukemia(28;0.0279)|Breast(118;0.0848)		GBM - Glioblastoma multiforme(99;0.0414)		CAAAATCCTGTCTTTGGGGAA	0.333000														33			22		0	0	0.076483	0	0
ACOX3	8310	broad.mit.edu	37	4	8417674	8417674	+	Missense_Mutation	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:8417674C>T	uc010idk.3	-	2	342	c.197G>A	c.(196-198)gGa>gAa	p.G66E	ACOX3_uc003glc.4_Missense_Mutation_p.G66E|ACOX3_uc003gld.4_Missense_Mutation_p.G66E	NM_003501	NP_003492	O15254	ACOX3_HUMAN	Homo sapiens acyl-CoA oxidase 3, pristanoyl (ACOX3), transcript variant 1, mRNA.	66					bile acid metabolic process|fatty acid beta-oxidation using acyl-CoA oxidase	peroxisomal matrix	acyl-CoA dehydrogenase activity|flavin adenine dinucleotide binding|pristanoyl-CoA oxidase activity			breast(2)|central_nervous_system(1)|endometrium(4)|kidney(4)|large_intestine(9)|lung(17)|prostate(1)|skin(3)|stomach(1)	42						CAGATCGGCTCCAGGGGAACG	0.483000														103			61		0	0	0.139131	0	0
SLC16A6	9120	broad.mit.edu	37	17	66270212	66270212	+	Splice_Site	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr17:66270212C>A	uc002jha.2	-	4	546	c.233_splice	c.e4-1	p.A78_splice	ARSG_uc002jhc.2_Intron|SLC16A6_uc002jgz.2_Splice_Site_p.A78_splice	NM_001174166	NP_004685	O15403	MOT7_HUMAN	Homo sapiens solute carrier family 16, member 6 (monocarboxylic acid transporter 7) (SLC16A6), transcript variant 1, mRNA.	78						integral to plasma membrane|membrane fraction	monocarboxylic acid transmembrane transporter activity|symporter activity			large_intestine(3)|lung(8)|prostate(1)|skin(1)|urinary_tract(2)	15	all_cancers(12;1.24e-09)		BRCA - Breast invasive adenocarcinoma(8;3.17e-08)|LUSC - Lung squamous cell carcinoma(166;0.24)		Pyruvic acid(DB00119)	GCGAGGGGAGCTGCCGGGAAA	0.547000														46			35		1.59361e-14	1.78332e-14	0.092188	1	0
SLC26A1	10861	broad.mit.edu	37	4	985220	985220	+	Missense_Mutation	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:985220G>A	uc003gcb.3	-	2	650	c.272C>T	c.(271-273)tCa>tTa	p.S91L	SLC26A1_uc003gbx.3_Missense_Mutation_p.S91L|IDUA_uc003gby.3_Intron|IDUA_uc003gbz.3_Intron|IDUA_uc003gca.3_Intron|SLC26A1_uc003gcc.3_Missense_Mutation_p.S91L	NM_213613	NP_998778	Q9H2B4	S26A1_HUMAN	Homo sapiens solute carrier family 26 (sulfate transporter), member 1 (SLC26A1), transcript variant 3, mRNA.	91						integral to membrane|plasma membrane	secondary active sulfate transmembrane transporter activity			central_nervous_system(1)|endometrium(4)|pancreas(1)|prostate(1)|skin(1)	8			OV - Ovarian serous cystadenocarcinoma(23;0.0158)			GGCCAGCAATGAGTAGGCGAT	0.632000														110			49		0	0	0.139131	0	0
MCOLN3	55283	broad.mit.edu	37	1	85487988	85487988	+	Missense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:85487988C>A	uc001dkp.3	-	9	1338	c.1191G>T	c.(1189-1191)aaG>aaT	p.K397N	MCOLN3_uc001dko.3_Missense_Mutation_p.K16N|MCOLN3_uc001dkq.3_Missense_Mutation_p.K341N	NM_018298	NP_060768	Q8TDD5	MCLN3_HUMAN	Homo sapiens mucolipin 3 (MCOLN3), transcript variant 1, mRNA.	397						integral to membrane	ion channel activity			endometrium(6)|kidney(3)|large_intestine(9)|lung(12)|prostate(3)|skin(1)	34				all cancers(265;0.00957)|Epithelial(280;0.0254)		TTACGTTGTACTTTGCAAAGA	0.433000														33			18		3.52763e-06	3.72581e-06	0.160694	1	0
ATP7B	540	broad.mit.edu	37	13	52548108	52548108	+	Silent	SNP	A	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr13:52548108A>T	uc001vfw.2	-	1	1405	c.1248T>A	c.(1246-1248)gcT>gcA	p.A416A	ATP7B_uc001vfy.2_Silent_p.A305A|ATP7B_uc010adv.2_Silent_p.A416A|ATP7B_uc001vfx.2_Silent_p.A416A|ATP7B_uc010tgt.1_Silent_p.A416A|ATP7B_uc010tgu.1_Silent_p.A416A|ATP7B_uc010tgv.1_Silent_p.A416A|ATP7B_uc010tgw.1_Silent_p.A384A	NM_000053	NP_000044	P35670	ATP7B_HUMAN	Homo sapiens ATPase, Cu++ transporting, beta polypeptide (ATP7B), transcript variant 1, mRNA.	416	HMA 4.				ATP biosynthetic process|cellular copper ion homeostasis|copper ion import|response to copper ion|sequestering of calcium ion	Golgi membrane|integral to plasma membrane|late endosome|mitochondrion	ATP binding|copper ion binding|copper-exporting ATPase activity|protein binding	p.A416V(1)		NS(1)|breast(4)|central_nervous_system(1)|endometrium(5)|kidney(4)|large_intestine(7)|lung(23)|ovary(1)|prostate(3)|skin(4)|stomach(2)	55		Breast(56;0.000207)|Lung NSC(96;0.000845)|Prostate(109;0.0235)|Hepatocellular(98;0.065)|all_neural(104;0.19)		GBM - Glioblastoma multiforme(99;5.25e-08)		TGTCTTCTATAGCAGCTCTGA	0.458000									Wilson disease					128			73		0	0	0.139131	0	0
QSER1	79832	broad.mit.edu	37	11	32954930	32954930	+	Nonsense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr11:32954930C>A	uc001mty.3	+	3	2006	c.1739C>A	c.(1738-1740)tCa>tAa	p.S580*	QSER1_uc001mtz.1_Nonsense_Mutation_p.S341*|QSER1_uc001mua.3_Nonsense_Mutation_p.S85*	NM_001076786	NP_001070254	Q2KHR3	QSER1_HUMAN	Homo sapiens glutamine and serine rich 1 (QSER1), mRNA.	580										breast(5)|central_nervous_system(2)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(7)|lung(16)|ovary(4)|prostate(1)|skin(5)|stomach(1)|urinary_tract(1)	48	Breast(20;0.158)					TCTCTTGAGTCATCAACCCAA	0.398000														28			12		4.3838e-07	4.6827e-07	0.105934	1	0
OR11A1	26531	broad.mit.edu	37	6	29395381	29395381	+	Missense_Mutation	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr6:29395381T>G	uc003nmg.3	-	0	129	c.38A>C	c.(37-39)gAa>gCa	p.E13A		NM_013937	NP_039225	Q9GZK7	O11A1_HUMAN	Homo sapiens olfactory receptor, family 11, subfamily A, member 1 (OR11A1), mRNA.	13					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			cervix(1)|large_intestine(1)|lung(12)|ovary(1)|pancreas(1)|prostate(2)|upper_aerodigestive_tract(1)	19						GAGGACAAATTCAGTAATAGT	0.398000														58			31		0	0	0.153744	0	0
DOT1L	84444	broad.mit.edu	37	19	2216711	2216711	+	Silent	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:2216711G>A	uc002lvc.1	+	5	1004	c.237G>A	c.(235-237)ctG>ctA	p.L79L	DOT1L_uc002lvb.4_Silent_p.L785L|AX746733_uc002lvd.1_5'Flank|DOT1L_uc002lve.1_Silent_p.L79L	NM_032482	NP_115871	Q8TEK3	DOT1L_HUMAN	Homo sapiens DOT1-like, histone H3 methyltransferase (S. cerevisiae) (DOT1L), mRNA.	785						nucleus	DNA binding|histone-lysine N-methyltransferase activity|protein binding			NS(1)|breast(1)|cervix(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(3)|lung(14)|ovary(2)|pancreas(2)|prostate(1)|upper_aerodigestive_tract(2)|urinary_tract(9)	42		Hepatocellular(1079;0.137)		UCEC - Uterine corpus endometrioid carcinoma (162;6.64e-05)|OV - Ovarian serous cystadenocarcinoma(105;1.09e-113)|Epithelial(107;3.79e-112)|all cancers(105;1.67e-104)|BRCA - Breast invasive adenocarcinoma(158;0.00136)|STAD - Stomach adenocarcinoma(1328;0.18)		GGCGGCACCTGAGCCAGGACC	0.692000														45			30		0	0	0.193644	0	0
PIGR	5284	broad.mit.edu	37	1	207105906	207105906	+	Nonsense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:207105906C>A	uc001hez.3	-	7	2087	c.1903G>T	c.(1903-1905)Gga>Tga	p.G635*	PIGR_uc009xbz.3_Nonsense_Mutation_p.G635*	NM_002644	NP_002635	P01833	PIGR_HUMAN	Homo sapiens polymeric immunoglobulin receptor (PIGR), mRNA.	635						extracellular region|integral to plasma membrane	protein binding			central_nervous_system(2)|endometrium(5)|kidney(3)|large_intestine(7)|lung(15)|ovary(1)|pancreas(1)|prostate(1)|skin(4)|stomach(3)|upper_aerodigestive_tract(2)|urinary_tract(1)	45						CTGGAGCTTCCACCTTGTTCC	0.617000														84			59		9.79885e-19	1.12328e-18	0.139131	1	0
GPR125	166647	broad.mit.edu	37	4	22390249	22390249	+	Missense_Mutation	SNP	C	G	G	rs76872619		TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:22390249C>G	uc003gqm.1	-	18	3310	c.3045G>C	c.(3043-3045)ttG>ttC	p.L1015F	GPR125_uc010ieo.1_Missense_Mutation_p.L871F|GPR125_uc003gql.1_Missense_Mutation_p.L142F	NM_145290	NP_660333	Q8IWK6	GP125_HUMAN	Homo sapiens G protein-coupled receptor 125 (GPR125), mRNA.	1015					neuropeptide signaling pathway	integral to membrane	G-protein coupled receptor activity			breast(1)|endometrium(6)|kidney(2)|large_intestine(10)|lung(33)|pancreas(1)|skin(1)|stomach(1)|urinary_tract(1)	56		Breast(46;0.198)				AAGAAACAGCCAAAGCCCCAA	0.443000														81			55		0	0	0.139131	0	0
PRKRIP1	79706	broad.mit.edu	37	7	102040095	102040095	+	Splice_Site	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr7:102040095G>A	uc011kkr.1	+	3	361	c.306_splice	c.e3+1	p.K102_splice	PRKRIP1_uc011kkq.1_Splice_Site_p.K45_splice|PRKRIP1_uc003uzh.2_Splice_Site_p.K102_splice			Q9H875	PKRI1_HUMAN	Homo sapiens PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), mRNA.	102	Required for RNA-binding (By similarity).					nucleolus				endometrium(1)|lung(4)|ovary(1)	6						TGGCTGAGAAGGTCAGTGAGC	0.552000														196			132		0	0	0.139131	0	0
CASP14	23581	broad.mit.edu	37	19	15164633	15164633	+	Silent	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:15164633C>T	uc010dzv.2	+	3	479	c.267C>T	c.(265-267)caC>caT	p.H89H		NM_012114	NP_036246	P31944	CASPE_HUMAN	Homo sapiens caspase 14, apoptosis-related cysteine peptidase (CASP14), mRNA.	89					apoptosis|cell differentiation|epidermis development|proteolysis	cytoplasm|nucleus	cysteine-type endopeptidase activity			NS(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(9)|lung(8)|ovary(1)|prostate(1)|skin(3)	26						TCATGGCTCACGGGAGGGAAG	0.552000														180			32		0	0	0.153744	0	0
ASB5	140458	broad.mit.edu	37	4	177136796	177136796	+	Silent	SNP	T	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:177136796T>C	uc003iuq.2	-	6	1059	c.945A>G	c.(943-945)caA>caG	p.Q315Q	ASB5_uc003iup.2_Silent_p.Q262Q	NM_080874	NP_543150	Q8WWX0	ASB5_HUMAN	Homo sapiens ankyrin repeat and SOCS box containing 5 (ASB5), mRNA.	315	SOCS box.				intracellular signal transduction			p.Q315E(1)		endometrium(2)|kidney(1)|large_intestine(9)|lung(18)|prostate(2)|skin(2)	34		Breast(14;0.00015)|Melanoma(52;0.00886)|Prostate(90;0.00996)|Renal(120;0.0183)|all_hematologic(60;0.107)|all_neural(102;0.164)		all cancers(43;2.13e-20)|Epithelial(43;9.94e-18)|OV - Ovarian serous cystadenocarcinoma(60;2e-09)|GBM - Glioblastoma multiforme(59;0.000254)|STAD - Stomach adenocarcinoma(60;0.000653)|LUSC - Lung squamous cell carcinoma(193;0.0393)		GCAGCTGGAGTTGTGGGATAA	0.368000														31			14		0	0	0.119110	0	0
ZNF136	7695	broad.mit.edu	37	19	12297631	12297631	+	Missense_Mutation	SNP	G	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:12297631G>T	uc002mti.3	+	3	585	c.438G>T	c.(436-438)tgG>tgT	p.W146C	ZNF136_uc010xmh.2_Missense_Mutation_p.W80C	NM_003437	NP_003428	P52737	ZN136_HUMAN	Homo sapiens zinc finger protein 136 (ZNF136), mRNA.	146					negative regulation of transcription from RNA polymerase II promoter|transcription from RNA polymerase II promoter	nucleus	DNA binding|protein binding|transcription corepressor activity|zinc ion binding			NS(1)|biliary_tract(1)|kidney(3)|large_intestine(2)|lung(6)|ovary(1)|pancreas(1)|skin(1)|upper_aerodigestive_tract(2)	18						ACCAGTGTTGGAAACCCTTCA	0.408000														7			5		0.000602214	0.000622068	0.184627	1	0
NWD1	284434	broad.mit.edu	37	19	16918705	16918705	+	Missense_Mutation	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:16918705G>A	uc002neu.4	+	17	4467	c.4045G>A	c.(4045-4047)Gag>Aag	p.E1349K	NWD1_uc002net.4_Missense_Mutation_p.E1214K|NWD1_uc002nev.4_Missense_Mutation_p.E1143K|NWD1_uc021uqg.1_Missense_Mutation_p.E1214K	NM_001007525	NP_001007526	Q149M9	NWD1_HUMAN	Homo sapiens NACHT and WD repeat domain containing 1 (NWD1), mRNA.	1349							ATP binding			NS(3)|breast(2)|cervix(1)|endometrium(8)|large_intestine(17)|lung(18)|ovary(2)|pancreas(3)|prostate(5)|skin(5)|upper_aerodigestive_tract(2)|urinary_tract(1)	67						TCAGCTGCCCGAGACCCTCTC	0.567000														199			129		0	0	0.139131	0	0
HADHA	3030	broad.mit.edu	37	2	26459821	26459821	+	Missense_Mutation	SNP	G	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:26459821G>C	uc002rgy.3	-	3	346	c.216C>G	c.(214-216)ttC>ttG	p.F72L	HADHA_uc010yks.2_Intron|HADHA_uc010ykt.1_Intron	NM_000182	NP_000173	P40939	ECHA_HUMAN	Homo sapiens hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit (HADHA), nuclear gene encoding mitochondrial protein, mRNA.	72					fatty acid beta-oxidation	fatty acid beta-oxidation multienzyme complex|mitochondrial nucleoid|nucleolus	3-hydroxyacyl-CoA dehydrogenase activity|acetyl-CoA C-acetyltransferase activity|coenzyme binding|enoyl-CoA hydratase activity|long-chain-3-hydroxyacyl-CoA dehydrogenase activity|protein binding			autonomic_ganglia(1)|breast(1)|endometrium(5)|kidney(1)|large_intestine(6)|lung(10)|ovary(1)|prostate(4)|skin(1)	30	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)				NADH(DB00157)	TAACTTCTGAGAACTCTGAAT	0.403000														147			75		0	0	0.139131	0	0
RGS14	10636	broad.mit.edu	37	5	176797996	176797996	+	Missense_Mutation	SNP	G	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr5:176797996G>T	uc003mgh.3	+	10	1403	c.1221G>T	c.(1219-1221)aaG>aaT	p.K407N	RGS14_uc003mgf.3_Missense_Mutation_p.K406N|RGS14_uc003mgi.3_Missense_Mutation_p.K177N	NM_006480	NP_006471	O43566	RGS14_HUMAN	Homo sapiens regulator of G-protein signaling 14 (RGS14), mRNA.	406	Necessary for interaction with RABGEF1 (By similarity).|RBD 2.			H -> R (in Ref. 4; BAC85600).	chromosome segregation|long-term memory|long-term synaptic potentiation|negative regulation of ERK1 and ERK2 cascade|negative regulation of MAP kinase activity|negative regulation of synaptic plasticity|nucleocytoplasmic transport|platelet-derived growth factor receptor signaling pathway|positive regulation of neurogenesis|regulation of DNA-dependent transcription in response to stress|regulation of G-protein coupled receptor protein signaling pathway|response to oxidative stress|spindle organization|visual learning|zygote asymmetric cell division	PML body|cell junction|centrosome|dendritic spine|microtubule|postsynaptic density|postsynaptic membrane|spindle pole	GDP-dissociation inhibitor activity|GTPase activator activity|microtubule binding|receptor signaling complex scaffold activity|receptor signaling protein activity			breast(1)|central_nervous_system(1)|endometrium(1)|large_intestine(2)|lung(3)|skin(3)|upper_aerodigestive_tract(1)	12	all_cancers(89;2.04e-05)|Renal(175;0.000269)|Lung NSC(126;0.000832)|all_lung(126;0.00152)	all_neural(177;0.00409)|Medulloblastoma(196;0.00498)|all_hematologic(541;0.21)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)			TTCTGGAGAAGCACGGCTTGA	0.751000														22			12		1.5842e-08	1.71166e-08	0.105934	1	0
TANC2	26115	broad.mit.edu	37	17	61466867	61466867	+	Missense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr17:61466867C>A	uc002jal.4	+	14	2814	c.2791C>A	c.(2791-2793)Ctg>Atg	p.L931M	TANC2_uc010wpe.2_Missense_Mutation_p.L841M|TANC2_uc002jan.1_Missense_Mutation_p.L82M|TANC2_uc002jao.4_Missense_Mutation_p.L32M|TANC2_uc002jam.1_Missense_Mutation_p.L298M	NM_025185	NP_079461	Q9HCD6	TANC2_HUMAN	Homo sapiens tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 (TANC2), mRNA.	931							binding			breast(1)|central_nervous_system(1)|cervix(1)|endometrium(12)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(7)|lung(15)|ovary(2)|upper_aerodigestive_tract(3)	44						AGCAGGGTACCTGAGCATTGT	0.537000														25			24		1.55469e-16	1.76074e-16	0.083992	1	0
CROCCP2	84809	broad.mit.edu	37	1	16946437	16946437	+	RNA	SNP	C	T	T	rs2262202		TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:16946437C>T	uc010ocf.2	-	2		c.461G>A			CROCCP2_uc009vov.2_Non-coding_Transcript|CROCCP2_uc001aze.3_Non-coding_Transcript|CROCCP2_uc001azf.3_Non-coding_Transcript					Homo sapiens ciliary rootlet coiled-coil, rootletin pseudogene 2 (CROCCP2), non-coding RNA.																		AGCCTTCCGCCGGGCCAGCAG	0.672000														44			7		0	0	0.029380	0	0
TRNT1	51095	broad.mit.edu	37	3	3189651	3189651	+	Missense_Mutation	SNP	G	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr3:3189651G>C	uc003bpp.4	+	7	1220	c.1118G>C	c.(1117-1119)tGt>tCt	p.C373S	TRNT1_uc010hbv.3_Missense_Mutation_p.C353S|TRNT1_uc003bpm.2_Non-coding_Transcript	NM_182916	NP_886552	Q96Q11	TRNT1_HUMAN	Homo sapiens tRNA nucleotidyl transferase, CCA-adding, 1 (TRNT1), nuclear gene encoding mitochondrial protein, mRNA.	373					protein targeting to mitochondrion|tRNA 3'-end processing	mitochondrion	ATP binding|tRNA adenylyltransferase activity|tRNA binding			breast(2)|endometrium(3)|large_intestine(4)|lung(2)|urinary_tract(1)	12				Epithelial(13;0.00226)|OV - Ovarian serous cystadenocarcinoma(96;0.00592)|all cancers(10;0.011)		GGAGAGCACTGTCTCCTAAAG	0.438000														11			6		0	0	0.038147	0	0
RBM34	23029	broad.mit.edu	37	1	235318245	235318245	+	Missense_Mutation	SNP	T	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:235318245T>A	uc001hwn.3	-	3	779	c.548A>T	c.(547-549)aAt>aTt	p.N183I	RBM34_uc001hwo.3_Non-coding_Transcript|RBM34_uc001hwp.3_Non-coding_Transcript|RBM34_uc010pxp.1_Missense_Mutation_p.N183I	NM_015014	NP_055829	P42696	RBM34_HUMAN	Homo sapiens RNA binding motif protein 34 (RBM34), transcript variant 1, mRNA.	183						nucleolus	RNA binding|nucleotide binding			central_nervous_system(1)	1	Ovarian(103;0.0398)	all_cancers(173;0.177)|Prostate(94;0.0166)	OV - Ovarian serous cystadenocarcinoma(106;5.43e-05)|Epithelial(3;0.000121)			AGTTCTCTCATTCTTTAATCT	0.328000														146			75		0	0	0.139131	0	0
PDZRN4	29951	broad.mit.edu	37	12	41585335	41585335	+	Nonsense_Mutation	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr12:41585335C>T	uc010skn.2	+	1	732	c.724C>T	c.(724-726)Cga>Tga	p.R242*		NM_001164595	NP_001158067	Q6ZMN7	PZRN4_HUMAN	Homo sapiens PDZ domain containing ring finger 4 (PDZRN4), transcript variant 1, mRNA.	242	PDZ 1.						ubiquitin-protein ligase activity|zinc ion binding			breast(3)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(23)|lung(29)|ovary(3)|pancreas(1)|prostate(2)|skin(4)|stomach(2)|upper_aerodigestive_tract(3)|urinary_tract(1)	77	all_cancers(12;0.000673)	Lung NSC(34;0.0205)|all_lung(34;0.0264)				TATAGGAGGTCGACCAAATCA	0.303000														62			30		0	0	0.134883	0	0
LSS	4047	broad.mit.edu	37	21	47626684	47626684	+	Splice_Site	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr21:47626684T>G	uc002zij.3	-	16	1547	c.1468_splice	c.e16-1	p.L490_splice	LSS_uc002zil.2_Splice_Site_p.L490_splice|LSS_uc011afv.1_Splice_Site_p.L479_splice|LSS_uc002zik.2_Splice_Site_p.L410_splice	NM_001001438	NP_002331	P48449	ERG7_HUMAN	Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) (LSS), transcript variant 2, mRNA.	490					cholesterol biosynthetic process	endoplasmic reticulum membrane	lanosterol synthase activity			cervix(1)|endometrium(6)|kidney(1)|large_intestine(3)|liver(1)|lung(7)|skin(1)|urinary_tract(1)	21	Breast(49;0.214)					GTTCAGCAGCTGAAATCACAG	0.582000														80			53		0	0	0.139131	0	0
SLC46A3	283537	broad.mit.edu	37	13	29287510	29287510	+	Missense_Mutation	SNP	A	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr13:29287510A>G	uc001usj.3	-	2	909	c.367T>C	c.(367-369)Tat>Cat	p.Y123H	SLC46A3_uc001usg.3_Missense_Mutation_p.Y48H|SLC46A3_uc001usi.3_Missense_Mutation_p.Y123H|SLC46A3_uc001ush.3_Missense_Mutation_p.Y123H|SLC46A3_uc001usk.3_Missense_Mutation_p.Y48H	NM_001135919	NP_001129391	Q7Z3Q1	S46A3_HUMAN	Homo sapiens solute carrier family 46, member 3 (SLC46A3), transcript variant 2, mRNA.	123					transmembrane transport	integral to membrane				central_nervous_system(1)|cervix(1)|endometrium(3)|kidney(1)|large_intestine(5)|lung(2)|prostate(1)|skin(1)	15		Lung SC(185;0.0367)		all cancers(112;0.159)		AAGGCAAAATAGCAAAGCAAA	0.408000														36			12		0	0	0.093190	0	0
CGNL1	84952	broad.mit.edu	37	15	57730838	57730838	+	Missense_Mutation	SNP	C	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr15:57730838C>G	uc010bfw.3	+	2	834	c.641C>G	c.(640-642)aCa>aGa	p.T214R	CGNL1_uc002aeg.3_Missense_Mutation_p.T214R	NM_001252335	NP_001239264	Q0VF96	CGNL1_HUMAN	Homo sapiens cingulin-like 1 (CGNL1), transcript variant 1, mRNA.	214	Head.					myosin complex|tight junction	motor activity			autonomic_ganglia(1)|breast(1)|central_nervous_system(2)|endometrium(5)|kidney(4)|large_intestine(12)|lung(14)|ovary(4)|prostate(4)|skin(10)|stomach(2)|upper_aerodigestive_tract(1)	60				all cancers(107;0.121)|GBM - Glioblastoma multiforme(80;0.186)		TCTGGTGTGACAGCTATTCGT	0.517000														252			148		0	0	0.139131	0	0
LIFR	3977	broad.mit.edu	37	5	38504185	38504185	+	Missense_Mutation	SNP	T	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr5:38504185T>C	uc010ive.1	-	9	1662	c.1330A>G	c.(1330-1332)Att>Gtt	p.I444V	LIFR_uc003jli.2_Missense_Mutation_p.I444V	NM_001127671	NP_002301	P42702	LIFR_HUMAN	Homo sapiens leukemia inhibitory factor receptor alpha (LIFR), transcript variant 1, mRNA.	444	Fibronectin type-III 3.				positive regulation of cell proliferation	extracellular region|integral to plasma membrane	ciliary neurotrophic factor receptor binding|growth factor binding|leukemia inhibitory factor receptor activity			NS(2)|breast(4)|endometrium(6)|kidney(2)|large_intestine(30)|liver(2)|lung(21)|ovary(3)|skin(5)|stomach(1)|urinary_tract(2)	78	all_lung(31;0.00021)					GTTGAATTAATATCCTTCACT	0.269000			T	PLAG1	salivary adenoma									34			16		0	0	0.146539	0	0
CD46	4179	broad.mit.edu	37	1	207940508	207940508	+	Missense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:207940508C>A	uc001hgc.3	+	5	999	c.824C>A	c.(823-825)aCt>aAt	p.T275N	CD46_uc001hgg.3_Missense_Mutation_p.T275N|CD46_uc001hgh.3_Missense_Mutation_p.T275N|CD46_uc001hgi.3_Missense_Mutation_p.T275N|CD46_uc001hgj.3_Missense_Mutation_p.T275N|CD46_uc001hgm.3_Missense_Mutation_p.T275N|CD46_uc001hgl.3_Missense_Mutation_p.T275N|CD46_uc001hgp.3_Missense_Mutation_p.T275N	NM_002389	NP_002380	P15529	MCP_HUMAN	Homo sapiens CD46 molecule, complement regulatory protein (CD46), transcript variant a, mRNA.	275	Sushi 4.				complement activation, classical pathway|innate immune response|interspecies interaction between organisms|single fertilization	inner acrosomal membrane|integral to plasma membrane	protein binding|receptor activity			breast(2)|central_nervous_system(1)|endometrium(1)|large_intestine(7)|lung(6)|prostate(1)|skin(1)	19						AGTAACAGTACTTGGGATCCC	0.358000														33			16		5.03518e-11	5.56832e-11	0.189662	1	0
TMEM132D	121256	broad.mit.edu	37	12	130184819	130184819	+	Silent	SNP	C	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr12:130184819C>G	uc009zyl.1	-	1	832	c.504G>C	c.(502-504)ctG>ctC	p.L168L		NM_133448	NP_597705	Q14C87	T132D_HUMAN	Homo sapiens transmembrane protein 132D (TMEM132D), mRNA.	168						integral to membrane				NS(1)|breast(6)|cervix(2)|endometrium(8)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(33)|liver(1)|lung(69)|ovary(10)|pancreas(2)|prostate(2)|skin(7)|upper_aerodigestive_tract(5)|urinary_tract(2)	152	all_neural(191;0.101)|Medulloblastoma(191;0.163)	all_epithelial(31;0.0934)|Breast(359;0.133)		OV - Ovarian serous cystadenocarcinoma(86;0.000288)|Epithelial(86;0.0116)|all cancers(50;0.0246)		CAAAGACCCTCAGGCACGGCA	0.662000														23			40		0	0	0.139131	0	0
ATR	545	broad.mit.edu	37	3	142274792	142274792	+	Silent	SNP	A	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr3:142274792A>T	uc003eux.4	-	9	2390	c.2268T>A	c.(2266-2268)tcT>tcA	p.S756S		NM_001184	NP_001175	Q13535	ATR_HUMAN	Homo sapiens ataxia telangiectasia and Rad3 related (ATR), mRNA.	756					DNA damage checkpoint|DNA repair|DNA replication|cell cycle|cellular response to UV|cellular response to gamma radiation|multicellular organismal development|negative regulation of DNA replication|peptidyl-serine phosphorylation|positive regulation of DNA damage response, signal transduction by p53 class mediator|protein autophosphorylation|replicative senescence	PML body	ATP binding|DNA binding|MutLalpha complex binding|MutSalpha complex binding|protein serine/threonine kinase activity			NS(1)|breast(10)|central_nervous_system(1)|cervix(1)|endometrium(12)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(20)|liver(2)|lung(45)|ovary(3)|skin(10)|stomach(4)|upper_aerodigestive_tract(2)|urinary_tract(4)	122						CTTTTAGTTGAGAAGATGAAC	0.368000								Other conserved DNA damage response genes						79			40		0	0	0.086207	0	0
CA9	768	broad.mit.edu	37	9	35674197	35674197	+	Nonsense_Mutation	SNP	G	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr9:35674197G>T	uc003zxo.4	+	0	283	c.241G>T	c.(241-243)Gag>Tag	p.E81*	C9orf100_uc003zxl.3_Non-coding_Transcript	NM_001216	NP_001207	Q16790	CAH9_HUMAN	Homo sapiens carbonic anhydrase IX (CA9), mRNA.	81	Proteoglycan-like (PG).				one-carbon metabolic process	integral to membrane|microvillus membrane|nucleolus	carbonate dehydratase activity|zinc ion binding	p.G79_P84delGEEDLP(2)		kidney(1)|large_intestine(3)|lung(5)|ovary(4)|prostate(1)|skin(2)|urinary_tract(1)	17	all_epithelial(49;0.217)		Lung(28;0.00276)|LUSC - Lung squamous cell carcinoma(32;0.00418)|STAD - Stomach adenocarcinoma(86;0.194)			ACCCGGAGAGGAGGATCTACC	0.557000														57			22		7.41877e-09	8.10889e-09	0.062417	1	0
PRKRIP1	79706	broad.mit.edu	37	7	102040096	102040096	+	Splice_Site	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr7:102040096G>A	uc011kkr.1	+	3	361	c.306_splice	c.e3+1	p.K102_splice	PRKRIP1_uc011kkq.1_Splice_Site_p.K45_splice|PRKRIP1_uc003uzh.2_Splice_Site_p.K102_splice			Q9H875	PKRI1_HUMAN	Homo sapiens PRKR interacting protein 1 (IL11 inducible) (PRKRIP1), mRNA.	102	Required for RNA-binding (By similarity).					nucleolus				endometrium(1)|lung(4)|ovary(1)	6						GGCTGAGAAGGTCAGTGAGCC	0.552000														190			133		0	0	0.139131	0	0
SQSTM1	8878	broad.mit.edu	37	5	179248068	179248068	+	Silent	SNP	C	T	T	rs11548639		TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr5:179248068C>T	uc003mkw.4	+	0	227	c.132C>T	c.(130-132)tgC>tgT	p.C44C	SQSTM1_uc011dgr.2_Intron|SQSTM1_uc011dgs.2_Intron|SQSTM1_uc003mkx.3_5'Flank	NM_003900	NP_003891	Q13501	SQSTM_HUMAN	Homo sapiens sequestosome 1 (SQSTM1), transcript variant 1, mRNA.	44	Interaction with LCK.|Interaction with PRKCZ and dimerization (By similarity).|OPR.				anti-apoptosis|apoptosis|cell differentiation|endosome transport|induction of apoptosis by extracellular signals|intracellular signal transduction|macroautophagy|nerve growth factor receptor signaling pathway|positive regulation of transcription from RNA polymerase II promoter|protein localization|regulation of I-kappaB kinase/NF-kappaB cascade|ubiquitin-dependent protein catabolic process	cytosol|late endosome|nucleoplasm	SH2 domain binding|protein kinase C binding|receptor tyrosine kinase binding|ubiquitin binding|zinc ion binding		SQSTM1/ALK(2)	NS(1)|breast(1)|endometrium(1)|large_intestine(2)|liver(2)|lung(5)|ovary(1)	13	all_cancers(89;0.000205)|all_epithelial(37;7.15e-05)|Renal(175;0.000159)|Lung NSC(126;0.00136)|all_lung(126;0.00243)	all_cancers(40;0.0395)|Medulloblastoma(196;0.00498)|all_neural(177;0.0138)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)			CGGGACCCTGCGAGCGGCTGC	0.771000														3			3		0	0	0.021553	0	0
EPHA8	2046	broad.mit.edu	37	1	22927186	22927186	+	Silent	SNP	A	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:22927186A>T	uc001bfx.1	+	13	2546	c.2421A>T	c.(2419-2421)ccA>ccT	p.P807P		NM_020526	NP_065387	P29322	EPHA8_HUMAN	Homo sapiens EPH receptor A8 (EPHA8), transcript variant 1, mRNA.	807	Protein kinase.					integral to plasma membrane	ATP binding|ephrin receptor activity			breast(3)|central_nervous_system(5)|cervix(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(3)|kidney(9)|large_intestine(6)|lung(22)|prostate(2)|skin(2)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(2)	61		Colorectal(325;3.46e-05)|Lung NSC(340;6.55e-05)|all_lung(284;9.87e-05)|Renal(390;0.000219)|Breast(348;0.00222)|Ovarian(437;0.00308)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0227)|OV - Ovarian serous cystadenocarcinoma(117;7.29e-27)|Colorectal(126;1.61e-07)|COAD - Colon adenocarcinoma(152;1.14e-05)|GBM - Glioblastoma multiforme(114;1.74e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000554)|KIRC - Kidney renal clear cell carcinoma(1967;0.00272)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.199)		GGACGGCCCCAGAGGCCATCG	0.682000														84			61		0	0	0.139131	0	0
ZNF665	79788	broad.mit.edu	37	19	53669370	53669370	+	Missense_Mutation	SNP	C	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:53669370C>G	uc010eqm.1	-	3	473	c.373G>C	c.(373-375)Gct>Cct	p.A125P		NM_024733	NP_079009	Q9H7R5	ZN665_HUMAN	Homo sapiens zinc finger protein 665 (ZNF665), mRNA.	60					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(1)|endometrium(2)|kidney(2)|large_intestine(10)|lung(16)|ovary(2)|prostate(1)|upper_aerodigestive_tract(1)	35				GBM - Glioblastoma multiforme(134;0.0196)		TCACGTTGAGCTCTTCTACCA	0.388000														118			60		0	0	0.139131	0	0
UBR4	23352	broad.mit.edu	37	1	19490300	19490300	+	Missense_Mutation	SNP	C	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:19490300C>G	uc001bbi.3	-	33	4726	c.4722G>C	c.(4720-4722)aaG>aaC	p.K1574N	UBR4_uc001bbm.1_Missense_Mutation_p.K785N	NM_020765	NP_065816	Q5T4S7	UBR4_HUMAN	Homo sapiens ubiquitin protein ligase E3 component n-recognin 4 (UBR4), mRNA.	1574					interspecies interaction between organisms	cytoplasm|cytoskeleton|integral to membrane|nucleus	calmodulin binding|ubiquitin-protein ligase activity|zinc ion binding			breast(7)|central_nervous_system(1)|cervix(2)|endometrium(23)|kidney(25)|large_intestine(25)|liver(2)|lung(47)|ovary(10)|pancreas(2)|prostate(7)|skin(5)|stomach(5)|upper_aerodigestive_tract(4)|urinary_tract(6)	171		Colorectal(325;3.46e-05)|Renal(390;0.000147)|all_lung(284;0.000328)|Lung NSC(340;0.000406)|Breast(348;0.000814)|Ovarian(437;0.00774)|Myeloproliferative disorder(586;0.0256)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00674)|BRCA - Breast invasive adenocarcinoma(304;5.43e-05)|Kidney(64;0.000337)|KIRC - Kidney renal clear cell carcinoma(64;0.00426)|STAD - Stomach adenocarcinoma(196;0.00715)|READ - Rectum adenocarcinoma(331;0.0816)		CAACTACATTCTTCTGTGACA	0.403000														93			65		0	0	0.139131	0	0
SALL3	27164	broad.mit.edu	37	18	76754972	76754972	+	Missense_Mutation	SNP	T	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr18:76754972T>C	uc002lmt.3	+	1	2981	c.2981T>C	c.(2980-2982)aTc>aCc	p.I994T	SALL3_uc010dra.3_Intron	NM_171999	NP_741996	Q9BXA9	SALL3_HUMAN	Homo sapiens sal-like 3 (Drosophila) (SALL3), mRNA.	994					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			NS(2)|breast(1)|central_nervous_system(1)|endometrium(5)|kidney(3)|large_intestine(8)|lung(40)|ovary(4)|prostate(5)|skin(2)|stomach(1)|upper_aerodigestive_tract(2)	74		Esophageal squamous(42;0.129)|Melanoma(33;0.16)|Prostate(75;0.167)		OV - Ovarian serous cystadenocarcinoma(15;4.69e-06)|BRCA - Breast invasive adenocarcinoma(31;0.0256)		GCGTTGGAAATCCACTACCGC	0.562000														45			30		0	0	0.125774	0	0
MTOR	2475	broad.mit.edu	37	1	11273603	11273603	+	Silent	SNP	G	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:11273603G>C	uc001asd.3	-	20	3259	c.3138C>G	c.(3136-3138)acC>acG	p.T1046T		NM_004958	NP_004949	P42345	MTOR_HUMAN	Homo sapiens mechanistic target of rapamycin (serine/threonine kinase) (MTOR), mRNA.	1046					T cell costimulation|TOR signaling cascade|cell growth|cellular response to hypoxia|insulin receptor signaling pathway|nerve growth factor receptor signaling pathway|peptidyl-serine phosphorylation|phosphatidylinositol-mediated signaling|protein autophosphorylation|protein catabolic process|response to amino acid stimulus|response to nutrient	Golgi membrane|PML body|TORC1 complex|TORC2 complex|endoplasmic reticulum membrane|lysosome|mitochondrial outer membrane|phosphatidylinositol 3-kinase complex	ATP binding|phosphoprotein binding|protein serine/threonine kinase activity			breast(5)|central_nervous_system(7)|endometrium(20)|kidney(34)|large_intestine(21)|lung(43)|ovary(9)|prostate(3)|skin(4)|upper_aerodigestive_tract(2)|urinary_tract(1)	149						TCTGAATTGAGGTGTTCATGA	0.458000														94			60		0	0	0.139131	0	0
ECD	11319	broad.mit.edu	37	10	74896486	74896486	+	Missense_Mutation	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr10:74896486T>G	uc009xqx.3	-	13	2022	c.1779A>C	c.(1777-1779)aaA>aaC	p.K593N	ECD_uc001jtn.3_Missense_Mutation_p.K560N|ECD_uc009xqy.3_Missense_Mutation_p.K517N|ECD_uc001jto.3_Missense_Mutation_p.K259N	NM_001135752	NP_001129224	O95905	SGT1_HUMAN	Homo sapiens ecdysoneless homolog (Drosophila) (ECD), transcript variant 2, mRNA.	560					regulation of glycolysis|regulation of transcription, DNA-dependent|transcription from RNA polymerase II promoter	cytoplasm|nucleus	transcription coactivator activity			breast(1)|endometrium(3)|kidney(1)|large_intestine(4)|lung(5)|pancreas(1)|prostate(1)|skin(1)|stomach(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	21	Prostate(51;0.0119)					TGGTGAAACTTTTGCTGATGC	0.418000														91			62		0	0	0.139131	0	0
DOT1L	84444	broad.mit.edu	37	19	2191111	2191111	+	Missense_Mutation	SNP	C	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:2191111C>G	uc002lvb.4	+	4	401	c.365C>G	c.(364-366)cCc>cGc	p.P122R		NM_032482	NP_115871	Q8TEK3	DOT1L_HUMAN	Homo sapiens DOT1-like, histone H3 methyltransferase (S. cerevisiae) (DOT1L), mRNA.	122						nucleus	DNA binding|histone-lysine N-methyltransferase activity|protein binding			NS(1)|breast(1)|cervix(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(3)|lung(14)|ovary(2)|pancreas(2)|prostate(1)|upper_aerodigestive_tract(2)|urinary_tract(9)	42		Hepatocellular(1079;0.137)		UCEC - Uterine corpus endometrioid carcinoma (162;6.64e-05)|OV - Ovarian serous cystadenocarcinoma(105;1.09e-113)|Epithelial(107;3.79e-112)|all cancers(105;1.67e-104)|BRCA - Breast invasive adenocarcinoma(158;0.00136)|STAD - Stomach adenocarcinoma(1328;0.18)		GTGACCGACCCCGAGAAGCTC	0.602000														60			29		0	0	0.173368	0	0
ATAD5	79915	broad.mit.edu	37	17	29220728	29220728	+	Missense_Mutation	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr17:29220728T>G	uc002hfs.1	+	20	5200	c.4857T>G	c.(4855-4857)aaT>aaG	p.N1619K		NM_024857	NP_079133	Q96QE3	ATAD5_HUMAN	Homo sapiens ATPase family, AAA domain containing 5 (ATAD5), mRNA.	1619					response to DNA damage stimulus	nucleus	ATP binding|nucleoside-triphosphatase activity			breast(3)|central_nervous_system(1)|cervix(1)|endometrium(8)|kidney(3)|large_intestine(18)|lung(13)|ovary(3)|pancreas(1)	51		all_hematologic(16;0.0202)|Acute lymphoblastic leukemia(14;0.0238)|Myeloproliferative disorder(56;0.0393)				AAGGAAACAATCCAGAGACAA	0.393000														91			24		0	0	0.091800	0	0
RICTOR	253260	broad.mit.edu	37	5	38953603	38953603	+	Missense_Mutation	SNP	C	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr5:38953603C>G	uc003jlo.2	-	27	2772	c.2750G>C	c.(2749-2751)tGg>tCg	p.W917S	RICTOR_uc003jlp.2_Missense_Mutation_p.W917S|RICTOR_uc010ivf.2_Missense_Mutation_p.W632S	NM_152756	NP_689969	Q6R327	RICTR_HUMAN	Homo sapiens RPTOR independent companion of MTOR, complex 2 (RICTOR), mRNA.	917					T cell costimulation|actin cytoskeleton reorganization|embryo development|nerve growth factor receptor signaling pathway|phosphatidylinositol-mediated signaling|positive regulation of TOR signaling cascade|regulation of protein kinase B signaling cascade	TORC2 complex|cytosol	protein binding	p.W917L(2)		NS(1)|breast(4)|central_nervous_system(2)|cervix(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(14)|lung(33)|ovary(3)|prostate(3)|skin(5)	75	all_lung(31;0.000396)					AATTTCTTCCCACTTATCCAA	0.284000														10			2		0	0	0.115264	0	0
PRIC285	85441	broad.mit.edu	37	20	62193087	62193087	+	Missense_Mutation	SNP	T	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr20:62193087T>C	uc002yfm.2	-	12	7595	c.6703A>G	c.(6703-6705)Aga>Gga	p.R2235G	PRIC285_uc002yfl.1_Missense_Mutation_p.R1666G	NM_001037335	NP_001032412	Q9BYK8	PR285_HUMAN	Homo sapiens peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285), transcript variant 1, mRNA.	2235					cellular lipid metabolic process|regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleoplasm	ATP binding|DNA binding|RNA binding|helicase activity|ribonuclease activity|transcription coactivator activity|zinc ion binding	p.L2234L(1)		NS(1)|breast(1)|central_nervous_system(4)|cervix(3)|endometrium(6)|kidney(3)|liver(1)|lung(19)|ovary(1)|prostate(2)|skin(4)|urinary_tract(2)	47	all_cancers(38;2.51e-11)|all_epithelial(29;8.27e-13)		Epithelial(9;1.27e-08)|all cancers(9;7.32e-08)|BRCA - Breast invasive adenocarcinoma(10;5.15e-06)			TCCATCCTTCTCAGGAGCAGT	0.667000														31			19		0	0	0.055883	0	0
GTF3C2	2976	broad.mit.edu	37	2	27565920	27565920	+	Silent	SNP	G	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:27565920G>T	uc002rju.1	-	2	772	c.375C>A	c.(373-375)ccC>ccA	p.P125P	GTF3C2_uc002rjv.1_Silent_p.P114P|GTF3C2_uc002rjw.1_Silent_p.P114P|GTF3C2_uc010eyz.2_Silent_p.P114P	NM_001521	NP_001512	Q8WUA4	TF3C2_HUMAN	Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 1, mRNA.	114						transcription factor TFIIIC complex				central_nervous_system(4)|endometrium(6)|kidney(1)|large_intestine(9)|lung(10)|ovary(1)|pancreas(1)|prostate(2)|skin(2)|urinary_tract(2)	38	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)					TAGGCTGTTGGGGCCTTTTGG	0.537000														143			64		7.59065e-32	9.1477e-32	0.139131	1	0
MCTP2	55784	broad.mit.edu	37	15	94841734	94841734	+	Silent	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr15:94841734C>T	uc002btj.3	+	0	305	c.240C>T	c.(238-240)agC>agT	p.S80S	MCTP2_uc010urg.1_Silent_p.S80S|MCTP2_uc002bti.2_Silent_p.S80S|MCTP2_uc010boj.3_5'UTR|MCTP2_uc010bok.3_Silent_p.S80S|MCTP2_uc002btg.4_Silent_p.S80S|MCTP2_uc002bth.4_Silent_p.S80S	NM_018349	NP_060819	Q6DN12	MCTP2_HUMAN	Homo sapiens multiple C2 domains, transmembrane 2 (MCTP2), transcript variant 1, mRNA.	80					calcium-mediated signaling	integral to membrane|membrane fraction	calcium ion binding			autonomic_ganglia(1)|breast(4)|cervix(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(2)|kidney(1)|large_intestine(12)|liver(1)|lung(12)|ovary(1)|pancreas(1)|skin(9)|stomach(2)	49	Lung NSC(78;0.0821)|all_lung(78;0.148)		BRCA - Breast invasive adenocarcinoma(143;0.0323)|OV - Ovarian serous cystadenocarcinoma(32;0.0593)			CGGTGCCCAGCAGTCTGTCCA	0.587000														154			68		0	0	0.139131	0	0
abParts	0	broad.mit.edu	37	22	22664606	22664606	+	RNA	SNP	A	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr22:22664606A>G	uc021wml.1	+	32		c.2706A>G			abParts_uc011aiq.1_Non-coding_Transcript					Parts of antibodies, mostly variable regions.																		GTCTTCATGCAAACTTGGTAT	0.398000														54			3		0	0	0.115264	0	0
PNPLA1	285848	broad.mit.edu	37	6	36269817	36269817	+	Missense_Mutation	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr6:36269817G>A	uc010jwf.2	+	5	955	c.955G>A	c.(955-957)Gat>Aat	p.D319N	PNPLA1_uc010jwe.1_Missense_Mutation_p.D233N|PNPLA1_uc003olw.1_Missense_Mutation_p.D224N	NM_001145717	NP_775947	Q8N8W4	PLPL1_HUMAN	Homo sapiens patatin-like phospholipase domain containing 1 (PNPLA1), transcript variant 3, mRNA.	319					lipid catabolic process		hydrolase activity			breast(1)|kidney(1)|large_intestine(4)|lung(9)|pancreas(1)|skin(4)|upper_aerodigestive_tract(2)	22						TCCCAAAGGGGATGGAAGGGG	0.572000											OREG0017382	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)		89			48		0	0	0.139131	0	0
TP53BP1	7158	broad.mit.edu	37	15	43724401	43724401	+	Silent	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr15:43724401G>A	uc001zrs.3	-	16	3799	c.3651C>T	c.(3649-3651)ctC>ctT	p.L1217L	TP53BP1_uc010udp.2_Silent_p.L1217L|TP53BP1_uc001zrq.4_Silent_p.L1222L|TP53BP1_uc001zrr.4_Silent_p.L1222L|TP53BP1_uc010udq.1_Silent_p.L1222L	NM_005657	NP_005648	Q12888	TP53B_HUMAN	Homo sapiens tumor protein p53 binding protein 1 (TP53BP1), transcript variant 3, mRNA.	1217					double-strand break repair via homologous recombination|positive regulation of transcription from RNA polymerase II promoter	condensed chromosome kinetochore|cytoplasm|nucleoplasm	RNA polymerase II activating transcription factor binding|RNA polymerase II transcription cofactor activity|p53 binding			breast(4)|endometrium(5)|kidney(7)|large_intestine(22)|lung(13)|ovary(4)|pancreas(2)|prostate(1)|skin(10)|upper_aerodigestive_tract(1)|urinary_tract(3)	72		all_cancers(109;6.94e-11)|all_epithelial(112;2.69e-09)|Lung NSC(122;7.86e-07)|all_lung(180;7.84e-06)|Melanoma(134;0.0728)		GBM - Glioblastoma multiforme(94;1.59e-06)		CCTGGCTATGGAGCGACTCTG	0.483000								Other conserved DNA damage response genes						19			12		0	0	0.105934	0	0
FAM149A	25854	broad.mit.edu	37	4	187077186	187077186	+	Missense_Mutation	SNP	A	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:187077186A>G	uc003iyt.4	+	6	995	c.416A>G	c.(415-417)cAg>cGg	p.Q139R	FAM149A_uc011cla.1_Missense_Mutation_p.Q139R|FAM149A_uc010isj.2_Missense_Mutation_p.Q139R|FAM149A_uc010isk.2_Non-coding_Transcript|FAM149A_uc010isl.3_Missense_Mutation_p.Q139R|FAM149A_uc011clb.2_Missense_Mutation_p.Q139R	NM_015398	NP_056213	A5PLN7	F149A_HUMAN	Homo sapiens family with sequence similarity 149, member A (FAM149A), transcript variant 1, mRNA.	430	Pro-rich.									breast(2)|endometrium(1)|haematopoietic_and_lymphoid_tissue(2)|large_intestine(8)|lung(8)|pancreas(1)|prostate(1)|skin(2)	25		all_cancers(14;4.27e-52)|all_epithelial(14;7.69e-39)|all_lung(41;1.34e-13)|Lung NSC(41;3.58e-13)|Melanoma(20;1.91e-06)|Colorectal(36;0.0066)|Hepatocellular(41;0.00886)|Renal(120;0.00988)|Prostate(90;0.00996)|all_hematologic(60;0.014)|all_neural(102;0.243)		OV - Ovarian serous cystadenocarcinoma(60;1.19e-10)|BRCA - Breast invasive adenocarcinoma(30;1.22e-05)|GBM - Glioblastoma multiforme(59;0.000122)|STAD - Stomach adenocarcinoma(60;0.000288)|LUSC - Lung squamous cell carcinoma(40;0.00241)|READ - Rectum adenocarcinoma(43;0.166)		AAACCAGCTCAGCCCGGTAGG	0.433000														61			37		0	0	0.214465	0	0
ZNF777	27153	broad.mit.edu	37	7	149129443	149129443	+	Silent	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr7:149129443C>T	uc003wfv.3	-	5	2083	c.1920G>A	c.(1918-1920)gaG>gaA	p.E640E		NM_015694	NP_056509	Q9ULD5	ZN777_HUMAN	Homo sapiens zinc finger protein 777 (ZNF777), mRNA.	640					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding	p.P639L(1)		large_intestine(5)|lung(17)|ovary(1)|skin(2)|urinary_tract(1)	26	Melanoma(164;0.165)		OV - Ovarian serous cystadenocarcinoma(82;0.00358)			TGCTGTCGCACTCGGGGCACT	0.652000														259			157		0	0	0.139131	0	0
ANKRD20A2	441430	broad.mit.edu	37	2	95522772	95522772	+	RNA	SNP	T	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:95522772T>C	uc010fhp.3	-	0		c.49A>G						Q5SQ80	A20A2_HUMAN	Homo sapiens ankyrin repeat domain 20 family, member A8, pseudogene (ANKRD20A8P), non-coding RNA.									p.E49G(1)		large_intestine(1)|lung(1)|ovary(1)|urinary_tract(1)	4						GCGCTCCACCTCCGCGGCGTC	0.682000														123			4		0	0	0.150653	0	0
MADD	8567	broad.mit.edu	37	11	47304129	47304129	+	Missense_Mutation	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr11:47304129T>G	uc001ner.1	+	8	1858	c.1667T>G	c.(1666-1668)cTt>cGt	p.L556R	MADD_uc001neq.2_Missense_Mutation_p.L556R|MADD_uc001nev.1_Missense_Mutation_p.L556R|MADD_uc001nes.1_Missense_Mutation_p.L556R|MADD_uc001net.1_Missense_Mutation_p.L556R|MADD_uc009yln.1_Missense_Mutation_p.L556R|MADD_uc001neu.1_Missense_Mutation_p.L556R|MADD_uc001nez.2_Missense_Mutation_p.L556R|MADD_uc001new.2_Missense_Mutation_p.L556R|MADD_uc001nex.2_Missense_Mutation_p.L556R	NM_003682	NP_003673	Q8WXG6	MADD_HUMAN	Homo sapiens MAP-kinase activating death domain (MADD), transcript variant 4, mRNA.	556	dDENN.				activation of MAPK activity|apoptosis|cell surface receptor linked signaling pathway|regulation of apoptosis|regulation of cell cycle	cytoplasm|integral to membrane|plasma membrane	Rab guanyl-nucleotide exchange factor activity|death receptor binding|protein kinase activator activity			breast(7)|central_nervous_system(2)|endometrium(9)|kidney(3)|large_intestine(19)|lung(26)|ovary(6)|prostate(2)|skin(5)|upper_aerodigestive_tract(3)|urinary_tract(2)	84				Lung(87;0.182)		GAATGGATCCTTAACCCCACC	0.537000														74			42		0	0	0.124865	0	0
E2F8	79733	broad.mit.edu	37	11	19251275	19251275	+	Missense_Mutation	SNP	A	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr11:19251275A>T	uc001mpm.3	-	9	2141	c.1619T>A	c.(1618-1620)cTg>cAg	p.L540Q	E2F8_uc009yhv.3_Intron|E2F8_uc001mpn.4_Missense_Mutation_p.L540Q	NM_024680	NP_078956	A0AVK6	E2F8_HUMAN	Homo sapiens E2F transcription factor 8 (E2F8), transcript variant 1, mRNA.	540					cell cycle	transcription factor complex	DNA binding|sequence-specific DNA binding transcription factor activity			breast(2)|endometrium(9)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(10)|lung(12)|prostate(1)|skin(2)|stomach(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	42						CGTTGGGCTCAGGCCTTGGGG	0.582000														216			123		0	0	0.139131	0	0
EDAR	10913	broad.mit.edu	37	2	109527287	109527287	+	Silent	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:109527287C>T	uc010fjn.3	-	7	1318	c.771G>A	c.(769-771)ccG>ccA	p.P257P	EDAR_uc010yws.2_Silent_p.P257P|EDAR_uc002teq.4_Silent_p.P225P	NM_022336	NP_071731	Q9UNE0	EDAR_HUMAN	Homo sapiens ectodysplasin A receptor (EDAR), mRNA.	225					apoptosis|cell differentiation	integral to membrane	protein binding|transmembrane receptor activity			NS(1)|breast(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(2)|large_intestine(3)|lung(6)|prostate(1)|skin(1)	16						CGCTCTTCCCCGGGTGGCTGG	0.647000														72			35		0	0	0.131918	0	0
ARSA	410	broad.mit.edu	37	22	51063617	51063617	+	Missense_Mutation	SNP	T	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr22:51063617T>G	uc003bna.4	-	7	1490	c.1228A>C	c.(1228-1230)Acc>Ccc	p.T410P	ARSA_uc021wsd.1_Missense_Mutation_p.T496P|ARSA_uc021wse.1_Missense_Mutation_p.T496P|ARSA_uc021wsf.1_Missense_Mutation_p.T496P|ARSA_uc003bmz.4_Missense_Mutation_p.T494P	NM_001085428	NP_001078897	P15289	ARSA_HUMAN	Homo sapiens arylsulfatase A (ARSA), transcript variant 5, mRNA.	494						lysosome	arylsulfatase activity|calcium ion binding|cerebroside-sulfatase activity			endometrium(1)|large_intestine(1)|lung(5)|pancreas(1)|skin(1)	9		all_cancers(38;8.8e-15)|all_epithelial(38;1.12e-12)|all_lung(38;3.07e-05)|Breast(42;6.27e-05)|Lung NSC(38;0.000813)|Ovarian(80;0.0221)|Hepatocellular(38;0.0691)|Lung SC(80;0.113)		BRCA - Breast invasive adenocarcinoma(115;0.205)|LUAD - Lung adenocarcinoma(64;0.247)	Micafungin(DB01141)	GGGCGGGGGGTGCAGCCAGGA	0.692000														18			6		0	0	0.029380	0	0
NDST4	64579	broad.mit.edu	37	4	115767018	115767018	+	Silent	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:115767018G>A	uc003ibu.3	-	9	2755	c.2076C>T	c.(2074-2076)atC>atT	p.I692I	NDST4_uc010imw.3_Non-coding_Transcript	NM_022569	NP_072091	Q9H3R1	NDST4_HUMAN	Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 (NDST4), mRNA.	692	Heparan sulfate N-sulfotransferase 4.					Golgi membrane|integral to membrane	[heparan sulfate]-glucosamine N-sulfotransferase activity|hydrolase activity			NS(1)|central_nervous_system(1)|cervix(1)|endometrium(5)|kidney(4)|large_intestine(5)|lung(43)|ovary(1)|prostate(7)|skin(11)|upper_aerodigestive_tract(1)|urinary_tract(1)	81		Ovarian(17;0.156)		OV - Ovarian serous cystadenocarcinoma(123;0.000562)		GGTCAATGAGGATGGTGATGA	0.433000														59			37		0	0	0.124865	0	0
SLC36A3	285641	broad.mit.edu	37	5	150660717	150660717	+	Nonsense_Mutation	SNP	G	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr5:150660717G>T	uc003ltx.2	-	9	1544	c.1125C>A	c.(1123-1125)taC>taA	p.Y375*	SLC36A3_uc003ltv.2_Nonsense_Mutation_p.Y319*|SLC36A3_uc003ltw.2_Nonsense_Mutation_p.Y334*	NM_001145017	NP_001138489	Q495N2	S36A3_HUMAN	Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 3 (SLC36A3), transcript variant 1, mRNA.	334						integral to membrane				breast(1)|endometrium(2)|kidney(1)|large_intestine(4)|lung(6)|ovary(2)|skin(1)|stomach(2)|urinary_tract(2)	21		Medulloblastoma(196;0.109)|all_hematologic(541;0.243)	KIRC - Kidney renal clear cell carcinoma(527;0.000785)|Kidney(363;0.00101)			TGCCGATAGAGTACATCAGCT	0.522000														91			61		4.67498e-28	5.4931e-28	0.139131	1	0
ORC2	4999	broad.mit.edu	37	2	201790595	201790595	+	Missense_Mutation	SNP	C	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:201790595C>A	uc002uwr.3	-	12	1382	c.1111G>T	c.(1111-1113)Gat>Tat	p.D371Y		NM_006190	NP_006181	Q13416	ORC2_HUMAN	Homo sapiens origin recognition complex, subunit 2 (ORC2), transcript variant 1, mRNA.	371					DNA-dependent DNA replication initiation|G1/S transition of mitotic cell cycle|M/G1 transition of mitotic cell cycle|S phase of mitotic cell cycle|cell cycle checkpoint|negative regulation of transcription from RNA polymerase II promoter	nuclear origin of replication recognition complex|nucleoplasm	DNA replication origin binding|protein binding	p.L370L(1)		breast(1)|endometrium(1)|large_intestine(2)|lung(10)|ovary(1)|skin(4)|upper_aerodigestive_tract(1)	20						TCTAGCTGATCCAGTATACTG	0.348000														104			66		2.23399e-28	2.65817e-28	0.139131	1	0
AASDH	132949	broad.mit.edu	37	4	57248668	57248668	+	Missense_Mutation	SNP	A	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:57248668A>T	uc003hbn.3	-	2	479	c.326T>A	c.(325-327)aTc>aAc	p.I109N	AASDH_uc010ihb.3_5'UTR|AASDH_uc003hbo.3_Missense_Mutation_p.I9N|AASDH_uc011caa.2_Intron|AASDH_uc011cab.2_5'UTR|AASDH_uc010ihc.3_Missense_Mutation_p.I109N|AASDH_uc003hbp.3_Missense_Mutation_p.I109N|AASDH_uc003hbq.1_Missense_Mutation_p.I109N	NM_181806	NP_861522	Q4L235	ACSF4_HUMAN	Homo sapiens aminoadipate-semialdehyde dehydrogenase (AASDH), mRNA.	109					fatty acid metabolic process		ATP binding|acid-thiol ligase activity|acyl carrier activity|cofactor binding			endometrium(2)|kidney(2)|large_intestine(8)|lung(17)|ovary(4)|prostate(3)|skin(2)|stomach(1)|urinary_tract(1)	40	Glioma(25;0.08)|all_neural(26;0.101)	all_hematologic(202;0.0017)				TTCAACAAGGATATACTTTAG	0.323000														26			16		0	0	0.132662	0	0
SPINT1	6692	broad.mit.edu	37	15	41146021	41146021	+	Silent	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr15:41146021C>T	uc001zna.3	+	4	1059	c.855C>T	c.(853-855)ggC>ggT	p.G285G	SPINT1_uc001znb.3_Silent_p.G285G|SPINT1_uc001znc.3_Silent_p.G285G|SPINT1_uc010ucs.2_Silent_p.G285G	NM_181642	NP_857593	O43278	SPIT1_HUMAN	Homo sapiens serine peptidase inhibitor, Kunitz type 1 (SPINT1), transcript variant 1, mRNA.	285	BPTI/Kunitz inhibitor 1.					extracellular region|membrane fraction	protein binding|serine-type endopeptidase inhibitor activity			central_nervous_system(1)|kidney(2)|large_intestine(1)|lung(9)|ovary(1)|prostate(1)|skin(1)	16		all_cancers(109;1.35e-17)|all_epithelial(112;3.78e-15)|Lung NSC(122;9.68e-11)|all_lung(180;2.25e-09)|Melanoma(134;0.0574)|Ovarian(310;0.0822)|Colorectal(260;0.0946)		GBM - Glioblastoma multiforme(113;2.91e-05)|COAD - Colon adenocarcinoma(120;0.153)|BRCA - Breast invasive adenocarcinoma(123;0.166)		GCTGCTTGGGCAACAAGAACA	0.572000														153			90		0	0	0.139131	0	0
ABCG2	9429	broad.mit.edu	37	4	89039327	89039327	+	Silent	SNP	A	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr4:89039327A>G	uc003hrg.3	-	6	1268	c.775T>C	c.(775-777)Ttg>Ctg	p.L259L	ABCG2_uc003hrh.3_Silent_p.L259L|ABCG2_uc003hrf.3_Silent_p.L129L	NM_004827	NP_004818	Q9UNQ0	ABCG2_HUMAN	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 2 (ABCG2), mRNA.	259	ABC transporter.				cellular iron ion homeostasis|urate metabolic process	integral to membrane|plasma membrane	ATP binding|heme transporter activity|protein homodimerization activity|xenobiotic-transporting ATPase activity			breast(5)|central_nervous_system(2)|endometrium(4)|kidney(2)|large_intestine(13)|lung(10)|prostate(2)|skin(2)|stomach(1)|upper_aerodigestive_tract(1)	42		Hepatocellular(203;0.114)		OV - Ovarian serous cystadenocarcinoma(123;7.02e-05)	Imatinib(DB00619)|Mitoxantrone(DB01204)|Nicardipine(DB00622)|Nitrendipine(DB01054)|Rosuvastatin(DB01098)|Saquinavir(DB01232)|Topotecan(DB01030)	CCTGAGGCCAATAAGGTGAGG	0.433000														50			28		0	0	0.134883	0	0
DHDH	27294	broad.mit.edu	37	19	49438360	49438360	+	Missense_Mutation	SNP	C	T	T			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr19:49438360C>T	uc002ple.1	+	1	234	c.194C>T	c.(193-195)cCg>cTg	p.P65L		NM_014475	NP_055290	Q9UQ10	DHDH_HUMAN	Homo sapiens dihydrodiol dehydrogenase (dimeric) (DHDH), mRNA.	65					carbohydrate metabolic process		D-xylose 1-dehydrogenase (NADP+) activity|NAD(P)+ transhydrogenase activity|binding|electron carrier activity|trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity			central_nervous_system(1)|large_intestine(3)|lung(3)|ovary(1)|soft_tissue(1)	9		all_epithelial(76;5.29e-07)|all_lung(116;1.7e-06)|Lung NSC(112;3.55e-06)|all_neural(266;0.0189)|Ovarian(192;0.0261)		OV - Ovarian serous cystadenocarcinoma(262;0.000158)|all cancers(93;0.000258)|Epithelial(262;0.0173)|GBM - Glioblastoma multiforme(486;0.0179)		GCCAAGGACCCGAGCGTGGGT	0.692000														4			3		0	0	0.150653	0	0
GTF3C5	9328	broad.mit.edu	37	9	135929299	135929299	+	Missense_Mutation	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr9:135929299G>A	uc004ccj.4	+	5	1295	c.958G>A	c.(958-960)Gat>Aat	p.D320N	GTF3C5_uc010mzz.2_Missense_Mutation_p.D195N|GTF3C5_uc004cci.4_Missense_Mutation_p.D320N	NM_001122823	NP_001116295	Q9Y5Q8	TF3C5_HUMAN	Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa (GTF3C5), transcript variant 1, mRNA.	320						transcription factor TFIIIC complex	DNA binding|protein binding			endometrium(5)|kidney(1)|large_intestine(7)|lung(6)|pancreas(1)|prostate(1)	21				OV - Ovarian serous cystadenocarcinoma(145;4.01e-06)|Epithelial(140;4e-05)		TCAAGTCCTCGATTTCCGAAT	0.443000														106			61		0	0	0.139131	0	0
EML4	27436	broad.mit.edu	37	2	42488420	42488420	+	Silent	SNP	T	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:42488420T>C	uc002rsi.3	+	3	760	c.498T>C	c.(496-498)gcT>gcC	p.A166A	EML4_uc002rsh.4_Silent_p.A166A|EML4_uc010fap.3_Intron	NM_019063	NP_061936	Q9HC35	EMAL4_HUMAN	Homo sapiens echinoderm microtubule associated protein like 4 (EML4), transcript variant 1, mRNA.	166					microtubule-based process|mitosis	cytoplasm|microtubule	protein binding		EML4/ALK(543)	NS(2)|breast(1)|central_nervous_system(1)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(3)|ovary(2)|skin(1)|upper_aerodigestive_tract(1)	12						GCAAGAATGCTACTCCCACCA	0.423000			T	ALK	NSCLC									69			27		0	0	0.108266	0	0
OSBPL10	114884	broad.mit.edu	37	3	31774841	31774841	+	Missense_Mutation	SNP	G	A	A			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr3:31774841G>A	uc021wuu.1	-	5	1674	c.1003C>T	c.(1003-1005)Ctt>Ttt	p.L335F	OSBPL10_uc003ceu.1_Missense_Mutation_p.L92F|OSBPL10_uc011axf.2_Missense_Mutation_p.L271F	NM_017784	NP_060254	Q9BXB5	OSB10_HUMAN	Homo sapiens oxysterol binding protein-like 10 (OSBPL10), transcript variant 1, mRNA.	335					lipid transport		lipid binding			breast(1)|endometrium(1)|kidney(1)|large_intestine(7)|lung(15)|prostate(2)|skin(3)|upper_aerodigestive_tract(3)|urinary_tract(1)	34				STAD - Stomach adenocarcinoma(1;0.00406)		AAAGAGCCAAGTGTCCCATTT	0.473000														177			75		0	0	0.139131	0	0
ZMYM6	9204	broad.mit.edu	37	1	35457962	35457962	+	Frame_Shift_Del	DEL	T	-	-			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr1:35457962delT	uc001byh.3	-	14	2247	c.2019delA	c.(2017-2019)aaafs	p.K673fs	ZMYM6_uc001byf.1_Frame_Shift_Del_p.K673fs|ZMYM6_uc021olg.1_5'UTR|ZMYM6_uc010oht.2_Frame_Shift_Del_p.K576fs|ZMYM6_uc009vup.3_Frame_Shift_Del_p.K479fs|ZMYM6_uc009vuq.1_Frame_Shift_Del_p.K673fs	NM_007167	NP_009098	O95789	ZMYM6_HUMAN	Homo sapiens zinc finger, MYM-type 6 (ZMYM6), mRNA.	673					multicellular organismal development	nucleus	DNA binding|zinc ion binding	p.M672K(1)		breast(1)|endometrium(8)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(12)|lung(10)|ovary(4)|pancreas(1)|prostate(1)|skin(1)	44		Myeloproliferative disorder(586;0.0255)|all_neural(195;0.13)				AAGATGGAAATTTCATAGCAT	0.383													---	112	---	---	54	---					
GTF3C2	2976	broad.mit.edu	37	2	27565919	27565920	+	Frame_Shift_Ins	INS	-	TGGCCTTT	TGGCCTTT			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:27565919_27565920insTGGCCTTT	uc002rju.1	-	2	772_773	c.375_376insAAAGGCCA	c.(373-378)ccccaafs	p.P125fs	GTF3C2_uc002rjv.1_Frame_Shift_Ins_p.P114fs|GTF3C2_uc002rjw.1_Frame_Shift_Ins_p.P114fs|GTF3C2_uc010eyz.2_Frame_Shift_Ins_p.P114fs	NM_001521	NP_001512	Q8WUA4	TF3C2_HUMAN	Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 1, mRNA.	114						transcription factor TFIIIC complex				central_nervous_system(4)|endometrium(6)|kidney(1)|large_intestine(9)|lung(10)|ovary(1)|pancreas(1)|prostate(2)|skin(2)|urinary_tract(2)	38	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)					TTAGGCTGTTGGGGCCTTTTGG	0.535													---	199	---	---	28	---					
ANTXR1	84168	broad.mit.edu	37	2	69472576	69472579	+	Frame_Shift_Del	DEL	GCAC	-	-			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:69472576_69472579delGCAC	uc002sfg.3	+	17	2010_2013	c.1654_1657delGCAC	c.(1654-1659)gcacctfs	p.A552fs		NM_032208	NP_115584	Q9H6X2	ANTR1_HUMAN	Homo sapiens anthrax toxin receptor 1 (ANTXR1), transcript variant 1, mRNA.	552	Pro-rich.				actin cytoskeleton reorganization|substrate adhesion-dependent cell spreading	filopodium membrane|integral to membrane|lamellipodium membrane	actin filament binding|collagen binding|metal ion binding|protein binding|transmembrane receptor activity			haematopoietic_and_lymphoid_tissue(1)|large_intestine(5)|lung(16)|ovary(2)|skin(3)|stomach(1)|upper_aerodigestive_tract(1)	29						tcccaacagggcacctcctccctc	0.647									Familial Infantile Hemangioma				---	65	---	---	36	---					
XRCC5	7520	broad.mit.edu	37	2	216981563	216981564	+	Frame_Shift_Ins	INS	-	C	C			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr2:216981563_216981564insC	uc002vfy.3	+	2	457_458	c.317_318insC	c.(316-318)gacfs	p.D106fs	XRCC5_uc002vfz.3_5'Flank	NM_021141	NP_066964	P13010	XRCC5_HUMAN	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) (XRCC5), mRNA.	106					double-strand break repair via nonhomologous end joining|initiation of viral infection|negative regulation of transcription, DNA-dependent|provirus integration|telomere maintenance|transcription, DNA-dependent	Ku70:Ku80 complex|nonhomologous end joining complex|nuclear telomere cap complex|nucleoplasm	ATP binding|ATP-dependent DNA helicase activity|double-stranded DNA binding|protein C-terminus binding|telomeric DNA binding|transcription regulatory region DNA binding			endometrium(1)|kidney(3)|large_intestine(8)|lung(9)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)	24		Renal(323;0.0328)		Epithelial(149;9.78e-06)|all cancers(144;0.000632)|LUSC - Lung squamous cell carcinoma(224;0.00871)|Lung(261;0.0117)		CAACAGGCTGACTGTATCCTTT	0.421								Non-homologous end-joining					---	50	---	---	24	---					
PCDHGC5	56097	broad.mit.edu	37	5	140735217	140735218	+	Frame_Shift_Ins	INS	-	G	G			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr5:140735217_140735218insG	uc003ljq.2	+	0	450_451	c.450_451insG	c.(448-453)gcaagafs	p.A150fs	PCDHGC5_uc003lji.2_Intron|PCDHGC5_uc003ljk.2_Intron|PCDHGC5_uc003ljm.2_Intron|PCDHGC5_uc003ljo.2_Intron|PCDHGC5_uc003ljp.1_Frame_Shift_Ins_p.A150fs	NM_018917	NP_061740	Q9Y5F6	PCDGM_HUMAN	Homo sapiens protocadherin gamma subfamily A, 4 (PCDHGA4), transcript variant 1, mRNA.	150	Cadherin 2.				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			breast(2)|central_nervous_system(2)|endometrium(6)|kidney(4)|large_intestine(4)|lung(10)|ovary(4)|prostate(1)|urinary_tract(2)	35			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			ATCCTGGGGCAAGATTTCCTCT	0.450													---	57	---	---	22	---					
HECA	51696	broad.mit.edu	37	6	139495590	139495590	+	Frame_Shift_Del	DEL	A	-	-			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr6:139495590delA	uc003qin.3	+	2	1666	c.1381delA	c.(1381-1383)aagfs	p.K461fs		NM_016217	NP_057301	Q9UBI9	HDC_HUMAN	Homo sapiens headcase homolog (Drosophila) (HECA), mRNA.	461					respiratory tube development					endometrium(4)|kidney(1)|large_intestine(3)|lung(4)|ovary(1)|prostate(1)|skin(1)	15				GBM - Glioblastoma multiforme(68;0.000252)|OV - Ovarian serous cystadenocarcinoma(155;0.000387)		CATCTGCATCAAGTGTAAGTC	0.547													---	122	---	---	59	---					
COL5A1	1289	broad.mit.edu	37	9	137593045	137593045	+	Frame_Shift_Del	DEL	A	-	-			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr9:137593045delA	uc004cfe.3	+	3	902	c.520delA	c.(520-522)aagfs	p.K174fs		NM_000093	NP_000084	P20908	CO5A1_HUMAN	Homo sapiens collagen, type V, alpha 1 (COL5A1), mRNA.	174	Laminin G-like.|TSP N-terminal.				axon guidance|cell adhesion|collagen biosynthetic process|collagen fibril organization|eye morphogenesis|fibril organization|integrin biosynthetic process|skin development|wound healing, spreading of epidermal cells	collagen type V	heparin binding|integrin binding|platelet-derived growth factor binding|proteoglycan binding			NS(1)|breast(3)|central_nervous_system(1)|cervix(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(26)|liver(2)|lung(36)|ovary(4)|pancreas(4)|prostate(5)|skin(10)|stomach(2)|upper_aerodigestive_tract(2)|urinary_tract(4)	115		Myeloproliferative disorder(178;0.0341)		all cancers(34;2.28e-08)|OV - Ovarian serous cystadenocarcinoma(145;6.03e-08)|Epithelial(140;6.4e-08)|GBM - Glioblastoma multiforme(294;0.131)		CAGCGTCCACAAGAAAAATGT	0.478													---	50	---	---	28	---					
A2ML1	144568	broad.mit.edu	37	12	9006738	9006738	+	Frame_Shift_Del	DEL	A	-	-			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr12:9006738delA	uc001quz.4	+	20	2703	c.2605delA	c.(2605-2607)actfs	p.T869fs	A2ML1_uc001qva.1_Frame_Shift_Del_p.T449fs|A2ML1_uc010sgm.2_Frame_Shift_Del_p.T369fs	NM_144670	NP_653271	B3KVV6	B3KVV6_HUMAN	Homo sapiens alpha-2-macroglobulin-like 1 (A2ML1), mRNA.	713						extracellular space	endopeptidase inhibitor activity			NS(2)|breast(5)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(18)|liver(2)|lung(36)|ovary(2)|skin(4)|stomach(1)|urinary_tract(1)	80						CATTAACTTTACTATTAGTAC	0.468													---	63	---	---	72	---					
PTPRM	5797	broad.mit.edu	37	18	7567846	7567846	+	Frame_Shift_Del	DEL	T	-	-			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr18:7567846delT	uc002knn.4	+	0	533	c.30delT	c.(28-30)actfs	p.T10fs	PTPRM_uc010dkv.3_Frame_Shift_Del_p.T10fs	NM_002845	NP_002836	P28827	PTPRM_HUMAN	Homo sapiens protein tyrosine phosphatase, receptor type, M (PTPRM), transcript variant 2, mRNA.	10					homophilic cell adhesion|negative regulation of angiogenesis|negative regulation of endothelial cell migration|negative regulation of endothelial cell proliferation|response to drug|retina layer formation|retinal ganglion cell axon guidance	cell-cell adherens junction|integral to plasma membrane|lamellipodium|perinuclear region of cytoplasm	cadherin binding|transmembrane receptor protein tyrosine phosphatase activity			breast(3)|central_nervous_system(1)|cervix(3)|endometrium(8)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(32)|lung(25)|ovary(2)|prostate(4)|skin(2)|stomach(1)|upper_aerodigestive_tract(2)	90		Colorectal(10;0.234)				GCCTGGCGACTTTGGCCGGAC	0.766													---	83	---	---	46	---					
TOP3B	8940	broad.mit.edu	37	22	22319734	22319735	+	In_Frame_Ins	INS	-	TTG	TTG			TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr22:22319734_22319735insTTG	uc002zvs.3	-	8	1300_1301	c.865_866insCAA	c.(865-867)agc>aCAAgc	p.288_289insT	TOP3B_uc010gtm.2_5'UTR|TOP3B_uc002zvt.4_In_Frame_Ins_p.288_289insT|TOP3B_uc010gtl.3_In_Frame_Ins_p.288_289insT	NM_003935	NP_003926	O95985	TOP3B_HUMAN	Homo sapiens topoisomerase (DNA) III beta (TOP3B), mRNA.	288					DNA topological change	nucleus	ATP binding|DNA topoisomerase type I activity|protein binding			breast(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(2)|kidney(5)|large_intestine(4)|lung(9)|ovary(1)	26	Colorectal(54;0.105)			READ - Rectum adenocarcinoma(21;0.145)		TTCTTTCCTGCTTGTGGCCTCC	0.535													---	41	---	---	14	---					
CYP2D6	1565	broad.mit.edu	37	22	42523507	42523516	+	Frame_Shift_Del	DEL	AGGGGGACGA	-	-	rs149686350	byFrequency	TCGA-B9-4113-01A-01D-1252-08	TCGA-B9-4113-11A-01D-1252-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	527ea66a-fb9e-4308-b49d-48226ac05304	881301ff-ec26-46fd-834f-93d9b3ec8da0	g.chr22:42523507_42523516delAGGGGGACGA	uc003bce.3	-	6	1196_1205	c.1106_1115delTCGTCCCCCT	c.(1105-1116)atcgtccccctgfs	p.I369fs	LOC100132273_uc003bcd.1_Intron|CYP2D6_uc010gyu.3_Frame_Shift_Del_p.I63fs|CYP2D6_uc003bcf.3_Frame_Shift_Del_p.I318fs	NM_000106	NP_000097	Q6NWU0	Q6NWU0_HUMAN	Homo sapiens cytochrome P450, family 2, subfamily D, polypeptide 6 (CYP2D6), transcript variant 1, mRNA.	369							electron carrier activity|heme binding|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	p.I318I(1)|p.I369I(1)		NS(1)|breast(2)|endometrium(1)|large_intestine(2)|lung(4)|prostate(7)|skin(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	21						GGTCACACCCAGGGGGACGATGTCCCCAAA	0.624													---	125	---	---	14	---					
