Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
FLG	2312	broad.mit.edu	36	1	150549287	150549287	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	150549287	150549287	FLG	1	G	G	A	37
FLG	2312	broad.mit.edu	36	1	150554440	150554440	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	150554440	150554440	FLG	1	C	C	A	24
RGS7	6000	broad.mit.edu	36	1	239043642	239043642	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	239043642	239043642	RGS7	1	A	A	T	2
PLXDC2	84898	broad.mit.edu	36	10	20330856	20330856	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	20330856	20330856	PLXDC2	10	C	C	A	30
SYT8	90019	broad.mit.edu	36	11	1815036	1815036	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	1815036	1815036	SYT8	11	G	G	T	46
ACCSL	390110	broad.mit.edu	36	11	44026460	44026460	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	44026460	44026460	ACCSL	11	G	G	A	41
DGKZ	8525	broad.mit.edu	36	11	46344423	46344423	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	46344423	46344423	DGKZ	11	C	C	T	21
PACS1	55690	broad.mit.edu	36	11	65757079	65757079	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	65757079	65757079	PACS1	11	G	G	A	40
ANO1	55107	broad.mit.edu	36	11	69706267	69706267	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	69706267	69706267	ANO1	11	C	C	A	32
KRTAP5-7	440050	broad.mit.edu	36	11	70916252	70916252	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	70916252	70916252	KRTAP5-7	11	C	C	T	28
GDPD5	81544	broad.mit.edu	36	11	74837673	74837673	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	74837673	74837673	GDPD5	11	G	G	C	47
C11orf82	220042	broad.mit.edu	36	11	82303441	82303441	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	82303441	82303441	C11orf82	11	C	C	T	19
EXPH5	23086	broad.mit.edu	36	11	107887170	107887170	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	107887170	107887170	EXPH5	11	G	G	A	33
ATP5G2	517	broad.mit.edu	36	12	52345445	52345445	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	52345445	52345445	ATP5G2	12	C	C	T	27
CRY1	1407	broad.mit.edu	36	12	105919271	105919271	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	105919271	105919271	CRY1	12	C	C	T	29
DNAH10	196385	broad.mit.edu	36	12	122849786	122849786	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	122849786	122849786	DNAH10	12	A	A	G	11
GPR133	283383	broad.mit.edu	36	12	130032443	130032443	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	130032443	130032443	GPR133	12	G	G	A	40
DDX51	317781	broad.mit.edu	36	12	131193236	131193236	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	131193236	131193236	DDX51	12	G	G	T	35
ZNF605	100289635	broad.mit.edu	36	12	132013728	132013728	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	132013728	132013728	ZNF605	12	T	T	C	64
RNF17	56163	broad.mit.edu	36	13	24272504	24272504	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	24272504	24272504	RNF17	13	A	A	T	11
PCDH9	5101	broad.mit.edu	36	13	66103410	66103410	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	66103410	66103410	PCDH9	13	G	G	A	40
DOCK9	23348	broad.mit.edu	36	13	98250647	98250647	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	98250647	98250647	DOCK9	13	C	C	G	29
OR4K13	390433	broad.mit.edu	36	14	19572157	19572157	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	19572157	19572157	OR4K13	14	C	C	A	25
PAK6	56924	broad.mit.edu	36	15	38344471	38344471	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	38344471	38344471	PAK6	15	C	C	A	21
IL4R	3566	broad.mit.edu	36	16	27282455	27282455	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	27282455	27282455	IL4R	16	G	G	A	42
MVP	9961	broad.mit.edu	36	16	29760656	29760656	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	29760656	29760656	MVP	16	G	G	A	37
GAS8	2622	broad.mit.edu	36	16	88631217	88631217	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	88631217	88631217	GAS8	16	G	G	T	38
DNM2	1785	broad.mit.edu	36	19	10758342	10758342	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			C	T	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	10758342	10758342	DNM2	19	C	C	T	31
KCNN1	3780	broad.mit.edu	36	19	17946960	17946960	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	17946960	17946960	KCNN1	19	G	G	T	47
PSG1	5669	broad.mit.edu	36	19	48067936	48067936	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			A	T	A	A	Unknown	Valid	Somatic	x	x	454_PCR_WGA			x	Broad	Missense_Mutation	SNP	48067936	48067936	PSG1	19	A	A	T	15
MITD1	129531	broad.mit.edu	36	2	99152488	99152488	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	99152488	99152488	MITD1	2	A	A	G	8
TTN	7273	broad.mit.edu	36	2	179320284	179320284	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			T	G	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	179320284	179320284	TTN	2	T	T	G	59
DOCK3	1795	broad.mit.edu	36	3	51375143	51375143	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	51375143	51375143	DOCK3	3	G	G	A	37
CCDC52	152185	broad.mit.edu	36	3	114670383	114670383	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	114670383	114670383	CCDC52	3	C	C	T	29
SIDT1	54847	broad.mit.edu	36	3	114809700	114809700	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	114809700	114809700	SIDT1	3	G	G	A	46
ZNF80	7634	broad.mit.edu	36	3	115438209	115438209	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	115438209	115438209	ZNF80	3	A	A	C	6
CD86	942	broad.mit.edu	36	3	123307737	123307737	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			A	C	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	123307737	123307737	CD86	3	A	A	C	13
KIAA1109	84162	broad.mit.edu	36	4	123387334	123387334	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	123387334	123387334	KIAA1109	4	C	C	T	19
TAS2R1	50834	broad.mit.edu	36	5	9682601	9682601	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	9682601	9682601	TAS2R1	5	C	C	A	29
C5orf33	133686	broad.mit.edu	36	5	36233495	36233495	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	36233495	36233495	C5orf33	5	G	G	A	33
PCDHB4	56131	broad.mit.edu	36	5	140483358	140483358	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	140483358	140483358	PCDHB4	5	G	G	A	38
CPLX2	10814	broad.mit.edu	36	5	175239564	175239564	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	175239564	175239564	CPLX2	5	C	C	T	27
TAP2	6891	broad.mit.edu	36	6	32911441	32911441	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			G	T	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	32911441	32911441	TAP2	6	G	G	T	43
TTBK1	84630	broad.mit.edu	36	6	43359650	43359650	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	43359650	43359650	TTBK1	6	C	C	G	19
EPHA7	2045	broad.mit.edu	36	6	94177155	94177155	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			C	A	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	94177155	94177155	EPHA7	6	C	C	A	21
KIAA0415	9907	broad.mit.edu	36	7	4789544	4789544	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	4789544	4789544	KIAA0415	7	G	G	C	35
ZAN	7455	broad.mit.edu	36	7	100202212	100202212	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	100202212	100202212	ZAN	7	C	C	T	28
MLL5	55904	broad.mit.edu	36	7	104540210	104540210	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10			C	G	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	104540210	104540210	MLL5	7	C	C	G	30
PRAGMIN	157285	broad.mit.edu	36	8	8272214	8272214	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	8272214	8272214	PRAGMIN	8	G	G	A	47
ZNF169	169841	broad.mit.edu	36	9	96102301	96102301	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	96102301	96102301	ZNF169	9	C	C	T	19
TP53	7157	broad.mit.edu	36	17	7514720	7514720	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Del	DEL	7514720	7514720	TP53	17	C	C	-	29
KDM5C	8242	broad.mit.edu	36	X	53256378	53256379	+	Frame_Shift_Ins	INS	-	A	-	novel	Unknown	TCGA-24-1434-01	TCGA-24-1434-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Ins	INS	53256378	53256379	KDM5C	23	-	A	-	41
