Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA9	10350	genome.wustl.edu	37	17	67020435	67020435	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	17	67020435	67020435	A	G	SNP	ABCA9	NM_080283.3	human	genbank	58_37c	-1	reviewed	missense	c.2201	p.I734T	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANK1	286	genome.wustl.edu	37	8	41615631	41615631	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	8	41615631	41615631	T	A	SNP	ANK1	NM_001142446.1	human	genbank	58_37c	-1	reviewed	nonsense	c.151	p.R51*	1.000	HMMSmart_ANK,superfamily_ANK	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_ZU5,HMMSmart_ZU5,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_DEATH_like	-	no_errors
ANLN	54443	genome.wustl.edu	37	7	36438976	36438976	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	36438976	36438976	G	C	SNP	ANLN	NM_018685.2	human	genbank	58_37c	+1	validated	missense	c.461	p.R154P	0.990	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
ATP6V1C1	528	genome.wustl.edu	37	8	104078638	104078638	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	8	104078638	104078638	A	G	SNP	ATP6V1C1	NM_001695.4	human	genbank	58_37c	+1	reviewed	missense	c.1016	p.Y339C	1.000	HMMPfam_V-ATPase_C	HMMPfam_V-ATPase_C	-	no_errors
BCHE	590	genome.wustl.edu	37	3	165491226	165491226	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	165491226	165491226	A	T	SNP	BCHE	NM_000055.2	human	genbank	58_37c	-1	reviewed	missense	c.1753	p.W585R	1.000	HMMPfam_AChE_tetra	HMMPfam_COesterase,HMMPfam_AChE_tetra,PatternScan_CARBOXYLESTERASE_B_2,PatternScan_CARBOXYLESTERASE_B_1,superfamily_SSF53474	-	no_errors
CCDC146	57639	genome.wustl.edu	37	7	76889257	76889266	+	Splice_Site	DEL	GTGTGTGTGT	GTGTGTGTGT	-	rs72304549	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	GTGTGTGTGT	GTGTGTGTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	7	76889257	76889266	GTGTGTGTGT	-	DEL	CCDC146	NM_020879.2	human	genbank	58_37c	+1	validated	intronic	c.759-69_759-60	e7-60	0.002:0.003:0.004:0.005:0.005:0.005:0.001:0.000:0.000:0.000	-	-	-	no_errors
CCDC9	26093	genome.wustl.edu	37	19	47769965	47769965	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	19	47769965	47769965	A	T	SNP	CCDC9	NM_015603.2	human	genbank	58_37c	+1	validated	missense	c.818	p.K273M	0.998	NULL	NULL	-	no_errors
CDC42BPA	8476	genome.wustl.edu	37	1	227198691	227198691	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	227198691	227198691	T	C	SNP	CDC42BPA	ENST00000334218	human	ensembl	58_37c	-1	known	missense	c.4826	p.Y1609C	1.000	HMMSmart_PBD	HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
CDC5L	988	genome.wustl.edu	37	6	44360503	44360503	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	6	44360503	44360503	G	A	SNP	CDC5L	NM_001253.2	human	genbank	58_37c	+1	reviewed	silent	c.249	p.R83	1.000	HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_Myb_DNA-binding	HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_Myb_DNA-binding	-	no_errors
CDC7	8317	genome.wustl.edu	37	1	91989621	91989621	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	91989621	91989621	G	C	SNP	CDC7	NM_001134419.1	human	genbank	58_37c	+1	reviewed	missense	c.1354	p.E452Q	1.000	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CDK14	0	genome.wustl.edu	37	7	90741993	90741993	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	90741993	90741993	G	A	SNP	CDK14	NM_012395.2	human	genbank	58_37c	+1	validated	missense	c.1237	p.D413N	0.998	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_CYTOCHROME_B5_1	-	no_errors
CEACAM5	1048	genome.wustl.edu	37	19	42213656	42213656	+	Missense_Mutation	SNP	C	C	G	rs111403501	byCluster;byFrequency	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	42213656	42213656	C	G	SNP	CEACAM5	NM_004363.2	human	genbank	58_37c	+1	validated	missense	c.122	p.T41R	0.000	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
CKMT1B	1159	genome.wustl.edu	37	15	43891108	43891108	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	15	43891108	43891108	T	G	SNP	CKMT1B	NM_020990.3	human	genbank	58_37c	+1	reviewed	silent	c.1095	p.G365	0.226	HMMPfam_ATP-gua_Ptrans,superfamily_SSF55931	HMMPfam_ATP-gua_Ptrans,HMMPfam_ATP-gua_PtransN,PatternScan_GUANIDO_KINASE,superfamily_ATP-gua_Ptrans,superfamily_SSF55931	-	no_errors
COL28A1	340267	genome.wustl.edu	37	7	7571011	7571011	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	7571011	7571011	G	A	SNP	COL28A1	NM_001037763.2	human	genbank	58_37c	-1	validated	missense	c.649	p.P217S	0.048	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like,HMMPfam_Collagen,superfamily_vWA-like	-	no_errors
CORO1C	23603	genome.wustl.edu	37	12	109051186	109051186	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	12	109051186	109051186	G	A	SNP	CORO1C	NM_014325.2	human	genbank	58_37c	-1	reviewed	missense	c.644	p.A215V	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_DUF1899,HMMPfam_DUF1900,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
CXorf66	347487	genome.wustl.edu	37	X	139038828	139038828	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	X	139038828	139038828	A	T	SNP	CXorf66	NM_001013403.2	human	genbank	58_37c	-1	validated	missense	c.313	p.C105S	0.000	NULL	NULL	-	no_errors
CYP4F8	11283	genome.wustl.edu	37	19	15730493	15730493	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	15730493	15730493	C	T	SNP	CYP4F8	ENST00000441682	human	ensembl	58_37c	+1	known	missense	c.445	p.R149C	0.924	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYSLTR1	10800	genome.wustl.edu	37	X	77528443	77528443	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	X	77528443	77528443	A	C	SNP	CYSLTR1	NM_006639.2	human	genbank	58_37c	-1	reviewed	missense	c.801	p.C267W	0.999	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
DCC	1630	genome.wustl.edu	37	18	50976883	50976883	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	18	50976883	50976883	A	T	SNP	DCC	NM_005215.3	human	genbank	58_37c	+1	reviewed	silent	c.3243	p.G1081	0.866	HMMPfam_Neogenin_C	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_Neogenin_C,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DRAM1	55332	genome.wustl.edu	37	12	102302031	102302031	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	12	102302031	102302031	C	G	SNP	DRAM1	NM_018370.2	human	genbank	58_37c	+1	reviewed	missense	c.410	p.T137R	0.972	HMMPfam_Frag1	HMMPfam_Frag1	-	no_errors
DUSP7	1849	genome.wustl.edu	37	3	52088078	52088078	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	52088078	52088078	A	C	SNP	DUSP7	NM_001947.3	human	genbank	58_37c	-1	validated	missense	c.677	p.V226G	1.000	HMMPfam_DSPc,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_DSPc,HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
DYSF	8291	genome.wustl.edu	37	2	71743347	71743347	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	2	71743347	71743347	T	G	SNP	DYSF	NM_001130987.1	human	genbank	58_37c	+1	reviewed	missense	c.926	p.L309R	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,HMMSmart_DysFN,HMMSmart_DysFC,superfamily_C2_CaLB,HMMPfam_FerA,HMMPfam_FerB,HMMPfam_FerI	-	no_errors
ENSG00000246132	0	genome.wustl.edu	37	17	47688914	47688914	+	RNA	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	17	47688914	47688914	C	G	SNP	SPOP	NM_001007226.1	human	genbank	58_37c	-1	reviewed	intronic	c.481-95	e5-95	0.001	-	-	-	no_errors
FAM117B	150864	genome.wustl.edu	37	2	203591010	203591010	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	2	203591010	203591010	A	G	SNP	FAM117B	NM_173511.3	human	genbank	58_37c	+1	validated	missense	c.152	p.H51R	1.000	NULL	NULL	-	no_errors
FAM171A1	221061	genome.wustl.edu	37	10	15255345	15255345	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	10	15255345	15255345	C	A	SNP	FAM171A1	NM_001010924.1	human	genbank	58_37c	-1	validated	nonsense	c.2242	p.E748*	1.000	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FCGBP	8857	genome.wustl.edu	37	19	40392553	40392553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	40392553	40392553	C	T	SNP	FCGBP	NM_003890.2	human	genbank	58_37c	-1	validated	missense	c.7951	p.E2651K	0.100	NULL	HMMSmart_VWC,HMMPfam_VWD,HMMSmart_VWD,superfamily_Cysrich_TIL,HMMPfam_TIL_assoc,HMMSmart_FOLN,HMMPfam_C8,HMMPfam_TIL	-	no_errors
FMO2	2327	genome.wustl.edu	37	1	171174757	171174757	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	171174757	171174757	G	C	SNP	FMO2	NM_001460.2	human	genbank	58_37c	+1	reviewed	silent	c.1167	p.V389	0.065	HMMPfam_FMO-like	HMMPfam_FMO-like,superfamily_SSF51905	-	no_errors
FYB	2533	genome.wustl.edu	37	5	39135064	39135064	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	5	39135064	39135064	T	A	SNP	FYB	NM_001465.3	human	genbank	58_37c	-1	validated	missense	c.1568	p.K523I	1.000	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2,PatternScan_XYLOSE_ISOMERASE_1	-	no_errors
GCC1	79571	genome.wustl.edu	37	7	127222694	127222726	+	In_Frame_Del	DEL	CCAGCTCCTGCCGGTGGAGCTGCTGCAGCCGGG	CCAGCTCCTGCCGGTGGAGCTGCTGCAGCCGGG	-	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	CCAGCTCCTGCCGGTGGAGCTGCTGCAGCCGGG	CCAGCTCCTGCCGGTGGAGCTGCTGCAGCCGGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	7	127222694	127222726	CCAGCTCCTGCCGGTGGAGCTGCTGCAGCCGGG	-	DEL	GCC1	NM_024523.5	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1702_1670	p.ARLQQLHRQEL557in_frame_del	1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.987:0.992:0.998:1.000:1.000:1.000:0.255:0.287:0.293:0.481:0.992:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:0.988:0.992:0.988:0.993	NULL	HMMPfam_GRIP,HMMSmart_SM00755	-	no_errors
GLG1	2734	genome.wustl.edu	37	16	74514249	74514249	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	16	74514249	74514249	G	C	SNP	GLG1	NM_012201.5	human	genbank	58_37c	-1	validated	missense	c.1717	p.R573G	1.000	HMMPfam_Cys_rich_FGFR	HMMPfam_Cys_rich_FGFR	-	no_errors
GRK1	6011	genome.wustl.edu	37	13	114325966	114325966	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	13	114325966	114325966	A	C	SNP	GRK1	ENST00000335678	human	ensembl	58_37c	+1	known	missense	c.980	p.N327T	0.989	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMPfam_RGS,HMMSmart_RGS,HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_Regulat_G_prot_signal_superfam,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
HCLS1	3059	genome.wustl.edu	37	3	121361820	121361820	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	121361820	121361820	G	A	SNP	HCLS1	NM_005335.4	human	genbank	58_37c	-1	validated	silent	c.408	p.V136	0.999	HMMPfam_HS1_rep	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_HS1_rep	-	no_errors
HECW1	23072	genome.wustl.edu	37	7	43546850	43546850	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	43546850	43546850	A	T	SNP	HECW1	NM_015052.3	human	genbank	58_37c	+1	validated	missense	c.3746	p.K1249I	1.000	superfamily_HECT	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-	no_errors
HTR3E	285242	genome.wustl.edu	37	3	183823579	183823579	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	183823579	183823579	C	A	SNP	HTR3E	NM_182589.2	human	genbank	58_37c	+1	reviewed	silent	c.792	p.L264	0.903	superfamily_Neu_channel_TM	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors
HYDIN	54768	genome.wustl.edu	37	16	71052178	71052178	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	16	71052178	71052178	G	T	SNP	HYDIN	NM_032821.2	human	genbank	58_37c	-1	validated	missense	c.3498	p.N1166K	1.000	NULL	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
IGHMBP2	3508	genome.wustl.edu	37	11	68678969	68678969	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	68678969	68678969	G	A	SNP	IGHMBP2	NM_002180.2	human	genbank	58_37c	+1	reviewed	silent	c.609	p.A203	0.012	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00154,HMMPfam_R3H,HMMSmart_SM00393,HMMSmart_SM00382,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_R3H domain	-	no_errors
IMPDH2	3615	genome.wustl.edu	37	3	49062341	49062341	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	49062341	49062341	T	C	SNP	IMPDH2	NM_000884.2	human	genbank	58_37c	-1	reviewed	missense	c.1283	p.N428S	0.998	HMMPfam_IMPDH,superfamily_SSF51412	HMMPfam_CBS,HMMSmart_CBS,HMMPfam_IMPDH,PatternScan_IMP_DH_GMP_RED,superfamily_SSF51412,superfamily_SSF54631	-	no_errors
IPP	3652	genome.wustl.edu	37	1	46206690	46206690	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	46206690	46206690	C	A	SNP	IPP	NM_005897.2	human	genbank	58_37c	-1	reviewed	missense	c.607	p.A203S	1.000	HMMPfam_BACK	HMMSmart_SM00225,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
ISM2	145501	genome.wustl.edu	37	14	77950743	77950743	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	14	77950743	77950743	T	A	SNP	ISM2	NM_199296.2	human	genbank	58_37c	-1	reviewed	missense	c.550	p.T184S	0.000	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_AMOP,HMMSmart_SM00723	-	no_errors
ITGAX	3687	genome.wustl.edu	37	16	31373464	31373464	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	16	31373464	31373464	T	A	SNP	ITGAX	NM_000887.3	human	genbank	58_37c	+1	reviewed	missense	c.1155	p.N385K	0.000	superfamily_SSF69318	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_Int_alpha,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_SSF53300,superfamily_SSF69179,superfamily_SSF69318	-	no_errors
KDM5B	10765	genome.wustl.edu	37	1	202722080	202722080	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	202722080	202722080	G	C	SNP	KDM5B	NM_006618.3	human	genbank	58_37c	-1	validated	missense	c.1654	p.L552V	1.000	HMMSmart_SM00558,HMMPfam_JmjC	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like,HMMSmart_SM00249,HMMSmart_SM00558,HMMPfam_JmjN,HMMSmart_SM00545,HMMPfam_zf-C5HC2,superfamily_FYVE/PHD zinc finger,HMMPfam_JmjC,HMMPfam_PLU-1,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
KIF17	57576	genome.wustl.edu	37	1	20991082	20991082	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	20991082	20991082	G	C	SNP	KIF17	NM_020816.2	human	genbank	58_37c	-1	validated	missense	c.3085	p.L1029V	1.000	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LDB2	9079	genome.wustl.edu	37	4	16587601	16587601	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	4	16587601	16587601	G	T	SNP	LDB2	NM_001290.3	human	genbank	58_37c	-1	validated	missense	c.559	p.L187M	1.000	HMMPfam_LIM_bind	HMMPfam_LIM_bind	-	no_errors
LHCGR	3973	genome.wustl.edu	37	2	48958413	48958413	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	2	48958413	48958413	T	G	SNP	LHCGR	NM_000233.3	human	genbank	58_37c	-1	reviewed	missense	c.186	p.K62N	1.000	superfamily_L domain-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like	-	no_errors
LOC100129138	0	genome.wustl.edu	37	1	104615935	104615935	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	1	104615935	104615935	G	A	SNP	LOC100129138	XR_036957.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.019	-	-	-	no_errors
LOC121456	121456	genome.wustl.edu	37	12	98850204	98850225	+	RNA	DEL	TTCACCATACCATACCTGAGAT	TTCACCATACCATACCTGAGAT	-	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	TTCACCATACCATACCTGAGAT	TTCACCATACCATACCTGAGAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	12	98850204	98850225	TTCACCATACCATACCTGAGAT	-	DEL	LOC121456	XR_016411.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000:1.000:1.000:0.999:0.990:0.936:0.923:0.916:0.923:0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	no_errors
LOC653720	653720	genome.wustl.edu	37	15	28947125	28947125	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	15	28947125	28947125	G	-	DEL	LOC653720	XM_001724258.2	human	genbank	58_37c	-1	model	frame_shift_del	c.1874	p.A625fs	0.006	NULL	NULL	-	no_errors
MAPK4	5596	genome.wustl.edu	37	18	48252421	48252421	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	18	48252421	48252421	T	A	SNP	MAPK4	NM_002747.3	human	genbank	58_37c	+1	reviewed	missense	c.943	p.Y315N	0.997	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAVS	57506	genome.wustl.edu	37	20	3846668	3846668	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	20	3846668	3846668	G	C	SNP	MAVS	NM_020746.3	human	genbank	58_37c	+1	validated	silent	c.1497	p.R499	0.000	NULL	NULL	-	no_errors
MGAT4A	11320	genome.wustl.edu	37	2	99279578	99279578	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	2	99279578	99279578	A	C	SNP	MGAT4A	NM_012214.2	human	genbank	58_37c	-1	reviewed	silent	c.468	p.L156	0.999	HMMPfam_Glyco_transf_54	HMMPfam_Glyco_transf_54	-	no_errors
MTMR4	9110	genome.wustl.edu	37	17	56581186	56581186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	17	56581186	56581186	C	T	SNP	MTMR4	NM_004687.4	human	genbank	58_37c	-1	validated	missense	c.1730	p.C577Y	1.000	NULL	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_Myotub-related,superfamily_FYVE/PHD zinc finger,PatternScan_TYR_PHOSPHATASE_1,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
MYCT1	80177	genome.wustl.edu	37	6	153043116	153043116	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	6	153043116	153043116	C	T	SNP	MYCT1	NM_025107.2	human	genbank	58_37c	+1	validated	nonsense	c.436	p.R146*	0.999	NULL	NULL	-	no_errors
MYH15	22989	genome.wustl.edu	37	3	108158716	108158716	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	108158716	108158716	G	T	SNP	MYH15	NM_014981.1	human	genbank	58_37c	-1	validated	silent	c.3003	p.I1001	0.004	superfamily_Prefoldin	HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NARS2	79731	genome.wustl.edu	37	11	78189715	78189715	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	78189715	78189715	C	G	SNP	NARS2	NM_024678.4	human	genbank	58_37c	-1	validated	silent	c.837	p.L279	0.917	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	HMMPfam_tRNA-synt_2,HMMPfam_tRNA_anti,superfamily_Nucleic acid-binding proteins,superfamily_Class II aaRS and biotin synthetases	-	no_errors
NCEH1	57552	genome.wustl.edu	37	3	172428805	172428805	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	172428805	172428805	G	C	SNP	NCEH1	NM_020792.4	human	genbank	58_37c	-1	validated	missense	c.66	p.C22W	0.000	NULL	PatternScan_LIPASE_GDXG_SER,HMMPfam_Abhydrolase_3,superfamily_alpha/beta-Hydrolases	-	no_errors
NOL6	65083	genome.wustl.edu	37	9	33464968	33464968	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	9	33464968	33464968	G	A	SNP	NOL6	NM_022917.4	human	genbank	58_37c	-1	reviewed	silent	c.2688	p.P896	0.921	HMMPfam_Nrap	HMMPfam_Nrap	-	no_errors
NPPA	4878	genome.wustl.edu	37	1	11907684	11907684	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	1	11907684	11907684	G	C	SNP	NPPA	NM_006172.3	human	genbank	58_37c	-1	reviewed	missense	c.58	p.L20V	0.123	NULL	HMMPfam_ANP,HMMSmart_NAT_PEP,PatternScan_NATRIURETIC_PEPTIDE	-	no_errors
ONECUT2	9480	genome.wustl.edu	37	18	55143875	55143875	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	18	55143875	55143875	C	T	SNP	ONECUT2	NM_004852.2	human	genbank	58_37c	+1	reviewed	missense	c.1435	p.R479C	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_CUT,superfamily_Homeodomain-like	-	no_errors
OR2G6	391211	genome.wustl.edu	37	1	248685865	248685865	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	248685865	248685865	G	T	SNP	OR2G6	NM_001013355.1	human	genbank	58_37c	+1	validated	silent	c.918	p.L306	0.000	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR2T3	343173	genome.wustl.edu	37	1	248637179	248637179	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	248637179	248637179	T	A	SNP	OR2T3	NM_001005495.1	human	genbank	58_37c	+1	provisional	silent	c.528	p.S176	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5T1	390155	genome.wustl.edu	37	11	56043581	56043581	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	56043581	56043581	T	A	SNP	OR5T1	NM_001004745.1	human	genbank	58_37c	+1	provisional	missense	c.467	p.L156H	0.005	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR6K6	128371	genome.wustl.edu	37	1	158724637	158724637	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	1	158724637	158724637	C	G	SNP	OR6K6	NM_001005184.1	human	genbank	58_37c	+1	provisional	missense	c.32	p.S11C	0.000	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PCDHB2	56133	genome.wustl.edu	37	5	140476160	140476160	+	Missense_Mutation	SNP	G	G	A	rs77771848	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	5	140476160	140476160	G	A	SNP	PCDHB2	NM_018936.2	human	genbank	58_37c	+1	reviewed	missense	c.1786	p.G596S	0.997	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PHLDB1	23187	genome.wustl.edu	37	11	118498674	118498674	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	118498674	118498674	C	T	SNP	PHLDB1	NM_001144758.1	human	genbank	58_37c	+1	validated	missense	c.1135	p.P379S	1.000	NULL	HMMPfam_FHA,HMMPfam_PH,HMMSmart_SM00233,superfamily_SMAD/FHA domain,superfamily_PH domain-like	-	no_errors
PIGG	54872	genome.wustl.edu	37	4	502620	502620	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	4	502620	502620	G	C	SNP	PIGG	NM_001127178.1	human	genbank	58_37c	+1	validated	missense	c.762	p.E254D	0.933	superfamily_Alkaline phosphatase-like	superfamily_Alkaline phosphatase-like	-	no_errors
PIK3C2G	5288	genome.wustl.edu	37	12	18644449	18644449	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	12	18644449	18644449	T	A	SNP	PIK3C2G	NM_004570.4	human	genbank	58_37c	+1	reviewed	missense	c.2627	p.L876H	0.998	superfamily_Protein kinase-like (PK-like)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_PI3Ka,HMMSmart_SM00145,HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,HMMPfam_PI3K_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_Ubiquitin-like	-	no_errors
PRKAG2	51422	genome.wustl.edu	37	7	151265913	151265913	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	151265913	151265913	T	C	SNP	PRKAG2	NM_016203.3	human	genbank	58_37c	-1	reviewed	silent	c.1122	p.V374	0.995	HMMPfam_CBS,HMMSmart_SM00116,superfamily_CBS-domain	HMMPfam_CBS,HMMSmart_SM00116,superfamily_CBS-domain	-	no_errors
PTPRZ1	5803	genome.wustl.edu	37	7	121695092	121695092	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	121695092	121695092	C	G	SNP	PTPRZ1	NM_002851.2	human	genbank	58_37c	+1	reviewed	missense	c.6479	p.S2160C	0.998	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
QPCTL	54814	genome.wustl.edu	37	19	46196814	46196814	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	46196814	46196814	G	A	SNP	QPCTL	NM_017659.3	human	genbank	58_37c	+1	validated	silent	c.351	p.K117	1.000	superfamily_SSF53187	HMMPfam_Peptidase_M28,superfamily_SSF53187	-	no_errors
RAI1	10743	genome.wustl.edu	37	17	17697094	17697105	+	In_Frame_Del	DEL	CAGCAGCAGCAG	CAGCAGCAGCAG	-	rs35068024	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	CAGCAGCAGCAG	CAGCAGCAGCAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	17	17697094	17697105	CAGCAGCAGCAG	-	DEL	RAI1	NM_030665.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.832_843	p.QQQQ281in_frame_del	0.831:0.157:0.050:0.791:0.897:0.891:0.907:0.973:0.993:1.000:1.000:1.000	NULL	HMMSmart_SM00249	-	no_errors
RASL11B	65997	genome.wustl.edu	37	4	53731706	53731706	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	4	53731706	53731706	C	G	SNP	RASL11B	NM_023940.2	human	genbank	58_37c	+1	provisional	missense	c.481	p.Q161E	1.000	superfamily_SSF52540	HMMPfam_Miro,superfamily_SSF52540	-	no_errors
RFX1	5989	genome.wustl.edu	37	19	14076329	14076329	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	14076329	14076329	C	G	SNP	RFX1	NM_002918.4	human	genbank	58_37c	-1	validated	missense	c.2143	p.A715P	1.000	NULL	"HMMPfam_RFX_DNA_binding,HMMPfam_RFX1_trans_act,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
RTN4RL1	146760	genome.wustl.edu	37	17	1840864	1840864	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	17	1840864	1840864	G	C	SNP	RTN4RL1	NM_178568.2	human	genbank	58_37c	-1	validated	nonsense	c.252	p.Y84*	1.000	HMMSmart_SM00369,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
SALL1	6299	genome.wustl.edu	37	16	51172798	51172798	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	16	51172798	51172798	G	-	DEL	SALL1	NM_002968.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.3335	p.P1112fs	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
SALL1	6299	genome.wustl.edu	37	16	51172800	51172800	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	16	51172800	51172800	C	T	SNP	SALL1	NM_002968.2	human	genbank	58_37c	-1	reviewed	silent	c.3333	p.G1111	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
SATL1	340562	genome.wustl.edu	37	X	84349172	84349172	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	X	84349172	84349172	A	T	SNP	SATL1	NM_001012980.2	human	genbank	58_37c	-1	validated	missense	c.1277	p.L426H	1.000	superfamily_Acyl_CoA_acyltransferase	superfamily_Acyl_CoA_acyltransferase	-	no_errors
SLC26A3	1811	genome.wustl.edu	37	7	107427288	107427288	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	107427288	107427288	C	A	SNP	SLC26A3	NM_000111.2	human	genbank	58_37c	-1	reviewed	missense	c.955	p.G319W	1.000	HMMPfam_Sulfate_transp	HMMPfam_STAS,superfamily_STAS,HMMPfam_Sulfate_transp,PatternScan_SLC26A	-	no_errors
SLC27A3	11000	genome.wustl.edu	37	1	153748207	153748207	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	1	153748207	153748207	C	-	DEL	SLC27A3	NM_024330.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.375	p.A126fs	0.002	superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
SMTNL1	219537	genome.wustl.edu	37	11	57314020	57314020	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	57314020	57314020	C	A	SNP	SMTNL1	NM_001105565.1	human	genbank	58_37c	+1	provisional	missense	c.1289	p.A430D	1.000	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	-	no_errors
SPATA16	83893	genome.wustl.edu	37	3	172835390	172835390	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	3	172835390	172835390	T	A	SNP	SPATA16	NM_031955.5	human	genbank	58_37c	-1	reviewed	silent	c.132	p.S44	0.000	NULL	superfamily_TPR-like	-	no_errors
SRRT	51593	genome.wustl.edu	37	7	100479395	100479395	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	7	100479395	100479395	A	T	SNP	SRRT	NM_015908.5	human	genbank	58_37c	+1	validated	missense	c.367	p.M123L	1.000	NULL	HMMPfam_ARS2	-	no_errors
STRN4	29888	genome.wustl.edu	37	19	47240084	47240084	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	47240084	47240084	G	A	SNP	STRN4	NM_001039877.1	human	genbank	58_37c	-1	validated	nonsense	c.535	p.R179*	1.000	HMMPfam_Striatin	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_Striatin,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
SYNPO2	171024	genome.wustl.edu	37	4	119948056	119948056	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	4	119948056	119948056	G	A	SNP	SYNPO2	NM_133477.2	human	genbank	58_37c	+1	validated	missense	c.532	p.V178M	0.000	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
TBC1D25	4943	genome.wustl.edu	37	X	48418941	48418941	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	X	48418941	48418941	C	G	SNP	TBC1D25	NM_002536.2	human	genbank	58_37c	+1	validated	missense	c.1645	p.P549A	0.157	superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors
TMEM143	55260	genome.wustl.edu	37	19	48848500	48848500	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	48848500	48848500	G	A	SNP	TMEM143	NM_018273.2	human	genbank	58_37c	-1	provisional	silent	c.481	p.L161	1.000	NULL	NULL	-	no_errors
TMIGD2	126259	genome.wustl.edu	37	19	4298081	4298081	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	4298081	4298081	C	A	SNP	TMIGD2	NM_144615.2	human	genbank	58_37c	-1	validated	missense	c.308	p.S103I	0.000	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,superfamily_Immunoglobulin	-	no_errors
TNC	3371	genome.wustl.edu	37	9	117798505	117798505	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	9	117798505	117798505	C	T	SNP	TNC	NM_002160.2	human	genbank	58_37c	-1	validated	missense	c.5528	p.R1843H	0.534	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	HMMPfam_Fibrinogen_C,HMMSmart_FBG,superfamily_Fibrinogen_a/b/g_C,HMMPfam_fn3,HMMSmart_FN3,HMMPfam_EGF,HMMSmart_EGF,superfamily_FN_III-like,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578467	7578467	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	17	7578467	7578467	T	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.463	p.T155P	0.003	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TREH	11181	genome.wustl.edu	37	11	118533617	118533617	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	118533617	118533617	A	T	SNP	TREH	ENST00000264029	human	ensembl	58_37c	-1	known	missense	c.396	p.H132Q	0.943	HMMPfam_Trehalase,superfamily_Six-hairpin glycosidases	HMMPfam_Trehalase,superfamily_Six-hairpin glycosidases,PatternScan_TREHALASE_1,PatternScan_TREHALASE_2	-	no_errors
TRERF1	55809	genome.wustl.edu	37	6	42224823	42224823	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	6	42224823	42224823	A	T	SNP	TRERF1	NM_033502.2	human	genbank	58_37c	-1	reviewed	nonsense	c.2354	p.L785*	0.997	HMMPfam_ELM2	HMMPfam_ELM2,HMMSmart_SM00717,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
TRIM46	80128	genome.wustl.edu	37	1	155152365	155152365	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-11A-21W-A100-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	4c81cd23-413c-45a2-bd6e-73212e75ab8c	1	155152365	155152365	G	T	SNP	TRIM46	NM_025058.3	human	genbank	58_37c	+1	validated	missense	c.1543	p.G515C	1.000	HMMPfam_fn3,superfamily_Fibronectin type III	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_fn3,superfamily_Fibronectin type III,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_B-box zinc-binding domain,superfamily_RING/U-box	-	no_errors
TRPV2	51393	genome.wustl.edu	37	17	16335509	16335509	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	17	16335509	16335509	C	A	SNP	TRPV2	NM_016113.3	human	genbank	58_37c	+1	reviewed	silent	c.1884	p.A628	0.712	HMMPfam_Ion_trans	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_Ion_trans	-	no_errors
TSHZ3	57616	genome.wustl.edu	37	19	31767507	31767507	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	19	31767507	31767507	G	A	SNP	TSHZ3	NM_020856.2	human	genbank	58_37c	-1	validated	silent	c.3192	p.H1064	0.998	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179641483	179641483	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	2	179641483	179641483	G	A	SNP	TTN	NM_133379.3	human	genbank	58_37c	-1	reviewed	missense	c.5108	p.P1703L	1.000	HMMPfam_I-set,superfamily_SSF48726	PatternScan_THIOL_PROTEASE_HIS,PatternScan_IG_MHC,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,superfamily_SSF48726	-	no_errors
VCAN	1462	genome.wustl.edu	37	5	82843850	82843850	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	5	82843850	82843850	A	C	SNP	VCAN	NM_004385.4	human	genbank	58_37c	+1	reviewed	missense	c.9440	p.N3147T	0.991	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMSmart_SM00179,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_V-set,superfamily_Complement control module/SCR domain,superfamily_C-type lectin-like,PatternScan_EGF_CA,PatternScan_C_TYPE_LECTIN_1,superfamily_Immunoglobulin,superfamily_EGF/Laminin	-	no_errors
ZFPL1	7542	genome.wustl.edu	37	11	64853916	64853916	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	11	64853916	64853916	C	T	SNP	ZFPL1	NM_006782.3	human	genbank	58_37c	+1	validated	missense	c.244	p.R82C	1.000	HMMSmart_RING	HMMSmart_RING,PatternScan_ZF_RING_1	-	no_errors
ZZEF1	23140	genome.wustl.edu	37	17	3954156	3954156	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A0CE-01A-11W-A019-09	TCGA-A7-A0CE-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e8c1bd4a-69aa-4496-96d0-d580d1ccc04c	40f1c52b-2063-4541-8600-865735b708b0	17	3954156	3954156	T	C	SNP	ZZEF1	NM_015113.3	human	genbank	58_37c	-1	validated	missense	c.5782	p.T1928A	0.103	NULL	HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,superfamily_Spermadhesin CUB domain,HMMSmart_SM00054,HMMPfam_APC10,superfamily_Galactose-binding domain-like,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
