Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC5	0	genome.wustl.edu	37	3	183643468	183643468	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	183643468	183643468	C	G	SNP	ABCC5	NM_005688.2	human	genbank	58_37c	-1	reviewed	missense	c.4087	p.E1363Q	1.000	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACAD8	0	genome.wustl.edu	37	11	134131253	134131253	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	134131253	134131253	T	C	SNP	ACAD8	NM_014384.2	human	genbank	58_37c	+1	reviewed	missense	c.926	p.L309P	1.000	HMMPfam_Acyl-CoA_dh_1,superfamily_AcylCoADH_C_like	PatternScan_ACYL_COA_DH_1,PatternScan_ACYL_COA_DH_2,HMMPfam_Acyl-CoA_dh_1,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_N,superfamily_AcylCoADH_C_like,superfamily_AcylCoA_dehyd_NM	-	no_errors
ANGEL2	0	genome.wustl.edu	37	1	213178661	213178661	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	213178661	213178661	C	A	SNP	ANGEL2	NM_144567.3	human	genbank	58_37c	-1	validated	missense	c.848	p.R283I	1.000	HMMPfam_Exo_endo_phos,superfamily_DNase I-like	HMMPfam_Exo_endo_phos,superfamily_DNase I-like	-	no_errors
ANKRD11	0	genome.wustl.edu	37	16	89349778	89349778	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	16	89349778	89349778	C	G	SNP	ANKRD11	NM_013275.4	human	genbank	58_37c	-1	validated	missense	c.3172	p.E1058Q	1.000	superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
C10orf140	0	genome.wustl.edu	37	10	21805466	21805467	+	In_Frame_Ins	INS	-	-	CCTCCT	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	10	21805466	21805467	-	CCTCCT	INS	C10orf140	NM_207371.3	human	genbank	58_37c	-1	validated	in_frame_ins	c.1286_1285	p.429in_frame_insEE	0.998:1.000	NULL	PatternScan_G_PROTEIN_RECEP_F1_1,HMMPfam_Ski_Sno,superfamily_Putative DNA-binding domain	-	no_errors
C3orf67	0	genome.wustl.edu	37	3	58849603	58849603	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	58849603	58849603	G	A	SNP	C3orf67	NM_198463.2	human	genbank	58_37c	-1	validated	missense	c.899	p.P300L	1.000	NULL	NULL	-	no_errors
CACNA1F	0	genome.wustl.edu	37	X	49071972	49071972	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	X	49071972	49071972	C	T	SNP	CACNA1F	NM_005183.2	human	genbank	58_37c	-1	reviewed	missense	c.3301	p.E1101K	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CACNB1	0	genome.wustl.edu	37	17	37331819	37331819	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	17	37331819	37331819	G	A	SNP	CACNB1	NM_000723.3	human	genbank	58_37c	-1	reviewed	missense	c.1424	p.P475L	0.999	NULL	HMMPfam_Ca_channel_B,HMMPfam_SH3_1,superfamily_SH3-domain,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CANX	0	genome.wustl.edu	37	5	179149818	179149818	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	5	179149818	179149818	C	T	SNP	CANX	NM_001024649.1	human	genbank	58_37c	+1	reviewed	missense	c.1196	p.P399L	1.000	HMMPfam_Calreticulin,superfamily_P-domain of calnexin/calreticulin	HMMPfam_Calreticulin,superfamily_Concanavalin A-like lectins/glucanases,superfamily_P-domain of calnexin/calreticulin,PatternScan_CALRETICULIN_1,PatternScan_CALRETICULIN_2,PatternScan_CALRETICULIN_REPEAT	-	no_errors
CARD9	0	genome.wustl.edu	37	9	139259656	139259656	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	9	139259656	139259656	G	A	SNP	CARD9	NM_052813.4	human	genbank	58_37c	-1	reviewed	silent	c.1371	p.G457	0.000	NULL	HMMPfam_CARD,superfamily_DEATH domain	-	no_errors
CASP8AP2	0	genome.wustl.edu	37	6	90573973	90573973	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	6	90573973	90573973	C	T	SNP	CASP8AP2	NM_001137667.1	human	genbank	58_37c	+1	reviewed	missense	c.2545	p.H849Y	0.998	NULL	superfamily_Homeodomain-like	-	no_stop_codon:bad_bp_length_for_coding_region
CCDC90A	0	genome.wustl.edu	37	6	13791083	13791083	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	6	13791083	13791083	C	T	SNP	CCDC90A	NM_001031713.2	human	genbank	58_37c	-1	validated	silent	c.1038	p.T346	0.970	HMMPfam_DUF1640	HMMPfam_DUF1640	-	no_errors
CCDC99	0	genome.wustl.edu	37	5	169018164	169018164	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	5	169018164	169018164	T	A	SNP	CCDC99	NM_017785.4	human	genbank	58_37c	+1	validated	missense	c.272	p.L91Q	0.969	NULL	NULL	-	no_errors
CNTD1	0	genome.wustl.edu	37	17	40951117	40951117	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	17	40951117	40951117	C	T	SNP	CNTD1	NM_173478.2	human	genbank	58_37c	+1	validated	missense	c.32	p.S11F	0.001	NULL	superfamily_Cyclin-like	-	no_errors
CPXCR1	0	genome.wustl.edu	37	X	88008722	88008722	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	X	88008722	88008722	C	T	SNP	CPXCR1	NM_033048.5	human	genbank	58_37c	+1	validated	missense	c.307	p.H103Y	0.001	NULL	HMMSmart_ZnF_C2H2	-	no_errors
CRYBG3	0	genome.wustl.edu	37	3	97596567	97596567	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	97596567	97596567	G	A	SNP	CRYBG3	NM_153605.2	human	genbank	58_37c	+1	validated	missense	c.685	p.D229N	0.022	NULL	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Crystall,HMMSmart_SM00247,superfamily_Ricin B-like lectins,superfamily_gamma-Crystallin-like	-	no_errors
DDX11L8	0	genome.wustl.edu	37	12	9456739	9456739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	12	9456739	9456739	C	T	SNP	DDX11L8	ENST00000341155	human	ensembl	58_37c	+1	known	missense	c.1424	p.T475M	0.984	NULL	HMMSmart_SM00488,HMMSmart_SM00491,HMMPfam_DEAD_2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DENND2C	0	genome.wustl.edu	37	1	115130504	115130504	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	115130504	115130504	G	C	SNP	DENND2C	NM_198459.3	human	genbank	58_37c	-1	validated	missense	c.2330	p.S777C	1.000	HMMPfam_dDENN,HMMSmart_dDENN	HMMPfam_DENN,HMMSmart_DENN,HMMPfam_dDENN,HMMSmart_dDENN,HMMPfam_uDENN,HMMSmart_uDENN	-	no_errors
EDNRB	0	genome.wustl.edu	37	13	78492504	78492504	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	13	78492504	78492504	C	T	SNP	EDNRB	NM_000115.2	human	genbank	58_37c	-1	reviewed	missense	c.205	p.A69T	0.003	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
EIF4G2	0	genome.wustl.edu	37	11	10824832	10824832	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	10824832	10824832	C	A	SNP	EIF4G2	ENST00000429377	human	ensembl	58_37c	-1	known	missense	c.1042	p.D348Y	1.000	HMMPfam_MIF4G,HMMSmart_MIF4G,superfamily_ARM-type_fold	HMMPfam_W2,HMMSmart_eIF5C,HMMPfam_MIF4G,HMMSmart_MIF4G,HMMPfam_MA3,HMMSmart_MA3,superfamily_ARM-type_fold	-	no_errors
ENSG00000173213	0	genome.wustl.edu	37	18	49169	49169	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	18	49169	49169	C	T	SNP	ENSG00000173213	ENST00000308911	human	ensembl	58_37c	-1	known	silent	c.126	p.L42	1.000	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ	HMMPfam_Tubulin,superfamily_Tub_FtsZ_C,PatternScan_TUBULIN_B_AUTOREG,PatternScan_TUBULIN,HMMPfam_Tubulin_C,superfamily_Tubulin_FtsZ	-	no_errors
ENSG00000231520	0	genome.wustl.edu	37	10	42380256	42380256	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	10	42380256	42380256	T	C	SNP	ENSG00000231520	ENST00000429113	human	ensembl	58_37c	-1	known	silent	c.6	p.E2	0.000	NULL	NULL	-	no_stop_codon
ENSG00000251143	0	genome.wustl.edu	37	11	71728909	71728914	+	RNA	DEL	GTCAAC	GTCAAC	-	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	GTCAAC	GTCAAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	71728909	71728914	GTCAAC	-	DEL	ENSG00000251143	ENST00000502284	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors
F5	0	genome.wustl.edu	37	1	169509917	169509917	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	169509917	169509917	G	C	SNP	F5	NM_000130.4	human	genbank	58_37c	-1	reviewed	missense	c.4411	p.Q1471E	0.106	NULL	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,PatternScan_FA58C_2,PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxins,superfamily_Galactose-binding domain-like,HMMPfam_LSPR,HMMPfam_Cu-oxidase_3	-	no_errors
FAM160A2	0	genome.wustl.edu	37	11	6235673	6235673	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	6235673	6235673	G	A	SNP	FAM160A2	NM_032127.3	human	genbank	58_37c	-1	validated	missense	c.2567	p.A856V	0.983	NULL	HMMPfam_RAI16-like	-	no_errors
FAM184A	0	genome.wustl.edu	37	6	119327762	119327762	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	6	119327762	119327762	G	C	SNP	FAM184A	NM_024581.4	human	genbank	58_37c	-1	validated	silent	c.1665	p.L555	1.000	NULL	NULL	-	no_errors
FAM193A	0	genome.wustl.edu	37	4	2691340	2691340	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	4	2691340	2691340	G	C	SNP	FAM193A	NM_003704.3	human	genbank	58_37c	+1	validated	missense	c.1566	p.W522C	1.000	NULL	NULL	-	no_errors
FAM75A3	0	genome.wustl.edu	37	9	40705911	40705912	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	9	40705911	40705912	-	A	INS	FAM75A3	NM_001083124.1	human	genbank	58_37c	+1	predicted	frame_shift_ins	c.3568_3569	p.T1192fs	0.000:0.001	NULL	NULL	-	no_errors
FAM84B	0	genome.wustl.edu	37	8	127568930	127568930	+	Silent	SNP	C	G	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	8	127568930	127568930	C	G	SNP	FAM84B	NM_174911.3	human	genbank	58_37c	-1	provisional	silent	c.705	p.S235	0.363	NULL	NULL	-	no_errors
FANCE	0	genome.wustl.edu	37	6	35423762	35423762	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	6	35423762	35423762	C	G	SNP	FANCE	NM_021922.2	human	genbank	58_37c	+1	reviewed	missense	c.487	p.Q163E	0.664	NULL	NULL	-	no_errors
GNA14	0	genome.wustl.edu	37	9	80049397	80049397	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	9	80049397	80049397	G	C	SNP	GNA14	NM_004297.3	human	genbank	58_37c	-1	reviewed	silent	c.351	p.V117	0.007	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
GSDMC	0	genome.wustl.edu	37	8	130774954	130774954	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	8	130774954	130774954	G	C	SNP	GSDMC	NM_031415.2	human	genbank	58_37c	-1	validated	silent	c.594	p.L198	0.000	HMMPfam_Gasdermin	HMMPfam_Gasdermin	-	no_errors
HERC2	0	genome.wustl.edu	37	15	28419587	28419587	+	Silent	SNP	G	G	A	rs142399136	byFrequency	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	15	28419587	28419587	G	A	SNP	HERC2	NM_004667.4	human	genbank	58_37c	-1	reviewed	silent	c.10011	p.P3337	0.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_Cyt-b5,superfamily_Cytochrome b5-like heme/steroid binding domain,HMMSmart_SM00706,superfamily_Galactose-binding domain-like,superfamily_RCC1/BLIP-II,HMMPfam_MIB_HERC2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
IGHV3OR16-8	0	genome.wustl.edu	37	16	33647541	33647541	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	16	33647541	33647541	T	G	SNP	IGHV3OR16-8	ENST00000438532	human	ensembl	58_37c	-1	known	missense	c.59	p.E20A	0.996	HMMPfam_V-set	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon
IL1F7	0	genome.wustl.edu	37	2	113675354	113675354	+	Missense_Mutation	SNP	G	G	T	rs138939950	byFrequency	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	2	113675354	113675354	G	T	SNP	IL1F7	NM_014439.3	human	genbank	58_37c	+1	reviewed	missense	c.408	p.K136N	1.000	HMMSmart_SM00125,superfamily_Cytokine	HMMPfam_IL1,HMMSmart_SM00125,superfamily_Cytokine	-	no_errors
KCTD13	0	genome.wustl.edu	37	16	29937272	29937272	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	16	29937272	29937272	G	A	SNP	KCTD13	NM_178863.2	human	genbank	58_37c	-1	provisional	missense	c.83	p.P28L	0.623	NULL	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain	-	no_errors
KIAA1217	0	genome.wustl.edu	37	10	24508619	24508619	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	10	24508619	24508619	A	G	SNP	KIAA1217	NM_019590.3	human	genbank	58_37c	+1	validated	silent	c.135	p.E45	0.427	NULL	NULL	-	no_errors
KIAA1328	0	genome.wustl.edu	37	18	34415224	34415224	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	18	34415224	34415224	C	G	SNP	KIAA1328	NM_020776.1	human	genbank	58_37c	+1	validated	nonsense	c.122	p.S41*	0.992	NULL	NULL	-	no_errors
KLB	0	genome.wustl.edu	37	4	39439551	39439551	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	4	39439551	39439551	C	T	SNP	KLB	NM_175737.3	human	genbank	58_37c	+1	validated	missense	c.1541	p.T514M	0.988	NULL	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat,PatternScan_GLYCOSYL_HYDROL_F1_1,PatternScan_GLYCOSYL_HYDROL_F1_2	-	no_errors
KRTAP5-5	0	genome.wustl.edu	37	11	1651178	1651178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	1651178	1651178	G	A	SNP	KRTAP5-5	NM_001001480.2	human	genbank	58_37c	+1	validated	silent	c.108	p.G36	0.998	NULL	PatternScan_2FE2S_FER_1,PatternScan_MOLYBDOPTERIN_PROK_1	-	no_errors
KRTAP5-5	0	genome.wustl.edu	37	11	1651191	1651199	+	In_Frame_Del	DEL	GGCTGTGGA	GGCTGTGGA	-	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	GGCTGTGGA	GGCTGTGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	1651191	1651199	GGCTGTGGA	-	DEL	KRTAP5-5	NM_001001480.2	human	genbank	58_37c	+1	validated	in_frame_del	c.121_129	p.GCG44in_frame_del	0.036:0.152:0.136:0.093:0.018:0.001:0.874:0.883:0.301	NULL	PatternScan_2FE2S_FER_1,PatternScan_MOLYBDOPTERIN_PROK_1	-	no_errors
LENG9	0	genome.wustl.edu	37	19	54973989	54973991	+	In_Frame_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	CCT	CCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	19	54973989	54973991	CCT	-	DEL	LENG9	NM_198988.1	human	genbank	58_37c	-1	validated	in_frame_del	c.787_785	p.E262in_frame_del	0.000:0.000:0.000	NULL	HMMPfam_zf-CCCH,superfamily_Cyc_nuc_Pdiester	-	no_errors
LINS1	0	genome.wustl.edu	37	15	101120811	101120811	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	15	101120811	101120811	G	A	SNP	LINS1	NM_001040614.1	human	genbank	58_37c	-1	reviewed	silent	c.237	p.N79	0.000	NULL	NULL	-	no_errors
LIPK	0	genome.wustl.edu	37	10	90512357	90512357	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	10	90512357	90512357	C	G	SNP	LIPK	NM_001080518.1	human	genbank	58_37c	+1	provisional	silent	c.1044	p.P348	0.022	HMMPfam_Abhydrolase_1,superfamily_SSF53474	HMMPfam_Abhydrolase_1,HMMPfam_Abhydro_lipase,PatternScan_LIPASE_SER,superfamily_SSF53474	-	no_errors
LOC100129942	0	genome.wustl.edu	37	15	89533536	89533537	+	RNA	INS	-	-	GGCGGG	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	15	89533536	89533537	-	GGCGGG	INS	LOC100129942	XR_038237.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.000:0.001	-	-	-	pseudogene
LOC100288765	0	genome.wustl.edu	37	9	69830388	69830388	+	Missense_Mutation	SNP	T	T	C	rs35245170	byCluster	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	9	69830388	69830388	T	C	SNP	LOC100288765	XM_002342925.1	human	genbank	58_37c	+1	model	missense	c.14	p.L5S	0.293	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
LRP8	0	genome.wustl.edu	37	1	53715175	53715175	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	53715175	53715175	G	A	SNP	LRP8	NM_004631.3	human	genbank	58_37c	-1	reviewed	silent	c.2730	p.T910	1.000	NULL	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
MAP1A	0	genome.wustl.edu	37	15	43813808	43813808	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	15	43813808	43813808	G	T	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	missense	c.137	p.G46V	1.000	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MLYCD	0	genome.wustl.edu	37	16	83948758	83948758	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	16	83948758	83948758	C	T	SNP	MLYCD	NM_012213.2	human	genbank	58_37c	+1	reviewed	silent	c.1146	p.S382	0.785	HMMPfam_MCD	HMMPfam_MCD	-	no_errors
NEDD4	0	genome.wustl.edu	37	15	56207669	56207669	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	15	56207669	56207669	C	T	SNP	NEDD4	NM_198400.2	human	genbank	58_37c	-1	validated	missense	c.1361	p.R454Q	1.000	NULL	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP	-	no_errors
NHSL1	0	genome.wustl.edu	37	6	138751809	138751809	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	6	138751809	138751809	G	A	SNP	NHSL1	NM_001144060.1	human	genbank	58_37c	-1	validated	nonsense	c.3673	p.R1225*	0.001	NULL	NULL	-	no_errors
NTRK1	0	genome.wustl.edu	37	1	156849829	156849829	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	156849829	156849829	G	A	SNP	NTRK1	NM_002529.3	human	genbank	58_37c	+1	reviewed	silent	c.2085	p.P695	0.022	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00082,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
NUP155	0	genome.wustl.edu	37	5	37310731	37310731	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	5	37310731	37310731	C	T	SNP	NUP155	NM_153485.1	human	genbank	58_37c	-1	reviewed	missense	c.2551	p.A851T	1.000	HMMPfam_Nucleoporin	HMMPfam_Nucleoporin	-	no_errors
OR4X1	0	genome.wustl.edu	37	11	48285568	48285568	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	48285568	48285568	G	T	SNP	OR4X1	NM_001004726.1	human	genbank	58_37c	+1	provisional	silent	c.156	p.V52	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR7E87P	0	genome.wustl.edu	37	11	71304933	71304935	+	In_Frame_Del	DEL	TCG	TCG	-	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	TCG	TCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	71304933	71304935	TCG	-	DEL	OR7E87P	ENST00000329336	human	ensembl	58_37c	+1	known	in_frame_del	c.506_508	p.V170in_frame_del	0.023:0.028:0.021	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,superfamily_SSF81321	-	no_errors
P2RY1	0	genome.wustl.edu	37	3	152554344	152554344	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	152554344	152554344	C	T	SNP	P2RY1	NM_002563.2	human	genbank	58_37c	+1	reviewed	missense	c.773	p.S258L	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PARP8	0	genome.wustl.edu	37	5	50090154	50090154	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	5	50090154	50090154	C	G	SNP	PARP8	NM_024615.3	human	genbank	58_37c	+1	validated	missense	c.851	p.S284C	1.000	NULL	HMMPfam_PARP,superfamily_ADP-ribosylation	-	no_errors
PCMTD1	0	genome.wustl.edu	37	8	52733164	52733164	+	Missense_Mutation	SNP	G	G	C	rs149898988	byFrequency	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	8	52733164	52733164	G	C	SNP	PCMTD1	NM_052937.2	human	genbank	58_37c	-1	validated	missense	c.821	p.P274R	1.000	NULL	HMMPfam_PCMT,PatternScan_PCMT,superfamily_SSF53335	-	no_errors
PHLDB2	0	genome.wustl.edu	37	3	111603283	111603283	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	111603283	111603283	G	A	SNP	PHLDB2	NM_001134438.1	human	genbank	58_37c	+1	validated	missense	c.359	p.G120E	0.075	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
POLR1A	0	genome.wustl.edu	37	2	86276113	86276113	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	2	86276113	86276113	C	T	SNP	POLR1A	NM_015425.3	human	genbank	58_37c	-1	validated	missense	c.2528	p.R843Q	0.005	superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	HMMPfam_RNA_pol_Rpb1_2,HMMSmart_SM00663,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	-	no_errors
PPOX	0	genome.wustl.edu	37	1	161137894	161137894	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	161137894	161137894	G	A	SNP	PPOX	NM_000309.3	human	genbank	58_37c	+1	reviewed	missense	c.448	p.A150T	1.000	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain	-	no_errors
PRB4	0	genome.wustl.edu	37	12	11461753	11461753	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	12	11461753	11461753	C	T	SNP	PRB4	NM_002723.3	human	genbank	58_37c	-1	reviewed	missense	c.164	p.G55E	0.002	NULL	NULL	-	no_errors
RHPN2	0	genome.wustl.edu	37	19	33490566	33490566	+	Missense_Mutation	SNP	T	T	C	rs74582927	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	19	33490566	33490566	T	C	SNP	RHPN2	NM_033103.4	human	genbank	58_37c	-1	reviewed	missense	c.1151	p.Q384R	1.000	HMMPfam_BRO1	HMMPfam_HR1,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_BRO1,HMMSmart_Hr1,superfamily_PKN_effector	-	no_errors
ROPN1B	0	genome.wustl.edu	37	3	125694466	125694466	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	125694466	125694466	C	T	SNP	ROPN1B	NM_001012337.1	human	genbank	58_37c	+1	provisional	silent	c.177	p.V59	0.001	NULL	HMMPfam_RIIa,superfamily_Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit	-	no_errors
ROR1	0	genome.wustl.edu	37	1	64605929	64605929	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	64605929	64605929	G	C	SNP	ROR1	NM_005012.2	human	genbank	58_37c	+1	validated	missense	c.748	p.D250H	1.000	HMMPfam_Fz	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,superfamily_Kringle-like,PatternScan_KRINGLE_1,HMMPfam_Fz,superfamily_Immunoglobulin	-	no_errors
RPL10L	0	genome.wustl.edu	37	14	47120792	47120792	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	14	47120792	47120792	C	T	SNP	RPL10L	NM_080746.2	human	genbank	58_37c	-1	reviewed	missense	c.148	p.G50S	0.999	HMMPfam_Ribosomal_L16,superfamily_Ribosomal_L10e/L16	HMMPfam_Ribosomal_L16,superfamily_Ribosomal_L10e/L16,PatternScan_RIBOSOMAL_L10E	-	no_errors
RPS6KA5	0	genome.wustl.edu	37	14	91360826	91360826	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	14	91360826	91360826	C	A	SNP	RPS6KA5	NM_004755.2	human	genbank	58_37c	-1	validated	missense	c.1575	p.M525I	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
SH3RF1	0	genome.wustl.edu	37	4	170057504	170057504	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	4	170057504	170057504	C	T	SNP	SH3RF1	NM_020870.3	human	genbank	58_37c	-1	reviewed	missense	c.1033	p.E345K	0.999	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
SHISA5	0	genome.wustl.edu	37	3	48538577	48538577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	3	48538577	48538577	C	T	SNP	SHISA5	NM_016479.3	human	genbank	58_37c	-1	validated	missense	c.226	p.E76K	0.000	NULL	NULL	-	no_errors
SLC13A5	0	genome.wustl.edu	37	17	6606341	6606341	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	17	6606341	6606341	C	T	SNP	SLC13A5	NM_177550.3	human	genbank	58_37c	-1	validated	missense	c.664	p.A222T	1.000	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors
SLC6A12	0	genome.wustl.edu	37	12	302499	302499	+	Missense_Mutation	SNP	G	G	A	rs141848384	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	12	302499	302499	G	A	SNP	SLC6A12	NM_001122847.1	human	genbank	58_37c	-1	validated	missense	c.1474	p.R492W	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
SLC8A1	0	genome.wustl.edu	37	2	40405590	40405590	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	2	40405590	40405590	T	C	SNP	SLC8A1	NM_021097.2	human	genbank	58_37c	-1	validated	missense	c.1852	p.K618E	1.000	HMMPfam_Calx-beta,HMMSmart_SM00237	HMMPfam_Calx-beta,HMMSmart_SM00237,HMMPfam_Na_Ca_ex	-	no_errors
SPTA1	0	genome.wustl.edu	37	1	158647585	158647585	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	158647585	158647585	T	C	SNP	SPTA1	NM_003126.2	human	genbank	58_37c	-1	reviewed	silent	c.852	p.E284	0.993	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Spectrin,HMMPfam_efhand_Ca_insen,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
TBC1D1	0	genome.wustl.edu	37	4	38020062	38020062	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	4	38020062	38020062	C	T	SNP	TBC1D1	NM_015173.2	human	genbank	58_37c	+1	validated	nonsense	c.970	p.Q324*	1.000	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_PID,HMMSmart_SM00462,PatternScan_LECTIN_LEGUME_BETA,superfamily_PH domain-like	-	no_errors
TBC1D8B	0	genome.wustl.edu	37	X	106116842	106116842	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	X	106116842	106116842	C	G	SNP	TBC1D8B	NM_017752.2	human	genbank	58_37c	+1	validated	missense	c.3010	p.H1004D	1.000	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_GRAM,HMMSmart_SM00568,PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
TEX10	0	genome.wustl.edu	37	9	103092306	103092306	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	9	103092306	103092306	C	G	SNP	TEX10	NM_017746.3	human	genbank	58_37c	-1	validated	missense	c.1396	p.E466Q	0.998	NULL	HMMPfam_HEAT,superfamily_ARM-type_fold	-	no_errors
TNFAIP3	0	genome.wustl.edu	37	6	138200310	138200310	+	Silent	SNP	G	G	A	rs140120540	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	6	138200310	138200310	G	A	SNP	TNFAIP3	NM_006290.2	human	genbank	58_37c	+1	reviewed	silent	c.1728	p.P576	0.000	NULL	HMMPfam_zf-A20,HMMSmart_ZnF_A20,HMMPfam_OTU	-	no_errors
TNR	0	genome.wustl.edu	37	1	175365832	175365832	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	175365832	175365832	G	A	SNP	TNR	NM_003285.2	human	genbank	58_37c	-1	validated	missense	c.1088	p.A363V	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00181,superfamily_Fibronectin type III,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin	-	no_errors
TTC28	0	genome.wustl.edu	37	22	28692181	28692184	+	Splice_Site	DEL	CCTA	CCTA	-	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	CCTA	CCTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	22	28692181	28692184	CCTA	-	DEL	TTC28	NM_001145418.1	human	genbank	58_37c	-1	validated	splice_site_del	c.933+2_933+1	e5+2	1.000:1.000:1.000:1.000	-	-	-	no_errors
TXNL1	0	genome.wustl.edu	37	18	54270189	54270189	+	RNA	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	18	54270189	54270189	C	G	SNP	TXNL1	NR_024546.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.174	-	-	-	no_errors
UBE4B	0	genome.wustl.edu	37	1	10161225	10161225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	10161225	10161225	G	A	SNP	UBE4B	NM_001105562.1	human	genbank	58_37c	+1	reviewed	missense	c.407	p.R136Q	1.000	NULL	HMMPfam_U-box,HMMSmart_SM00504,HMMPfam_Ufd2P_core,superfamily_RING/U-box	-	no_errors
UBXN2A	0	genome.wustl.edu	37	2	24194187	24194187	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	2	24194187	24194187	A	G	SNP	UBXN2A	NM_181713.3	human	genbank	58_37c	+1	validated	missense	c.83	p.N28S	0.006	NULL	HMMPfam_UBX,HMMSmart_UBX,HMMPfam_SEP,HMMSmart_SEP,superfamily_SEP,superfamily_SSF54236	-	no_errors
UNC13A	0	genome.wustl.edu	37	19	17740081	17740081	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	19	17740081	17740081	C	A	SNP	UNC13A	NM_001080421.2	human	genbank	58_37c	-1	validated	missense	c.3985	p.A1329S	0.836	HMMPfam_DUF1041	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD,superfamily_Cysteine-rich domain	-	no_errors
USP34	0	genome.wustl.edu	37	2	61473500	61473500	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	2	61473500	61473500	G	A	SNP	USP34	NM_014709.3	human	genbank	58_37c	-1	validated	silent	c.6507	p.I2169	1.000	HMMPfam_UCH,superfamily_Cysteine proteinases	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
WDR59	0	genome.wustl.edu	37	16	74943795	74943795	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	16	74943795	74943795	C	A	SNP	WDR59	NM_030581.3	human	genbank	58_37c	-1	validated	silent	c.1410	p.L470	1.000	HMMSmart_SM00591	HMMSmart_SM00320,PatternScan_EGF_LAM_1,HMMSmart_SM00591,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
WNT2B	0	genome.wustl.edu	37	1	113058811	113058811	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	1	113058811	113058811	C	A	SNP	WNT2B	NM_024494.2	human	genbank	58_37c	+1	reviewed	silent	c.453	p.V151	0.892	HMMPfam_wnt,HMMSmart_SM00097	HMMPfam_wnt,HMMSmart_SM00097,PatternScan_WNT1	-	no_errors
XRRA1	0	genome.wustl.edu	37	11	74617338	74617338	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	11	74617338	74617338	C	G	SNP	XRRA1	NM_182969.1	human	genbank	58_37c	-1	validated	missense	c.925	p.D309H	0.133	superfamily_L domain-like	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
ZNF395	0	genome.wustl.edu	37	8	28209226	28209228	+	In_Frame_Del	DEL	GCA	GCA	-	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	GCA	GCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	8	28209226	28209228	GCA	-	DEL	ZNF395	NM_018660.2	human	genbank	58_37c	-1	validated	in_frame_del	c.1019_1017	p.A341in_frame_del	0.082:0.295:0.411	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF806	0	genome.wustl.edu	37	2	133075007	133075007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	2	133075007	133075007	C	T	SNP	ZNF806	XM_001724242.2	human	genbank	58_37c	+1	model	silent	c.468	p.T156	0.001	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZSCAN5C	0	genome.wustl.edu	37	19	56717432	56717432	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A250-01A-31D-A167-09	TCGA-AR-A250-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7d9a372-fcd1-4462-9e0b-7eb46ddb68fd	0035e0c2-0376-4050-a03e-df556d408b94	19	56717432	56717432	C	A	SNP	ZSCAN5C	ENST00000376267	human	ensembl	58_37c	+1	known	missense	c.150	p.F50L	0.006	HMMPfam_SCAN,HMMSmart_SCAN	HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
