Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AMAC1	146861	genome.wustl.edu	37	17	33521200	33521200	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	17	33521200	33521200	C	A	SNP	AMAC1	NM_152462.2	human	genbank	58_37c	-1	validated	missense	c.127	p.A43S	0.998	NULL	HMMPfam_DUF6,superfamily_Multidrug resistance efflux transporter EmrE	-	no_errors
C14orf174	161394	genome.wustl.edu	37	14	77844471	77844471	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	14	77844471	77844471	A	G	SNP	C14orf174	NM_001010860.1	human	genbank	58_37c	+1	provisional	missense	c.710	p.K237R	0.000	NULL	HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2	-	no_errors
ENSG00000246091	0	genome.wustl.edu	37	19	4448462	4448462	+	RNA	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	19	4448462	4448462	C	T	SNP	UBXN6	NM_025241.2	human	genbank	58_37c	-1	validated	intronic	c.442-50	e5-50	0.000	-	-	-	no_errors
FAM71D	161142	genome.wustl.edu	37	14	67675050	67675050	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	14	67675050	67675050	A	G	SNP	FAM71D	NM_173526.2	human	genbank	58_37c	+1	validated	silent	c.1044	p.Q348	0.003	NULL	NULL	-	no_errors
FES	2242	genome.wustl.edu	37	15	91436376	91436376	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	15	91436376	91436376	G	T	SNP	FES	NM_002005.3	human	genbank	58_37c	+1	reviewed	missense	c.1873	p.V625F	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_FCH,HMMSmart_SM00055,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
GRIK4	2900	genome.wustl.edu	37	11	120531052	120531052	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	11	120531052	120531052	G	T	SNP	GRIK4	NM_014619.2	human	genbank	58_37c	+1	reviewed	missense	c.25	p.V9L	1.000	NULL	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
GSTO2	119391	genome.wustl.edu	37	10	106057391	106057391	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	10	106057391	106057391	A	G	SNP	GSTO2	NM_183239.1	human	genbank	58_37c	+1	provisional	missense	c.524	p.D175G	1.000	superfamily_GST_C_like	HMMPfam_GST_N,superfamily_GST_C_like,superfamily_Thiordxn-like_fd	-	no_errors
HRASLS	57110	genome.wustl.edu	37	3	192988414	192988414	+	Missense_Mutation	SNP	G	G	A	rs147242865	byFrequency	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	3	192988414	192988414	G	A	SNP	HRASLS	NM_020386.3	human	genbank	58_37c	+1	validated	missense	c.427	p.V143I	1.000	NULL	HMMPfam_NC	-	no_errors
IGSF22	283284	genome.wustl.edu	37	11	18738496	18738496	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	11	18738496	18738496	C	T	SNP	IGSF22	NM_173588.3	human	genbank	58_37c	-1	validated	missense	c.1025	p.R342H	0.987	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726	HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,superfamily_SSF48726	-	no_errors
INPPL1	3636	genome.wustl.edu	37	11	71943727	71943727	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	11	71943727	71943727	C	T	SNP	INPPL1	NM_001567.3	human	genbank	58_37c	+1	reviewed	silent	c.1770	p.L590	1.000	HMMSmart_IPPc,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos	HMMSmart_IPPc,HMMPfam_SH2,HMMSmart_SH2,HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos,superfamily_SAM_homology,superfamily_SSF55550	-	no_errors
ITGB4	3691	genome.wustl.edu	37	17	73733725	73733725	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	17	73733725	73733725	G	A	SNP	ITGB4	NM_000213.3	human	genbank	58_37c	+1	reviewed	silent	c.2220	p.K740	1.000	NULL	HMMPfam_Integrin_beta,HMMSmart_SM00187,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMSmart_SM00423,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_Integrin_B_tail,superfamily_Integrin beta tail domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_INTEGRIN_BETA,superfamily_vWA-like,superfamily_EGF/Laminin,superfamily_Integrin domains	-	no_errors
KIAA1267	284058	genome.wustl.edu	37	17	44171973	44171973	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	17	44171973	44171973	G	A	SNP	KIAA1267	NM_015443.2	human	genbank	58_37c	-1	validated	nonsense	c.1384	p.R462*	1.000	NULL	NULL	-	no_errors
KIF13A	63971	genome.wustl.edu	37	6	17777584	17777584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	6	17777584	17777584	G	A	SNP	KIF13A	NM_022113.4	human	genbank	58_37c	-1	validated	missense	c.4094	p.A1365V	0.999	NULL	HMMPfam_FHA,HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_SMAD/FHA domain,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIF2C	11004	genome.wustl.edu	37	1	45221633	45221633	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	1	45221633	45221633	G	A	SNP	KIF2C	NM_006845.3	human	genbank	58_37c	+1	validated	silent	c.792	p.R264	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LGALS14	56891	genome.wustl.edu	37	19	40197252	40197252	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	19	40197252	40197252	C	T	SNP	LGALS14	NM_203471.1	human	genbank	58_37c	+1	reviewed	missense	c.118	p.P40S	0.001	HMMPfam_Gal-bind_lectin,HMMSmart_GLECT,superfamily_ConA_like_lec_gl	HMMPfam_Gal-bind_lectin,HMMSmart_GLECT,superfamily_ConA_like_lec_gl	-	no_errors
LILRA3	11026	genome.wustl.edu	37	19	54803118	54803118	+	Missense_Mutation	SNP	C	C	T	rs145317507	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	19	54803118	54803118	C	T	SNP	LILRA3	NM_006865.3	human	genbank	58_37c	-1	validated	missense	c.559	p.V187M	0.000	HMMPfam_ig,superfamily_SSF48726	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	-	no_errors
LOC100288690	0	genome.wustl.edu	37	10	46217131	46217131	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	10	46217131	46217131	C	T	SNP	LOC100288690	XM_002342980.1	human	genbank	58_37c	-1	model	missense	c.196	p.V66I	0.000	NULL	NULL	-	no_errors
MAP3K1	4214	genome.wustl.edu	37	5	56168719	56168719	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	5	56168719	56168719	C	T	SNP	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	nonsense	c.1573	p.Q525*	0.998	NULL	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MAP3K1	4214	genome.wustl.edu	37	5	56184097	56184097	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	5	56184097	56184097	T	A	SNP	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	missense	c.4302	p.S1434R	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
NAB1	4664	genome.wustl.edu	37	2	191524294	191524294	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	2	191524294	191524294	C	-	DEL	NAB1	NM_005966.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.392	p.A131fs	0.642	NULL	HMMPfam_Nab1,HMMPfam_NCD1,HMMPfam_NCD2	-	no_errors
NASP	4678	genome.wustl.edu	37	1	46080700	46080700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	1	46080700	46080700	C	T	SNP	NASP	NM_172164.1	human	genbank	58_37c	+1	reviewed	missense	c.1688	p.A563V	1.000	HMMPfam_SHNi-TPR,HMMSmart_TPR,superfamily_SSF48452	HMMPfam_TPR_1,HMMPfam_SHNi-TPR,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
NEK5	341676	genome.wustl.edu	37	13	52676092	52676092	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	13	52676092	52676092	C	T	SNP	NEK5	NM_199289.1	human	genbank	58_37c	-1	provisional	missense	c.869	p.R290Q	0.000	superfamily_Kinase_like	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NGF	4803	genome.wustl.edu	37	1	115829015	115829015	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	1	115829015	115829015	C	T	SNP	NGF	NM_002506.2	human	genbank	58_37c	-1	reviewed	silent	c.402	p.S134	0.761	HMMPfam_NGF,HMMSmart_NGF,superfamily_SSF57501	HMMPfam_NGF,HMMSmart_NGF,PatternScan_NGF_1,superfamily_SSF57501	-	no_errors
RGSL1	353299	genome.wustl.edu	37	1	182442910	182442910	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	1	182442910	182442910	G	A	SNP	RGSL1	NM_001137669.1	human	genbank	58_37c	+1	validated	missense	c.664	p.V222I	0.000	NULL	superfamily_Regulator of G-protein signaling RGS	-	no_errors
RTN1	6252	genome.wustl.edu	37	14	60212850	60212863	+	Frame_Shift_Del	DEL	AATGTATTTATAGG	AATGTATTTATAGG	-	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	AATGTATTTATAGG	AATGTATTTATAGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	14	60212850	60212863	AATGTATTTATAGG	-	DEL	RTN1	NM_021136.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.591_578	p.A193fs	1.000:1.000:1.000:1.000:1.000:1.000:0.995:1.000:0.998:0.831:0.839:0.993:0.999:1.000	NULL	HMMPfam_Reticulon,PatternScan_HISTONE_H4	-	no_errors
SLC6A20	54716	genome.wustl.edu	37	3	45812813	45812813	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	3	45812813	45812813	G	A	SNP	SLC6A20	NM_020208.3	human	genbank	58_37c	-1	reviewed	silent	c.831	p.I277	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
SPTBN5	51332	genome.wustl.edu	37	15	42143319	42143319	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	15	42143319	42143319	G	A	SNP	SPTBN5	NM_016642.2	human	genbank	58_37c	-1	validated	silent	c.10668	p.L3556	0.000	HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00150,superfamily_PH domain-like	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Spectrin,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_PH domain-like	-	no_errors
ST3GAL2	6483	genome.wustl.edu	37	16	70432269	70432269	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	16	70432269	70432269	G	A	SNP	ST3GAL2	NM_006927.3	human	genbank	58_37c	-1	reviewed	silent	c.165	p.A55	0.002	NULL	HMMPfam_Glyco_transf_29	-	no_errors
TBC1D21	161514	genome.wustl.edu	37	15	74181422	74181422	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	15	74181422	74181422	T	A	SNP	TBC1D21	NM_153356.1	human	genbank	58_37c	+1	provisional	missense	c.991	p.L331I	0.008	NULL	HMMSmart_TBC,superfamily_RabGAP_TBC	-	no_errors
TRPS1	7227	genome.wustl.edu	37	8	116632154	116632163	+	Frame_Shift_Del	DEL	TTCTGACATC	TTCTGACATC	-	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	TTCTGACATC	TTCTGACATC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	8	116632154	116632163	TTCTGACATC	-	DEL	TRPS1	NM_014112.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.171_162	p.M55fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMPfam_GATA,HMMSmart_ZnF_GATA,PatternScan_GATA_ZN_FINGER_1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57716	-	no_errors
TRPS1	7227	genome.wustl.edu	37	8	116632168	116632170	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	8	116632168	116632170	CTG	-	DEL	TRPS1	NM_014112.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.157_155	p.A52in_frame_del	1.000:1.000:1.000	NULL	HMMPfam_GATA,HMMSmart_ZnF_GATA,PatternScan_GATA_ZN_FINGER_1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57716	-	no_errors
YLPM1	56252	genome.wustl.edu	37	14	75264488	75264488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	14	75264488	75264488	C	T	SNP	YLPM1	NM_019589.2	human	genbank	58_37c	+1	validated	missense	c.2488	p.P830S	1.000	NULL	HMMPfam_YLP,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF585B	92285	genome.wustl.edu	37	19	37677742	37677742	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RM-01A-11D-A099-09	TCGA-B6-A0RM-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3e03385e-f0fa-4e11-8bed-c6316802e1a9	a41df4f6-c661-43ef-b9df-bc0c74a46fe8	19	37677742	37677742	C	T	SNP	ZNF585B	NM_152279.3	human	genbank	58_37c	-1	validated	missense	c.697	p.E233K	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
