Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC12	94160	genome.wustl.edu	37	16	48149418	48149418	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	16	48149418	48149418	C	T	SNP	ABCC12	NM_033226.2	human	genbank	58_37c	-1	reviewed	missense	c.1897	p.V633M	0.994	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABL1	25	genome.wustl.edu	37	9	133750254	133750254	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	9	133750254	133750254	G	C	SNP	ABL1	NM_007313.2	human	genbank	58_37c	+1	reviewed	splice_site	c.1143-1	e7-1	1.000	-	-	-	no_errors
ADCY2	108	genome.wustl.edu	37	5	7802447	7802447	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	7802447	7802447	C	G	SNP	ADCY2	NM_020546.2	human	genbank	58_37c	+1	reviewed	silent	c.2745	p.L915	0.999	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_DUF1053,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ADD1	118	genome.wustl.edu	37	4	2930220	2930220	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	4	2930220	2930220	G	A	SNP	ADD1	NM_014189.2	human	genbank	58_37c	+1	reviewed	silent	c.2277	p.L759	1.000	NULL	HMMPfam_Aldolase_II,superfamily_Aldolase_II_N	-	no_errors
AKAP9	10142	genome.wustl.edu	37	7	91712715	91712715	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	7	91712715	91712715	C	G	SNP	AKAP9	NM_005751.4	human	genbank	58_37c	+1	reviewed	missense	c.8392	p.L2798V	0.124	NULL	PatternScan_CPSASE_2,HMMPfam_PACT_coil_coil	-	no_errors
ALOX12	239	genome.wustl.edu	37	17	6902773	6902773	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	6902773	6902773	G	C	SNP	ALOX12	NM_000697.2	human	genbank	58_37c	+1	validated	missense	c.795	p.E265D	0.981	HMMPfam_Lipoxygenase,superfamily_Lipoxygenase	HMMPfam_PLAT,HMMSmart_LH2,superfamily_Lipase_LipOase,HMMPfam_Lipoxygenase,PatternScan_LIPOXYGENASE_2,PatternScan_LIPOXYGENASE_1,superfamily_Lipoxygenase	-	no_errors
ANAPC7	51434	genome.wustl.edu	37	12	110832986	110832986	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	12	110832986	110832986	C	T	SNP	ANAPC7	NM_016238.2	human	genbank	58_37c	-1	reviewed	missense	c.430	p.E144K	1.000	superfamily_TPR-like	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
ARID2	196528	genome.wustl.edu	37	12	46211464	46211464	+	Nonsense_Mutation	SNP	C	C	T	rs146524163	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	12	46211464	46211464	C	T	SNP	ARID2	NM_152641.2	human	genbank	58_37c	+1	validated	nonsense	c.430	p.Q144*	1.000	NULL	"HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like,PatternScan_ZINC_FINGER_C2H2_1,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
ATM	472	genome.wustl.edu	37	11	108186737	108186737	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	108186737	108186737	G	A	SNP	ATM	NM_000051.3	human	genbank	58_37c	+1	reviewed	splice_site	c.6096-1	e41-1	1.000	-	-	-	no_errors
C14orf38	729665	genome.wustl.edu	37	14	60031832	60031832	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	14	60031832	60031832	T	C	SNP	C14orf38	ENST00000281581	human	ensembl	58_37c	-1	known	missense	c.653	p.E218G	0.007	NULL	NULL	-	no_errors
C17orf81	23587	genome.wustl.edu	37	17	7158001	7158001	+	Missense_Mutation	SNP	G	G	C	rs145994083	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	7158001	7158001	G	C	SNP	C17orf81	NM_015362.3	human	genbank	58_37c	+1	validated	missense	c.336	p.K112N	0.000	HMMPfam_Hap2_elong	HMMPfam_Hap2_elong	-	no_errors
C7orf66	154907	genome.wustl.edu	37	7	108524578	108524578	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	7	108524578	108524578	C	G	SNP	C7orf66	NM_001024607.1	human	genbank	58_37c	-1	predicted	silent	c.12	p.V4	0.000	NULL	NULL	-	no_errors
CACNA1D	776	genome.wustl.edu	37	3	53839094	53839094	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	3	53839094	53839094	C	T	SNP	CACNA1D	NM_000720.2	human	genbank	58_37c	+1	validated	silent	c.5730	p.F1910	1.000	NULL	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_SSF81324	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48681624	48681624	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	48681624	48681624	C	T	SNP	CACNA1G	NM_018896.3	human	genbank	58_37c	+1	validated	silent	c.4278	p.F1426	0.997	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CDK1	0	genome.wustl.edu	37	10	62553685	62553685	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	10	62553685	62553685	G	A	SNP	CDK1	NM_001786.4	human	genbank	58_37c	+1	reviewed	silent	c.846	p.L282	1.000	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CST5	1473	genome.wustl.edu	37	20	23860130	23860130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	20	23860130	23860130	C	T	SNP	CST5	NM_001900.4	human	genbank	58_37c	-1	reviewed	missense	c.184	p.D62N	0.001	HMMPfam_Cystatin,HMMSmart_CY,superfamily_SSF54403	HMMPfam_Cystatin,HMMSmart_CY,PatternScan_CYSTATIN,superfamily_SSF54403	-	no_errors
DNALI1	7802	genome.wustl.edu	37	1	38024964	38024964	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	38024964	38024964	G	-	DEL	DNALI1	NM_003462.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.330	p.V111fs	1.000	HMMPfam_Ax_dynein_light	HMMPfam_Ax_dynein_light	-	no_errors
EXOC3	11336	genome.wustl.edu	37	5	446329	446329	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	446329	446329	G	A	SNP	EXOC3	NM_007277.4	human	genbank	58_37c	+1	reviewed	silent	c.9	p.E3	1.000	NULL	HMMPfam_Sec6	-	no_errors
FAM75C1	441452	genome.wustl.edu	37	9	90535186	90535186	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	9	90535186	90535186	G	C	SNP	FAM75C1	NM_001145124.1	human	genbank	58_37c	+1	validated	missense	c.364	p.E122Q	0.001	NULL	NULL	-	no_errors
FAR1	84188	genome.wustl.edu	37	11	13721953	13721953	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	13721953	13721953	C	T	SNP	FAR1	NM_032228.5	human	genbank	58_37c	+1	validated	silent	c.279	p.L93	0.730	HMMPfam_NAD_binding_4,superfamily_NAD(P)-bd	HMMPfam_Sterile,HMMPfam_NAD_binding_4,superfamily_NAD(P)-bd	-	no_errors
FRMPD2	143162	genome.wustl.edu	37	10	49379163	49379163	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	10	49379163	49379163	G	C	SNP	FRMPD2	NM_001018071.3	human	genbank	58_37c	-1	reviewed	silent	c.3312	p.L1104	0.000	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00750,HMMPfam_FERM_N,HMMPfam_FERM_C,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like,superfamily_Ubiquitin-like	-	no_errors
GMDS	2762	genome.wustl.edu	37	6	2124947	2124947	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	6	2124947	2124947	C	G	SNP	GMDS	NM_001500.2	human	genbank	58_37c	-1	validated	missense	c.121	p.E41Q	1.000	HMMPfam_Epimerase,superfamily_NAD(P)-bd	HMMPfam_Epimerase,superfamily_NAD(P)-bd	-	no_errors
GRIA1	2890	genome.wustl.edu	37	5	153065794	153065794	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	153065794	153065794	G	C	SNP	GRIA1	NM_000827.3	human	genbank	58_37c	+1	reviewed	missense	c.1039	p.E347Q	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
HIPK1	204851	genome.wustl.edu	37	1	114483438	114483438	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	114483438	114483438	C	G	SNP	HIPK1	NM_198268.1	human	genbank	58_37c	+1	reviewed	missense	c.433	p.L145V	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
IFIH1	64135	genome.wustl.edu	37	2	163128799	163128799	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	163128799	163128799	C	G	SNP	IFIH1	NM_022168.2	human	genbank	58_37c	-1	reviewed	missense	c.2553	p.E851D	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_CARD,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_ResIII,superfamily_DEATH domain,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
IKBKE	9641	genome.wustl.edu	37	1	206658614	206658614	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	206658614	206658614	G	A	SNP	IKBKE	NM_014002.2	human	genbank	58_37c	+1	validated	silent	c.1587	p.K529	0.997	NULL	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
INTS8	55656	genome.wustl.edu	37	8	95884207	95884207	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	8	95884207	95884207	T	C	SNP	INTS8	NM_017864.2	human	genbank	58_37c	+1	provisional	missense	c.2510	p.I837T	1.000	NULL	NULL	-	no_errors
JAGN1	84522	genome.wustl.edu	37	3	9934708	9934708	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	3	9934708	9934708	C	T	SNP	JAGN1	NM_032492.3	human	genbank	58_37c	+1	validated	nonsense	c.199	p.Q67*	0.986	HMMPfam_DUF1352	HMMPfam_DUF1352	-	no_errors
KCNQ2	3785	genome.wustl.edu	37	20	62078142	62078142	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	20	62078142	62078142	G	C	SNP	KCNQ2	NM_172107.2	human	genbank	58_37c	-1	reviewed	missense	c.345	p.I115M	1.000	superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_KCNQ_channel,superfamily_Voltage-gated potassium channels	-	no_errors
MAP2K4	6416	genome.wustl.edu	37	17	12043202	12043202	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	12043202	12043202	G	A	SNP	MAP2K4	NM_003010.2	human	genbank	58_37c	+1	reviewed	splice_site	c.1086+1	e10+1	1.000	-	-	-	no_errors
MRPS15	64960	genome.wustl.edu	37	1	36921913	36921913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	36921913	36921913	G	A	SNP	MRPS15	NM_031280.3	human	genbank	58_37c	-1	reviewed	missense	c.511	p.R171C	0.999	HMMPfam_Ribosomal_S15,superfamily_S15/NS1 RNA-binding domain	HMMPfam_Ribosomal_S15,superfamily_S15/NS1 RNA-binding domain	-	no_errors
NCKAP5	344148	genome.wustl.edu	37	2	133541462	133541462	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	133541462	133541462	C	T	SNP	NCKAP5	NM_207363.2	human	genbank	58_37c	-1	validated	silent	c.2922	p.L974	1.000	NULL	NULL	-	no_errors
NDNL2	56160	genome.wustl.edu	37	15	29561355	29561355	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	15	29561355	29561355	G	A	SNP	NDNL2	NM_138704.2	human	genbank	58_37c	-1	reviewed	silent	c.555	p.L185	0.960	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
NEB	4703	genome.wustl.edu	37	2	152406191	152406191	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	152406191	152406191	G	C	SNP	NEB	NM_004543.4	human	genbank	58_37c	-1	reviewed	missense	c.14905	p.H4969D	0.511	HMMPfam_Nebulin,HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NHSL2	340527	genome.wustl.edu	37	X	71358727	71358727	+	Silent	SNP	C	C	T	rs145938118	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	X	71358727	71358727	C	T	SNP	NHSL2	NM_001013627.2	human	genbank	58_37c	+1	provisional	silent	c.231	p.V77	0.000	NULL	NULL	-	no_errors
OR1N1	138883	genome.wustl.edu	37	9	125289222	125289222	+	Silent	SNP	C	C	T	rs142821264	byFrequency	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	9	125289222	125289222	C	T	SNP	OR1N1	NM_012363.1	human	genbank	58_37c	-1	provisional	silent	c.351	p.A117	0.014	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PAPPA	5069	genome.wustl.edu	37	9	118950362	118950362	+	Missense_Mutation	SNP	G	G	A	rs151114477	byFrequency	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	9	118950362	118950362	G	A	SNP	PAPPA	NM_002581.3	human	genbank	58_37c	+1	reviewed	missense	c.1345	p.V449M	0.976	HMMPfam_Notch,HMMSmart_NL,superfamily_SSF55486	HMMPfam_Sushi,HMMSmart_CCP,HMMPfam_Notch,HMMSmart_NL,PatternScan_ZINC_PROTEASE,HMMSmart_LamGL,HMMPfam_Peptidase_M43,superfamily_ConA_like_lec_gl,superfamily_Complement_control_module,superfamily_SSF55486	-	no_errors
PDZD2	23037	genome.wustl.edu	37	5	32101067	32101070	+	In_Frame_Del	DEL	TAAG	TAAG	-	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	TAAG	TAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	32101067	32101070	TAAG	-	DEL	PDZD2	ENST00000397559	human	ensembl	58_37c	+1	known	splice_site_del	c.NULL	NULL	0.001:0.002:0.002:0.001	-	-	-	no_coding_region
RGPD3	653489	genome.wustl.edu	37	2	107042506	107042506	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	107042506	107042506	G	A	SNP	RGPD3	NM_001144013.1	human	genbank	58_37c	-1	validated	missense	c.2644	p.P882S	1.000	NULL	HMMPfam_Ran_BP1,HMMSmart_RanBD,HMMPfam_GRIP,HMMSmart_Grip,HMMPfam_TPR_1,superfamily_SSF48452,superfamily_SSF50729	-	no_errors
RRM2	6241	genome.wustl.edu	37	2	10269010	10269010	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	10269010	10269010	A	G	SNP	RRM2	NM_001034.3	human	genbank	58_37c	+1	reviewed	silent	c.834	p.K278	0.998	HMMPfam_Ribonuc_red_sm,superfamily_Ferritin/RR_like	HMMPfam_Ribonuc_red_sm,PatternScan_RIBORED_SMALL,superfamily_Ferritin/RR_like	-	no_errors
SALL2	6297	genome.wustl.edu	37	14	21992915	21992915	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	14	21992915	21992915	G	A	SNP	SALL2	NM_005407.1	human	genbank	58_37c	-1	validated	missense	c.947	p.S316L	0.047	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
SEPT1	1731	genome.wustl.edu	37	16	30393617	30393617	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	16	30393617	30393617	C	G	SNP	SEPT1	NM_052838.2	human	genbank	58_37c	-1	reviewed	missense	c.73	p.D25H	1.000	HMMPfam_Septin,superfamily_SSF52540	HMMPfam_Septin,superfamily_SSF52540	-	no_errors
SLFN12L	342615	genome.wustl.edu	37	17	33807200	33807200	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	33807200	33807200	C	T	SNP	SLFN12L	NM_001145027.1	human	genbank	58_37c	-1	validated	missense	c.116	p.R39H	0.078	NULL	HMMPfam_AAA_4	-	no_errors
STK33	65975	genome.wustl.edu	37	11	8435219	8435219	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	8435219	8435219	C	T	SNP	STK33	NM_030906.2	human	genbank	58_37c	-1	validated	silent	c.1167	p.V389	0.220	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
SWAP70	23075	genome.wustl.edu	37	11	9735179	9735179	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	9735179	9735179	C	T	SNP	SWAP70	NM_015055.2	human	genbank	58_37c	+1	validated	missense	c.407	p.S136L	0.934	superfamily_SSF47473	HMMPfam_PH,HMMSmart_PH,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
TH1L	51497	genome.wustl.edu	37	20	57564035	57564035	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	20	57564035	57564035	G	A	SNP	TH1L	NM_198976.1	human	genbank	58_37c	+1	reviewed	missense	c.490	p.E164K	1.000	HMMPfam_TH1	HMMPfam_TH1	-	no_errors
USP12	219333	genome.wustl.edu	37	13	27664021	27664021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	13	27664021	27664021	G	A	SNP	USP12	NM_182488.2	human	genbank	58_37c	-1	provisional	missense	c.733	p.R245W	1.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
VPS13B	157680	genome.wustl.edu	37	8	100729551	100729551	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	8	100729551	100729551	G	C	SNP	VPS13B	NM_017890.3	human	genbank	58_37c	+1	reviewed	missense	c.6682	p.E2228Q	1.000	NULL	PatternScan_ZINC_PROTEASE	-	no_errors
VPS41	27072	genome.wustl.edu	37	7	38796567	38796567	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	7	38796567	38796567	C	G	SNP	VPS41	NM_014396.3	human	genbank	58_37c	-1	reviewed	missense	c.1566	p.K522N	1.000	superfamily_WD40 repeat-like,superfamily_ARM repeat	HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_WD40 repeat-like,superfamily_ARM repeat,superfamily_RING/U-box	-	no_errors
ZNF610	162963	genome.wustl.edu	37	19	52856956	52856956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	19	52856956	52856956	G	A	SNP	ZNF610	NM_173530.2	human	genbank	58_37c	+1	validated	missense	c.85	p.V29M	0.972	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
