Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABHD2	11057	genome.wustl.edu	37	15	89731456	89731456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	15	89731456	89731456	C	T	SNP	ABHD2	NM_007011.7	human	genbank	58_37c	+1	reviewed	missense	c.848	p.P283L	1.000	HMMPfam_Abhydrolase_1,superfamily_SSF53474	HMMPfam_Abhydrolase_1,PatternScan_UPF0017,superfamily_SSF53474	-	no_errors
AKAP11	11215	genome.wustl.edu	37	13	42876522	42876522	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	13	42876522	42876522	G	A	SNP	AKAP11	NM_016248.2	human	genbank	58_37c	+1	reviewed	missense	c.3640	p.A1214T	1.000	NULL	NULL	-	no_errors
AKNAD1	0	genome.wustl.edu	37	1	109394956	109394956	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	109394956	109394956	C	G	SNP	AKNAD1	NM_152763.3	human	genbank	58_37c	-1	validated	missense	c.331	p.D111H	0.066	NULL	NULL	-	no_errors
ALS2CR8	79800	genome.wustl.edu	37	2	203826027	203826027	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	2	203826027	203826027	A	G	SNP	ALS2CR8	NM_001104586.1	human	genbank	58_37c	+1	validated	missense	c.710	p.H237R	1.000	NULL	NULL	-	no_errors
ARAP3	64411	genome.wustl.edu	37	5	141059669	141059669	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	5	141059669	141059669	G	C	SNP	ARAP3	NM_022481.5	human	genbank	58_37c	-1	reviewed	missense	c.385	p.P129A	0.998	NULL	HMMPfam_RA,HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP,HMMSmart_SAM,HMMPfam_PH,HMMSmart_PH,superfamily_Rho_GAP,superfamily_SAM_homology,HMMPfam_SAM_2,superfamily_SSF50729	-	no_errors
ATP11B	23200	genome.wustl.edu	37	3	182554293	182554293	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	182554293	182554293	G	A	SNP	ATP11B	ENST00000493826	human	ensembl	58_37c	+1	known	silent	c.587	p.*196	0.000	NULL	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	-	no_errors
ATP12A	479	genome.wustl.edu	37	13	25265155	25265155	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	13	25265155	25265155	C	T	SNP	ATP12A	NM_001676.5	human	genbank	58_37c	+1	reviewed	missense	c.835	p.R279C	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
ATP4B	496	genome.wustl.edu	37	13	114303807	114303807	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	13	114303807	114303807	A	C	SNP	ATP4B	NM_000705.3	human	genbank	58_37c	-1	reviewed	missense	c.758	p.I253S	0.560	HMMPfam_Na_K-ATPase	HMMPfam_Na_K-ATPase,PatternScan_ATPASE_NA_K_BETA_1,PatternScan_ATPASE_NA_K_BETA_2	-	no_errors
ATXN7L2	127002	genome.wustl.edu	37	1	110031008	110031008	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	110031008	110031008	A	G	SNP	ATXN7L2	NM_153340.4	human	genbank	58_37c	+1	validated	missense	c.704	p.K235R	1.000	HMMPfam_SCA7	HMMPfam_SCA7	-	no_errors
BID	637	genome.wustl.edu	37	22	18220878	18220889	+	In_Frame_Del	DEL	TGGCCACCTTCT	TGGCCACCTTCT	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	TGGCCACCTTCT	TGGCCACCTTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	22	18220878	18220889	TGGCCACCTTCT	-	DEL	BID	NM_197966.1	human	genbank	58_37c	-1	reviewed	in_frame_del	c.619_608	p.KKVA203in_frame_del	0.000:0.002:0.476:0.657:0.670:0.989:1.000:1.000:1.000:1.000:0.988:0.994	HMMPfam_BID,superfamily_SSF56854	PatternScan_BH3,HMMPfam_BID,superfamily_SSF56854	-	no_errors
BRCA1	672	genome.wustl.edu	37	17	41276047	41276047	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	17	41276047	41276047	C	-	DEL	BRCA1	NM_007294.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.67	p.E23fs	1.000	superfamily_RING/U-box	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
C15orf38	348110	genome.wustl.edu	37	15	90447196	90447196	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	15	90447196	90447196	G	A	SNP	C15orf38	NM_182616.2	human	genbank	58_37c	-1	validated	silent	c.321	p.D107	0.786	HMMPfam_UPF0552	HMMPfam_UPF0552	-	no_errors
CACNA2D2	9254	genome.wustl.edu	37	3	50402899	50402899	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	50402899	50402899	C	T	SNP	CACNA2D2	NM_001005505.1	human	genbank	58_37c	-1	reviewed	missense	c.2986	p.E996K	1.000	NULL	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Cache_1,HMMPfam_VWA_N,HMMPfam_VGCC_alpha2,superfamily_vWA-like	-	no_errors
CAD	790	genome.wustl.edu	37	2	27454419	27454419	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	2	27454419	27454419	G	C	SNP	CAD	NM_004341.3	human	genbank	58_37c	+1	reviewed	missense	c.2371	p.D791H	1.000	superfamily_CarbamoylP_synth_lsu_oligo	HMMPfam_GATase,PatternScan_DIHYDROOROTASE_1,PatternScan_DIHYDROOROTASE_2,HMMPfam_CPSase_sm_chain,superfamily_CP_synthsmall,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_D3,superfamily_CarbamoylP_synth_lsu_oligo,HMMPfam_CPSase_L_chain,PatternScan_CARBAMOYLTRANSFERASE,superfamily_Asp/Orn_carbamoyltranf,HMMPfam_OTCace,HMMPfam_OTCace_N,HMMPfam_Amidohydro_1,superfamily_Metalo_hydrolase,HMMPfam_MGS,superfamily_PreATP-grasp-like,superfamily_SSF51556,superfamily_SSF52317,superfamily_SSF52335,superfamily_SSF56059	-	no_errors
CCDC80	151887	genome.wustl.edu	37	3	112358633	112358633	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	112358633	112358633	C	A	SNP	CCDC80	NM_199511.1	human	genbank	58_37c	-1	validated	missense	c.120	p.L40F	0.002	NULL	NULL	-	no_errors
COPG	22820	genome.wustl.edu	37	3	128973853	128973853	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	128973853	128973853	G	C	SNP	COPG	NM_016128.3	human	genbank	58_37c	+1	validated	missense	c.425	p.R142P	1.000	HMMPfam_Adaptin_N,superfamily_ARM repeat	HMMPfam_Adaptin_N,superfamily_Subdomain of clathrin and coatomer appendage domain,superfamily_Clathrin adaptor appendage domain,HMMPfam_Gamma-COP,superfamily_ARM repeat	-	no_errors
CORO7	79585	genome.wustl.edu	37	16	4408084	4408084	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	16	4408084	4408084	G	A	SNP	CORO7	NM_024535.3	human	genbank	58_37c	-1	validated	silent	c.2478	p.D826	0.980	HMMPfam_DUF1900	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_DUF1900,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
CYB5R1	51706	genome.wustl.edu	37	1	202931677	202931677	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	202931677	202931677	T	A	SNP	CYB5R1	NM_016243.2	human	genbank	58_37c	-1	validated	missense	c.896	p.Q299L	0.998	superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain	HMMPfam_NAD_binding_1,HMMPfam_FAD_binding_6,superfamily_Riboflavin synthase domain-like,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain	-	no_errors
CYP3A4	1576	genome.wustl.edu	37	7	99366036	99366036	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	7	99366036	99366036	A	C	SNP	CYP3A4	NM_017460.3	human	genbank	58_37c	-1	reviewed	missense	c.611	p.V204G	0.989	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DMRTC1	63947	genome.wustl.edu	37	X	72092354	72092354	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	X	72092354	72092354	G	C	SNP	DMRTC1	NM_033053.2	human	genbank	58_37c	-1	validated	missense	c.511	p.R171G	0.000	NULL	NULL	-	no_errors
DPP4	1803	genome.wustl.edu	37	2	162849872	162849872	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	2	162849872	162849872	C	T	SNP	DPP4	NM_001935.3	human	genbank	58_37c	-1	reviewed	missense	c.2222	p.G741E	0.861	HMMPfam_Peptidase_S9,superfamily_alpha/beta-Hydrolases	HMMPfam_Peptidase_S9,HMMPfam_DPPIV_N,PatternScan_PRO_ENDOPEP_SER,superfamily_alpha/beta-Hydrolases,superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain	-	no_errors
DST	667	genome.wustl.edu	37	6	56417973	56417976	+	Frame_Shift_Del	DEL	GCAA	GCAA	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	GCAA	GCAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	6	56417973	56417976	GCAA	-	DEL	DST	NM_015548.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.7748_7745	p.I2582fs	0.028:0.010:0.010:0.069	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_Spectrin,HMMSmart_SM00054,HMMPfam_GAS2,HMMSmart_SM00243,HMMSmart_SM00150,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
DST	667	genome.wustl.edu	37	6	56417978	56417992	+	In_Frame_Del	DEL	AGAATTCTCTCCTTC	AGAATTCTCTCCTTC	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	AGAATTCTCTCCTTC	AGAATTCTCTCCTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	6	56417978	56417992	AGAATTCTCTCCTTC	-	DEL	DST	NM_015548.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.7743_7729	p.EGENS2577in_frame_del	0.000:0.122:0.124:0.015:0.045:0.096:0.200:0.999:1.000:0.000:0.001:0.000:0.000:0.033:0.129	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_Spectrin,HMMSmart_SM00054,HMMPfam_GAS2,HMMSmart_SM00243,HMMSmart_SM00150,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
ENSG00000236191	0	genome.wustl.edu	37	8	69438017	69438018	+	In_Frame_Ins	INS	-	-	TCA	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	8	69438017	69438018	-	TCA	INS	ENSG00000236191	ENST00000489168	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-69438017	NULL	1.000:1.000	-	-	-	no_coding_region:pseudogene
EPHB3	2049	genome.wustl.edu	37	3	184297496	184297496	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	184297496	184297496	G	C	SNP	EPHB3	NM_004443.3	human	genbank	58_37c	+1	reviewed	missense	c.1946	p.R649P	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP	HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_fn3,HMMSmart_FN3,PatternScan_PROTEIN_KINASE_TYR,superfamily_FN_III-like,superfamily_Gal_bind_like,superfamily_SAM_homology,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
FCRL5	83416	genome.wustl.edu	37	1	157516898	157516898	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	157516898	157516898	G	A	SNP	FCRL5	NM_031281.2	human	genbank	58_37c	-1	validated	missense	c.142	p.R48C	0.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FOXB2	442425	genome.wustl.edu	37	9	79634614	79634614	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	9	79634614	79634614	C	T	SNP	FOXB2	NM_001013735.1	human	genbank	58_37c	+1	provisional	missense	c.44	p.P15L	1.000	HMMPfam_Fork_head,HMMSmart_FH,PatternScan_FORK_HEAD_1,superfamily_SSF46785	HMMPfam_Fork_head,HMMSmart_FH,PatternScan_FORK_HEAD_1,PatternScan_FORK_HEAD_2,superfamily_SSF46785	-	no_errors
GDPD2	54857	genome.wustl.edu	37	X	69650939	69650939	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	X	69650939	69650939	C	G	SNP	GDPD2	ENST00000453994	human	ensembl	58_37c	+1	known	missense	c.1423	p.P475A	0.013	HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl	HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors
GPATCH8	23131	genome.wustl.edu	37	17	42476445	42476445	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	17	42476445	42476445	G	A	SNP	GPATCH8	NM_001002909.1	human	genbank	58_37c	-1	validated	silent	c.3000	p.S1000	0.996	NULL	HMMPfam_G-patch,HMMSmart_SM00443,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
GPT2	84706	genome.wustl.edu	37	16	46934670	46934670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	16	46934670	46934670	G	A	SNP	GPT2	NM_133443.2	human	genbank	58_37c	+1	validated	missense	c.410	p.R137Q	1.000	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	-	no_errors
GRIN2A	2903	genome.wustl.edu	37	16	9934882	9934883	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	16	9934882	9934883	-	A	INS	GRIN2A	NM_000833.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.1408_1407	p.T469fs	0.838:0.008	HMMSmart_SM00079,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like II	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
HK3	3101	genome.wustl.edu	37	5	176308510	176308510	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	5	176308510	176308510	C	T	SNP	HK3	NM_002115.2	human	genbank	58_37c	-1	reviewed	missense	c.2420	p.R807Q	1.000	HMMPfam_Hexokinase_2,superfamily_SSF53067	HMMPfam_Hexokinase_1,HMMPfam_Hexokinase_2,PatternScan_HEXOKINASES,superfamily_SSF53067	-	no_errors
ITIH2	3698	genome.wustl.edu	37	10	7769038	7769038	+	Silent	SNP	T	T	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	10	7769038	7769038	T	G	SNP	ITIH2	NM_002216.2	human	genbank	58_37c	+1	validated	silent	c.1110	p.V370	0.000	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300	HMMPfam_VWA,HMMSmart_VWA,HMMSmart_VIT,HMMPfam_ITI_HC_C,HMMPfam_VIT,superfamily_SSF53300	-	no_errors
KIAA0495	57212	genome.wustl.edu	37	1	3662660	3662660	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	3662660	3662660	G	C	SNP	KIAA0495	NM_207306.2	human	genbank	58_37c	-1	predicted	silent	c.108	p.L36	0.012	NULL	NULL	-	no_errors
KRTAP2-1	81872	genome.wustl.edu	37	17	39216302	39216303	+	Frame_Shift_Ins	INS	-	-	G	rs113441706	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	17	39216302	39216303	-	G	INS	KRTAP2-1	ENST00000391418	human	ensembl	58_37c	-1	known	frame_shift_ins	c.1_2	p.M0fs	1.000:1.000	NULL	HMMPfam_Keratin_B2	-	no_errors
LOC440292	440292	genome.wustl.edu	37	15	78237071	78237071	+	Missense_Mutation	SNP	C	A	A	rs28722697	byCluster;byFrequency;by1000genomes	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	15	78237071	78237071	C	A	SNP	LOC440292	XM_496078.4	human	genbank	58_37c	-1	model	missense	c.344	p.R115L	0.085	NULL	HMMPfam_HCaRG	-	no_errors
LOC440300	440300	genome.wustl.edu	37	15	84860207	84860207	+	RNA	SNP	C	C	G	rs142488586	by1000genomes	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	15	84860207	84860207	C	G	SNP	LOC440300	XR_078504.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.003	-	-	-	pseudogene
MASP1	5648	genome.wustl.edu	37	3	186953802	186953802	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	186953802	186953802	A	T	SNP	MASP1	NM_139125.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1857	p.Y619*	0.816	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_CCP,HMMPfam_CUB,HMMSmart_CUB,superfamily_CUB,HMMPfam_Trypsin,HMMSmart_Tryp_SPc,HMMSmart_EGF_CA,superfamily_Pept_Ser_Cys,PatternScan_EGF_2,superfamily_Complement_control_module,PatternScan_EGF_CA,PatternScan_TRYPSIN_SER,superfamily_SSF57196	-	no_errors
MDN1	23195	genome.wustl.edu	37	6	90402230	90402230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	6	90402230	90402230	G	A	SNP	MDN1	NM_014611.1	human	genbank	58_37c	-1	provisional	missense	c.10519	p.R3507C	1.000	NULL	HMMSmart_SM00327,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_vWA-like	-	no_errors
MINA	84864	genome.wustl.edu	37	3	97677945	97677945	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	97677945	97677945	C	G	SNP	MINA	NM_001042533.1	human	genbank	58_37c	-1	validated	missense	c.631	p.V211L	1.000	HMMPfam_Cupin_4,superfamily_Clavaminate synthase-like	HMMPfam_Cupin_4,superfamily_Clavaminate synthase-like	-	no_errors
MIR653	0	genome.wustl.edu	37	7	93112145	93112145	+	RNA	SNP	T	T	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	7	93112145	93112145	T	G	SNP	MIR653	ENST00000385279	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors
MYLK	4638	genome.wustl.edu	37	3	123337588	123337588	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	3	123337588	123337588	C	T	SNP	MYLK	NM_053025.3	human	genbank	58_37c	-1	reviewed	missense	c.5398	p.V1800I	0.933	NULL	HMMSmart_SM00219,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Immunoglobulin	-	no_errors
NSMCE4A	54780	genome.wustl.edu	37	10	123727171	123727171	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	10	123727171	123727171	G	C	SNP	NSMCE4A	NM_017615.2	human	genbank	58_37c	-1	validated	missense	c.652	p.L218V	1.000	HMMPfam_Nse4	HMMPfam_Nse4	-	no_errors
OR2T5	401993	genome.wustl.edu	37	1	248652151	248652151	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	248652151	248652151	G	A	SNP	OR2T5	NM_001004697.1	human	genbank	58_37c	+1	provisional	missense	c.262	p.D88N	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5AK2	390181	genome.wustl.edu	37	11	56756447	56756447	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	11	56756447	56756447	A	-	DEL	OR5AK2	NM_001005323.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.59	p.Q20fs	0.028	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5AK2	390181	genome.wustl.edu	37	11	56756448	56756448	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	11	56756448	56756448	G	C	SNP	OR5AK2	NM_001005323.1	human	genbank	58_37c	+1	provisional	missense	c.60	p.Q20H	0.000	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR8B2	26595	genome.wustl.edu	37	11	124252746	124252746	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	11	124252746	124252746	C	G	SNP	OR8B2	NM_001005468.1	human	genbank	58_37c	-1	provisional	missense	c.494	p.R165T	0.077	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OSBP2	23762	genome.wustl.edu	37	22	31302270	31302270	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	22	31302270	31302270	G	A	SNP	OSBP2	NM_030758.3	human	genbank	58_37c	+1	reviewed	missense	c.2695	p.G899S	1.000	HMMPfam_Oxysterol_BP	HMMPfam_Oxysterol_BP,HMMPfam_PH,HMMSmart_SM00233,PatternScan_OSBP,superfamily_PH domain-like	-	no_errors
OSMR	9180	genome.wustl.edu	37	5	38881757	38881757	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	5	38881757	38881757	C	G	SNP	OSMR	NM_003999.2	human	genbank	58_37c	+1	reviewed	silent	c.309	p.L103	0.128	NULL	PatternScan_HEMATOPO_REC_L_F2,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
PCDHB12	56124	genome.wustl.edu	37	5	140588586	140588586	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	5	140588586	140588586	T	C	SNP	PCDHB12	NM_018932.3	human	genbank	58_37c	+1	reviewed	missense	c.107	p.M36T	0.007	HMMPfam_Cadherin_2,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PGM2L1	283209	genome.wustl.edu	37	11	74058348	74058348	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	11	74058348	74058348	G	T	SNP	PGM2L1	NM_173582.3	human	genbank	58_37c	-1	validated	missense	c.784	p.H262N	1.000	HMMPfam_PGM_PMM_II,superfamily_Phosphoglucomutase first 3 domains	HMMPfam_PGM_PMM_I,HMMPfam_PGM_PMM_II,superfamily_Phosphoglucomutase first 3 domains,superfamily_Phosphoglucomutase C-terminal domain	-	no_errors
POLR2C	5432	genome.wustl.edu	37	16	57503883	57503883	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	16	57503883	57503883	C	T	SNP	POLR2C	NM_032940.2	human	genbank	58_37c	+1	reviewed	silent	c.450	p.I150	0.852	superfamily_RBP11-like subunits of RNA polymerase,HMMPfam_RNA_pol_L,HMMPfam_RNA_pol_A_bac,superfamily_Insert subdomain of RNA polymerase alpha subunit,HMMSmart_SM00662	PatternScan_RNA_POL_D_30KD,superfamily_RBP11-like subunits of RNA polymerase,HMMPfam_RNA_pol_L,HMMPfam_RNA_pol_A_bac,superfamily_Insert subdomain of RNA polymerase alpha subunit,HMMSmart_SM00662,PatternScan_EF_HAND_1	-	no_errors
PRKX	5613	genome.wustl.edu	37	X	3592796	3592796	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	X	3592796	3592796	A	C	SNP	PRKX	NM_005044.4	human	genbank	58_37c	-1	reviewed	missense	c.178	p.F60V	0.991	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
RBM41	55285	genome.wustl.edu	37	X	106331858	106331858	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	X	106331858	106331858	C	G	SNP	RBM41	NM_018301.3	human	genbank	58_37c	-1	validated	missense	c.735	p.Q245H	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RCN1	5954	genome.wustl.edu	37	11	32119986	32119986	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	11	32119986	32119986	T	A	SNP	RCN1	NM_002901.2	human	genbank	58_37c	+1	reviewed	missense	c.539	p.L180H	0.990	superfamily_SSF47473	PatternScan_ER_TARGET,HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
RSPH10B2	728194	genome.wustl.edu	37	7	6820477	6820477	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	7	6820477	6820477	C	T	SNP	RSPH10B2	NM_001099697.1	human	genbank	58_37c	+1	provisional	silent	c.1567	p.L523	0.929	NULL	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	-	no_errors
SCFD2	152579	genome.wustl.edu	37	4	54011747	54011747	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	4	54011747	54011747	G	A	SNP	SCFD2	NM_152540.3	human	genbank	58_37c	-1	validated	silent	c.1314	p.S438	0.974	superfamily_Sec1/munc18-like (SM) proteins	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	-	no_errors
SEC14L5	9717	genome.wustl.edu	37	16	5038173	5038173	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	16	5038173	5038173	C	T	SNP	SEC14L5	NM_014692.1	human	genbank	58_37c	+1	validated	silent	c.237	p.V79	1.000	HMMPfam_PRELI	HMMPfam_CRAL_TRIO,HMMSmart_SEC14,superfamily_CRAL_TRIO_C,HMMPfam_PRELI,HMMPfam_CRAL_TRIO_N,superfamily_Sec14p_like_N,superfamily_SSF101576	-	no_errors
SGCA	6442	genome.wustl.edu	37	17	48245822	48245822	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	17	48245822	48245822	T	A	SNP	SGCA	NM_000023.2	human	genbank	58_37c	+1	reviewed	missense	c.473	p.L158H	0.919	HMMPfam_Sarcoglycan_2	HMMSmart_SM00736,HMMPfam_Sarcoglycan_2,superfamily_Cadherin-like	-	no_errors
SNAPC3	6619	genome.wustl.edu	37	9	15451369	15451369	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	9	15451369	15451369	A	G	SNP	SNAPC3	NM_001039697.1	human	genbank	58_37c	+1	validated	missense	c.784	p.K262E	1.000	NULL	NULL	-	no_errors
SSPO	23145	genome.wustl.edu	37	7	149489529	149489529	+	Silent	SNP	C	T	T	rs190917823	by1000genomes	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	7	149489529	149489529	C	T	SNP	SSPO	ENST00000378016	human	ensembl	58_37c	+1	known	silent	c.5682	p.D1894	0.893	HMMSmart_SM00214,HMMSmart_SM00215	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,PatternScan_BPTI_KUNITZ_1,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_Galactose-binding domain-like,PatternScan_EGF_1,HMMPfam_C8,PatternScan_GLYCO_HORMONE_BETA_1,HMMPfam_TIL	-	no_errors
TLE2	7089	genome.wustl.edu	37	19	3028349	3028349	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	19	3028349	3028349	C	T	SNP	TLE2	NM_003260.4	human	genbank	58_37c	-1	validated	missense	c.154	p.E52K	1.000	HMMPfam_TLE_N	HMMSmart_WD40,HMMPfam_TLE_N,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TLR7	51284	genome.wustl.edu	37	X	12904665	12904679	+	In_Frame_Del	DEL	TCTGTCTTTCAATTT	TCTGTCTTTCAATTT	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	TCTGTCTTTCAATTT	TCTGTCTTTCAATTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	X	12904665	12904679	TCTGTCTTTCAATTT	-	DEL	TLR7	NM_016562.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1038_1052	p.LSFNF347in_frame_del	1.000:1.000:1.000:0.950:1.000:1.000:0.982:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999	superfamily_L domain-like	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
TM6SF2	53345	genome.wustl.edu	37	19	19377377	19377377	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	19	19377377	19377377	C	A	SNP	TM6SF2	NM_001001524.2	human	genbank	58_37c	-1	validated	silent	c.846	p.L282	0.999	NULL	NULL	-	no_errors
TMC3	342125	genome.wustl.edu	37	15	81625444	81625444	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	15	81625444	81625444	C	G	SNP	TMC3	NM_001080532.1	human	genbank	58_37c	-1	provisional	silent	c.2619	p.S873	0.000	NULL	HMMPfam_TMC	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7576852	7576852	+	Splice_Site	SNP	C	C	A	rs11575997	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	17	7576852	7576852	C	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	splice_site	c.993+1	e8+1	1.000	-	-	-	no_errors
TRIM67	440730	genome.wustl.edu	37	1	231344862	231344862	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	1	231344862	231344862	C	G	SNP	TRIM67	NM_001004342.3	human	genbank	58_37c	+1	validated	missense	c.1989	p.H663Q	1.000	HMMPfam_SPRY,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00449	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00502,HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_B-box zinc-binding domain,superfamily_RING/U-box	-	no_errors
TRPA1	8989	genome.wustl.edu	37	8	72959429	72959449	+	Frame_Shift_Del	DEL	AAATCTAAAAGTACCTTTGAA	AAATCTAAAAGTACCTTTGAA	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	AAATCTAAAAGTACCTTTGAA	AAATCTAAAAGTACCTTTGAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	8	72959429	72959449	AAATCTAAAAGTACCTTTGAA	-	DEL	TRPA1	NM_007332.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1919_1906	p.V636fs	0.379:0.767:0.987:1.000:1.000:1.000:1.000:0.995:0.995:0.996:0.952:0.180:0.724:0.761	superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,PatternScan_EF_HAND_1	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179613845	179613845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	2	179613845	179613845	A	G	SNP	TTN	NM_133379.3	human	genbank	58_37c	-1	reviewed	missense	c.13282	p.S4428P	0.000	NULL	PatternScan_THIOL_PROTEASE_HIS,PatternScan_IG_MHC,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,superfamily_SSF48726	-	no_errors
UNC5D	137970	genome.wustl.edu	37	8	35608205	35608205	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	8	35608205	35608205	G	T	SNP	UNC5D	NM_080872.2	human	genbank	58_37c	+1	validated	nonsense	c.2041	p.E681*	1.000	NULL	PatternScan_SERPIN,HMMPfam_Death,HMMSmart_SM00005,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_ZU5,HMMSmart_SM00218,HMMSmart_SM00408,HMMSmart_SM00409,superfamily_DEATH domain,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
USP43	124739	genome.wustl.edu	37	17	9586235	9586236	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	17	9586235	9586236	CT	-	DEL	USP43	NM_153210.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.1201_1202	p.F402fs	1.000:1.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
WDR45	11152	genome.wustl.edu	37	X	48932526	48932526	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	X	48932526	48932526	T	C	SNP	WDR45	NM_007075.3	human	genbank	58_37c	-1	reviewed	missense	c.1022	p.D341G	1.000	NULL	HMMSmart_WD40,superfamily_WD40_like	-	no_errors
XPO6	23214	genome.wustl.edu	37	16	28187312	28187312	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	16	28187312	28187312	G	T	SNP	XPO6	NM_015171.2	human	genbank	58_37c	-1	provisional	nonsense	c.312	p.Y104*	1.000	HMMPfam_Xpo1,superfamily_ARM repeat	HMMPfam_IBN_N,HMMPfam_Xpo1,superfamily_ARM repeat	-	no_errors
ZNF345	25850	genome.wustl.edu	37	19	37368936	37368936	+	Missense_Mutation	SNP	G	G	C	rs149256110	unknown	TCGA-B6-A0X1-01A-11D-A10G-09	TCGA-B6-A0X1-10A-01D-A117-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a492abf9-0cd3-402c-89e2-c49d650ef540	8c39f4bf-c997-41a9-8b36-37e9e9e6124b	19	37368936	37368936	G	C	SNP	ZNF345	NM_003419.3	human	genbank	58_37c	+1	provisional	missense	c.1204	p.E402Q	0.481	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
