Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABL1	25	genome.wustl.edu	37	9	133755477	133755477	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	9	133755477	133755477	C	A	SNP	ABL1	NM_007313.2	human	genbank	58_37c	+1	reviewed	missense	c.1503	p.D501E	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_F_actin_bind,HMMSmart_SM00808,PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
ADAMTS18	170692	genome.wustl.edu	37	16	77389899	77389903	+	Frame_Shift_Del	DEL	GGTCA	GGTCA	-	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	GGTCA	GGTCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	16	77389899	77389903	GGTCA	-	DEL	ADAMTS18	NM_199355.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1398_1394	p.L465fs	0.000:0.961:0.996:0.994:1.000	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AFF2	2334	genome.wustl.edu	37	X	147743942	147743942	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	147743942	147743942	G	T	SNP	AFF2	NM_002025.3	human	genbank	58_37c	+1	reviewed	nonsense	c.694	p.E232*	1.000	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
ATXN1	6310	genome.wustl.edu	37	6	16328222	16328222	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	6	16328222	16328222	G	A	SNP	ATXN1	NM_000332.3	human	genbank	58_37c	-1	reviewed	missense	c.320	p.A107V	0.998	NULL	HMMSmart_SM00536,HMMPfam_AXH,superfamily_AXH domain	-	no_errors
C4orf10	317648	genome.wustl.edu	37	4	2952750	2952750	+	RNA	SNP	C	C	G	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	4	2952750	2952750	C	G	SNP	C4orf10	NR_015453.1	human	genbank	58_37c	+1	predicted	rna	NULL	NULL	0.004	-	-	-	no_errors
CSMD2	114784	genome.wustl.edu	37	1	34042946	34042946	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	1	34042946	34042946	C	T	SNP	CSMD2	NM_052896.3	human	genbank	58_37c	-1	validated	missense	c.7532	p.R2511Q	1.000	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,PatternScan_GLYCOSYL_HYDROL_F10,PatternScan_IG_MHC,superfamily_Complement control module/SCR domain	-	no_errors
DMD	1756	genome.wustl.edu	37	X	32662397	32662397	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	32662397	32662397	G	A	SNP	DMD	NM_004006.2	human	genbank	58_37c	-1	reviewed	missense	c.1183	p.R395W	0.989	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,superfamily_Prefoldin,superfamily_t-snare proteins,HMMPfam_efhand_1,HMMPfam_efhand_2,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
FAT3	120114	genome.wustl.edu	37	11	92531859	92531859	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	11	92531859	92531859	C	T	SNP	FAT3	NM_001008781.2	human	genbank	58_37c	+1	validated	silent	c.5680	p.L1894	0.833	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
GIMAP8	155038	genome.wustl.edu	37	7	150164402	150164402	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	7	150164402	150164402	A	G	SNP	GIMAP8	NM_175571.2	human	genbank	58_37c	+1	reviewed	missense	c.616	p.T206A	0.000	HMMPfam_AIG1	HMMPfam_AIG1,superfamily_SSF52540	-	no_errors
GPI	2821	genome.wustl.edu	37	19	34870465	34870465	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	19	34870465	34870465	A	G	SNP	GPI	NM_000175.3	human	genbank	58_37c	+1	reviewed	missense	c.748	p.T250A	1.000	HMMPfam_PGI,superfamily_SSF53697	HMMPfam_PGI,PatternScan_P_GLUCOSE_ISOMERASE_2,PatternScan_P_GLUCOSE_ISOMERASE_1,superfamily_SSF53697	-	no_errors
KCNT1	57582	genome.wustl.edu	37	9	138683996	138683997	+	Frame_Shift_Del	DEL	AC	AC	-	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	9	138683996	138683997	AC	-	DEL	KCNT1	NM_020822.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.3760_3761	p.Q1255fs	1.000:1.000	NULL	HMMPfam_BK_channel_a,HMMPfam_Ion_trans_2,superfamily_NAD(P)-bd,superfamily_SSF81324	-	no_errors
KIF4A	24137	genome.wustl.edu	37	X	69623828	69623828	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	X	69623828	69623828	A	T	SNP	KIF4A	NM_012310.4	human	genbank	58_37c	+1	reviewed	missense	c.2734	p.I912L	1.000	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LPIN2	9663	genome.wustl.edu	37	18	2939590	2939594	+	Frame_Shift_Del	DEL	TGGGG	TGGGG	-	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	TGGGG	TGGGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	18	2939590	2939594	TGGGG	-	DEL	LPIN2	NM_014646.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.710_706	p.P236fs	0.487:0.458:0.340:0.320:0.041	NULL	HMMPfam_Lipin_N,HMMPfam_LNS2,HMMSmart_LNS2,superfamily_SSF56784	-	no_errors
MKRN3	7681	genome.wustl.edu	37	15	23811294	23811294	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	15	23811294	23811294	C	T	SNP	MKRN3	NM_005664.3	human	genbank	58_37c	+1	reviewed	missense	c.365	p.S122F	0.000	NULL	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
MMP27	64066	genome.wustl.edu	37	11	102575447	102575447	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	11	102575447	102575447	C	G	SNP	MMP27	NM_022122.2	human	genbank	58_37c	-1	reviewed	missense	c.162	p.K54N	0.006	HMMPfam_PG_binding_1,superfamily_PGBD-like	"superfamily_Hemopexin-like domain,HMMPfam_Peptidase_M10,PatternScan_CYSTEINE_SWITCH,HMMPfam_PG_binding_1,superfamily_PGBD-like,PatternScan_ZINC_PROTEASE,HMMSmart_SM00235,PatternScan_HEMOPEXIN,HMMPfam_Hemopexin,HMMSmart_SM00120,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
NLRP7	199713	genome.wustl.edu	37	19	55450913	55450913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	19	55450913	55450913	G	A	SNP	NLRP7	NM_001127255.1	human	genbank	58_37c	-1	reviewed	missense	c.1274	p.A425V	0.000	NULL	HMMSmart_SM00368,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH domain,superfamily_RNI-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NOS1	4842	genome.wustl.edu	37	12	117723956	117723956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	12	117723956	117723956	G	A	SNP	NOS1	NM_000620.2	human	genbank	58_37c	-1	reviewed	missense	c.1243	p.R415W	0.997	HMMPfam_NO_synthase,superfamily_Nitric oxide (NO) synthase oxygenase domain	HMMPfam_NAD_binding_1,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_FAD_binding_1,HMMPfam_NO_synthase,PatternScan_NOS,superfamily_Nitric oxide (NO) synthase oxygenase domain,HMMPfam_Flavodoxin_1,superfamily_Riboflavin synthase domain-like,superfamily_Flavoproteins,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain	-	no_errors
OR2V2	285659	genome.wustl.edu	37	5	180582416	180582416	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	180582416	180582416	G	C	SNP	OR2V2	NM_206880.1	human	genbank	58_37c	+1	provisional	missense	c.474	p.L158F	0.347	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDHGB3	56102	genome.wustl.edu	37	5	140750987	140750987	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	140750987	140750987	C	A	SNP	PCDHGB3	NM_018924.2	human	genbank	58_37c	+1	reviewed	missense	c.1026	p.D342E	1.000	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDHGB3	56102	genome.wustl.edu	37	5	140751317	140751317	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	140751317	140751317	C	T	SNP	PCDHGB3	NM_018924.2	human	genbank	58_37c	+1	reviewed	silent	c.1356	p.F452	0.913	superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PRKRA	8575	genome.wustl.edu	37	2	179300974	179300974	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	179300974	179300974	A	T	SNP	PRKRA	NM_003690.4	human	genbank	58_37c	-1	reviewed	missense	c.682	p.L228I	0.998	superfamily_dsRNA-binding domain-like	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	-	no_errors
RLF	6018	genome.wustl.edu	37	1	40654738	40654738	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	1	40654738	40654738	A	G	SNP	RLF	NM_012421.3	human	genbank	58_37c	+1	validated	silent	c.249	p.Q83	0.998	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
RPL29	6159	genome.wustl.edu	37	3	52027853	52027854	+	In_Frame_Ins	INS	-	-	CCTTGG	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-11B-21W-A100-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	bcb878fe-26c0-462a-83db-a6a586a25534	3	52027853	52027854	-	CCTTGG	INS	RPL29	NM_000992.2	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.392_391	p.131in_frame_insAK	0.127:0.483	NULL	HMMPfam_Ribosomal_L29e	-	no_errors
SCN2A	6326	genome.wustl.edu	37	2	166246050	166246050	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	166246050	166246050	A	T	SNP	SCN2A	NM_001040142.1	human	genbank	58_37c	+1	reviewed	missense	c.5734	p.I1912F	1.000	HMMPfam_IQ,HMMSmart_SM00015	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SEPHS1	22929	genome.wustl.edu	37	10	13386865	13386865	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	10	13386865	13386865	G	A	SNP	SEPHS1	NM_012247.3	human	genbank	58_37c	-1	reviewed	missense	c.86	p.T29I	1.000	NULL	HMMPfam_AIRS,HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like,superfamily_PurM N-terminal domain-like	-	no_errors
SLC1A4	6509	genome.wustl.edu	37	2	65245352	65245352	+	Silent	SNP	G	G	A	rs34416635	byCluster;byFrequency;by1000genomes	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	65245352	65245352	G	A	SNP	SLC1A4	NM_003038.3	human	genbank	58_37c	+1	validated	silent	c.1182	p.A394	0.985	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_2	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_1,PatternScan_NA_DICARBOXYL_SYMP_2	-	no_errors
SNCAIP	9627	genome.wustl.edu	37	5	121786792	121786792	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	5	121786792	121786792	C	A	SNP	SNCAIP	NM_005460.2	human	genbank	58_37c	+1	reviewed	silent	c.2250	p.P750	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
TFAP2C	7022	genome.wustl.edu	37	20	55208476	55208476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	20	55208476	55208476	G	A	SNP	TFAP2C	NM_003222.3	human	genbank	58_37c	+1	reviewed	missense	c.654	p.M218I	0.994	NULL	HMMPfam_TF_AP-2	-	no_errors
TMEM106B	54664	genome.wustl.edu	37	7	12258148	12258148	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	7	12258148	12258148	G	A	SNP	TMEM106B	NM_001134232.1	human	genbank	58_37c	+1	validated	splice_site	c.281+1	e2+1	1.000	-	-	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578203	7578203	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	17	7578203	7578203	C	T	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.646	p.V216M	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
UNC13C	440279	genome.wustl.edu	37	15	54306670	54306670	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	15	54306670	54306670	A	G	SNP	UNC13C	NM_001080534.1	human	genbank	58_37c	+1	provisional	missense	c.1570	p.T524A	0.934	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_C2_CaLB,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD,superfamily_SSF57889	-	no_errors
VWF	7450	genome.wustl.edu	37	12	6134806	6134806	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	12	6134806	6134806	C	A	SNP	VWF	NM_000552.3	human	genbank	58_37c	-1	reviewed	silent	c.3162	p.T1054	0.587	HMMPfam_C8	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_VWA,HMMSmart_SM00327,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL,superfamily_vWA-like	-	no_errors
ZEB2	9839	genome.wustl.edu	37	2	145147116	145147116	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B3-01A-11W-A071-09	TCGA-BH-A0B3-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8f4504db-45d9-4873-9532-69ad466fdf2f	14a2a9bb-b4d3-4402-81b7-34d2bd314e4b	2	145147116	145147116	C	T	SNP	ZEB2	NM_014795.3	human	genbank	58_37c	-1	reviewed	missense	c.3547	p.E1183K	1.000	NULL	HMMSmart_HOX,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1,superfamily_SSF57667	-	no_errors
