Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACYP1	97	genome.wustl.edu	37	14	75520314	75520314	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	75520314	75520314	G	A	SNP	ACYP1	NM_001107.3	human	genbank	58_37c	-1	reviewed	missense	c.133	p.R45W	0.994	HMMPfam_Acylphosphatase,superfamily_Acylphosphatase-like,PatternScan_ACYLPHOSPHATASE_2	HMMPfam_Acylphosphatase,superfamily_Acylphosphatase-like,PatternScan_ACYLPHOSPHATASE_1,PatternScan_ACYLPHOSPHATASE_2	-	no_errors
AIDA	64853	genome.wustl.edu	37	1	222876531	222876531	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	222876531	222876531	G	A	SNP	AIDA	NM_022831.2	human	genbank	58_37c	-1	validated	nonsense	c.139	p.Q47*	1.000	HMMPfam_DUF1855,superfamily_Domain from hypothetical 2610208m17rik protein	HMMPfam_DUF1855,superfamily_Domain from hypothetical 2610208m17rik protein	-	no_errors
AKR1B1	231	genome.wustl.edu	37	7	134135680	134135680	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	7	134135680	134135680	A	T	SNP	AKR1B1	ENST00000426422	human	ensembl	58_37c	-1	known	missense	c.264	p.D88E	0.000	NULL	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase,PatternScan_ALDOKETO_REDUCTASE_1	-	no_errors
ALPK2	115701	genome.wustl.edu	37	18	56203789	56203789	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	18	56203789	56203789	G	A	SNP	ALPK2	NM_052947.3	human	genbank	58_37c	-1	validated	silent	c.3630	p.N1210	0.000	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
ANKH	56172	genome.wustl.edu	37	5	14758638	14758638	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	14758638	14758638	G	A	SNP	ANKH	NM_054027.4	human	genbank	58_37c	-1	reviewed	missense	c.383	p.T128M	1.000	HMMPfam_ANKH	HMMPfam_ANKH	-	no_errors
APOBEC3G	60489	genome.wustl.edu	37	22	39475005	39475005	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	22	39475005	39475005	G	A	SNP	APOBEC3G	NM_021822.2	human	genbank	58_37c	+1	reviewed	missense	c.86	p.R29H	0.000	HMMPfam_APOBEC_N	HMMPfam_APOBEC_C,HMMPfam_APOBEC_N,PatternScan_CYT_DCMP_DEAMINASES,superfamily_Cytidine deaminase-like	-	no_errors
ARHGAP36	0	genome.wustl.edu	37	X	130218365	130218365	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	X	130218365	130218365	A	G	SNP	ARHGAP36	NM_144967.3	human	genbank	58_37c	+1	validated	silent	c.732	p.Q244	0.004	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
ATG2B	55102	genome.wustl.edu	37	14	96792113	96792113	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	96792113	96792113	C	G	SNP	ATG2B	NM_018036.5	human	genbank	58_37c	-1	validated	missense	c.2310	p.W770C	1.000	NULL	HMMPfam_ATG_C	-	no_errors
C14orf80	283643	genome.wustl.edu	37	14	105958575	105958575	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	105958575	105958575	C	G	SNP	C14orf80	NM_001134875.1	human	genbank	58_37c	+1	validated	missense	c.358	p.R120G	0.002	NULL	NULL	-	no_errors
CCDC19	25790	genome.wustl.edu	37	1	159846491	159846491	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	159846491	159846491	G	A	SNP	CCDC19	NM_012337.2	human	genbank	58_37c	-1	validated	missense	c.1207	p.R403C	1.000	NULL	NULL	-	no_errors
CDH26	60437	genome.wustl.edu	37	20	58563973	58563973	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	20	58563973	58563973	G	C	SNP	CDH26	NM_177980.2	human	genbank	58_37c	+1	reviewed	missense	c.1038	p.E346D	0.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CNOT3	4849	genome.wustl.edu	37	19	54647208	54647208	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	19	54647208	54647208	G	A	SNP	CNOT3	NM_014516.2	human	genbank	58_37c	+1	validated	missense	c.124	p.E42K	1.000	HMMPfam_Not3	HMMPfam_Not3,HMMPfam_NOT2_3_5	-	no_errors
COL4A6	1288	genome.wustl.edu	37	X	107412837	107412837	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	X	107412837	107412837	G	A	SNP	COL4A6	NM_001847.2	human	genbank	58_37c	-1	reviewed	silent	c.3582	p.T1194	0.008	NULL	HMMPfam_C4,HMMSmart_SM00111,HMMPfam_Collagen,superfamily_C-type lectin-like	-	no_errors
DEFB131	644414	genome.wustl.edu	37	4	9452156	9452156	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	4	9452156	9452156	T	C	SNP	DEFB131	NM_001040448.2	human	genbank	58_37c	+1	validated	silent	c.129	p.D43	0.767	NULL	NULL	-	no_errors
EIF3A	8661	genome.wustl.edu	37	10	120795555	120795555	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	10	120795555	120795555	C	T	SNP	EIF3A	NM_003750.2	human	genbank	58_37c	-1	validated	missense	c.4145	p.R1382H	1.000	NULL	HMMPfam_PCI,HMMSmart_SM00088	-	no_errors
ENSG00000181250	0	genome.wustl.edu	37	2	33952282	33952282	+	Silent	SNP	G	G	A	rs149035002	by1000genomes	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	2	33952282	33952282	G	A	SNP	ENSG00000181250	ENST00000322472	human	ensembl	58_37c	-1	known	silent	c.561	p.N187	0.810	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_errors
FAM127B	26071	genome.wustl.edu	37	X	134185956	134185956	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	X	134185956	134185956	G	A	SNP	FAM127B	NM_001078172.1	human	genbank	58_37c	-1	validated	silent	c.183	p.D61	0.304	NULL	NULL	-	no_errors
FAM169A	26049	genome.wustl.edu	37	5	74078857	74078857	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	74078857	74078857	C	A	SNP	FAM169A	NM_015566.1	human	genbank	58_37c	-1	validated	nonsense	c.1363	p.E455*	1.000	NULL	NULL	-	no_errors
FAM98A	25940	genome.wustl.edu	37	2	33809886	33809886	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	2	33809886	33809886	T	G	SNP	FAM98A	NM_015475.3	human	genbank	58_37c	-1	validated	missense	c.1514	p.Y505S	1.000	NULL	HMMPfam_DUF2465	-	no_errors
FANCA	2175	genome.wustl.edu	37	16	89805935	89805937	+	In_Frame_Del	DEL	GGA	GGA	-	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	GGA	GGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	16	89805935	89805937	GGA	-	DEL	FANCA	NM_000135.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.3961_3959	p.L1320in_frame_del	0.004:0.022:0.022	NULL	HMMPfam_Fanconi_A	-	no_errors
FER	2241	genome.wustl.edu	37	5	108290582	108290582	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	108290582	108290582	T	C	SNP	FER	NM_005246.2	human	genbank	58_37c	+1	reviewed	silent	c.1482	p.L494	1.000	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_FCH,HMMSmart_SM00055,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
GRIK1	2897	genome.wustl.edu	37	21	30934056	30934056	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	21	30934056	30934056	C	T	SNP	GRIK1	NM_000830.3	human	genbank	58_37c	-1	reviewed	missense	c.2245	p.A749T	1.000	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
JMJD1C	221037	genome.wustl.edu	37	10	64974081	64974081	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	10	64974081	64974081	G	A	SNP	JMJD1C	NM_032776.1	human	genbank	58_37c	-1	validated	nonsense	c.1846	p.R616*	1.000	NULL	HMMSmart_SM00558,HMMPfam_JmjC,superfamily_Clavaminate synthase-like	-	no_errors
KIAA1751	85452	genome.wustl.edu	37	1	1902246	1902246	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	1902246	1902246	G	A	SNP	KIAA1751	NM_001080484.1	human	genbank	58_37c	-1	predicted	missense	c.898	p.R300W	0.918	NULL	NULL	-	no_errors
KLHL4	56062	genome.wustl.edu	37	X	86872933	86872933	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	X	86872933	86872933	A	G	SNP	KLHL4	NM_057162.2	human	genbank	58_37c	+1	reviewed	splice_site	c.728-2	e4-2	1.000	-	-	-	no_errors
LOC100131360	0	genome.wustl.edu	37	3	195723586	195723586	+	RNA	SNP	G	G	A	rs56022806	byCluster;byFrequency;by1000genomes	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	3	195723586	195723586	G	A	SNP	LOC100131360	XR_037733.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.967	-	-	-	pseudogene
LOC100132108	0	genome.wustl.edu	37	1	155815532	155815532	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	1	155815532	155815532	G	A	SNP	LOC100132108	XM_001725162.1	human	genbank	58_37c	+1	model	missense	c.235	p.D79N	1.000	NULL	HMMPfam_Mov34	-	pseudogene
MAML2	84441	genome.wustl.edu	37	11	96074719	96074719	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	11	96074719	96074719	G	A	SNP	MAML2	NM_032427.1	human	genbank	58_37c	-1	validated	missense	c.341	p.A114V	0.000	NULL	HMMPfam_MamL-1	-	no_errors
MEOX2	4223	genome.wustl.edu	37	7	15652133	15652133	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	7	15652133	15652133	C	T	SNP	MEOX2	NM_005924.4	human	genbank	58_37c	-1	reviewed	missense	c.794	p.G265E	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9062672	9062672	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	19	9062672	9062672	G	T	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	silent	c.24774	p.S8258	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
MYBBP1A	10514	genome.wustl.edu	37	17	4442756	4442756	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	17	4442756	4442756	C	T	SNP	MYBBP1A	NM_001105538.1	human	genbank	58_37c	-1	validated	missense	c.3941	p.S1314N	0.000	NULL	HMMPfam_DNA_pol_phi,superfamily_ARM-type_fold	-	no_errors
MYRIP	25924	genome.wustl.edu	37	3	40192554	40192554	+	Missense_Mutation	SNP	A	A	T	rs111363654	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	3	40192554	40192554	A	T	SNP	MYRIP	NM_015460.2	human	genbank	58_37c	+1	validated	missense	c.348	p.Q116H	1.000	superfamily_FYVE_PHD_ZnF	HMMPfam_MOBP,superfamily_FYVE_PHD_ZnF	-	no_errors
NEK6	10783	genome.wustl.edu	37	9	127089686	127089686	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	9	127089686	127089686	G	A	SNP	NEK6	NM_001145001.2	human	genbank	58_37c	+1	reviewed	missense	c.686	p.R229H	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NEK9	91754	genome.wustl.edu	37	14	75551376	75551376	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	14	75551376	75551376	G	A	SNP	NEK9	NM_033116.4	human	genbank	58_37c	-1	validated	missense	c.2831	p.S944F	1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_1,PatternScan_RCC1_2,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_RCC1/BLIP-II,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
OXGR1	27199	genome.wustl.edu	37	13	97639726	97639726	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	13	97639726	97639726	G	A	SNP	OXGR1	NM_080818.3	human	genbank	58_37c	-1	reviewed	silent	c.288	p.G96	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PIWIL2	55124	genome.wustl.edu	37	8	22136963	22136963	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	8	22136963	22136963	G	A	SNP	PIWIL2	NM_001135721.1	human	genbank	58_37c	+1	validated	missense	c.64	p.V22I	0.048	NULL	HMMPfam_PAZ,HMMPfam_Piwi,superfamily_Ribonuclease H-like,superfamily_PAZ domain	-	no_errors
PLIN1	5346	genome.wustl.edu	37	15	90212738	90212738	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	15	90212738	90212738	A	T	SNP	PLIN1	NM_001145311.1	human	genbank	58_37c	-1	reviewed	missense	c.764	p.V255E	0.933	HMMPfam_Perilipin	HMMPfam_Perilipin	-	no_errors
PLXDC2	84898	genome.wustl.edu	37	10	20357104	20357104	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	10	20357104	20357104	G	T	SNP	PLXDC2	NM_032812.7	human	genbank	58_37c	+1	provisional	silent	c.477	p.V159	1.000	NULL	HMMPfam_PSI,HMMSmart_SM00423	-	no_errors
RCOR2	283248	genome.wustl.edu	37	11	63683048	63683048	+	Missense_Mutation	SNP	C	C	A	rs143904903	by1000genomes	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	11	63683048	63683048	C	A	SNP	RCOR2	NM_173587.3	human	genbank	58_37c	-1	validated	missense	c.163	p.V55L	0.931	HMMPfam_ELM2	HMMPfam_ELM2,HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_Myb_DNA-binding	-	no_errors
ROR2	4920	genome.wustl.edu	37	9	94487328	94487328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	9	94487328	94487328	C	T	SNP	ROR2	NM_004560.2	human	genbank	58_37c	-1	reviewed	missense	c.1448	p.R483Q	0.981	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMPfam_Kringle,HMMSmart_KR,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMSmart_IGc2,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_I-set,superfamily_Kringle-like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_KRINGLE_1,HMMPfam_Fz,superfamily_SSF48726	-	no_errors
SNORD42B	0	genome.wustl.edu	37	17	27047625	27047625	+	RNA	SNP	A	A	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	17	27047625	27047625	A	G	SNP	SNORD42B	NR_000013.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.944	-	-	-	no_errors
TMEM132D	121256	genome.wustl.edu	37	12	129559467	129559467	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	12	129559467	129559467	G	T	SNP	TMEM132D	NM_133448.2	human	genbank	58_37c	-1	validated	missense	c.2253	p.F751L	0.882	NULL	NULL	-	no_errors
TRPC7	57113	genome.wustl.edu	37	5	135587470	135587470	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	5	135587470	135587470	G	A	SNP	TRPC7	ENST00000378459	human	ensembl	58_37c	-1	known	missense	c.1261	p.R421C	0.992	HMMPfam_Ion_trans	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,HMMPfam_TRP_2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ZNF391	346157	genome.wustl.edu	37	6	27368399	27368399	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18L-01A-32D-A12B-09	TCGA-BH-A18L-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	883cd3c9-2681-4822-8b22-29149a027514	dc231f7a-c0b8-4639-9885-06ec9a0405a0	6	27368399	27368399	C	G	SNP	ZNF391	NM_001076781.1	human	genbank	58_37c	+1	validated	missense	c.250	p.P84A	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
