Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA5	23461	genome.wustl.edu	37	17	67282161	67282161	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	67282161	67282161	T	C	SNP	ABCA5	NM_018672.3	human	genbank	58_37c	-1	reviewed	missense	c.2150	p.Y717C	0.003	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANK3	288	genome.wustl.edu	37	10	61819641	61819641	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	10	61819641	61819641	G	C	SNP	ANK3	NM_001149.2	human	genbank	58_37c	-1	reviewed	missense	c.2282	p.P761R	1.000	NULL	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_ZU5,HMMSmart_ZU5,superfamily_DEATH_like	-	no_errors
C11orf53	341032	genome.wustl.edu	37	11	111156467	111156467	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	111156467	111156467	G	A	SNP	C11orf53	NM_198498.1	human	genbank	58_37c	+1	predicted	silent	c.399	p.T133	0.008	NULL	NULL	-	no_errors
CACNA2D3	55799	genome.wustl.edu	37	3	54786629	54786629	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	3	54786629	54786629	C	T	SNP	CACNA2D3	NM_018398.2	human	genbank	58_37c	+1	reviewed	missense	c.1171	p.R391C	1.000	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Cache_1,HMMPfam_VWA_N,superfamily_vWA-like	-	no_errors
CENPE	1062	genome.wustl.edu	37	4	104059573	104059573	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	4	104059573	104059573	T	C	SNP	CENPE	NM_001813.2	human	genbank	58_37c	-1	validated	missense	c.6238	p.R2080G	0.000	NULL	PatternScan_AA_TRNA_LIGASE_I,HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
COL4A5	1287	genome.wustl.edu	37	X	107814670	107814670	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	X	107814670	107814670	G	T	SNP	COL4A5	NM_033380.1	human	genbank	58_37c	+1	reviewed	missense	c.412	p.G138C	1.000	HMMPfam_Collagen	HMMPfam_C4,HMMSmart_C4,HMMPfam_Collagen,superfamily_C-type_lectin_fold	-	no_errors
COPS3	8533	genome.wustl.edu	37	17	17163709	17163709	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	17163709	17163709	T	C	SNP	COPS3	NM_003653.2	human	genbank	58_37c	-1	reviewed	missense	c.842	p.K281R	1.000	HMMPfam_PCI	"HMMPfam_PCI,HMMSmart_SM00088,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
CPB2	1361	genome.wustl.edu	37	13	46629931	46629931	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	13	46629931	46629931	G	T	SNP	CPB2	NM_001872.3	human	genbank	58_37c	-1	reviewed	silent	c.1053	p.T351	0.007	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases	HMMPfam_Peptidase_M14,HMMSmart_SM00631,HMMPfam_Propep_M14,superfamily_Protease propeptides/inhibitors,superfamily_Zn-dependent exopeptidases	-	no_errors
CRHR1	1394	genome.wustl.edu	37	17	43906585	43906585	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	43906585	43906585	A	C	SNP	CRHR1	NM_001145146.1	human	genbank	58_37c	+1	reviewed	missense	c.332	p.K111T	1.000	HMMSmart_SM00008,superfamily_Hormone receptor domain (HRM Pfam 02793)	HMMPfam_7tm_2,HMMPfam_HRM,HMMSmart_SM00008,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_Hormone receptor domain (HRM Pfam 02793),superfamily_Family A G protein-coupled receptor-like	-	no_errors
CSMD1	64478	genome.wustl.edu	37	8	3057330	3057330	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	8	3057330	3057330	C	T	SNP	CSMD1	NM_033225.5	human	genbank	58_37c	-1	validated	silent	c.5103	p.G1701	0.632	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,PatternScan_GLYCOSYL_HYDROL_F10,superfamily_Complement control module/SCR domain	-	no_errors
DAP3	7818	genome.wustl.edu	37	1	155701787	155701787	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	1	155701787	155701787	C	A	SNP	DAP3	NM_004632.2	human	genbank	58_37c	+1	reviewed	missense	c.956	p.P319H	0.977	HMMPfam_DAP3	HMMPfam_DAP3	-	no_errors
DKK2	27123	genome.wustl.edu	37	4	107845202	107845202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	4	107845202	107845202	C	T	SNP	DKK2	NM_014421.2	human	genbank	58_37c	-1	reviewed	missense	c.689	p.R230H	1.000	NULL	HMMPfam_Dickkopf_N	-	no_errors
DNHD1	144132	genome.wustl.edu	37	11	6561187	6561187	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	6561187	6561187	C	T	SNP	DNHD1	NM_144666.2	human	genbank	58_37c	+1	provisional	missense	c.3502	p.R1168C	1.000	superfamily_Ferritin-like,HMMPfam_DHC_N2	HMMPfam_Dynein_heavy,superfamily_Ferritin-like,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DUOX1	53905	genome.wustl.edu	37	15	45444508	45444508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	15	45444508	45444508	C	T	SNP	DUOX1	NM_017434.3	human	genbank	58_37c	+1	reviewed	missense	c.3218	p.T1073M	0.001	NULL	HMMPfam_An_peroxidase,HMMSmart_SM00054,superfamily_Heme-dependent peroxidases,HMMPfam_FAD_binding_8,HMMPfam_NAD_binding_6,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain	-	no_errors
ENG	2022	genome.wustl.edu	37	9	130605471	130605471	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	9	130605471	130605471	C	T	SNP	ENG	NM_001114753.1	human	genbank	58_37c	-1	reviewed	missense	c.121	p.E41K	0.009	NULL	HMMPfam_Zona_pellucida	-	no_errors
ENSG00000246636	0	genome.wustl.edu	37	6	90353940	90353940	+	RNA	SNP	G	G	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	6	90353940	90353940	G	C	SNP	MDN1	NM_014611.1	human	genbank	58_37c	-1	provisional	intronic	c.16603-28	e102-28	0.000	-	-	-	no_errors
GATA3	2625	genome.wustl.edu	37	10	8115873	8115874	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	10	8115873	8115874	-	C	INS	GATA3	NM_001002295.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1222_1223	p.P409fs	0.876:0.903	NULL	HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
GNG5P2	0	genome.wustl.edu	37	X	109590120	109590120	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	X	109590120	109590120	G	A	SNP	GNG5P2	ENST00000372054	human	ensembl	58_37c	-1	known	silent	c.18	p.S6	0.998	superfamily_Transducin (heterotrimeric G protein) gamma chain	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain	-	no_errors
GOLGA1	2800	genome.wustl.edu	37	9	127683437	127683437	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	9	127683437	127683437	T	C	SNP	GOLGA1	NM_002077.3	human	genbank	58_37c	-1	reviewed	missense	c.814	p.I272V	0.988	NULL	HMMPfam_GRIP,HMMSmart_SM00755,superfamily_Prefoldin	-	no_errors
GPR84	53831	genome.wustl.edu	37	12	54757355	54757355	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	12	54757355	54757355	C	A	SNP	GPR84	NM_020370.2	human	genbank	58_37c	-1	validated	missense	c.281	p.R94M	0.991	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GUF1	60558	genome.wustl.edu	37	4	44682858	44682858	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	4	44682858	44682858	C	G	SNP	GUF1	NM_021927.2	human	genbank	58_37c	+1	validated	missense	c.425	p.P142R	1.000	HMMPfam_GTP_EFTU,superfamily_SSF52540	HMMPfam_EFG_C,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,HMMPfam_GTP_EFTU_D2,superfamily_Translat_factor,superfamily_EFG_III_V,HMMPfam_LepA_C,superfamily_SSF52540	-	no_errors
HFE	3077	genome.wustl.edu	37	6	26093039	26093039	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	6	26093039	26093039	C	G	SNP	HFE	NM_000410.3	human	genbank	58_37c	+1	reviewed	missense	c.743	p.A248G	0.741	HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin	HMMPfam_MHC_I,PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_SM00407,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin	-	no_errors
KBTBD4	55709	genome.wustl.edu	37	11	47594816	47594816	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	47594816	47594816	T	C	SNP	KBTBD4	NM_018095.4	human	genbank	58_37c	-1	validated	missense	c.1271	p.D424G	1.000	HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain	HMMSmart_SM00225,HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_Kelch_2,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KIAA1407	57577	genome.wustl.edu	37	3	113721362	113721362	+	Nonsense_Mutation	SNP	G	G	A	rs144435002	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	3	113721362	113721362	G	A	SNP	KIAA1407	NM_020817.1	human	genbank	58_37c	-1	predicted	nonsense	c.2002	p.R668*	1.000	NULL	NULL	-	no_errors
KIF26B	55083	genome.wustl.edu	37	1	245766076	245766076	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	1	245766076	245766076	C	T	SNP	KIF26B	NM_018012.3	human	genbank	58_37c	+1	provisional	silent	c.1548	p.D516	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LARP1	23367	genome.wustl.edu	37	5	154181757	154181757	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	5	154181757	154181757	A	T	SNP	LARP1	NM_015315.3	human	genbank	58_37c	+1	validated	missense	c.1676	p.D559V	1.000	NULL	HMMSmart_DM15,HMMPfam_La,HMMSmart_LA,PatternScan_CYTOCHROME_B5_1,superfamily_SSF46785	-	no_errors
LGALS3BP	3959	genome.wustl.edu	37	17	76968195	76968195	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	76968195	76968195	C	T	SNP	LGALS3BP	NM_005567.3	human	genbank	58_37c	-1	reviewed	silent	c.1221	p.R407	0.421	NULL	HMMPfam_SRCR,PatternScan_SRCR_1,HMMPfam_BACK,HMMSmart_SR,superfamily_Srcr_receptor	-	no_errors
LOC146880	146880	genome.wustl.edu	37	17	62758551	62758551	+	RNA	SNP	G	G	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	62758551	62758551	G	C	SNP	LOC146880	NR_026899.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	no_errors
LOC146880	146880	genome.wustl.edu	37	17	62758648	62758648	+	RNA	SNP	C	C	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	62758648	62758648	C	G	SNP	LOC146880	NR_026899.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	no_errors
LRP6	4040	genome.wustl.edu	37	12	12397348	12397348	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	12	12397348	12397348	C	T	SNP	LRP6	NM_002336.2	human	genbank	58_37c	-1	reviewed	silent	c.297	p.G99	0.876	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
MLLT6	4302	genome.wustl.edu	37	17	36865482	36865482	+	Missense_Mutation	SNP	C	C	T	rs151117453	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	36865482	36865482	C	T	SNP	MLLT6	ENST00000358312	human	ensembl	58_37c	+1	known	missense	c.347	p.A116V	1.000	NULL	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
MYO6	4646	genome.wustl.edu	37	6	76554660	76554663	+	Frame_Shift_Del	DEL	ACAA	ACAA	-	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	ACAA	ACAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	6	76554660	76554663	ACAA	-	DEL	MYO6	NM_004999.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.863_866	p.K289fs	1.000:1.000:1.000:1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NEIL1	79661	genome.wustl.edu	37	15	75647144	75647144	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	15	75647144	75647144	C	T	SNP	NEIL1	NM_024608.2	human	genbank	58_37c	+1	validated	nonsense	c.1087	p.R363*	0.000	NULL	superfamily_S13-like H2TH domain,HMMPfam_Fapy_DNA_glyco,superfamily_N-terminal domain of MutM-like DNA repair proteins,HMMPfam_Neil1-DNA_bind,HMMPfam_H2TH,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
NR1H2	7376	genome.wustl.edu	37	19	50881600	50881600	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	19	50881600	50881600	C	T	SNP	NR1H2	NM_007121.4	human	genbank	58_37c	+1	validated	missense	c.376	p.R126W	1.000	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
NTNG2	84628	genome.wustl.edu	37	9	135073814	135073814	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	9	135073814	135073814	C	T	SNP	NTNG2	NM_032536.2	human	genbank	58_37c	+1	validated	silent	c.675	p.P225	0.040	HMMPfam_Laminin_N,HMMSmart_SM00136	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_Laminin_N,HMMSmart_SM00136,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin	-	no_errors
OR6B3	150681	genome.wustl.edu	37	2	240984860	240984860	+	Silent	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	2	240984860	240984860	T	C	SNP	OR6B3	NM_173351.1	human	genbank	58_37c	-1	provisional	silent	c.630	p.P210	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR6C70	390327	genome.wustl.edu	37	12	55863307	55863307	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	12	55863307	55863307	T	C	SNP	OR6C70	NM_001005499.1	human	genbank	58_37c	-1	provisional	missense	c.616	p.I206V	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR8D4	338662	genome.wustl.edu	37	11	123777212	123777212	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	123777212	123777212	T	G	SNP	OR8D4	NM_001005197.1	human	genbank	58_37c	+1	provisional	missense	c.74	p.L25R	0.678	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDH19	57526	genome.wustl.edu	37	X	99663201	99663201	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	X	99663201	99663201	G	T	SNP	PCDH19	NM_001105243.1	human	genbank	58_37c	-1	reviewed	missense	c.395	p.A132E	0.230	superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PELP1	27043	genome.wustl.edu	37	17	4576281	4576281	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	4576281	4576281	C	A	SNP	PELP1	NM_014389.2	human	genbank	58_37c	-1	validated	missense	c.2005	p.G669C	0.374	NULL	HMMPfam_NUC201,HMMPfam_NUC202	-	no_errors
PITPNM2	57605	genome.wustl.edu	37	12	123498580	123498580	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	12	123498580	123498580	G	A	SNP	PITPNM2	NM_020845.2	human	genbank	58_37c	-1	validated	missense	c.88	p.R30C	1.000	HMMPfam_IP_trans,superfamily_Bet v1-like	HMMPfam_IP_trans,HMMPfam_DDHD,HMMPfam_LNS2,HMMSmart_SM00775,superfamily_Bet v1-like,superfamily_HAD-like	-	no_errors
PPAT	5471	genome.wustl.edu	37	4	57272683	57272683	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	4	57272683	57272683	T	C	SNP	PPAT	NM_002703.3	human	genbank	58_37c	-1	reviewed	missense	c.380	p.N127S	1.000	HMMPfam_GATase_2,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	HMMPfam_GATase_2,HMMPfam_Pribosyltran,superfamily_PRTase-like,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	-	no_errors
PPP3R2	5535	genome.wustl.edu	37	9	104356697	104356697	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	9	104356697	104356697	G	A	SNP	PPP3R2	NM_147180.2	human	genbank	58_37c	-1	provisional	silent	c.516	p.I172	0.002	NULL	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
PSTK	118672	genome.wustl.edu	37	10	124742808	124742809	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	10	124742808	124742809	CT	-	DEL	PSTK	NM_153336.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.529_530	p.L179fs	0.993:1.000	HMMPfam_KTI12,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_KTI12,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PTPRB	5787	genome.wustl.edu	37	12	70933795	70933795	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	12	70933795	70933795	G	A	SNP	PTPRB	NM_001109754.1	human	genbank	58_37c	-1	reviewed	nonsense	c.5602	p.R1868*	0.871	NULL	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Ricin_B_lectin,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Ricin B-like lectins,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
PTPRJ	5795	genome.wustl.edu	37	11	48164480	48164480	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	48164480	48164480	C	G	SNP	PTPRJ	NM_002843.3	human	genbank	58_37c	+1	reviewed	missense	c.2453	p.P818R	0.003	HMMSmart_FN3,superfamily_FN_III-like	HMMPfam_Y_phosphatase,HMMSmart_PTPc,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799	-	no_errors
PTPRQ	374462	genome.wustl.edu	37	12	80935456	80935456	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	12	80935456	80935456	C	T	SNP	PTPRQ	ENST00000266688	human	ensembl	58_37c	+1	known	nonsense	c.3277	p.Q1093*	0.994	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
PYHIN1	149628	genome.wustl.edu	37	1	158913619	158913619	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	1	158913619	158913619	G	T	SNP	PYHIN1	NM_152501.3	human	genbank	58_37c	+1	validated	missense	c.1042	p.D348Y	0.018	HMMPfam_HIN	HMMPfam_PAAD_DAPIN,HMMPfam_HIN	-	no_errors
RASA1	5921	genome.wustl.edu	37	5	86670139	86670140	+	Splice_Site	INS	-	-	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	5	86670139	86670140	-	A	INS	RASA1	NM_002890.1	human	genbank	58_37c	+1	reviewed	splice_site_ins	c.1934+2_1934+1	e14+2	1.000:1.000	-	-	-	no_errors
SMURF2	64750	genome.wustl.edu	37	17	62553744	62553745	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	62553744	62553745	AG	-	DEL	SMURF2	NM_022739.3	human	genbank	58_37c	-1	validated	frame_shift_del	c.1413_1412	p.P471fs	0.990:1.000	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-	no_errors
SRPR	6734	genome.wustl.edu	37	11	126134994	126134994	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	126134994	126134994	A	G	SNP	SRPR	NM_003139.3	human	genbank	58_37c	-1	reviewed	missense	c.1385	p.V462A	1.000	HMMPfam_SRP54,HMMSmart_AAA,superfamily_SSF52540	HMMPfam_SRP54,PatternScan_SRP54,HMMSmart_AAA,HMMPfam_SRP-alpha_N,superfamily_SRP54,superfamily_SSF52540	-	no_errors
TAF1L	138474	genome.wustl.edu	37	9	32632815	32632815	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	9	32632815	32632815	G	T	SNP	TAF1L	NM_153809.2	human	genbank	58_37c	-1	provisional	silent	c.2763	p.G921	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
TANC2	26115	genome.wustl.edu	37	17	61428682	61428682	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	61428682	61428682	G	T	SNP	TANC2	NM_025185.3	human	genbank	58_37c	+1	validated	missense	c.1657	p.D553Y	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_TPR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00028,superfamily_TPR-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TMTC4	84899	genome.wustl.edu	37	13	101278370	101278370	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	13	101278370	101278370	T	G	SNP	TMTC4	NM_032813.2	human	genbank	58_37c	-1	validated	missense	c.1541	p.K514T	0.965	HMMPfam_TPR_2,HMMSmart_SM00028,superfamily_TPR-like	HMMPfam_TPR_1,HMMPfam_TPR_2,HMMPfam_DUF1736,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
TMX4	56255	genome.wustl.edu	37	20	8000123	8000123	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	20	8000123	8000123	G	C	SNP	TMX4	NM_021156.2	human	genbank	58_37c	-1	provisional	missense	c.138	p.N46K	1.000	superfamily_Thiordxn-like_fd	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin,PatternScan_THIOREDOXIN_1	-	no_errors
TRIM25	7706	genome.wustl.edu	37	17	54978817	54978817	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	17	54978817	54978817	C	G	SNP	TRIM25	NM_005082.4	human	genbank	58_37c	-1	reviewed	missense	c.1050	p.Q350H	0.000	NULL	HMMSmart_SM00184,HMMPfam_SPRY,HMMSmart_SM00589,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
TRRAP	8295	genome.wustl.edu	37	7	98528431	98528431	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	7	98528431	98528431	T	A	SNP	TRRAP	NM_003496.2	human	genbank	58_37c	+1	validated	missense	c.3569	p.V1190D	1.000	superfamily_ARM repeat	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_COPPER_BLUE,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,superfamily_Protein prenylyltransferase,superfamily_TPR-like	-	no_errors
TTF1	7270	genome.wustl.edu	37	9	135273709	135273709	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	9	135273709	135273709	G	A	SNP	TTF1	NM_007344.2	human	genbank	58_37c	-1	validated	silent	c.1596	p.V532	0.007	NULL	HMMSmart_SANT,HMMPfam_Myb_DNA-binding	-	no_errors
USH1C	10083	genome.wustl.edu	37	11	17531314	17531314	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	11	17531314	17531314	G	A	SNP	USH1C	NM_153676.3	human	genbank	58_37c	-1	reviewed	silent	c.1602	p.G534	0.370	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ	-	no_errors
WBP4	11193	genome.wustl.edu	37	13	41639395	41639395	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	13	41639395	41639395	G	T	SNP	WBP4	NM_007187.3	human	genbank	58_37c	+1	reviewed	missense	c.234	p.E78D	1.000	NULL	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,HMMSmart_ZnF_U1,HMMPfam_zf-U1,superfamily_SSF57667	-	no_errors
ZSCAN5C	649137	genome.wustl.edu	37	19	56720339	56720339	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A12M-01A-11D-A135-09	TCGA-C8-A12M-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a0a7b93-da6e-45b7-9a6f-190d79552b49	5f9aae0c-1d2f-4bb2-b801-32478f7058a2	19	56720339	56720339	T	G	SNP	ZSCAN5C	ENST00000376267	human	ensembl	58_37c	+1	known	missense	c.1261	p.F421V	0.692	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
