Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
FLG	2312	genome.wustl.edu	37	1	152275827	152275827	+	Silent	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_002016.1	-1	reviewed	p.S3845	0.000	280	0%	454	18.1%	1	0%	-	-	-	HMMPfam_Filaggrin
TNN	63923	genome.wustl.edu	37	1	175113661	175113661	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_022093.1	+1	validated	p.R1245T	1.000	101	0%	192	9.9%	0	-	possibly_damaging(0.697)	deleterious(0.01)	deleterious(0.655)	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
DISP1	84976	genome.wustl.edu	37	1	223116667	223116667	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_032890.2	+1	reviewed	p.N168D	0.983	51	0%	80	22.5%	3	33.3%	benign(0.017)	tolerated(0.29)	neutral(0.030)	NULL
ITPKB	3707	genome.wustl.edu	37	1	226923665	226923665	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_002221.3	-1	reviewed	p.V499M	0.004	27	0%	25	56%	12	66.6%	benign(0.091)	tolerated(0.81)	neutral(0.007)	NULL
OBSCN	84033	genome.wustl.edu	37	1	228403424	228403424	+	Silent	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_001098623.1	+1	reviewed	p.R663	0.105	16	0%	28	35.7%	2	0%	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
GPR75	10936	genome.wustl.edu	37	2	54081345	54081345	+	Silent	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_006794.2	-1	validated	p.T183	0.857	144	0%	193	53.4%	3	100%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LCT	3938	genome.wustl.edu	37	2	136552311	136552313	+	In_Frame_Del	DEL	TCC	TCC	-	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_002299.2	-1	reviewed	p.R1670in_frame_del	1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
STK39	27347	genome.wustl.edu	37	2	168931652	168931652	+	Silent	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_013233.2	-1	reviewed	p.S393	0.996	305	0%	264	45.5%	0	-	-	-	-	NULL
CHL1	10752	genome.wustl.edu	37	3	431122	431122	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_006614.2	+1	reviewed	p.D812G	0.945	60	0%	95	52.6%	1	0%	benign(0)	tolerated(0.12)	neutral(0.261)	superfamily_Fibronectin type III
IL5RA	3568	genome.wustl.edu	37	3	3144358	3144358	+	Splice_Site	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_000564.3	-1	reviewed	e2+1	0.968	237	0.8%	189	27.5%	0	-	-	-	-	-
DOCK3	1795	genome.wustl.edu	37	3	51350282	51350282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_004947.3	+1	validated	p.D1068N	1.000	576	0%	882	32.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
VGLL3	389136	genome.wustl.edu	37	3	87017746	87017746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_016206.2	-1	validated	p.D311N	1.000	96	0%	124	43.5%	0	-	possibly_damaging(0.795)	tolerated(0.24)	neutral(0.336)	NULL
DCAF16	54876	genome.wustl.edu	37	4	17805219	17805219	+	Silent	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_017741.3	-1	provisional	p.L182	1.000	344	0%	475	44.6%	8	62.5%	-	-	-	NULL
FBXW7	55294	genome.wustl.edu	37	4	153249456	153249456	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_033632.2	-1	reviewed	p.R441Q	1.000	210	0%	375	43.7%	2	50%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
FBXW7	55294	genome.wustl.edu	37	4	153259012	153259013	+	Frame_Shift_Del	DEL	AT	AT	-	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_033632.2	-1	reviewed	p.M268fs	1.000:1.000	-	-	-	-	-	-	-	-	-	superfamily_WD40 repeat-like
FGA	2243	genome.wustl.edu	37	4	155508049	155508049	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_000508.3	-1	reviewed	p.R178*	1.000	127	0%	188	44.1%	0	-	-	-	-	HMMPfam_Fib_alpha
STOX2	56977	genome.wustl.edu	37	4	184931824	184931824	+	Silent	SNP	C	C	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_020225.1	+1	provisional	p.L611	1.000	36	0%	45	11.1%	2	0%	-	-	-	NULL
MAN1A1	4121	genome.wustl.edu	37	6	119628109	119628109	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_005907.2	-1	reviewed	p.N218H	1.000	403	0%	417	23%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47
LOC100132858	100132858	genome.wustl.edu	37	7	31439	31439	+	Splice_Site	SNP	T	T	A	rs148512677	by1000genomes	TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	XM_001715131.2	-1	model	e4-2	0.007	7	0.000	7	0.857	0	-	-	-	-	-
C9orf93	203238	genome.wustl.edu	37	9	15874644	15874644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_173550.2	+1	predicted	p.E1195K	1.000	99	0%	164	38.4%	2	50%	possibly_damaging(0.806)	deleterious(0)	deleterious(0.748)	NULL
FGFR2	2263	genome.wustl.edu	37	10	123239395	123239399	+	Frame_Shift_Del	DEL	GTGTG	GTGTG	-	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	GTGTG	GTGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_022970.3	-1	reviewed	p.P814fs	0.604:0.964:1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
KRTAP5-10	387273	genome.wustl.edu	37	11	71276787	71276787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_001012710.1	+1	validated	p.V52M	0.993	78	0%	113	63.7%	1	100%	unknown(0)	tolerated(0.28)	-	NULL
EPS8	2059	genome.wustl.edu	37	12	15774273	15774273	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_004447.5	-1	reviewed	p.F816S	1.000	281	0%	337	45.7%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ENDOU	8909	genome.wustl.edu	37	12	48107062	48107062	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_006025.3	-1	reviewed	p.F246L	1.000	235	0%	346	35%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_XendoU
SCYL2	55681	genome.wustl.edu	37	12	100709473	100709473	+	Silent	SNP	T	T	C	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_017988.4	+1	provisional	p.P411	1.000	223	0%	341	44.6%	2	0%	-	-	-	superfamily_ARM repeat
ATP5EP2	432369	genome.wustl.edu	37	13	28519519	28519519	+	Silent	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	ENST00000381026	+1	known	p.N41	0.318	109	0%	74	13.5%	0	-	-	-	-	HMMPfam_ATP-synt_Eps,superfamily_ATP_synth_E
ATP11A	23250	genome.wustl.edu	37	13	113487173	113487173	+	Splice_Site	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_032189.3	+1	reviewed	e14-1	1.000	99	0%	184	35.9%	0	-	-	-	-	-
CEP128	145508	genome.wustl.edu	37	14	80993286	80993286	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_152446.3	-1	validated	p.S1000C	0.416	233	0%	535	14%	2	0%	unknown(0)	deleterious(0.02)	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105413132	105413132	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_138420.2	-1	validated	p.V2886I	0.000	153	0.7%	368	21.2%	0	-	possibly_damaging(0.605)	tolerated(0.24)	neutral(0.247)	NULL
CA12	771	genome.wustl.edu	37	15	63632540	63632540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_001218.3	-1	reviewed	p.P232T	1.000	58	0%	134	49.3%	1	100%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
PLEKHO2	80301	genome.wustl.edu	37	15	65157204	65157204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_025201.4	+1	validated	p.R197Q	0.107	29	0%	54	37%	5	20%	benign(0.027)	tolerated(0.62)	neutral(0.005)	NULL
NOX5	79400	genome.wustl.edu	37	15	69325606	69325606	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_024505.3	+1	validated	p.S264R	1.000	3	0.000	10	0.700	0	-	possibly_damaging(0.923)	deleterious(0.04)	deleterious(0.722)	HMMPfam_Ferric_reduct
ZKSCAN2	342357	genome.wustl.edu	37	16	25258239	25258239	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_001012981.4	-1	validated	p.L426F	0.988	200	0%	266	44.4%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ZFHX3	463	genome.wustl.edu	37	16	72831055	72831079	+	Frame_Shift_Del	DEL	TGGGACCTGAACCTGAGCCTTCAGA	TGGGACCTGAACCTGAGCCTTCAGA	-	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	TGGGACCTGAACCTGAGCCTTCAGA	TGGGACCTGAACCTGAGCCTTCAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_006885.3	-1	reviewed	p.L1835fs	0.505:0.997:1.000:1.000:1.000:0.960:1.000:1.000:1.000:0.880:0.996:1.000:1.000:1.000:1.000:0.951:1.000:1.000:1.000:1.000:1.000:0.998:1.000:0.985:0.726	-	-	-	-	-	-	-	-	-	NULL
ZNF594	84622	genome.wustl.edu	37	17	5085167	5085167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	ENST00000381752	-1	known	p.G7E	1.000	284	0%	260	84.6%	0	-	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	NULL
TP53	7157	genome.wustl.edu	37	17	7574034	7574034	+	Splice_Site	SNP	C	C	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_000546.4	-1	reviewed	e9-1	1.000	31	0%	67	80.6%	25	100%	-	-	-	-
NLRP8	126205	genome.wustl.edu	37	19	56481932	56481932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_176811.2	+1	provisional	p.P802T	0.005	171	0%	126	10.3%	0	-	probably_damaging(0.997)	tolerated(0.99)	neutral(0.466)	superfamily_RNI-like
ZNF334	55713	genome.wustl.edu	37	20	45130951	45130951	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_018102.3	-1	validated	p.H343N	0.999	267	0%	432	14.6%	1	0%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
CLDN17	26285	genome.wustl.edu	37	21	31538891	31538891	+	Silent	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_012131.2	-1	reviewed	p.F15	0.383	65	1.5%	75	38.7%	0	-	-	-	-	HMMPfam_PMP22_Claudin
TSPEAR	54084	genome.wustl.edu	37	21	45945583	45945583	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_144991.2	-1	provisional	p.F430S	1.000	109	0%	138	45.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EPTP
ENSG00000211459	0	genome.wustl.edu	37	MT	737	737	+	RNA	SNP	C	C	T	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	ENST00000389680	+1	known	NULL	NULL	308	0%	294	17%	3738	9.8%	-	-	-	-
SRPX	8406	genome.wustl.edu	37	X	38016244	38016244	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_006307.4	-1	validated	p.L332V	0.991	56	0%	98	48%	7	71.4%	possibly_damaging(0.608)	deleterious(0.01)	deleterious(0.616)	NULL
ODZ1	10178	genome.wustl.edu	37	X	123518366	123518366	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_014253.3	-1	reviewed	p.R2132C	1.000	333	0%	375	25.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BCORL1	63035	genome.wustl.edu	37	X	129139240	129139240	+	Silent	SNP	G	G	A	novel		TCGA-D1-A16I-01A-11D-A12J-09	TCGA-D1-A16I-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ef5ec03d-0f9f-427f-aee9-f1b70aca300a	13491385-862c-4cf8-a61e-0568e3440d63	NM_021946.3	+1	reviewed	p.V11	1.000	46	0%	65	52.3%	3	100%	-	-	-	NULL
