Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AKAP4	0	genome.wustl.edu	37	X	49958929	49958929	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	X	49958929	49958929	G	A	SNP	AKAP4	NM_003886.2	human	genbank	58_37c	-1	reviewed	silent	c.435	p.G145	0.000	HMMSmart_SM00807	HMMPfam_AKAP_110,HMMPfam_RII_binding_1,HMMSmart_SM00807	-	no_errors
ATF4	0	genome.wustl.edu	37	22	39917837	39917837	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	22	39917837	39917837	T	C	SNP	ATF4	NM_001675.2	human	genbank	58_37c	+1	reviewed	silent	c.286	p.L96	0.995	NULL	HMMSmart_SM00338,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1	-	no_errors
CASP8	0	genome.wustl.edu	37	2	202123066	202123066	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	2	202123066	202123066	G	T	SNP	CASP8	NM_001080125.1	human	genbank	58_37c	+1	reviewed	missense	c.112	p.D38Y	0.008	NULL	HMMPfam_DED,HMMSmart_SM00031,superfamily_DEATH domain,HMMPfam_Peptidase_C14,HMMSmart_SM00115,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS,superfamily_Caspase-like	-	no_errors
CCT6B	0	genome.wustl.edu	37	17	33281599	33281599	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	17	33281599	33281599	A	G	SNP	CCT6B	NM_006584.2	human	genbank	58_37c	-1	reviewed	missense	c.356	p.I119T	1.000	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like	PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like	-	no_errors
CD99	0	genome.wustl.edu	37	X	2641396	2641396	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	X	2641396	2641396	G	A	SNP	CD99	NM_002414.3	human	genbank	58_37c	+1	reviewed	missense	c.352	p.G118R	0.001	NULL	NULL	-	no_errors
CPT2	0	genome.wustl.edu	37	1	53675969	53675969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	1	53675969	53675969	A	G	SNP	CPT2	NM_000098.2	human	genbank	58_37c	+1	reviewed	missense	c.623	p.N208S	1.000	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases	HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2,superfamily_CoA-dependent acyltransferases	-	no_errors
DCAF6	0	genome.wustl.edu	37	1	167935897	167935897	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	1	167935897	167935897	G	A	SNP	DCAF6	NM_018442.2	human	genbank	58_37c	+1	validated	missense	c.190	p.E64K	1.000	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_IQ,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	-	no_errors
DDX12	0	genome.wustl.edu	37	12	9572788	9572789	+	Frame_Shift_Ins	INS	-	-	GCACCTGGAT	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	12	9572788	9572789	-	GCACCTGGAT	INS	DDX12	ENST00000435753	human	ensembl	58_37c	-1	known	frame_shift_ins	c.2266_2265	p.L755fs	0.090:0.122	HMMSmart_SM00491	HMMSmart_SM00488,HMMSmart_SM00491,HMMPfam_DEAD_2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DGKB	0	genome.wustl.edu	37	7	14880851	14880851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	7	14880851	14880851	G	A	SNP	DGKB	NM_004080.2	human	genbank	58_37c	-1	reviewed	missense	c.38	p.S13L	1.000	superfamily_EF-hand	HMMPfam_DAGK_acc,HMMSmart_SM00045,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMSmart_SM00054,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Cysteine-rich domain	-	no_errors
ENSG00000198899	0	genome.wustl.edu	37	MT	8843	8843	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	MT	8843	8843	T	C	SNP	ENSG00000198899	ENST00000361899	human	ensembl	58_37c	+1	known	missense	c.317	p.I106T	NULL	HMMPfam_ATP-synt_A,superfamily_F1F0 ATP synthase subunit A	HMMPfam_ATP-synt_A,PatternScan_ATPASE_A,superfamily_F1F0 ATP synthase subunit A	-	mismatch_between_exon_seq_and_reference
ENSG00000249665	0	genome.wustl.edu	37	8	86786617	86786617	+	RNA	SNP	T	T	C	rs148157466	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	8	86786617	86786617	T	C	SNP	ENSG00000249665	ENST00000503540	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.021	-	-	-	no_errors
FAM157C	0	genome.wustl.edu	37	16	90168695	90168700	+	In_Frame_Del	DEL	GCAGCA	GCAGCA	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	GCAGCA	GCAGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	16	90168695	90168700	GCAGCA	-	DEL	FAM157C	XM_001714162.2	human	genbank	58_37c	+1	model	in_frame_del	c.216_221	p.QQ76in_frame_del	0.011:0.016:0.019:0.021:0.022:0.021	NULL	NULL	-	no_errors
GIGYF2	0	genome.wustl.edu	37	2	233712227	233712229	+	In_Frame_Del	DEL	ACA	ACA	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	ACA	ACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	2	233712227	233712229	ACA	-	DEL	GIGYF2	NM_001103147.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3693_3695	p.Q1235in_frame_del	0.057:0.094:0.124	NULL	HMMPfam_GYF,HMMSmart_GYF,superfamily_GYF	-	no_errors
IRGC	0	genome.wustl.edu	37	19	44223848	44223848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	19	44223848	44223848	G	A	SNP	IRGC	NM_019612.3	human	genbank	58_37c	+1	validated	missense	c.1138	p.A380T	0.772	HMMPfam_IIGP	HMMPfam_IIGP,superfamily_SSF52540	-	no_errors
KDM6A	0	genome.wustl.edu	37	X	44922686	44922687	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	X	44922686	44922687	-	A	INS	KDM6A	NM_021140.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1547_1548	p.Q517fs	1.000:1.000	NULL	HMMPfam_TPR_1,HMMSmart_JmjC,HMMPfam_JmjC,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
LOC441666	0	genome.wustl.edu	37	10	42833133	42833135	+	RNA	DEL	ATT	ATT	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	ATT	ATT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	10	42833133	42833135	ATT	-	DEL	LOC441666	NR_024380.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.966:0.250:0.047	-	-	-	pseudogene
LOC729933	0	genome.wustl.edu	37	1	14290198	14290200	+	In_Frame_Del	DEL	AAA	AAA	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	AAA	AAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	1	14290198	14290200	AAA	-	DEL	LOC729933	XM_001721464.1	human	genbank	58_37c	-1	model	in_frame_del	c.326_324	p.F108in_frame_del	0.003:0.003:0.001	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
MAGI1	0	genome.wustl.edu	37	3	65425560	65425561	+	In_Frame_Ins	INS	-	-	CTG	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	3	65425560	65425561	-	CTG	INS	MAGI1	NM_001033057.1	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.1264_1263	p.421in_frame_insQ	0.208:0.001	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MAP3K1	0	genome.wustl.edu	37	5	56184105	56184105	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	5	56184105	56184105	G	C	SNP	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	missense	c.4310	p.C1437S	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MAP3K4	0	genome.wustl.edu	37	6	161519351	161519353	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	6	161519351	161519353	CTG	-	DEL	MAP3K4	NM_005922.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3566_3568	p.A1193in_frame_del	0.857:0.937:0.950	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MED15	0	genome.wustl.edu	37	22	20920814	20920822	+	In_Frame_Del	DEL	CAGCAGCAG	CAGCAGCAG	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	CAGCAGCAG	CAGCAGCAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	22	20920814	20920822	CAGCAGCAG	-	DEL	MED15	NM_001003891.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.751_759	p.QQQ254in_frame_del	0.998:0.999:1.000:1.000:1.000:0.999:0.999:0.997:0.994	NULL	HMMPfam_ARC105_Med_act	-	no_errors
MED23	0	genome.wustl.edu	37	6	131925356	131925356	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	6	131925356	131925356	T	C	SNP	MED23	NM_004830.2	human	genbank	58_37c	-1	reviewed	missense	c.1718	p.Y573C	1.000	NULL	NULL	-	no_errors
NCOA3	0	genome.wustl.edu	37	20	46279837	46279839	+	In_Frame_Del	DEL	CAG	CAG	-	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	CAG	CAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	20	46279837	46279839	CAG	-	DEL	NCOA3	NM_181659.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3763_3765	p.Q1258in_frame_del	0.584:0.607:0.598	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_DUF1518,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G	rs121913279	byCluster	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PRB1	0	genome.wustl.edu	37	12	11506464	11506464	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	12	11506464	11506464	C	T	SNP	PRB1	NM_005039.3	human	genbank	58_37c	-1	reviewed	silent	c.573	p.Q191	0.000	NULL	NULL	-	pseudogene
RASD2	0	genome.wustl.edu	37	22	35943099	35943099	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	22	35943099	35943099	C	T	SNP	RASD2	NM_014310.3	human	genbank	58_37c	+1	reviewed	silent	c.243	p.P81	0.032	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540	-	no_errors
RBM39	0	genome.wustl.edu	37	20	34313042	34313042	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	20	34313042	34313042	T	A	SNP	RBM39	NM_184234.1	human	genbank	58_37c	-1	reviewed	missense	c.452	p.D151V	1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,superfamily_RNA-binding domain RBD	-	no_errors
RBMX	0	genome.wustl.edu	37	X	135960146	135960147	+	Frame_Shift_Ins	INS	-	-	AA	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	X	135960146	135960147	-	AA	INS	RBMX	NM_002139.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.316_315	p.P105fs	1.000:1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RBM1CTR,superfamily_RNA-binding domain RBD	-	no_errors
RTTN	0	genome.wustl.edu	37	18	67684697	67684697	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	18	67684697	67684697	T	A	SNP	RTTN	NM_173630.3	human	genbank	58_37c	-1	validated	missense	c.6367	p.I2123F	0.992	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
SF3B1	0	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	2	198266834	198266834	T	C	SNP	SF3B1	NM_012433.2	human	genbank	58_37c	-1	reviewed	missense	c.2098	p.K700E	1.000	HMMPfam_HEAT,superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_SF3b1,superfamily_ARM repeat	-	no_errors
SLC35A2	0	genome.wustl.edu	37	X	48761977	48761977	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	X	48761977	48761977	C	A	SNP	SLC35A2	NM_001032289.1	human	genbank	58_37c	-1	provisional	missense	c.619	p.G207W	0.733	NULL	HMMPfam_Nuc_sug_transp	-	no_errors
SUPT16H	0	genome.wustl.edu	37	14	21836478	21836478	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	14	21836478	21836478	T	C	SNP	SUPT16H	NM_007192.3	human	genbank	58_37c	-1	reviewed	missense	c.905	p.Y302C	1.000	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core,HMMPfam_Rtt106,HMMPfam_SPT16	-	no_errors
TBC1D3	0	genome.wustl.edu	37	17	36339597	36339597	+	Missense_Mutation	SNP	G	T	T	rs306818	byFrequency	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	17	36339597	36339597	G	T	SNP	TBC1D3	NM_001123391.2	human	genbank	58_37c	-1	validated	missense	c.1060	p.Q354K	0.880	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors
ZNF772	0	genome.wustl.edu	37	19	57988666	57988667	+	In_Frame_Ins	INS	-	-	GCC	novel	unknown	TCGA-D8-A1JH-01A-11D-A188-09	TCGA-D8-A1JH-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9f59481d-be89-4361-8cc3-3f1d46702016	68f2e564-b0dc-4e75-bc4d-9d849d9ac596	19	57988666	57988667	-	GCC	INS	ZNF772	NM_001024596.2	human	genbank	58_37c	-1	validated	in_frame_ins	c.12_11	p.5in_frame_insA	0.000:0.032	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
