Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AARSD1	0	genome.wustl.edu	37	17	41123700	41123700	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	17	41123700	41123700	G	A	SNP	AARSD1	NM_001136042.2	human	genbank	58_37c	-1	validated	missense	c.431	p.S144F	1.000	superfamily_HSP20_chap	superfamily_HSP20_chap,HMMPfam_tRNA_SAD,HMMPfam_CS,superfamily_Thr/Ala-tRNA-synth_IIc_edit	-	no_errors
AKD1	0	genome.wustl.edu	37	6	109850199	109850201	+	In_Frame_Del	DEL	AAC	AAC	-	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	AAC	AAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	6	109850199	109850201	AAC	-	DEL	AKD1	ENST00000355283	human	ensembl	58_37c	-1	known	in_frame_del	c.885_883	p.V295in_frame_del	0.003:0.000:0.000	NULL	HMMPfam_ADK,HMMPfam_YHS,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
AKR1C2	0	genome.wustl.edu	37	10	5042749	5042749	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	10	5042749	5042749	G	A	SNP	AKR1C2	NM_001354.4	human	genbank	58_37c	-1	reviewed	missense	c.362	p.S121F	0.003	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red,PatternScan_ALDOKETO_REDUCTASE_2,PatternScan_ALDOKETO_REDUCTASE_3,PatternScan_ALDOKETO_REDUCTASE_1	-	no_errors
ATF1	0	genome.wustl.edu	37	12	51203349	51203349	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	12	51203349	51203349	A	G	SNP	ATF1	NM_005171.3	human	genbank	58_37c	+1	validated	missense	c.305	p.Y102C	1.000	NULL	HMMPfam_pKID,HMMSmart_BRLZ,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1	-	no_errors
ATF4	0	genome.wustl.edu	37	22	39918079	39918082	+	Frame_Shift_Del	DEL	TTCC	TTCC	-	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	TTCC	TTCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	22	39918079	39918082	TTCC	-	DEL	ATF4	NM_001675.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.528_531	p.S177fs	1.000:1.000:1.000:0.954	NULL	HMMSmart_SM00338,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1	-	no_errors
ATP2A1	0	genome.wustl.edu	37	16	28898983	28898983	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	16	28898983	28898983	C	A	SNP	ATP2A1	NM_173201.2	human	genbank	58_37c	+1	reviewed	missense	c.868	p.R290S	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
BRD1	0	genome.wustl.edu	37	22	50217426	50217426	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	22	50217426	50217426	G	A	SNP	BRD1	NM_014577.1	human	genbank	58_37c	-1	reviewed	silent	c.540	p.A180	0.917	HMMPfam_EPL1	HMMSmart_PWWP,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMSmart_PHD,superfamily_FYVE_PHD_ZnF,PatternScan_BROMODOMAIN_1,HMMPfam_EPL1,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SSF63748	-	no_errors
C10orf53	0	genome.wustl.edu	37	10	50916662	50916662	+	Nonstop_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	10	50916662	50916662	G	T	SNP	C10orf53	NM_182554.2	human	genbank	58_37c	+1	validated	nonstop	c.473	p.*158L	0.001	NULL	NULL	-	no_errors
C2orf90	0	genome.wustl.edu	37	2	905925	905925	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	2	905925	905925	G	A	SNP	C2orf90	ENST00000434864	human	ensembl	58_37c	-1	known	silent	c.21	p.C7	0.092	NULL	NULL	-	no_errors
CENPC1	0	genome.wustl.edu	37	4	68374632	68374632	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	4	68374632	68374632	C	T	SNP	CENPC1	NM_001812.2	human	genbank	58_37c	-1	reviewed	missense	c.1804	p.G602S	0.047	NULL	superfamily_RmlC-like cupins,HMMPfam_Cupin_2	-	no_errors
CRISPLD1	0	genome.wustl.edu	37	8	75932129	75932130	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	8	75932129	75932130	CA	-	DEL	CRISPLD1	NM_031461.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.1152_1153	p.T385fs	1.000:1.000	superfamily_LCCL domain	HMMSmart_SM00198,HMMPfam_LCCL,HMMSmart_SM00603,superfamily_LCCL domain,HMMPfam_SCP,superfamily_PR-1-like,PatternScan_CRISP_2	-	no_errors
CYP2E1	0	genome.wustl.edu	37	10	135340911	135340911	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	10	135340911	135340911	C	T	SNP	CYP2E1	NM_000773.3	human	genbank	58_37c	+1	reviewed	silent	c.12	p.L4	0.007	NULL	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DLGAP2	0	genome.wustl.edu	37	8	1645363	1645363	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	8	1645363	1645363	G	A	SNP	DLGAP2	NM_004745.3	human	genbank	58_37c	+1	reviewed	nonsense	c.2607	p.W869*	1.000	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors
ENSG00000198804	0	genome.wustl.edu	37	MT	7026	7026	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	MT	7026	7026	G	A	SNP	ENSG00000198804	ENST00000361624	human	ensembl	58_37c	+1	known	missense	c.1123	p.A375T	NULL	HMMPfam_COX1,superfamily_Cytochrome c oxidase subunit I-like	HMMPfam_COX1,PatternScan_COX1_CUB,superfamily_Cytochrome c oxidase subunit I-like	-	mismatch_between_exon_seq_and_reference
FNIP1	0	genome.wustl.edu	37	5	131080327	131080343	+	Frame_Shift_Del	DEL	CAGTCTTGATATACAAT	CAGTCTTGATATACAAT	-	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	CAGTCTTGATATACAAT	CAGTCTTGATATACAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	5	131080327	131080343	CAGTCTTGATATACAAT	-	DEL	FNIP1	NM_133372.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.149_133	p.I45fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.477:0.999:1.000:0.996:1.000:1.000	NULL	NULL	-	no_errors
GOLGA8C	0	genome.wustl.edu	37	15	20776621	20776621	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	15	20776621	20776621	A	G	SNP	GOLGA8C	ENST00000428887	human	ensembl	58_37c	+1	known	missense	c.686	p.E229G	0.922	NULL	NULL	-	no_errors
HSPD1	0	genome.wustl.edu	37	2	198363501	198363501	+	Silent	SNP	C	C	T	rs78187001	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	2	198363501	198363501	C	T	SNP	HSPD1	NM_002156.4	human	genbank	58_37c	-1	reviewed	silent	c.72	p.R24	0.995	NULL	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,PatternScan_CHAPERONINS_CPN60,superfamily_SSF52029,superfamily_SSF54849	-	no_errors
IFITM2	0	genome.wustl.edu	37	11	308323	308323	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	11	308323	308323	T	C	SNP	IFITM2	NM_006435.2	human	genbank	58_37c	+1	validated	missense	c.131	p.V44A	1.000	HMMPfam_CD225	HMMPfam_CD225	-	no_errors
IFRD2	0	genome.wustl.edu	37	3	50327172	50327172	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	3	50327172	50327172	C	A	SNP	IFRD2	NM_006764.4	human	genbank	58_37c	-1	validated	missense	c.760	p.G254C	1.000	HMMPfam_IFRD,superfamily_ARM repeat	HMMPfam_IFRD_C,HMMPfam_IFRD,superfamily_ARM repeat	-	no_errors
KIAA2022	0	genome.wustl.edu	37	X	73960664	73960664	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	X	73960664	73960664	C	T	SNP	KIAA2022	NM_001008537.2	human	genbank	58_37c	-1	validated	missense	c.3728	p.R1243H	0.806	NULL	NULL	-	no_errors
LOC642236	0	genome.wustl.edu	37	9	68433564	68433564	+	RNA	SNP	C	C	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	9	68433564	68433564	C	A	SNP	LOC642236	XR_041085.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
MAP3K1	0	genome.wustl.edu	37	5	56183240	56183241	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	5	56183240	56183241	-	T	INS	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	frame_shift_ins	c.4150_4151	p.R1385fs	1.000:1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MAP4K3	0	genome.wustl.edu	37	2	39519955	39519955	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	2	39519955	39519955	T	C	SNP	MAP4K3	ENST00000437545	human	ensembl	58_37c	-1	known	missense	c.1129	p.T377A	1.000	superfamily_Protein kinase-like (PK-like)	HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
OR3A2	0	genome.wustl.edu	37	17	3181841	3181841	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	17	3181841	3181841	T	G	SNP	OR3A2	NM_002551.3	human	genbank	58_37c	-1	validated	missense	c.389	p.D130A	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR51I1	0	genome.wustl.edu	37	11	5462323	5462323	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	11	5462323	5462323	T	C	SNP	OR51I1	NM_001005288.2	human	genbank	58_37c	-1	validated	missense	c.422	p.N141S	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR5D13	0	genome.wustl.edu	37	11	55541596	55541596	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	11	55541596	55541596	T	G	SNP	OR5D13	NM_001001967.1	human	genbank	58_37c	+1	provisional	missense	c.683	p.M228R	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OSTalpha	0	genome.wustl.edu	37	3	195956806	195956806	+	Silent	SNP	T	T	G	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	3	195956806	195956806	T	G	SNP	OSTalpha	NM_152672.5	human	genbank	58_37c	+1	validated	silent	c.654	p.A218	0.986	NULL	NULL	-	no_errors
PRDM10	0	genome.wustl.edu	37	11	129827675	129827675	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	11	129827675	129827675	G	A	SNP	PRDM10	NM_020228.2	human	genbank	58_37c	-1	reviewed	missense	c.200	p.T67M	0.999	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
RPL5	0	genome.wustl.edu	37	1	93299194	93299197	+	Frame_Shift_Del	DEL	ACAA	ACAA	-	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	ACAA	ACAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	1	93299194	93299197	ACAA	-	DEL	RPL5	NM_000969.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.166_169	p.N57fs	1.000:1.000:0.997:1.000	HMMPfam_Ribosomal_L18p,superfamily_Translational machinery components	HMMPfam_Ribosomal_L18p,superfamily_Translational machinery components	-	no_errors
SHROOM2	0	genome.wustl.edu	37	X	9841726	9841726	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	X	9841726	9841726	A	G	SNP	SHROOM2	NM_001649.2	human	genbank	58_37c	+1	reviewed	missense	c.200	p.K67R	0.947	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_ASD2,HMMPfam_ASD1	-	no_errors
TMEM138	0	genome.wustl.edu	37	11	61135442	61135442	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	11	61135442	61135442	T	C	SNP	TMEM138	NM_016464.4	human	genbank	58_37c	+1	validated	silent	c.348	p.L116	0.157	NULL	NULL	-	no_errors
TP53	0	genome.wustl.edu	37	17	7577022	7577022	+	Nonsense_Mutation	SNP	G	A	A	rs121913344	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	17	7577022	7577022	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.916	p.R306*	1.000	NULL	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRRAP	0	genome.wustl.edu	37	7	98581879	98581907	+	Frame_Shift_Del	DEL	TATTCCAACTGTTCCTATCGTGGATTGCT	TATTCCAACTGTTCCTATCGTGGATTGCT	-	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	TATTCCAACTGTTCCTATCGTGGATTGCT	TATTCCAACTGTTCCTATCGTGGATTGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	7	98581879	98581907	TATTCCAACTGTTCCTATCGTGGATTGCT	-	DEL	TRRAP	NM_003496.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.9111_9139	p.I3038fs	0.948:1.000:1.000:1.000:1.000:1.000:0.746:0.995:0.997:0.037:1.000:1.000:0.881:1.000:1.000:0.727:0.999:0.999:0.746:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_FAT,superfamily_ARM repeat,superfamily_Protein prenylyltransferase,superfamily_TPR-like	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_COPPER_BLUE,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,superfamily_Protein prenylyltransferase,superfamily_TPR-like	-	no_errors
TYRO3	0	genome.wustl.edu	37	15	41862801	41862801	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	15	41862801	41862801	G	T	SNP	TYRO3	NM_006293.3	human	genbank	58_37c	+1	reviewed	splice_site	c.1484-1	e12-1	1.000	-	-	-	no_errors
ZFP36L1	0	genome.wustl.edu	37	14	69256738	69256739	+	In_Frame_Ins	INS	-	-	GAT	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	14	69256738	69256739	-	GAT	INS	ZFP36L1	NM_004926.2	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.529_528	p.176in_frame_insI	1.000:1.000	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,superfamily_SSF90229	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMPfam_Tis11B_N,superfamily_SSF90229	-	no_errors
ZNF317	0	genome.wustl.edu	37	19	9272088	9272088	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XA-01A-11D-A14G-09	TCGA-D8-A1XA-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a362780b-8917-4438-9693-ec9fa84c352a	81ee32ae-fc65-4e2c-bbac-2e22214f817b	19	9272088	9272088	C	T	SNP	ZNF317	NM_020933.3	human	genbank	58_37c	+1	provisional	silent	c.1767	p.S589	0.000	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
