Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA7	0	genome.wustl.edu	37	19	1045035	1045035	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	1045035	1045035	C	G	SNP	ABCA7	NM_019112.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1250	p.S417*	0.003	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACOT1	0	genome.wustl.edu	37	14	74004171	74004171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	14	74004171	74004171	G	A	SNP	ACOT1	NM_001037161.1	human	genbank	58_37c	+1	validated	missense	c.46	p.D16N	1.000	HMMPfam_Bile_Hydr_Trans	HMMPfam_Bile_Hydr_Trans,HMMPfam_BAAT_C,superfamily_SSF53474	-	no_errors
ACSF2	0	genome.wustl.edu	37	17	48538641	48538641	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	48538641	48538641	C	T	SNP	ACSF2	NM_025149.4	human	genbank	58_37c	+1	validated	silent	c.363	p.L121	0.135	HMMPfam_AMP-binding,superfamily_SSF56801	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_SSF56801	-	no_errors
ADAMTS20	0	genome.wustl.edu	37	12	43896138	43896138	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	43896138	43896138	C	T	SNP	ADAMTS20	NM_025003.3	human	genbank	58_37c	-1	validated	missense	c.684	p.M228I	0.001	NULL	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_spacer1,HMMPfam_GON,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ADCY2	0	genome.wustl.edu	37	5	7709482	7709482	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	7709482	7709482	C	T	SNP	ADCY2	NM_020546.2	human	genbank	58_37c	+1	reviewed	silent	c.1560	p.N520	0.962	HMMPfam_DUF1053	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_DUF1053,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ADRBK1	0	genome.wustl.edu	37	11	67048617	67048617	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	67048617	67048617	C	T	SNP	ADRBK1	NM_001619.3	human	genbank	58_37c	+1	reviewed	silent	c.609	p.G203	0.488	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMPfam_RGS,HMMSmart_RGS,HMMSmart_S_TK_X,HMMPfam_PH,HMMSmart_PH,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_Regulat_G_prot_signal_superfam,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF50729	-	no_errors
AGXT2L1	0	genome.wustl.edu	37	4	109669230	109669230	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	109669230	109669230	C	G	SNP	AGXT2L1	NM_031279.3	human	genbank	58_37c	-1	validated	missense	c.1013	p.R338T	0.329	HMMPfam_Aminotran_3,superfamily_PLP-dependent transferases	HMMPfam_Aminotran_3,PatternScan_AA_TRANSFER_CLASS_3,superfamily_PLP-dependent transferases	-	no_errors
AKD1	0	genome.wustl.edu	37	6	109814642	109814642	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	6	109814642	109814642	C	G	SNP	AKD1	ENST00000424296	human	ensembl	58_37c	-1	known	missense	c.2903	p.R968T	0.995	NULL	HMMPfam_ADK,HMMPfam_YHS,superfamily_SSF52540	-	no_errors
AMZ2P1	0	genome.wustl.edu	37	17	62969020	62969020	+	RNA	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	62969020	62969020	G	T	SNP	AMZ2P1	NR_026903.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
ANKRD28	0	genome.wustl.edu	37	3	15727589	15727589	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	15727589	15727589	C	T	SNP	ANKRD28	NM_015199.2	human	genbank	58_37c	-1	provisional	missense	c.1999	p.D667N	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
AOAH	0	genome.wustl.edu	37	7	36552787	36552788	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	36552787	36552788	-	G	INS	AOAH	ENST00000431169	human	ensembl	58_37c	-1	known	frame_shift_ins	c.1918_1917	p.Y639fs	0.000:0.000	NULL	HMMPfam_Lipase_GDSL,HMMPfam_SapB_2,HMMSmart_SM00741,superfamily_Saposin,PatternScan_EGF_1	-	no_errors
APBA3	0	genome.wustl.edu	37	19	3759707	3759707	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	3759707	3759707	C	T	SNP	APBA3	NM_004886.3	human	genbank	58_37c	-1	reviewed	missense	c.556	p.E186K	0.059	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729	-	no_errors
APC2	0	genome.wustl.edu	37	19	1465771	1465771	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	1465771	1465771	G	A	SNP	APC2	NM_005883.2	human	genbank	58_37c	+1	validated	missense	c.2471	p.R824Q	0.024	NULL	HMMPfam_Arm,HMMSmart_SM00185,PatternScan_CYSTEINE_SWITCH,HMMPfam_APC_crr,HMMPfam_SAMP,HMMPfam_APC_basic,superfamily_ARM repeat	-	no_errors
APOL6	0	genome.wustl.edu	37	22	36054859	36054859	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	22	36054859	36054859	C	G	SNP	APOL6	NM_030641.3	human	genbank	58_37c	+1	reviewed	missense	c.248	p.S83C	0.365	HMMPfam_ApoL	HMMPfam_ApoL	-	no_errors
ARHGEF15	0	genome.wustl.edu	37	17	8216367	8216367	+	Silent	SNP	G	G	A	rs150417950	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	8216367	8216367	G	A	SNP	ARHGEF15	NM_173728.2	human	genbank	58_37c	+1	reviewed	silent	c.729	p.P243	0.174	NULL	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,PatternScan_DH_1,superfamily_SSF50729	-	no_errors
ATP9A	0	genome.wustl.edu	37	20	50286620	50286620	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	50286620	50286620	G	C	SNP	ATP9A	NM_006045.1	human	genbank	58_37c	-1	validated	missense	c.1209	p.F403L	1.000	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
ATR	0	genome.wustl.edu	37	3	142266743	142266743	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	142266743	142266743	C	T	SNP	ATR	NM_001184.3	human	genbank	58_37c	-1	reviewed	missense	c.3181	p.E1061K	1.000	superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),HMMPfam_UME,HMMSmart_SM00802,superfamily_ARM repeat,PatternScan_PI3_4_KINASE_2,superfamily_TPR-like	-	no_errors
BCAS4	0	genome.wustl.edu	37	20	49493134	49493134	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	49493134	49493134	C	T	SNP	BCAS4	NM_198799.2	human	genbank	58_37c	+1	validated	missense	c.601	p.R201W	0.000	NULL	NULL	-	no_errors
BSDC1	0	genome.wustl.edu	37	1	32843862	32843862	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	32843862	32843862	G	A	SNP	BSDC1	NM_001143888.1	human	genbank	58_37c	-1	validated	missense	c.602	p.S201L	0.988	HMMPfam_BSD,HMMSmart_BSD	HMMPfam_BSD,HMMSmart_BSD	-	no_errors
C10orf18	0	genome.wustl.edu	37	10	5788925	5788925	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	5788925	5788925	C	G	SNP	C10orf18	NM_017782.4	human	genbank	58_37c	+1	validated	missense	c.3541	p.Q1181E	0.258	NULL	NULL	-	no_errors
C16orf5	0	genome.wustl.edu	37	16	4563801	4563801	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	4563801	4563801	G	C	SNP	C16orf5	NM_013399.2	human	genbank	58_37c	-1	validated	missense	c.137	p.P46R	1.000	NULL	HMMSmart_SM00714,HMMPfam_zf-LITAF-like	-	no_errors
C1orf127	0	genome.wustl.edu	37	1	11008331	11008331	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	11008331	11008331	C	G	SNP	C1orf127	ENST00000377008	human	ensembl	58_37c	-1	known	missense	c.1360	p.E454Q	0.002	NULL	NULL	-	no_errors
C1orf127	0	genome.wustl.edu	37	1	11008427	11008427	+	Missense_Mutation	SNP	G	G	T	rs143447356	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	11008427	11008427	G	T	SNP	C1orf127	ENST00000377008	human	ensembl	58_37c	-1	known	missense	c.1264	p.Q422K	0.005	NULL	NULL	-	no_errors
C3orf30	0	genome.wustl.edu	37	3	118865557	118865557	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	118865557	118865557	G	T	SNP	C3orf30	NM_152539.2	human	genbank	58_37c	+1	validated	missense	c.521	p.G174V	0.000	NULL	NULL	-	no_errors
C9orf50	0	genome.wustl.edu	37	9	132382053	132382053	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	132382053	132382053	G	T	SNP	C9orf50	NM_199350.3	human	genbank	58_37c	-1	validated	silent	c.565	p.R189	0.003	NULL	NULL	-	no_errors
C9orf96	0	genome.wustl.edu	37	9	136270506	136270506	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	136270506	136270506	C	A	SNP	C9orf96	NM_153710.3	human	genbank	58_37c	+1	validated	missense	c.2004	p.S668R	0.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,HMMPfam_Pkinase	-	no_errors
CACNA1D	0	genome.wustl.edu	37	3	53531432	53531432	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	53531432	53531432	C	G	SNP	CACNA1D	NM_000720.2	human	genbank	58_37c	+1	validated	missense	c.321	p.F107L	1.000	superfamily_SSF81324	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_SSF81324	-	no_errors
CACNA1H	0	genome.wustl.edu	37	16	1256238	1256238	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	1256238	1256238	A	G	SNP	CACNA1H	NM_021098.2	human	genbank	58_37c	+1	reviewed	missense	c.2738	p.D913G	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CCDC155	0	genome.wustl.edu	37	19	49902741	49902741	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	49902741	49902741	G	C	SNP	CCDC155	NM_144688.4	human	genbank	58_37c	+1	validated	missense	c.775	p.E259Q	0.853	NULL	NULL	-	no_errors
CD58	0	genome.wustl.edu	37	1	117078619	117078619	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	117078619	117078619	G	A	SNP	CD58	NM_001779.2	human	genbank	58_37c	-1	reviewed	missense	c.596	p.S199L	0.001	NULL	superfamily_Immunoglobulin	-	no_errors
CEACAM16	0	genome.wustl.edu	37	19	45209092	45209092	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	45209092	45209092	C	T	SNP	CEACAM16	NM_001039213.2	human	genbank	58_37c	+1	validated	silent	c.1071	p.T357	1.000	HMMSmart_IGc2,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
CELSR2	0	genome.wustl.edu	37	1	109793212	109793212	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	109793212	109793212	C	T	SNP	CELSR2	NM_001408.2	human	genbank	58_37c	+1	reviewed	missense	c.511	p.R171W	0.997	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,HMMSmart_TNFR,HMMSmart_LamG,HMMPfam_HRM,HMMSmart_HormR,HMMSmart_EGF_CA,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_SSF57196	-	no_errors
CGN	0	genome.wustl.edu	37	1	151509297	151509297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	151509297	151509297	G	A	SNP	CGN	NM_020770.2	human	genbank	58_37c	+1	validated	missense	c.3398	p.R1133H	0.999	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_tail_1	-	no_errors
CHD3	0	genome.wustl.edu	37	17	7796626	7796626	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	7796626	7796626	C	G	SNP	CHD3	NM_001005271.2	human	genbank	58_37c	+1	reviewed	missense	c.709	p.P237A	1.000	HMMPfam_CHDNT	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CIRBP	0	genome.wustl.edu	37	19	1272306	1272306	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	1272306	1272306	C	G	SNP	CIRBP	ENST00000413636	human	ensembl	58_37c	+1	known	missense	c.656	p.S219C	0.128	NULL	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
CNTN1	0	genome.wustl.edu	37	12	41419117	41419117	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	41419117	41419117	G	C	SNP	CNTN1	NM_001843.2	human	genbank	58_37c	+1	reviewed	missense	c.2689	p.E897Q	0.957	superfamily_Fibronectin type III	PatternScan_N6_MTASE,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
COL7A1	0	genome.wustl.edu	37	3	48609475	48609475	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	48609475	48609475	C	T	SNP	COL7A1	NM_000094.3	human	genbank	58_37c	-1	reviewed	missense	c.7027	p.E2343K	1.000	HMMPfam_Collagen	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_vWA-like	-	no_errors
COL9A3	0	genome.wustl.edu	37	20	61458148	61458148	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	61458148	61458148	G	A	SNP	COL9A3	NM_001853.3	human	genbank	58_37c	+1	reviewed	silent	c.768	p.G256	0.876	HMMPfam_Collagen	HMMPfam_Collagen	-	no_errors
CRTC3	0	genome.wustl.edu	37	15	91136895	91136895	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	91136895	91136895	C	T	SNP	CRTC3	NM_022769.3	human	genbank	58_37c	+1	validated	missense	c.259	p.R87W	0.765	NULL	NULL	-	no_errors
CSNK1A1	0	genome.wustl.edu	37	5	148885086	148885086	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	148885086	148885086	G	C	SNP	CSNK1A1	ENST00000503350	human	ensembl	58_37c	-1	known	missense	c.422	p.P141R	1.000	NULL	superfamily_Protein kinase-like (PK-like)	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
CTNNA3	0	genome.wustl.edu	37	10	67862936	67862936	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	67862936	67862936	C	G	SNP	CTNNA3	NM_001127384.1	human	genbank	58_37c	-1	validated	missense	c.1956	p.Q652H	1.000	HMMPfam_Vinculin	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	-	no_errors
DAP	0	genome.wustl.edu	37	5	10681199	10681199	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	10681199	10681199	C	G	SNP	DAP	NM_004394.2	human	genbank	58_37c	-1	reviewed	missense	c.278	p.R93T	0.001	NULL	NULL	-	no_errors
DCAF12L2	0	genome.wustl.edu	37	X	125298870	125298870	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	125298870	125298870	A	T	SNP	DCAF12L2	NM_001013628.2	human	genbank	58_37c	-1	reviewed	silent	c.1038	p.S346	0.471	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DCST2	0	genome.wustl.edu	37	1	154991075	154991075	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	154991075	154991075	G	C	SNP	DCST2	NM_144622.2	human	genbank	58_37c	-1	validated	nonsense	c.2267	p.S756*	0.767	NULL	HMMPfam_DC_STAMP	-	no_errors
DCUN1D5	0	genome.wustl.edu	37	11	102935019	102935019	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	102935019	102935019	C	T	SNP	DCUN1D5	NM_032299.3	human	genbank	58_37c	-1	validated	missense	c.643	p.D215N	1.000	HMMPfam_DUF298	HMMPfam_DUF298	-	no_errors
DDX31	0	genome.wustl.edu	37	9	135513749	135513749	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	135513749	135513749	C	T	SNP	DDX31	NM_138620.1	human	genbank	58_37c	-1	reviewed	silent	c.1757	p.*586	0.000	NULL	PatternScan_DEAD_ATP_HELICASE,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
DDX59	0	genome.wustl.edu	37	1	200635322	200635322	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	200635322	200635322	C	G	SNP	DDX59	NM_001031725.4	human	genbank	58_37c	-1	validated	missense	c.547	p.E183Q	0.482	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_zf-HIT,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DEGS2	0	genome.wustl.edu	37	14	100625894	100625894	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	14	100625894	100625894	C	G	SNP	DEGS2	NM_206918.2	human	genbank	58_37c	-1	reviewed	missense	c.31	p.E11Q	1.000	HMMPfam_Lipid_DES	HMMPfam_FA_desaturase,HMMPfam_Lipid_DES	-	no_errors
DEPDC5	0	genome.wustl.edu	37	22	32180825	32180825	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	22	32180825	32180825	G	T	SNP	DEPDC5	NM_014662.2	human	genbank	58_37c	+1	validated	silent	c.588	p.V196	1.000	NULL	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
DLG4	0	genome.wustl.edu	37	17	7100285	7100285	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	7100285	7100285	G	A	SNP	DLG4	NM_001365.3	human	genbank	58_37c	-1	reviewed	missense	c.1003	p.R335W	1.000	HMMPfam_PDZ_assoc	HMMSmart_SH3,superfamily_SH3,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_Guanylate_kin,HMMSmart_GuKc,HMMPfam_SH3_2,HMMPfam_L27_1,HMMPfam_PDZ_assoc,HMMPfam_Gua_kin_assoc_C,HMMPfam_MAGUK_N_PEST,PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52540	-	no_errors
DNAH2	0	genome.wustl.edu	37	17	7736442	7736442	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	7736442	7736442	G	C	SNP	DNAH2	NM_020877.2	human	genbank	58_37c	+1	validated	missense	c.13032	p.K4344N	1.000	HMMPfam_Dynein_heavy	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAH5	0	genome.wustl.edu	37	5	13769169	13769169	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	13769169	13769169	G	A	SNP	DNAH5	NM_001369.2	human	genbank	58_37c	-1	reviewed	missense	c.9797	p.A3266V	1.000	NULL	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_Spectrin,superfamily_SSF52540	-	no_errors
DNASE1L3	0	genome.wustl.edu	37	3	58190568	58190568	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	58190568	58190568	C	G	SNP	DNASE1L3	NM_004944.2	human	genbank	58_37c	-1	reviewed	missense	c.361	p.D121H	0.983	HMMPfam_Exo_endo_phos,superfamily_DNase I-like,HMMSmart_SM00476	HMMPfam_Exo_endo_phos,superfamily_DNase I-like,HMMSmart_SM00476,PatternScan_DNASE_I_2,PatternScan_DNASE_I_1	-	no_errors
DTX3	0	genome.wustl.edu	37	12	58002372	58002372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	58002372	58002372	G	A	SNP	DTX3	ENST00000413885	human	ensembl	58_37c	+1	known	missense	c.829	p.E277K	1.000	NULL	HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
DUOX1	0	genome.wustl.edu	37	15	45454016	45454016	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	45454016	45454016	C	G	SNP	DUOX1	NM_017434.3	human	genbank	58_37c	+1	reviewed	missense	c.3937	p.L1313V	1.000	HMMPfam_FAD_binding_8,superfamily_Riboflavin synthase domain-like	HMMPfam_An_peroxidase,HMMSmart_SM00054,superfamily_Heme-dependent peroxidases,HMMPfam_FAD_binding_8,HMMPfam_NAD_binding_6,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain	-	no_errors
ENSG00000104777	0	genome.wustl.edu	37	19	24102957	24102969	+	RNA	DEL	TGATTTGGAAAGC	TGATTTGGAAAGC	-	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	TGATTTGGAAAGC	TGATTTGGAAAGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	24102957	24102969	TGATTTGGAAAGC	-	DEL	ENSG00000104777	ENST00000300996	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.009:0.007:0.003:0.001:0.001:0.000:0.001:0.001:0.000:0.002:0.002:0.002:0.002	-	-	-	no_errors
ENSG00000246604	0	genome.wustl.edu	37	1	154184886	154184886	+	RNA	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	154184886	154184886	C	G	SNP	ENSG00000246604	ENST00000502106	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
ENSG00000247165	0	genome.wustl.edu	37	19	6190810	6190811	+	RNA	DEL	AT	AT	-	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	6190810	6190811	AT	-	DEL	ENSG00000247165	ENST00000502114	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
FAM108B1	0	genome.wustl.edu	37	9	74489592	74489592	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	74489592	74489592	C	A	SNP	FAM108B1	NM_016014.2	human	genbank	58_37c	-1	validated	silent	c.405	p.G135	0.997	HMMPfam_Abhydrolase_1,superfamily_SSF53474	HMMPfam_Abhydrolase_1,superfamily_SSF53474	-	no_errors
FAM114A1	0	genome.wustl.edu	37	4	38907253	38907253	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	38907253	38907253	G	A	SNP	FAM114A1	NM_138389.2	human	genbank	58_37c	+1	validated	missense	c.547	p.E183K	0.000	HMMPfam_DUF719	HMMPfam_DUF719	-	no_errors
FAM124B	0	genome.wustl.edu	37	2	225244906	225244906	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	225244906	225244906	A	C	SNP	FAM124B	NM_001122779.1	human	genbank	58_37c	-1	validated	missense	c.752	p.L251R	0.000	NULL	NULL	-	no_errors
FAM164A	0	genome.wustl.edu	37	8	79629583	79629583	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	79629583	79629583	C	G	SNP	FAM164A	NM_016010.2	human	genbank	58_37c	+1	validated	missense	c.833	p.S278C	0.964	NULL	NULL	-	no_errors
FAM5B	0	genome.wustl.edu	37	1	177250316	177250316	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	177250316	177250316	G	T	SNP	FAM5B	NM_021165.2	human	genbank	58_37c	+1	provisional	missense	c.2004	p.M668I	0.990	NULL	HMMSmart_SM00457	-	no_errors
FAM71E2	0	genome.wustl.edu	37	19	55869880	55869903	+	Splice_Site	DEL	GCTCCTTCATCTCGCCCCATGGCT	GCTCCTTCATCTCGCCCCATGGCT	-	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	GCTCCTTCATCTCGCCCCATGGCT	GCTCCTTCATCTCGCCCCATGGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	55869880	55869903	GCTCCTTCATCTCGCCCCATGGCT	-	DEL	FAM71E2	ENST00000326479	human	ensembl	58_37c	-1	known	splice_site_del	c.1277-9_1277-1	e2-1	0.004:0.007:0.009:0.011:0.013:0.015:0.016:0.017:0.017:0.017:0.003:0.001:0.000:0.000:0.001:0.005:0.005:0.003:0.001:0.000:0.000:0.001:0.000:0.000	-	-	-	no_errors
FASN	0	genome.wustl.edu	37	17	80038680	80038680	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	80038680	80038680	C	G	SNP	FASN	NM_004104.4	human	genbank	58_37c	-1	reviewed	missense	c.6714	p.Q2238H	1.000	superfamily_alpha/beta-Hydrolases	HMMPfam_Thioesterase,HMMPfam_adh_short,PatternScan_PHOSPHOPANTETHEINE,HMMPfam_PP-binding,superfamily_ACP-like,superfamily_GroES-like,HMMPfam_ADH_zinc_N,HMMPfam_Methyltransf_12,HMMPfam_ketoacyl-synt,HMMPfam_Ketoacyl-synt_C,HMMPfam_Acyl_transf_1,superfamily_FabD/lysophospholipase-like,superfamily_Probable ACP-binding domain of malonyl-CoA ACP transacylase,superfamily_Thiolase-like,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_B_KETOACYL_SYNTHASE,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_alpha/beta-Hydrolases	-	no_errors
FAT3	0	genome.wustl.edu	37	11	92568091	92568091	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	92568091	92568091	G	A	SNP	FAT3	NM_001008781.2	human	genbank	58_37c	+1	validated	silent	c.9927	p.L3309	0.996	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FBN1	0	genome.wustl.edu	37	15	48787352	48787352	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	48787352	48787352	G	A	SNP	FBN1	NM_000138.4	human	genbank	58_37c	-1	reviewed	missense	c.2645	p.A882V	1.000	HMMPfam_TB,superfamily_TB module/8-cys domain,superfamily_Concanavalin A-like lectins/glucanases	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FBXL5	0	genome.wustl.edu	37	4	15638232	15638232	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	15638232	15638232	G	A	SNP	FBXL5	ENST00000513163	human	ensembl	58_37c	-1	known	nonsense	c.412	p.Q138*	1.000	HMMPfam_F-box,HMMSmart_SM00256,superfamily_F-box domain	HMMPfam_LRR_1,HMMPfam_F-box,HMMSmart_SM00256,HMMSmart_SM00367,superfamily_RNI-like,superfamily_F-box domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
FCGR3A	0	genome.wustl.edu	37	1	161518251	161518251	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	161518251	161518251	G	C	SNP	FCGR3A	ENST00000426740	human	ensembl	58_37c	-1	known	missense	c.329	p.S110C	0.255	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
FLJ46321	0	genome.wustl.edu	37	9	84605770	84605770	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	84605770	84605770	G	A	SNP	FLJ46321	NM_001001670.2	human	genbank	58_37c	+1	validated	missense	c.385	p.V129I	0.223	NULL	NULL	-	no_errors
FOXP2	0	genome.wustl.edu	37	7	114066652	114066652	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	114066652	114066652	C	A	SNP	FOXP2	NM_148898.2	human	genbank	58_37c	+1	reviewed	missense	c.86	p.A29D	1.000	NULL	HMMPfam_Fork_head,HMMSmart_FH,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,PatternScan_FORK_HEAD_2,superfamily_SSF46785	-	no_errors
GCC2	0	genome.wustl.edu	37	2	109102990	109102990	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	109102990	109102990	A	G	SNP	GCC2	NM_181453.3	human	genbank	58_37c	+1	reviewed	silent	c.3816	p.S1272	0.574	NULL	HMMPfam_GRIP,HMMSmart_Grip	-	no_errors
GNL3L	0	genome.wustl.edu	37	X	54586952	54586952	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	54586952	54586952	G	A	SNP	GNL3L	NM_019067.5	human	genbank	58_37c	+1	reviewed	splice_site	c.1667-1	e15-1	1.000	-	-	-	no_errors
GPR113	0	genome.wustl.edu	37	2	26534505	26534505	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	26534505	26534505	G	A	SNP	GPR113	NM_001145168.1	human	genbank	58_37c	-1	validated	silent	c.2091	p.F697	0.000	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_EGF_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
GPT	0	genome.wustl.edu	37	8	145730656	145730656	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	145730656	145730656	G	A	SNP	GPT	NM_005309.2	human	genbank	58_37c	+1	reviewed	missense	c.523	p.E175K	0.335	HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major	HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major	-	no_errors
HELQ	0	genome.wustl.edu	37	4	84361040	84361040	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	84361040	84361040	T	C	SNP	HELQ	NM_133636.2	human	genbank	58_37c	-1	validated	missense	c.1784	p.E595G	1.000	HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HEMK1	0	genome.wustl.edu	37	3	50608618	50608618	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	50608618	50608618	C	T	SNP	HEMK1	NM_016173.3	human	genbank	58_37c	+1	validated	missense	c.83	p.S28L	0.905	NULL	PatternScan_N6_MTASE,HMMPfam_MTS,superfamily_SSF53335	-	no_errors
HIRIP3	0	genome.wustl.edu	37	16	30004965	30004965	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	30004965	30004965	C	T	SNP	HIRIP3	NM_003609.2	human	genbank	58_37c	-1	reviewed	missense	c.1404	p.M468I	1.000	NULL	HMMPfam_CHZ	-	no_errors
IDH3B	0	genome.wustl.edu	37	20	2640352	2640352	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	2640352	2640352	G	C	SNP	IDH3B	NM_006899.2	human	genbank	58_37c	-1	reviewed	missense	c.1003	p.H335D	0.998	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	HMMPfam_Iso_dh,PatternScan_IDH_IMDH,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	-	no_errors
IFNA17	0	genome.wustl.edu	37	9	21228028	21228028	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	21228028	21228028	G	T	SNP	IFNA17	NM_021268.2	human	genbank	58_37c	-1	validated	missense	c.145	p.P49T	0.000	HMMPfam_Interferon,superfamily_4_helix_cytokine	HMMPfam_Interferon,HMMSmart_IFabd,PatternScan_INTERFERON_A_B_D,superfamily_4_helix_cytokine	-	no_errors
IFNA2	0	genome.wustl.edu	37	9	21384861	21384861	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	21384861	21384861	C	T	SNP	IFNA2	NM_000605.3	human	genbank	58_37c	-1	validated	silent	c.468	p.K156	0.011	HMMPfam_Interferon,HMMSmart_IFabd,PatternScan_INTERFERON_A_B_D,superfamily_4_helix_cytokine	HMMPfam_Interferon,HMMSmart_IFabd,PatternScan_INTERFERON_A_B_D,superfamily_4_helix_cytokine	-	no_errors
ITGAM	0	genome.wustl.edu	37	16	31336602	31336602	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	31336602	31336602	G	T	SNP	ITGAM	NM_000632.3	human	genbank	58_37c	+1	reviewed	silent	c.2382	p.V794	1.000	HMMPfam_Integrin_alpha2,superfamily_SSF69179	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_Int_alpha,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_SSF53300,superfamily_SSF69179,superfamily_SSF69318	-	no_errors
KCMF1	0	genome.wustl.edu	37	2	85280380	85280380	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	85280380	85280380	G	A	SNP	KCMF1	NM_020122.4	human	genbank	58_37c	+1	validated	missense	c.994	p.E332K	1.000	NULL	HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
KIAA1107	0	genome.wustl.edu	37	1	92649701	92649701	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	92649701	92649701	G	C	SNP	KIAA1107	NM_015237.2	human	genbank	58_37c	+1	validated	missense	c.3879	p.Q1293H	1.000	NULL	NULL	-	no_errors
KIAA1530	0	genome.wustl.edu	37	4	1348587	1348587	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	1348587	1348587	C	G	SNP	KIAA1530	NM_020894.2	human	genbank	58_37c	+1	validated	silent	c.999	p.L333	0.998	NULL	HMMPfam_DUF2043	-	no_errors
KRT79	0	genome.wustl.edu	37	12	53225306	53225306	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	53225306	53225306	G	C	SNP	KRT79	NM_175834.2	human	genbank	58_37c	-1	reviewed	silent	c.582	p.L194	1.000	HMMPfam_Filament	superfamily_Prefoldin,HMMPfam_Filament,PatternScan_IF	-	no_errors
KTN1	0	genome.wustl.edu	37	14	56107112	56107112	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	14	56107112	56107112	C	T	SNP	KTN1	NM_001079521.1	human	genbank	58_37c	+1	validated	silent	c.1935	p.F645	0.999	NULL	superfamily_Spectrin repeat	-	no_errors
LAMA3	0	genome.wustl.edu	37	18	21417017	21417017	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	18	21417017	21417017	C	T	SNP	LAMA3	NM_198129.1	human	genbank	58_37c	+1	reviewed	silent	c.3057	p.D1019	0.037	NULL	HMMPfam_Laminin_B,HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Galactose-binding domain-like,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00281,PatternScan_CHAPERONINS_CPN60,superfamily_EGF/Laminin	-	no_errors
LASS3	0	genome.wustl.edu	37	15	100996101	100996101	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	100996101	100996101	C	T	SNP	LASS3	NM_178842.3	human	genbank	58_37c	-1	validated	missense	c.996	p.M332I	0.003	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724,superfamily_Homeodomain-like	-	no_errors
LETM2	0	genome.wustl.edu	37	8	38258464	38258464	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	38258464	38258464	C	T	SNP	LETM2	NM_144652.1	human	genbank	58_37c	+1	provisional	nonsense	c.592	p.Q198*	1.000	HMMPfam_LETM1	HMMPfam_LETM1	-	no_errors
LGI2	0	genome.wustl.edu	37	4	25005818	25005818	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	25005818	25005818	C	G	SNP	LGI2	NM_018176.3	human	genbank	58_37c	-1	validated	missense	c.893	p.G298A	1.000	HMMPfam_EPTP	HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_EPTP,superfamily_L domain-like	-	no_errors
LHX5	0	genome.wustl.edu	37	12	113906151	113906151	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	113906151	113906151	G	T	SNP	LHX5	NM_022363.2	human	genbank	58_37c	-1	reviewed	missense	c.456	p.D152E	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1,superfamily_SSF57716	-	no_errors
LLPH	0	genome.wustl.edu	37	12	66522788	66522788	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	66522788	66522788	G	A	SNP	LLPH	NM_032338.3	human	genbank	58_37c	-1	validated	silent	c.99	p.L33	0.998	HMMPfam_Laps	HMMPfam_Laps	-	no_errors
LOC100132247	0	genome.wustl.edu	37	16	22545293	22545293	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	22545293	22545293	C	G	SNP	LOC100132247	NM_001135865.1	human	genbank	58_37c	+1	validated	missense	c.989	p.P330R	0.983	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
LOC100133317	0	genome.wustl.edu	37	7	32867052	32867052	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	32867052	32867052	G	A	SNP	LOC100133317	XR_039293.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.993	-	-	-	pseudogene
LOC100287847	0	genome.wustl.edu	37	9	66565467	66565467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	66565467	66565467	C	T	SNP	LOC100287847	XM_002342920.1	human	genbank	58_37c	+1	model	missense	c.461	p.A154V	0.010	NULL	NULL	-	no_errors
LOC340268	0	genome.wustl.edu	37	7	9766002	9766002	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	9766002	9766002	G	A	SNP	LOC340268	XR_041608.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
LOC644397	0	genome.wustl.edu	37	17	45096842	45096842	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	45096842	45096842	G	A	SNP	LOC644397	XR_042323.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.001	-	-	-	pseudogene
LOC644578	0	genome.wustl.edu	37	4	64215888	64215888	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	64215888	64215888	C	T	SNP	LOC644578	XM_927694.2	human	genbank	58_37c	+1	model	silent	c.537	p.L179	0.003	NULL	"HMMPfam_La,HMMSmart_SM00715,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
LOC645939	0	genome.wustl.edu	37	1	240933075	240933075	+	RNA	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	240933075	240933075	C	G	SNP	LOC645939	XR_078239.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC653071	0	genome.wustl.edu	37	4	68962	68962	+	RNA	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	68962	68962	G	T	SNP	LOC653071	XR_078735.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.023	-	-	-	no_errors
LRCH3	0	genome.wustl.edu	37	3	197574833	197574833	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	197574833	197574833	G	T	SNP	LRCH3	NM_032773.2	human	genbank	58_37c	+1	provisional	nonsense	c.1471	p.E491*	1.000	NULL	HMMPfam_LRR_1,superfamily_Calponin-homology,superfamily_SSF52058	-	no_errors
LRRC27	0	genome.wustl.edu	37	10	134161507	134161507	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	134161507	134161507	G	C	SNP	LRRC27	NM_001143757.1	human	genbank	58_37c	+1	validated	missense	c.573	p.E191D	0.001	NULL	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
LY6K	0	genome.wustl.edu	37	8	143784680	143784680	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	143784680	143784680	C	T	SNP	LY6K	NM_017527.3	human	genbank	58_37c	+1	validated	missense	c.563	p.S188L	0.000	NULL	superfamily_Snake toxin-like	-	no_errors
MAPT	0	genome.wustl.edu	37	17	44067416	44067416	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	44067416	44067416	C	G	SNP	MAPT	NM_001123066.3	human	genbank	58_37c	+1	validated	missense	c.1355	p.S452C	1.000	NULL	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
MKL2	0	genome.wustl.edu	37	16	14339391	14339391	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	14339391	14339391	C	T	SNP	MKL2	NM_014048.3	human	genbank	58_37c	+1	validated	silent	c.1086	p.L362	0.862	NULL	HMMPfam_SAP,HMMSmart_SAP,HMMSmart_RPEL,superfamily_SSF68906	-	no_errors
MOSPD2	0	genome.wustl.edu	37	X	14915213	14915213	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	14915213	14915213	C	G	SNP	MOSPD2	NM_152581.3	human	genbank	58_37c	+1	validated	missense	c.330	p.I110M	1.000	HMMSmart_SM00516,superfamily_CRAL/TRIO domain	HMMPfam_Motile_Sperm,HMMPfam_CRAL_TRIO,HMMSmart_SM00516,superfamily_CRAL/TRIO domain,superfamily_PapD-like,superfamily_CRAL/TRIO N-terminal domain	-	no_errors
MPO	0	genome.wustl.edu	37	17	56356465	56356465	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	56356465	56356465	G	C	SNP	MPO	NM_000250.1	human	genbank	58_37c	-1	reviewed	silent	c.789	p.L263	0.222	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases,PatternScan_PEROXIDASE_1	-	no_errors
MSH5	0	genome.wustl.edu	37	6	31730243	31730243	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	6	31730243	31730243	C	T	SNP	MSH5	NM_025259.5	human	genbank	58_37c	+1	reviewed	missense	c.2491	p.P831S	0.997	NULL	HMMPfam_MutS_V,HMMSmart_MUTSac,PatternScan_DNA_MISMATCH_REPAIR_2,HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII,HMMPfam_MutS_IV,superfamily_SSF52540	-	no_errors
MTOR	0	genome.wustl.edu	37	1	11270881	11270881	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	11270881	11270881	C	G	SNP	MTOR	NM_004958.3	human	genbank	58_37c	-1	reviewed	missense	c.3644	p.R1215T	1.000	superfamily_ARM-type_fold	HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_FAT,HMMPfam_FATC,HMMPfam_Rapamycin_bind,superfamily_FRAP_FKBP12_bind,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF48452	-	no_errors
MYH13	0	genome.wustl.edu	37	17	10206539	10206539	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	10206539	10206539	A	T	SNP	MYH13	NM_003802.2	human	genbank	58_37c	-1	validated	missense	c.5641	p.S1881T	0.994	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYH2	0	genome.wustl.edu	37	17	10447097	10447097	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	10447097	10447097	G	A	SNP	MYH2	NM_001100112.1	human	genbank	58_37c	-1	reviewed	silent	c.672	p.I224	1.000	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYO9A	0	genome.wustl.edu	37	15	72180453	72180453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	72180453	72180453	G	A	SNP	MYO9A	NM_006901.2	human	genbank	58_37c	-1	validated	missense	c.5147	p.S1716L	0.947	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RA,HMMSmart_SM00314,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_GTPase activation domain GAP,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Cysteine-rich domain	-	no_errors
NEB	0	genome.wustl.edu	37	2	152541307	152541307	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	152541307	152541307	A	G	SNP	NEB	NM_004543.4	human	genbank	58_37c	-1	reviewed	silent	c.2820	p.Y940	0.993	HMMPfam_Nebulin,HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NHSL1	0	genome.wustl.edu	37	6	138754770	138754770	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	6	138754770	138754770	G	C	SNP	NHSL1	NM_001144060.1	human	genbank	58_37c	-1	validated	missense	c.712	p.P238A	1.000	NULL	NULL	-	no_errors
NRAS	0	genome.wustl.edu	37	1	115251203	115251203	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	115251203	115251203	C	T	SNP	NRAS	NM_002524.3	human	genbank	58_37c	-1	reviewed	missense	c.523	p.D175N	1.000	NULL	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NUCB1	0	genome.wustl.edu	37	19	49424449	49424449	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	49424449	49424449	G	A	SNP	NUCB1	NM_006184.5	human	genbank	58_37c	+1	reviewed	silent	c.1041	p.L347	0.991	NULL	PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
ODZ1	0	genome.wustl.edu	37	X	123539030	123539030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	123539030	123539030	C	T	SNP	ODZ1	NM_014253.3	human	genbank	58_37c	-1	reviewed	missense	c.5221	p.E1741K	1.000	NULL	HMMPfam_NHL,HMMPfam_EGF,HMMSmart_EGF,HMMPfam_RHS_repeat,HMMPfam_Ten_N,superfamily_N2O_reductase_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_SSF57196	-	no_errors
OR10A6	0	genome.wustl.edu	37	11	7949551	7949551	+	Missense_Mutation	SNP	C	C	G	rs149192400	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	7949551	7949551	C	G	SNP	OR10A6	NM_001004461.1	human	genbank	58_37c	-1	provisional	missense	c.659	p.R220P	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4N5	0	genome.wustl.edu	37	14	20612635	20612635	+	Missense_Mutation	SNP	A	A	G	rs142814666	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	14	20612635	20612635	A	G	SNP	OR4N5	NM_001004724.1	human	genbank	58_37c	+1	provisional	missense	c.741	p.I247M	0.975	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR9G1	0	genome.wustl.edu	37	11	56468331	56468331	+	Silent	SNP	A	A	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	56468331	56468331	A	C	SNP	OR9G1	NM_001005213.1	human	genbank	58_37c	+1	provisional	silent	c.468	p.S156	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PAGE2B	0	genome.wustl.edu	37	X	55103097	55103097	+	Silent	SNP	A	A	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	55103097	55103097	A	C	SNP	PAGE2B	NM_001015038.1	human	genbank	58_37c	+1	provisional	silent	c.180	p.A60	0.002	HMMPfam_GAGE	HMMPfam_GAGE	-	no_errors
PCDHA3	0	genome.wustl.edu	37	5	140180926	140180926	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	140180926	140180926	C	G	SNP	PCDHA3	NM_018906.2	human	genbank	58_37c	+1	reviewed	missense	c.144	p.I48M	0.993	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCNXL2	0	genome.wustl.edu	37	1	233161098	233161098	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	233161098	233161098	C	A	SNP	PCNXL2	NM_014801.3	human	genbank	58_37c	-1	provisional	nonsense	c.4399	p.E1467*	1.000	NULL	HMMPfam_Pecanex_C,PatternScan_DNAJ_1	-	no_errors
PDE6C	0	genome.wustl.edu	37	10	95415556	95415556	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	95415556	95415556	G	C	SNP	PDE6C	NM_006204.3	human	genbank	58_37c	+1	reviewed	missense	c.1975	p.E659Q	1.000	HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMPfam_GAF,HMMSmart_GAF,HMMSmart_HDc,superfamily_SSF109604,superfamily_SSF55781	-	no_errors
PFKP	0	genome.wustl.edu	37	10	3149487	3149487	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	3149487	3149487	G	A	SNP	PFKP	NM_002627.3	human	genbank	58_37c	+1	validated	missense	c.856	p.E286K	0.995	HMMPfam_PFK,superfamily_Phosphofructokinase	HMMPfam_PFK,superfamily_Phosphofructokinase,PatternScan_PHOSPHOFRUCTOKINASE	-	no_errors
PGLYRP3	0	genome.wustl.edu	37	1	153283097	153283097	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	153283097	153283097	G	C	SNP	PGLYRP3	NM_052891.1	human	genbank	58_37c	-1	provisional	silent	c.45	p.L15	0.000	NULL	HMMPfam_Amidase_2,HMMSmart_Ami_2,superfamily_Amidase_2,HMMSmart_PGRP	-	no_errors
PGM5	0	genome.wustl.edu	37	9	71002421	71002421	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	71002421	71002421	G	A	SNP	PGM5	NM_021965.3	human	genbank	58_37c	+1	validated	missense	c.614	p.R205Q	0.995	HMMPfam_PGM_PMM_II,superfamily_Phosphoglucomutase first 3 domains	HMMPfam_PGM_PMM_IV,HMMPfam_PGM_PMM_I,HMMPfam_PGM_PMM_II,HMMPfam_PGM_PMM_III,superfamily_Phosphoglucomutase first 3 domains,PatternScan_PGM_PMM,PatternScan_TRYPSIN_HIS,superfamily_Phosphoglucomutase C-terminal domain	-	no_errors
PHF6	0	genome.wustl.edu	37	X	133547523	133547523	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	133547523	133547523	G	A	SNP	PHF6	NM_001015877.1	human	genbank	58_37c	+1	reviewed	missense	c.421	p.D141N	1.000	NULL	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger	-	no_errors
PIGR	0	genome.wustl.edu	37	1	207106470	207106470	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	207106470	207106470	C	G	SNP	PIGR	NM_002644.3	human	genbank	58_37c	-1	reviewed	missense	c.1747	p.D583H	0.000	NULL	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A	rs121913273	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	178936082	178936082	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1624	p.E542K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178947827	178947827	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	178947827	178947827	G	T	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.2702	p.C901F	1.000	HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like,PatternScan_PI3_4_KINASE_2	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CG	0	genome.wustl.edu	37	7	106509345	106509345	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	106509345	106509345	G	A	SNP	PIK3CG	NM_002649.2	human	genbank	58_37c	+1	reviewed	missense	c.1339	p.A447T	0.027	HMMPfam_PI3K_C2,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_PI3Ka,HMMSmart_SM00145,HMMPfam_PI3K_C2,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_Ubiquitin-like	-	no_errors
PKDREJ	0	genome.wustl.edu	37	22	46656331	46656331	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	22	46656331	46656331	A	T	SNP	PKDREJ	NM_006071.1	human	genbank	58_37c	-1	reviewed	silent	c.2889	p.A963	0.001	NULL	HMMSmart_SM00303,HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_REJ,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PKD_channel	-	no_errors
PLEKHF2	0	genome.wustl.edu	37	8	96166542	96166542	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	96166542	96166542	C	G	SNP	PLEKHF2	NM_024613.3	human	genbank	58_37c	+1	validated	missense	c.270	p.I90M	1.000	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	HMMPfam_FYVE,HMMSmart_FYVE,HMMPfam_PH,HMMSmart_PH,superfamily_FYVE_PHD_ZnF,superfamily_SSF50729	-	no_errors
PLXNA4	0	genome.wustl.edu	37	7	132192988	132192988	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	132192988	132192988	C	G	SNP	PLXNA4	NM_020911.1	human	genbank	58_37c	-1	validated	missense	c.465	p.K155N	1.000	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_SM00429,HMMSmart_SM00423,superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl,superfamily_E set domains,superfamily_Plexin repeat	-	no_errors
POLN	0	genome.wustl.edu	37	4	2210055	2210055	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	2210055	2210055	C	G	SNP	POLN	NM_181808.2	human	genbank	58_37c	-1	validated	missense	c.373	p.E125Q	0.139	NULL	HMMPfam_DNA_pol_A,HMMSmart_SM00482,superfamily_Ribonuclease H-like,superfamily_DNA/RNA polymerases	-	no_errors
POLR2A	0	genome.wustl.edu	37	17	7404270	7404270	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	7404270	7404270	G	A	SNP	POLR2A	NM_000937.3	human	genbank	58_37c	+1	validated	silent	c.1893	p.E631	1.000	HMMPfam_RNA_pol_Rpb1_3,superfamily_SSF64484	HMMPfam_RNA_pol_Rpb1_R,PatternScan_RNA_POL_II_REPEAT,HMMPfam_RNA_pol_Rpb1_2,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_7,HMMPfam_RNA_pol_Rpb1_6,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_SSF64484	-	no_errors
POM121C	0	genome.wustl.edu	37	7	75070302	75070302	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	75070302	75070302	C	G	SNP	POM121C	NM_001099415.1	human	genbank	58_37c	-1	validated	missense	c.157	p.E53Q	1.000	NULL	NULL	-	no_errors
PPEF2	0	genome.wustl.edu	37	4	76805791	76805791	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	76805791	76805791	G	T	SNP	PPEF2	NM_006239.2	human	genbank	58_37c	-1	reviewed	missense	c.702	p.F234L	0.999	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases	HMMPfam_IQ,HMMSmart_SM00054,HMMPfam_Metallophos,HMMSmart_SM00156,PatternScan_SER_THR_PHOSPHATASE,HMMPfam_PPP5,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Metallo-dependent phosphatases	-	no_errors
PPFIA2	0	genome.wustl.edu	37	12	82147853	82147853	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	82147853	82147853	G	A	SNP	PPFIA2	NM_003625.2	human	genbank	58_37c	-1	reviewed	missense	c.148	p.R50W	1.000	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2	-	no_errors
PPP2R2A	0	genome.wustl.edu	37	8	26221289	26221289	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	26221289	26221289	C	T	SNP	PPP2R2A	NM_002717.3	human	genbank	58_37c	+1	reviewed	silent	c.855	p.I285	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_PR55_1,PatternScan_PR55_2,HMMPfam_PP2A_B_N,HMMPfam_PP2A_B_subs_rcg	-	no_errors
PPP4R4	0	genome.wustl.edu	37	14	94718190	94718190	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	14	94718190	94718190	C	G	SNP	PPP4R4	NM_058237.1	human	genbank	58_37c	+1	reviewed	missense	c.1822	p.L608V	0.993	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
PRDM11	0	genome.wustl.edu	37	11	45203410	45203410	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	45203410	45203410	C	T	SNP	PRDM11	NM_020229.2	human	genbank	58_37c	+1	validated	silent	c.195	p.L65	0.546	NULL	NULL	-	no_errors
PRICKLE2	0	genome.wustl.edu	37	3	64133158	64133158	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	64133158	64133158	G	A	SNP	PRICKLE2	NM_198859.3	human	genbank	58_37c	-1	validated	silent	c.1008	p.R336	1.000	NULL	HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_PET,superfamily_SSF57716	-	no_errors
PRKG1	0	genome.wustl.edu	37	10	53227489	53227489	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	53227489	53227489	A	T	SNP	PRKG1	NM_006258.2	human	genbank	58_37c	+1	validated	missense	c.485	p.K162M	1.000	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like	HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMSmart_SM00133,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cAMP-binding domain-like	-	no_errors
PSAP	0	genome.wustl.edu	37	10	73579279	73579279	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	73579279	73579279	C	T	SNP	PSAP	NM_001042465.1	human	genbank	58_37c	-1	reviewed	silent	c.1302	p.E434	0.998	HMMPfam_SapB_1,HMMSmart_SapB,superfamily_Saposin_like	HMMPfam_SapA,HMMSmart_SAPA,HMMPfam_SapB_1,HMMPfam_SapB_2,HMMSmart_SapB,superfamily_Saposin_like	-	no_errors
PTCHD1	0	genome.wustl.edu	37	X	23397794	23397794	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	23397794	23397794	G	C	SNP	PTCHD1	NM_173495.2	human	genbank	58_37c	+1	validated	missense	c.438	p.K146N	1.000	HMMPfam_Patched	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
PTGER3	0	genome.wustl.edu	37	1	71512883	71512883	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	71512883	71512883	C	T	SNP	PTGER3	NM_198718.1	human	genbank	58_37c	-1	reviewed	silent	c.378	p.S126	0.933	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,superfamily_SSF81321	-	no_errors
PTPRC	0	genome.wustl.edu	37	1	198691597	198691597	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	198691597	198691597	C	G	SNP	PTPRC	NM_002838.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1706	p.S569*	0.982	superfamily_Fibronectin type III	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RAVER2	0	genome.wustl.edu	37	1	65243506	65243506	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	65243506	65243506	C	T	SNP	RAVER2	NM_018211.3	human	genbank	58_37c	+1	validated	silent	c.517	p.L173	0.984	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
RFXANK	0	genome.wustl.edu	37	19	19312527	19312527	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	19312527	19312527	G	A	SNP	RFXANK	NM_003721.2	human	genbank	58_37c	+1	reviewed	silent	c.782	p.*261	0.998	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
RIOK1	0	genome.wustl.edu	37	6	7405582	7405582	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	6	7405582	7405582	C	G	SNP	RIOK1	NM_031480.2	human	genbank	58_37c	+1	reviewed	silent	c.1197	p.L399	0.389	NULL	HMMSmart_SM00090,superfamily_Protein kinase-like (PK-like),HMMPfam_RIO1,PatternScan_RIO1	-	no_errors
RTEL1	0	genome.wustl.edu	37	20	62293270	62293270	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	62293270	62293270	C	T	SNP	RTEL1	NM_032957.3	human	genbank	58_37c	+1	reviewed	silent	c.369	p.I123	0.053	HMMSmart_DEXDc2,HMMPfam_DEAD_2,superfamily_SSF52540	HMMSmart_DEXDc2,HMMSmart_HELICc2,HMMPfam_ResIII,HMMPfam_DEAD_2,superfamily_SSF52540,superfamily_SSF57850	-	no_errors
RTN4	0	genome.wustl.edu	37	2	55253275	55253275	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	55253275	55253275	C	T	SNP	RTN4	NM_020532.4	human	genbank	58_37c	-1	reviewed	missense	c.1960	p.E654K	1.000	NULL	HMMPfam_Reticulon	-	no_errors
S1PR3	0	genome.wustl.edu	37	9	91616635	91616635	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	91616635	91616635	C	T	SNP	S1PR3	NM_005226.2	human	genbank	58_37c	+1	reviewed	silent	c.520	p.L174	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
SCAF1	0	genome.wustl.edu	37	19	50161137	50161137	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	50161137	50161137	C	T	SNP	SCAF1	NM_021228.2	human	genbank	58_37c	+1	validated	silent	c.3738	p.A1246	0.621	NULL	NULL	-	no_errors
SCN5A	0	genome.wustl.edu	37	3	38645493	38645494	+	Missense_Mutation	DNP	TG	TG	AA	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	TG	TG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	38645493	38645494	TG	AA	DNP	SCN5A	NM_001099404.1	human	genbank	58_37c	-1	reviewed	missense	c.1600_1599	p.R534W	0.341:0.328	NULL	HMMPfam_IQ,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SDK1	0	genome.wustl.edu	37	7	4213862	4213862	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	4213862	4213862	G	A	SNP	SDK1	NM_152744.3	human	genbank	58_37c	+1	validated	silent	c.4809	p.R1603	0.975	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
SEMA5B	0	genome.wustl.edu	37	3	122642520	122642520	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	122642520	122642520	G	A	SNP	SEMA5B	NM_001031702.2	human	genbank	58_37c	-1	validated	nonsense	c.1216	p.Q406*	1.000	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat	-	no_errors
SEMA7A	0	genome.wustl.edu	37	15	74704309	74704309	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	74704309	74704309	G	A	SNP	SEMA7A	NM_003612.3	human	genbank	58_37c	-1	reviewed	missense	c.1339	p.H447Y	0.006	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMSmart_IG,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_SSF48726	-	no_errors
SENP8	0	genome.wustl.edu	37	15	72432133	72432133	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	72432133	72432133	G	A	SNP	SENP8	NM_145204.3	human	genbank	58_37c	+1	reviewed	missense	c.169	p.E57K	1.000	HMMPfam_Peptidase_C48,superfamily_SSF54001	HMMPfam_Peptidase_C48,superfamily_SSF54001	-	no_errors
SERPINC1	0	genome.wustl.edu	37	1	173884020	173884020	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	173884020	173884020	A	G	SNP	SERPINC1	NM_000488.3	human	genbank	58_37c	-1	reviewed	missense	c.79	p.W27R	1.000	NULL	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SGK2	0	genome.wustl.edu	37	20	42204933	42204933	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	42204933	42204933	G	A	SNP	SGK2	NM_016276.3	human	genbank	58_37c	+1	reviewed	missense	c.943	p.G315R	0.933	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
SLC12A5	0	genome.wustl.edu	37	20	44684870	44684870	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	44684870	44684870	G	A	SNP	SLC12A5	NM_001134771.1	human	genbank	58_37c	+1	reviewed	missense	c.2938	p.E980K	1.000	NULL	HMMPfam_AA_permease	-	no_errors
SLC15A5	0	genome.wustl.edu	37	12	16430536	16430536	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	16430536	16430536	A	C	SNP	SLC15A5	ENST00000344941	human	ensembl	58_37c	-1	known	missense	c.84	p.I28M	0.000	NULL	HMMPfam_PTR2	-	no_errors
SLC25A38	0	genome.wustl.edu	37	3	39425264	39425264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	3	39425264	39425264	G	A	SNP	SLC25A38	NM_017875.2	human	genbank	58_37c	+1	reviewed	missense	c.49	p.D17N	0.991	NULL	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC28A3	0	genome.wustl.edu	37	9	86900304	86900304	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	86900304	86900304	C	G	SNP	SLC28A3	NM_022127.1	human	genbank	58_37c	-1	provisional	missense	c.1603	p.E535Q	0.933	HMMPfam_Nucleos_tra2_C	HMMPfam_Nucleos_tra2_N,HMMPfam_Gate,HMMPfam_Nucleos_tra2_C	-	no_errors
SLC37A4	0	genome.wustl.edu	37	11	118895783	118895783	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	118895783	118895783	C	G	SNP	SLC37A4	ENST00000330775	human	ensembl	58_37c	-1	known	missense	c.1190	p.G397A	1.000	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	PatternScan_GLPT,HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SLU7	0	genome.wustl.edu	37	5	159842203	159842203	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	159842203	159842203	C	T	SNP	SLU7	NM_006425.4	human	genbank	58_37c	-1	reviewed	nonsense	c.99	p.W33*	1.000	NULL	NULL	-	no_errors
SP110	0	genome.wustl.edu	37	2	231077589	231077589	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	231077589	231077589	C	T	SNP	SP110	NM_080424.2	human	genbank	58_37c	-1	reviewed	missense	c.470	p.S157N	0.000	NULL	HMMPfam_SAND,HMMSmart_SM00258,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_Sp100,superfamily_SAND domain-like,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
SPAG5	0	genome.wustl.edu	37	17	26912942	26912942	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	26912942	26912942	G	A	SNP	SPAG5	NM_006461.3	human	genbank	58_37c	-1	reviewed	silent	c.1680	p.L560	0.996	NULL	NULL	-	no_errors
SPAG5	0	genome.wustl.edu	37	17	26918847	26918847	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	26918847	26918847	C	G	SNP	SPAG5	NM_006461.3	human	genbank	58_37c	-1	reviewed	missense	c.1306	p.D436H	1.000	NULL	NULL	-	no_errors
SPATA21	0	genome.wustl.edu	37	1	16736350	16736350	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	16736350	16736350	C	G	SNP	SPATA21	NM_198546.1	human	genbank	58_37c	-1	provisional	missense	c.333	p.Q111H	0.075	NULL	PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
SPG7	0	genome.wustl.edu	37	16	89590168	89590169	+	Frame_Shift_Ins	INS	-	-	ATCTC	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	89590168	89590169	-	ATCTC	INS	SPG7	ENST00000312632	human	ensembl	58_37c	+1	known	frame_shift_ins	c.68_67	p.R23fs	0.007:0.005	NULL	NULL	-	no_stop_codon
ST18	0	genome.wustl.edu	37	8	53038649	53038649	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	53038649	53038649	A	T	SNP	ST18	NM_014682.2	human	genbank	58_37c	-1	validated	silent	c.2718	p.S906	0.496	superfamily_SSF103637	HMMPfam_zf-C2HC,HMMPfam_MYT1,superfamily_SSF103637	-	no_errors
STAC3	0	genome.wustl.edu	37	12	57637603	57637603	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	12	57637603	57637603	C	G	SNP	STAC3	NM_145064.1	human	genbank	58_37c	-1	provisional	missense	c.1087	p.E363Q	1.000	HMMSmart_SM00326,HMMPfam_SH3_2	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_SH3_2,superfamily_Cysteine-rich domain	-	no_errors
STK4	0	genome.wustl.edu	37	20	43615911	43615911	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	20	43615911	43615911	G	A	SNP	STK4	NM_006282.2	human	genbank	58_37c	+1	reviewed	missense	c.499	p.D167N	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
SUMO1P3	0	genome.wustl.edu	37	1	160287443	160287443	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	160287443	160287443	G	A	SNP	SUMO1P3	NR_002190.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
SUPT5H	0	genome.wustl.edu	37	19	39955656	39955656	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	39955656	39955656	C	G	SNP	SUPT5H	NM_001111020.2	human	genbank	58_37c	+1	validated	silent	c.843	p.L281	1.000	HMMSmart_SM00739	HMMPfam_Supt5,HMMPfam_KOW,HMMSmart_SM00739,HMMSmart_SM00738,superfamily_Translation proteins SH3-like domain	-	no_errors
SVEP1	0	genome.wustl.edu	37	9	113265399	113265399	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	113265399	113265399	C	T	SNP	SVEP1	NM_153366.3	human	genbank	58_37c	-1	validated	missense	c.1402	p.E468K	1.000	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Pentaxin,HMMSmart_SM00159,HMMSmart_SM00179,HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_HYR,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Growth factor receptor domain,HMMPfam_GCC2_GCC3,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,superfamily_Complement control module/SCR domain,PatternScan_EGF_CA,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
SYNJ1	0	genome.wustl.edu	37	21	34012090	34012090	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	21	34012090	34012090	C	G	SNP	SYNJ1	NM_003895.3	human	genbank	58_37c	-1	validated	splice_site	c.3589-1	e29-1	0.996	-	-	-	no_errors
SYT12	0	genome.wustl.edu	37	11	66807366	66807366	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	66807366	66807366	G	C	SNP	SYT12	NM_177963.3	human	genbank	58_37c	+1	reviewed	missense	c.313	p.E105Q	1.000	NULL	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
TBC1D2B	0	genome.wustl.edu	37	15	78305373	78305373	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	15	78305373	78305373	C	T	SNP	TBC1D2B	NM_144572.1	human	genbank	58_37c	-1	validated	missense	c.2062	p.E688K	0.050	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
TCERG1	0	genome.wustl.edu	37	5	145838635	145838635	+	Silent	SNP	T	T	C	rs146198634	byFrequency	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	145838635	145838635	T	C	SNP	TCERG1	NM_006706.3	human	genbank	58_37c	+1	reviewed	silent	c.627	p.A209	0.794	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_FF,HMMSmart_SM00441,superfamily_FF domain	-	no_errors
TDRD9	0	genome.wustl.edu	37	14	104506621	104506621	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	14	104506621	104506621	G	A	SNP	TDRD9	NM_153046.2	human	genbank	58_37c	+1	validated	missense	c.3805	p.D1269N	0.998	NULL	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00333,HMMPfam_HA2,HMMPfam_TUDOR,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Tudor/PWWP/MBT	-	no_errors
TET1	0	genome.wustl.edu	37	10	70450589	70450589	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	70450589	70450589	C	G	SNP	TET1	NM_030625.2	human	genbank	58_37c	+1	validated	missense	c.5429	p.P1810R	0.984	NULL	HMMPfam_zf-CXXC	-	no_errors
TG	0	genome.wustl.edu	37	8	133913623	133913623	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	133913623	133913623	G	C	SNP	TG	NM_003235.4	human	genbank	58_37c	+1	reviewed	missense	c.3459	p.K1153N	0.020	HMMPfam_Thyroglobulin_1,superfamily_Thyroglobulin type-1 domain	HMMPfam_Thyroglobulin_1,HMMSmart_SM00211,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin type-1 domain,HMMPfam_COesterase,HMMPfam_GCC2_GCC3,PatternScan_CARBOXYLESTERASE_B_2,superfamily_alpha/beta-Hydrolases,superfamily_TNF receptor-like	-	no_errors
TNFRSF11B	0	genome.wustl.edu	37	8	119941001	119941001	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	119941001	119941001	C	T	SNP	TNFRSF11B	NM_002546.3	human	genbank	58_37c	-1	reviewed	missense	c.568	p.E190K	0.844	NULL	HMMPfam_Death,HMMSmart_SM00005,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_DEATH domain,superfamily_TNF receptor-like	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578460	7578460	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	17	7578460	7578460	A	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.470	p.V157G	0.906	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TXNL1	0	genome.wustl.edu	37	18	54305679	54305679	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	18	54305679	54305679	G	A	SNP	TXNL1	NR_024546.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.141	-	-	-	no_errors
UBE2D2	0	genome.wustl.edu	37	5	138980017	138980017	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	5	138980017	138980017	G	A	SNP	UBE2D2	NM_003339.2	human	genbank	58_37c	+1	reviewed	missense	c.85	p.D29N	1.000	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like	HMMPfam_UQ_con,HMMSmart_SM00212,PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBC-like	-	no_errors
UBE2V2	0	genome.wustl.edu	37	8	48962528	48962528	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	48962528	48962528	C	G	SNP	UBE2V2	NM_003350.2	human	genbank	58_37c	+1	reviewed	missense	c.281	p.S94C	1.000	HMMSmart_SM00212,superfamily_UBC-like	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like	-	no_errors
UBE4B	0	genome.wustl.edu	37	1	10166258	10166258	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	1	10166258	10166258	C	G	SNP	UBE4B	NM_001105562.1	human	genbank	58_37c	+1	reviewed	silent	c.813	p.L271	1.000	NULL	HMMPfam_U-box,HMMSmart_SM00504,HMMPfam_Ufd2P_core,superfamily_RING/U-box	-	no_errors
URB1	0	genome.wustl.edu	37	21	33709732	33709732	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	21	33709732	33709732	G	A	SNP	URB1	NM_014825.2	human	genbank	58_37c	-1	validated	silent	c.4602	p.G1534	0.025	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
USP49	0	genome.wustl.edu	37	6	41774547	41774547	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	6	41774547	41774547	C	G	SNP	USP49	NM_018561.3	human	genbank	58_37c	-1	provisional	missense	c.175	p.E59Q	0.996	HMMPfam_zf-UBP,HMMSmart_SM00290	HMMPfam_UCH,HMMPfam_zf-UBP,HMMSmart_SM00290,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
VAV2	0	genome.wustl.edu	37	9	136661557	136661557	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	136661557	136661557	G	C	SNP	VAV2	NM_001134398.1	human	genbank	58_37c	-1	reviewed	silent	c.1026	p.L342	1.000	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_SH2,HMMSmart_SM00252,PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_SH3_2,superfamily_Calponin-homology domain CH-domain,superfamily_PH domain-like,superfamily_SH2 domain,superfamily_Cysteine-rich domain	-	no_errors
VKORC1	0	genome.wustl.edu	37	16	31105925	31105925	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	31105925	31105925	G	C	SNP	VKORC1	NM_024006.4	human	genbank	58_37c	-1	reviewed	silent	c.126	p.L42	1.000	HMMPfam_VKOR,HMMSmart_SM00756	HMMPfam_VKOR,HMMSmart_SM00756	-	no_errors
WASH6P	0	genome.wustl.edu	37	X	155254735	155254735	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	X	155254735	155254735	C	G	SNP	WASH6P	ENST00000359512	human	ensembl	58_37c	+1	known	missense	c.1273	p.L425V	1.000	NULL	NULL	-	no_errors
WDR11	0	genome.wustl.edu	37	10	122622406	122622406	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	10	122622406	122622406	A	G	SNP	WDR11	NM_018117.11	human	genbank	58_37c	+1	reviewed	missense	c.686	p.K229R	1.000	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
WDR35	0	genome.wustl.edu	37	2	20113974	20113974	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	2	20113974	20113974	G	A	SNP	WDR35	NM_001006657.1	human	genbank	58_37c	-1	reviewed	silent	c.3219	p.L1073	0.996	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
ZBTB22	0	genome.wustl.edu	37	6	33283626	33283626	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	6	33283626	33283626	G	A	SNP	ZBTB22	NM_001145338.1	human	genbank	58_37c	-1	validated	silent	c.1068	p.L356	0.972	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZDHHC5	0	genome.wustl.edu	37	11	57457520	57457520	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	11	57457520	57457520	C	T	SNP	ZDHHC5	NM_015457.2	human	genbank	58_37c	+1	validated	silent	c.402	p.C134	1.000	HMMPfam_zf-DHHC	HMMPfam_zf-DHHC	-	no_errors
ZMIZ2	0	genome.wustl.edu	37	7	44802875	44802875	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	7	44802875	44802875	G	T	SNP	ZMIZ2	NM_031449.3	human	genbank	58_37c	+1	validated	missense	c.1723	p.G575C	1.000	NULL	HMMPfam_zf-MIZ,superfamily_RING/U-box	-	no_errors
ZNF169	0	genome.wustl.edu	37	9	97062379	97062379	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	97062379	97062379	G	C	SNP	ZNF169	NM_194320.2	human	genbank	58_37c	+1	validated	missense	c.539	p.R180T	0.000	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF235	0	genome.wustl.edu	37	19	44791480	44791480	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	44791480	44791480	C	G	SNP	ZNF235	NM_004234.4	human	genbank	58_37c	-1	reviewed	missense	c.2108	p.R703T	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF252	0	genome.wustl.edu	37	8	146202132	146202132	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	146202132	146202132	C	G	SNP	ZNF252	ENST00000355436	human	ensembl	58_37c	-1	known	missense	c.1716	p.Q572H	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF396	0	genome.wustl.edu	37	18	32949307	32949307	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	18	32949307	32949307	G	C	SNP	ZNF396	NM_145756.2	human	genbank	58_37c	-1	validated	missense	c.880	p.L294V	0.977	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF432	0	genome.wustl.edu	37	19	52537854	52537854	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	52537854	52537854	C	G	SNP	ZNF432	NM_014650.2	human	genbank	58_37c	-1	provisional	missense	c.1078	p.V360L	0.019	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF462	0	genome.wustl.edu	37	9	109773294	109773294	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	9	109773294	109773294	G	A	SNP	ZNF462	NM_021224.4	human	genbank	58_37c	+1	validated	missense	c.7504	p.E2502K	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
ZNF536	0	genome.wustl.edu	37	19	31039733	31039733	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	31039733	31039733	C	T	SNP	ZNF536	NM_014717.1	human	genbank	58_37c	+1	provisional	silent	c.3207	p.I1069	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF572	0	genome.wustl.edu	37	8	125988660	125988660	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	8	125988660	125988660	A	T	SNP	ZNF572	NM_152412.2	human	genbank	58_37c	+1	validated	missense	c.150	p.K50N	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF574	0	genome.wustl.edu	37	19	42585045	42585045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	19	42585045	42585045	G	A	SNP	ZNF574	NM_022752.5	human	genbank	58_37c	+1	validated	missense	c.2287	p.E763K	1.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF629	0	genome.wustl.edu	37	16	30793337	30793337	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	16	30793337	30793337	G	C	SNP	ZNF629	NM_001080417.1	human	genbank	58_37c	-1	provisional	nonsense	c.2312	p.S771*	0.978	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF876P	0	genome.wustl.edu	37	4	247396	247396	+	RNA	SNP	G	G	C	novel	unknown	TCGA-E2-A1IN-01A-11D-A13L-09	TCGA-E2-A1IN-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9e85559f-098e-4b0f-8034-4798789e710b	8dd6fca4-007f-45de-a569-bfb899254977	4	247396	247396	G	C	SNP	ZNF876P	XR_079519.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.010	-	-	-	pseudogene
