Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ASXL3	0	genome.wustl.edu	37	18	31326555	31326555	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	18	31326555	31326555	G	A	SNP	ASXL3	NM_030632.1	human	genbank	58_37c	+1	provisional	missense	c.6743	p.R2248Q	1.000	NULL	NULL	-	no_errors
C20orf72	0	genome.wustl.edu	37	20	17950658	17950658	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	20	17950658	17950658	C	T	SNP	C20orf72	NM_052865.2	human	genbank	58_37c	+1	predicted	silent	c.156	p.Y52	0.229	NULL	NULL	-	no_errors
C5orf56	0	genome.wustl.edu	37	5	131796262	131796262	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	5	131796262	131796262	C	T	SNP	C5orf56	NM_001013717.1	human	genbank	58_37c	+1	predicted	nonsense	c.97	p.Q33*	0.001	NULL	NULL	-	no_errors
CHD7	0	genome.wustl.edu	37	8	61766023	61766023	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	8	61766023	61766023	G	T	SNP	CHD7	NM_017780.2	human	genbank	58_37c	+1	reviewed	missense	c.6739	p.D2247Y	1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CIRBP	0	genome.wustl.edu	37	19	1272448	1272448	+	RNA	SNP	C	C	G	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	19	1272448	1272448	C	G	SNP	CIRBP	NR_023312.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	1.000	-	-	-	no_errors
DOCK10	0	genome.wustl.edu	37	2	225662592	225662592	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	2	225662592	225662592	G	T	SNP	DOCK10	NM_014689.2	human	genbank	58_37c	-1	validated	missense	c.4601	p.A1534E	1.000	NULL	HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Ded_cyto,superfamily_PH domain-like	-	no_errors
EIF2B1	0	genome.wustl.edu	37	12	124110991	124110991	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	12	124110991	124110991	C	G	SNP	EIF2B1	NM_001414.3	human	genbank	58_37c	-1	reviewed	missense	c.532	p.V178L	1.000	HMMPfam_IF-2B,superfamily_NagB/RpiA/CoA transferase-like	HMMPfam_IF-2B,superfamily_NagB/RpiA/CoA transferase-like	-	no_errors
ENSG00000198938	0	genome.wustl.edu	37	MT	9545	9545	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	MT	9545	9545	A	G	SNP	ENSG00000198938	ENST00000362079	human	ensembl	58_37c	+1	known	silent	c.339	p.G113	NULL	HMMPfam_COX3,superfamily_Cytochrome c oxidase subunit III-like	HMMPfam_COX3,superfamily_Cytochrome c oxidase subunit III-like	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	2098	2098	+	RNA	SNP	G	G	C	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	MT	2098	2098	G	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000231520	0	genome.wustl.edu	37	10	42379894	42379895	+	Frame_Shift_Ins	INS	-	-	ATTCT	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	10	42379894	42379895	-	ATTCT	INS	ENSG00000231520	ENST00000429113	human	ensembl	58_37c	-1	known	frame_shift_ins	c.180_179	p.M60fs	0.000:0.000	NULL	NULL	-	no_stop_codon
EPPK1	0	genome.wustl.edu	37	8	144940666	144940666	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	8	144940666	144940666	G	A	SNP	EPPK1	NM_031308.1	human	genbank	58_37c	-1	validated	silent	c.6756	p.G2252	0.192	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	-	pseudogene
EPPK1	0	genome.wustl.edu	37	8	144945188	144945188	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	8	144945188	144945188	C	G	SNP	EPPK1	NM_031308.1	human	genbank	58_37c	-1	validated	missense	c.2234	p.R745P	0.854	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	-	pseudogene
FAM71B	0	genome.wustl.edu	37	5	156589497	156589497	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	5	156589497	156589497	C	T	SNP	FAM71B	NM_130899.2	human	genbank	58_37c	-1	validated	silent	c.1779	p.E593	0.077	NULL	NULL	-	no_errors
GMDS	0	genome.wustl.edu	37	6	1930370	1930370	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	6	1930370	1930370	T	C	SNP	GMDS	NM_001500.2	human	genbank	58_37c	-1	validated	silent	c.738	p.K246	0.991	HMMPfam_Epimerase,superfamily_NAD(P)-bd	HMMPfam_Epimerase,superfamily_NAD(P)-bd	-	no_errors
HIST1H2AK	0	genome.wustl.edu	37	6	27805735	27805735	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	6	27805735	27805735	T	C	SNP	HIST1H2AK	NM_003510.2	human	genbank	58_37c	-1	reviewed	missense	c.383	p.K128R	1.000	superfamily_Histone-fold	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
LOC100287993	0	genome.wustl.edu	37	20	29612261	29612261	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	20	29612261	29612261	G	A	SNP	LOC100287993	XM_002344214.1	human	genbank	58_37c	-1	model	silent	c.225	p.R75	0.000	NULL	NULL	-	no_errors
LOC100288765	0	genome.wustl.edu	37	9	69830388	69830388	+	Missense_Mutation	SNP	T	T	C	rs35245170	byCluster	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	9	69830388	69830388	T	C	SNP	LOC100288765	XM_002342925.1	human	genbank	58_37c	+1	model	missense	c.14	p.L5S	0.293	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
LOC283685	0	genome.wustl.edu	37	15	23685225	23685226	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	15	23685225	23685226	-	G	INS	LOC283685	XM_002343322.1	human	genbank	58_37c	-1	model	frame_shift_ins	c.1952_1951	p.Q651fs	0.059:0.043	NULL	NULL	-	no_errors
LOC390561	0	genome.wustl.edu	37	15	31108807	31108807	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	15	31108807	31108807	T	G	SNP	LOC390561	XM_001726958.2	human	genbank	58_37c	+1	model	missense	c.2270	p.L757R	1.000	HMMPfam_RCC1,superfamily_RCC1/BLIP-II	HMMPfam_RCC1,superfamily_RCC1/BLIP-II	-	pseudogene
MST1P9	0	genome.wustl.edu	37	1	17087543	17087544	+	Splice_Site	INS	-	-	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	1	17087543	17087544	-	A	INS	MST1P9	ENST00000389184	human	ensembl	58_37c	-1	known	splice_site_ins	c.NULL	NULL	0.992:0.992	-	-	-	no_coding_region:pseudogene
MT-CYB	0	genome.wustl.edu	37	MT	15323	15323	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	MT	15323	15323	G	A	SNP	MT-CYB	ENST00000361789	human	ensembl	58_37c	+1	known	missense	c.577	p.A193T	NULL	HMMPfam_Cytochrom_B_N,superfamily_Transmembr_di-haem_cytochrome	HMMPfam_Cytochrom_B_N,HMMPfam_Cytochrom_B_C,superfamily_Cytochrome_b/b6_C,superfamily_Transmembr_di-haem_cytochrome	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
NAMPTL	0	genome.wustl.edu	37	10	36811974	36811974	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	10	36811974	36811974	C	A	SNP	NAMPTL	ENST00000440465	human	ensembl	58_37c	-1	known	missense	c.1189	p.D397Y	1.000	HMMPfam_NAPRTase	HMMPfam_NAPRTase	-	no_start_codon
OR11H12	0	genome.wustl.edu	37	14	19378395	19378395	+	Missense_Mutation	SNP	A	A	G	rs2259909	byHapMap	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	14	19378395	19378395	A	G	SNP	OR11H12	NM_001013354.1	human	genbank	58_37c	+1	provisional	missense	c.802	p.S268G	0.193	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR8U1	0	genome.wustl.edu	37	11	56143720	56143720	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	11	56143720	56143720	C	T	SNP	OR8U1	NM_001005204.1	human	genbank	58_37c	+1	provisional	silent	c.621	p.F207	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PI4KAP1	0	genome.wustl.edu	37	22	20383855	20383855	+	RNA	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	22	20383855	20383855	C	T	SNP	PI4KAP1	NR_003563.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.000	-	-	-	pseudogene
PIK3C2B	0	genome.wustl.edu	37	1	204425132	204425132	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	1	204425132	204425132	G	T	SNP	PIK3C2B	NM_002646.3	human	genbank	58_37c	-1	reviewed	missense	c.1795	p.L599M	1.000	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_PI3Ka,HMMSmart_SM00145,HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,HMMPfam_PI3K_C2,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_Ubiquitin-like	-	no_errors
PIK3R1	0	genome.wustl.edu	37	5	67591136	67591137	+	In_Frame_Ins	INS	-	-	GAGACC	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	5	67591136	67591137	-	GAGACC	INS	PIK3R1	NM_181523.1	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.1729_1730	p.579in_frame_insRD	0.975:1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,superfamily_GTPase activation domain GAP,superfamily_SH2 domain	-	no_errors
PPBPL1	0	genome.wustl.edu	37	4	74713658	74713658	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	4	74713658	74713658	C	T	SNP	PPBPL1	ENST00000424295	human	ensembl	58_37c	+1	known	silent	c.76	p.L26	0.396	NULL	HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines	-	no_errors
PRKACA	0	genome.wustl.edu	37	19	14208444	14208444	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	19	14208444	14208444	A	T	SNP	PRKACA	NM_002730.3	human	genbank	58_37c	-1	reviewed	missense	c.589	p.W197R	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
PTCHD3	0	genome.wustl.edu	37	10	27687621	27687621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	10	27687621	27687621	C	T	SNP	PTCHD3	NM_001034842.3	human	genbank	58_37c	-1	validated	missense	c.1906	p.D636N	0.082	HMMPfam_Patched	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
REN	0	genome.wustl.edu	37	1	204129737	204129737	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	1	204129737	204129737	C	T	SNP	REN	NM_000537.3	human	genbank	58_37c	-1	reviewed	missense	c.443	p.R148H	0.995	HMMPfam_Asp,superfamily_Acid proteases	HMMPfam_Asp,PatternScan_ASP_PROTEASE,superfamily_Acid proteases,HMMPfam_A1_Propeptide	-	no_errors
SPRED3	0	genome.wustl.edu	37	19	38882864	38882866	+	In_Frame_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	CCT	CCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	19	38882864	38882866	CCT	-	DEL	SPRED3	NM_001042522.1	human	genbank	58_37c	+1	validated	in_frame_del	c.359_361	p.S124in_frame_del	1.000:0.995:0.997	superfamily_SSF50729	HMMPfam_WH1,HMMPfam_Sprouty,superfamily_SSF50729	-	no_errors
TMPRSS2	0	genome.wustl.edu	37	21	42838079	42838079	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	21	42838079	42838079	G	T	SNP	TMPRSS2	NM_005656.3	human	genbank	58_37c	-1	reviewed	missense	c.1469	p.A490E	0.780	superfamily_Trypsin-like serine proteases	HMMPfam_SRCR,HMMPfam_Trypsin,HMMSmart_SM00020,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,superfamily_Trypsin-like serine proteases,HMMSmart_SM00202,superfamily_SRCR-like,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
TSFM	0	genome.wustl.edu	37	12	58177049	58177049	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	12	58177049	58177049	G	A	SNP	TSFM	NM_005726.5	human	genbank	58_37c	+1	reviewed	missense	c.214	p.G72S	1.000	HMMPfam_UBA,superfamily_UBA-like	HMMPfam_UBA,superfamily_UBA-like,HMMPfam_EF_TS,superfamily_Elongation factor Ts (EF-Ts) dimerisation domain,PatternScan_EF_TS_1,PatternScan_EF_TS_2	-	no_errors
TYRP1	0	genome.wustl.edu	37	9	12698600	12698600	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	9	12698600	12698600	G	A	SNP	TYRP1	NM_000550.2	human	genbank	58_37c	+1	reviewed	nonsense	c.858	p.W286*	1.000	HMMPfam_Tyrosinase,superfamily_Di-copper_centre	HMMPfam_Tyrosinase,PatternScan_TYROSINASE_1,PatternScan_TYROSINASE_2,superfamily_Di-copper_centre	-	no_errors
ZBED1	0	genome.wustl.edu	37	X	2407843	2407843	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	X	2407843	2407843	C	T	SNP	ZBED1	NM_004729.3	human	genbank	58_37c	-1	reviewed	silent	c.918	p.P306	0.028	NULL	HMMPfam_zf-BED,HMMSmart_ZnF_BED,HMMPfam_hATC	-	no_errors
ZNF462	0	genome.wustl.edu	37	9	109687060	109687060	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	9	109687060	109687060	G	A	SNP	ZNF462	NM_021224.4	human	genbank	58_37c	+1	validated	silent	c.867	p.P289	0.936	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
ZNF532	0	genome.wustl.edu	37	18	56586060	56586060	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1IU-01A-11D-A14G-09	TCGA-E2-A1IU-11A-61D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7fcd5fda-8155-4b48-afb9-9e7958627113	48e5f4e0-7f51-47f6-a508-347ed3638a6d	18	56586060	56586060	G	C	SNP	ZNF532	NM_018181.4	human	genbank	58_37c	+1	validated	missense	c.541	p.G181R	0.999	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
