Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1CF	29974	broad.mit.edu	37	10	52566492	52566492	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7382881	7382881	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7680787	7680787	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	8982314	8982314	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	8994177	8994177	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2M	2	broad.mit.edu	37	12	9260366	9260366	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL3	126767	broad.mit.edu	37	1	12785391	12785391	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAK1	22848	broad.mit.edu	37	2	69706164	69706164	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAMP	14	broad.mit.edu	37	2	219131295	219131295	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67197468	67197468	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48349530	48349530	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48415951	48415951	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107591340	107591340	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139906938	139906938	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94574175	94574175	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	66980199	66980199	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67016492	67016492	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87215004	87215004	+	Intron	SNP	G	C	C	rs34455904		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20668259	20668259	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20698651	20698651	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20784905	20784906	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB8	11194	broad.mit.edu	37	7	150731543	150731543	+	Intron	SNP	G	T	T	rs149180972	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48210806	48210806	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48130772	48130772	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48138953	48138953	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48162380	48162380	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48162469	48162469	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183639209	183639209	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17428936	17428936	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22004998	22004998	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF1	23	broad.mit.edu	37	6	30545359	30545359	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119027493	119027493	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179078178	179078178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112194110	112194110	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132360962	132360962	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128598521	128598521	+	5'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADM	34	broad.mit.edu	37	1	76205759	76205759	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89382423	89382423	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD5	91452	broad.mit.edu	37	10	27508851	27508851	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31415952	31415952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32365531	32365531	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220399952	220399952	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER2	340485	broad.mit.edu	37	9	19423792	19423792	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61558508	61558508	+	Missense_Mutation	SNP	G	A	A	rs139813210		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61568155	61568155	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61568643	61568643	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACMSD	130013	broad.mit.edu	37	2	135628551	135628551	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT12	134526	broad.mit.edu	37	5	80655832	80655832	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT6	641372	broad.mit.edu	37	14	74086095	74086096	+	Missense_Mutation	DNP	CT	GA	GA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX3	8310	broad.mit.edu	37	4	8418141	8418141	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131296201	131296201	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20681341	20681341	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20471598	20471598	+	Missense_Mutation	SNP	G	T	T	rs147663018		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20498058	20498058	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20559428	20559428	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20563433	20563433	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429668	20429668	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20448431	20448431	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81568762	81568762	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG2	72	broad.mit.edu	37	2	74140716	74140716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL9	284382	broad.mit.edu	37	19	8807930	8807930	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114699825	114699825	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT1	139741	broad.mit.edu	37	X	127185556	127185556	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT2	140625	broad.mit.edu	37	1	2939410	2939410	+	3'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158397546	158397546	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158399173	158399173	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38519453	38519453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42837203	42837203	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM17	6868	broad.mit.edu	37	2	9676905	9676905	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156899204	156899204	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156991421	156991421	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM21P1	145241	broad.mit.edu	37	14	70714430	70714430	+	5'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87746190	87746190	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87755088	87755088	+	Intron	SNP	G	T	T	rs138665210	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207435397	207435397	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39613231	39613231	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39624857	39624857	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3651812	3651812	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106209051	106209051	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106452700	106452700	+	RNA	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106452758	106452758	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106610209	106610209	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106733399	106733399	+	RNA	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106866959	106866959	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062415	107062415	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107078778	107078778	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM8	101	broad.mit.edu	37	10	135080912	135080912	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33576991	33576991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72493775	72493775	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77359870	77359870	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS1	9510	broad.mit.edu	37	21	28210056	28210056	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS1	9510	broad.mit.edu	37	21	28216549	28216549	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43833653	43833653	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43945608	43945608	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178634575	178634575	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73149155	73149155	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161167710	161167710	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28296484	28296484	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64526878	64526878	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64601143	64601143	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18635882	18635882	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18681698	18681698	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154561804	154561804	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAT2	134637	broad.mit.edu	37	6	143759805	143759805	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123021810	123021810	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131826197	131826197	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131949374	131949374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31146224	31146224	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD1	118	broad.mit.edu	37	4	2883688	2883689	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67352472	67352472	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADI1	55256	broad.mit.edu	37	2	3517828	3517828	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26721659	26721659	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2B	151	broad.mit.edu	37	2	96781416	96781416	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2C	152	broad.mit.edu	37	4	3769412	3769412	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44150429	44150429	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148685935	148685935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147967296	147967296	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148044518	148044518	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFMID	125061	broad.mit.edu	37	17	76202119	76202119	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFM	173	broad.mit.edu	37	4	74368757	74368757	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88767359	88767359	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236708169	236708169	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86940755	86940755	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87531247	87531247	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGGF1	55109	broad.mit.edu	37	5	76355663	76355663	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT3	56894	broad.mit.edu	37	21	45402211	45402211	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT6	137964	broad.mit.edu	37	8	41456634	41456634	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178305762	178305762	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109672096	109672096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	35040923	35040923	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247057967	247057967	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129050057	129050057	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHRR	57491	broad.mit.edu	37	5	427840	427840	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHSG	197	broad.mit.edu	37	3	186338719	186338719	+	Nonstop_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK2	204	broad.mit.edu	37	1	33480187	33480187	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP11	11215	broad.mit.edu	37	13	42876961	42876961	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP1	8165	broad.mit.edu	37	17	55187280	55187280	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP1	8165	broad.mit.edu	37	17	55189395	55189395	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP8	10270	broad.mit.edu	37	19	15483986	15483986	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134223072	134223072	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137732499	137732499	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR7A3	22977	broad.mit.edu	37	1	19611484	19611484	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH16A1	126133	broad.mit.edu	37	19	49964950	49964950	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58257929	58257929	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125877313	125877313	+	Silent	SNP	C	A	A	rs113434283		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L2	160428	broad.mit.edu	37	12	105467714	105467714	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH6A1	4329	broad.mit.edu	37	14	74551586	74551586	+	5'Flank	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101980872	101980872	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG3	10195	broad.mit.edu	37	3	183960709	183960709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29416585	29416585	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551362	29551362	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29754890	29754890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73799562	73799562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73800051	73800051	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPI	248	broad.mit.edu	37	2	233322138	233322138	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK1	80216	broad.mit.edu	37	4	113356453	113356453	+	Missense_Mutation	SNP	G	T	T	rs142605222		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85677430	85677430	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMHR2	269	broad.mit.edu	37	12	53818000	53818000	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMMECR1	9949	broad.mit.edu	37	X	109507780	109507780	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38500951	38500951	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38543334	38543335	+	Intron	DNP	TC	CA	CA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMTN	401138	broad.mit.edu	37	4	71384525	71384525	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104115874	104115874	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	865663	865663	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41543692	41543692	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41557133	41557133	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41558046	41558046	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41585608	41585608	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114278434	114278434	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114279550	114279551	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190554279	190554279	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	broad.mit.edu	37	5	139889656	139889656	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91974260	91974260	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241439815	241439815	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY2	57037	broad.mit.edu	37	7	16666731	16666731	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	74007528	74007528	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	74026835	74026835	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95599567	95599567	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95501719	95501719	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27355368	27355368	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD27	84079	broad.mit.edu	37	19	33098606	33098606	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37508094	37508094	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD35	148741	broad.mit.edu	37	1	145563069	145563069	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97881328	97881328	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD55	79722	broad.mit.edu	37	5	55489118	55489118	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD56	345079	broad.mit.edu	37	4	77817798	77817798	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD57	65124	broad.mit.edu	37	2	110373544	110373544	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99548047	99548047	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS6	203286	broad.mit.edu	37	9	101552507	101552507	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5724381	5724381	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26463539	26463539	+	Missense_Mutation	SNP	G	T	T	rs150999282		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26538272	26538272	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26552826	26552826	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26612914	26612914	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26669343	26669343	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101336246	101336246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22296138	22296138	+	Silent	SNP	A	T	T	rs61746201	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45771878	45771878	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45771893	45771893	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118375	165118375	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90347593	90347593	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90349243	90349243	+	Missense_Mutation	SNP	G	A	A	rs148796695		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA3	306	broad.mit.edu	37	4	79522677	79522677	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC2	314	broad.mit.edu	37	17	40997103	40997103	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC2	314	broad.mit.edu	37	17	41001305	41001305	+	Silent	SNP	C	G	G	rs33923044	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M1	8907	broad.mit.edu	37	19	16338502	16338502	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APC	324	broad.mit.edu	37	5	112175975	112175975	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3A	200315	broad.mit.edu	37	22	39355504	39355504	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21231857	21231857	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234088	21234088	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21235298	21235298	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21238276	21238276	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21255456	21255456	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL6	80830	broad.mit.edu	37	22	36052632	36052632	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57271997	57271997	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP12A	375318	broad.mit.edu	37	2	241631300	241631300	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP2	359	broad.mit.edu	37	12	50344476	50344477	+	5'Flank	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115336645	115336645	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP3	64411	broad.mit.edu	37	5	141041471	141041471	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP3	64411	broad.mit.edu	37	5	141059632	141059632	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143959748	143959748	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP19	84986	broad.mit.edu	37	10	99019108	99019108	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24959289	24959289	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69053054	69053054	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP26	23092	broad.mit.edu	37	5	142273824	142273824	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128839671	128839671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130218249	130218249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP8	23779	broad.mit.edu	37	22	45245091	45245091	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56779328	56779328	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56785317	56785317	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27105667	27105667	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46285546	46285546	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46289928	46289928	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID5A	10865	broad.mit.edu	37	2	97218091	97218091	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL2	402	broad.mit.edu	37	11	64789247	64789247	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL9	132946	broad.mit.edu	37	4	57390053	57390053	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC9	80210	broad.mit.edu	37	2	232141333	232141333	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35723372	35723372	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35724522	35724522	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35731613	35731613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART1	417	broad.mit.edu	37	11	3682645	3682645	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP2	8853	broad.mit.edu	37	2	9531374	9531375	+	Intron	DNP	GG	CA	CA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB16	92591	broad.mit.edu	37	17	42249398	42249398	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177142614	177142614	+	Missense_Mutation	SNP	C	A	A	rs140659869		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB6	140459	broad.mit.edu	37	9	132400147	132400147	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101173671	101173671	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCL3	56676	broad.mit.edu	37	11	8959435	8959435	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASL	435	broad.mit.edu	37	7	65552346	65552346	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNS	440	broad.mit.edu	37	7	97488585	97488585	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPG	374569	broad.mit.edu	37	14	104561841	104561841	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197072368	197072368	+	Silent	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197094181	197094181	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASS1	445	broad.mit.edu	37	9	133342122	133342122	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASS1	445	broad.mit.edu	37	9	133365013	133365013	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176992707	176992707	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	177001826	177001826	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119582809	119582810	+	Intron	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL1	171023	broad.mit.edu	37	20	31021302	31021302	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31314266	31314266	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31325263	31325263	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124413899	124413899	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF2	1386	broad.mit.edu	37	2	175986270	175986270	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF7IP2	80063	broad.mit.edu	37	16	10574812	10574812	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG10	83734	broad.mit.edu	37	5	81354221	81354221	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96756722	96756722	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96781496	96781496	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4B	23192	broad.mit.edu	37	2	242598667	242598667	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108153533	108153533	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25940272	25940272	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47570974	47570974	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113470275	113470275	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11B	23200	broad.mit.edu	37	3	182605388	182605388	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25266991	25266991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42474237	42474237	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B3	483	broad.mit.edu	37	3	141626186	141626186	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10391822	10391822	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36050770	36050770	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138429863	138429863	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1B1	525	broad.mit.edu	37	2	71190322	71190322	+	Missense_Mutation	SNP	C	A	A	rs147187470		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C2	245973	broad.mit.edu	37	2	10912016	10912016	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1G3	127124	broad.mit.edu	37	1	198509680	198509680	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42554681	42554681	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42588499	42588499	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26413610	26413610	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50225013	50225013	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	117094016	117094016	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	117221380	117221380	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142204130	142204130	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L2	127002	broad.mit.edu	37	1	110033152	110033152	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L3	56970	broad.mit.edu	37	17	42275573	42275573	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	69900705	69900705	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32756305	32756305	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR1A	552	broad.mit.edu	37	12	63543865	63543865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZGP1	563	broad.mit.edu	37	7	99573496	99573496	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79177294	79177294	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALTL	145173	broad.mit.edu	37	13	31891838	31891838	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALTL	145173	broad.mit.edu	37	13	31903674	31903674	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	376378	376378	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90661411	90661411	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11098884	11098884	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHD1	22893	broad.mit.edu	37	15	40751731	40751731	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134353267	134353267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2	7916	broad.mit.edu	37	6	31599436	31599436	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS10	79738	broad.mit.edu	37	12	76742009	76742009	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156622600	156622600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAP29	55973	broad.mit.edu	37	7	107224400	107224400	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL6B	255877	broad.mit.edu	37	17	6929781	6929781	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112050130	112050130	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129171314	129171314	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23541479	23541479	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHMT	635	broad.mit.edu	37	5	78423815	78423815	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60573624	60573624	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51696465	51696465	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32640813	32640813	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32740258	32740258	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLID	414899	broad.mit.edu	37	11	121986441	121986441	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP4	652	broad.mit.edu	37	14	54418875	54418875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7727594	7727594	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	33945247	33945247	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	34091682	34091682	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	34125411	34125412	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	34182962	34182962	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1B	658	broad.mit.edu	37	4	96051084	96051084	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43288497	43288497	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC1	646	broad.mit.edu	37	15	83931751	83931751	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112989611	112989612	+	Intron	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112989746	112989746	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112991432	112991432	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13603176	13603176	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13603372	13603372	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13606630	13606630	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL1	80341	broad.mit.edu	37	20	31611278	31611278	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36940272	36940272	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65940369	65940369	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140453096	140453096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140501433	140501433	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41246314	41246314	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32913803	32913803	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32960195	32960195	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD1	23774	broad.mit.edu	37	22	50170589	50170589	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD1	23774	broad.mit.edu	37	22	50180893	50180893	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD2	6046	broad.mit.edu	37	6	32942346	32942346	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59820497	59820497	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSND	7809	broad.mit.edu	37	1	55464866	55464866	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BST1	683	broad.mit.edu	37	4	15732624	15732624	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93716298	93716298	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108045420	108045420	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100613310	100613310	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN1A1	696	broad.mit.edu	37	6	26501952	26501952	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN1A1	696	broad.mit.edu	37	6	26507075	26507075	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26388252	26388253	+	Missense_Mutation	DNP	AA	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A3	54718	broad.mit.edu	37	6	26431801	26431802	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180432208	180432208	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf114	399726	broad.mit.edu	37	10	21784772	21784772	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124457441	124457441	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf28	27291	broad.mit.edu	37	10	99968101	99968101	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf57	80195	broad.mit.edu	37	10	81841801	81841801	+	Intron	SNP	G	A	A	rs113339188		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf71	118461	broad.mit.edu	37	10	50532407	50532407	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115526214	115526214	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf17	56672	broad.mit.edu	37	11	8938818	8938818	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf35	256329	broad.mit.edu	37	11	557581	557581	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf75	56935	broad.mit.edu	37	11	93268772	93268772	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf26	84190	broad.mit.edu	37	12	82824651	82824651	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf40	283461	broad.mit.edu	37	12	40110668	40110668	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112600732	112600732	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf59	120939	broad.mit.edu	37	12	10342590	10342590	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf66	144577	broad.mit.edu	37	12	64609540	64609540	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf71	728858	broad.mit.edu	37	12	27234183	27234183	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf39	196541	broad.mit.edu	37	13	103338686	103338686	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf135	64430	broad.mit.edu	37	14	60591258	60591258	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf143	90141	broad.mit.edu	37	14	90263537	90263537	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf177	283598	broad.mit.edu	37	14	99183589	99183589	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf183	196913	broad.mit.edu	37	14	50550444	50550444	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf23	90417	broad.mit.edu	37	15	40678594	40678594	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf24	56851	broad.mit.edu	37	15	34376541	34376541	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36906401	36906401	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36910902	36910902	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf78	123970	broad.mit.edu	37	16	49433192	49433192	+	3'UTR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf80	29105	broad.mit.edu	37	16	58148824	58148824	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf51	339263	broad.mit.edu	37	17	21477603	21477603	+	RNA	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf70	80233	broad.mit.edu	37	17	79514829	79514829	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf81	23587	broad.mit.edu	37	17	7158125	7158125	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf97	400566	broad.mit.edu	37	17	263129	263129	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30926193	30926193	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30928890	30928890	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf75	284369	broad.mit.edu	37	19	51767524	51767524	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF1	114897	broad.mit.edu	37	17	77042887	77042887	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF6	114904	broad.mit.edu	37	22	37578327	37578327	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179338107	179338107	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170955688	170955688	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247719786	247719786	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf174	339448	broad.mit.edu	37	1	3807396	3807396	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf201	90529	broad.mit.edu	37	1	24700270	24700270	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf55	163859	broad.mit.edu	37	1	226187095	226187095	+	5'Flank	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf94	84970	broad.mit.edu	37	1	34667733	34667733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf106	200232	broad.mit.edu	37	20	55100027	55100028	+	Missense_Mutation	DNP	TG	CT	CT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31876462	31876462	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20234372	20234372	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46046972	46046972	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46057233	46057233	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32546305	32546305	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD3	26005	broad.mit.edu	37	11	73814209	73814209	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf18	54978	broad.mit.edu	37	2	27001138	27001138	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf27A	29798	broad.mit.edu	37	2	132509046	132509046	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26644177	26644177	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf3	6936	broad.mit.edu	37	2	75928379	75928379	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf53	339779	broad.mit.edu	37	2	27360383	27360383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf55	343990	broad.mit.edu	37	2	99413910	99413910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf71	388939	broad.mit.edu	37	2	29293581	29293581	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf71	388939	broad.mit.edu	37	2	29296449	29296449	+	Nonsense_Mutation	SNP	C	A	A	rs114057537	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf84	653140	broad.mit.edu	37	2	24406434	24406434	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63401863	63401863	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf21	152002	broad.mit.edu	37	3	194947589	194947589	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118865608	118865608	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf32	51066	broad.mit.edu	37	3	8671512	8671512	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf75	54859	broad.mit.edu	37	3	47543343	47543343	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf17	84103	broad.mit.edu	37	4	100458876	100458876	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71027333	71027333	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf44	345222	broad.mit.edu	37	4	3265616	3265616	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf51	646603	broad.mit.edu	37	4	146617868	146617868	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175716848	175716848	+	Silent	SNP	G	C	C	rs138928707	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36226716	36226716	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf36	285600	broad.mit.edu	37	5	93929839	93929839	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf41	153222	broad.mit.edu	37	5	172512764	172512764	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41181563	41181563	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32334095	32334095	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165711483	165711483	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf165	154313	broad.mit.edu	37	6	88154673	88154673	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf192	116843	broad.mit.edu	37	6	133094199	133094199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf204	387119	broad.mit.edu	37	6	118805095	118805095	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf222	389384	broad.mit.edu	37	6	36294979	36294979	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf58	352999	broad.mit.edu	37	6	127898540	127898540	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40979846	40979846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf25	79020	broad.mit.edu	37	7	42971829	42971829	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2581099	2581099	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf36	57002	broad.mit.edu	37	7	39610208	39610208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf45	136263	broad.mit.edu	37	7	129855823	129855823	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57411562	57411562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57420643	57420643	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf22	492307	broad.mit.edu	37	8	49985312	49985312	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf22	492307	broad.mit.edu	37	8	49986504	49986504	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf76	84933	broad.mit.edu	37	8	124232296	124232296	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf76	84933	broad.mit.edu	37	8	124249311	124249311	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf125	84302	broad.mit.edu	37	9	104238432	104238432	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf139	401563	broad.mit.edu	37	9	139929087	139929087	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf43	257169	broad.mit.edu	37	9	116191477	116191477	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4618941	4618941	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf96	169436	broad.mit.edu	37	9	136260790	136260790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49713160	49713160	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA12	771	broad.mit.edu	37	15	63619260	63619260	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86250404	86250404	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA2	760	broad.mit.edu	37	8	86389284	86389284	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA5A	763	broad.mit.edu	37	16	87921828	87921828	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP4	57010	broad.mit.edu	37	11	67226161	67226161	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP5	56344	broad.mit.edu	37	19	48542528	48542528	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65142538	65142538	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65157120	65157120	+	Missense_Mutation	SNP	C	A	A	rs72673394	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140811693	140811693	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53756216	53756216	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53804326	53804327	+	Intron	INS	-	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53834231	53834231	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181705562	181705562	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181726302	181726302	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40037036	40037036	+	Missense_Mutation	SNP	A	T	T	rs59635914		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81611853	81611853	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81689893	81689893	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1949897	1949897	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1995215	1995215	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18827336	18827336	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24366100	24366100	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24373044	24373044	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86063476	86063476	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62485004	62485004	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62751548	62751548	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27462299	27462299	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7342415	7342415	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7355420	7355420	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91094979	91094979	+	5'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71417234	71417234	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCA	796	broad.mit.edu	37	11	14992806	14992806	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO2	10241	broad.mit.edu	37	17	46939476	46939476	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93067561	93067561	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93116194	93116194	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALHM1	255022	broad.mit.edu	37	10	105217931	105217931	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALN1	83698	broad.mit.edu	37	7	71571324	71571324	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALN1	83698	broad.mit.edu	37	7	71571365	71571365	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7202101	7202101	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7811134	7811134	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND1	55832	broad.mit.edu	37	12	67675866	67675866	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN13	92291	broad.mit.edu	37	2	30975918	30975918	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN1	823	broad.mit.edu	37	11	64977757	64977757	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPZA3	93661	broad.mit.edu	37	12	18891977	18891977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2951726	2951726	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2976598	2976598	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD18	59082	broad.mit.edu	37	11	105010532	105010532	+	5'Flank	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3026715	3026715	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3047864	3047864	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC1	55259	broad.mit.edu	37	12	25347895	25347895	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASD1	64921	broad.mit.edu	37	7	94185070	94185070	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104972166	104972166	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104815446	104815446	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104817989	104817989	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104821732	104821732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP9	842	broad.mit.edu	37	1	15831140	15831140	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	121981263	121981263	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER1	117144	broad.mit.edu	37	11	65793261	65793261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER4	378807	broad.mit.edu	37	1	26526438	26526438	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN2	147381	broad.mit.edu	37	18	70209226	70209226	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBWD2	150472	broad.mit.edu	37	2	114199041	114199042	+	Intron	INS	-	TG	TG			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBE1	147372	broad.mit.edu	37	18	57107102	57107102	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBE1	147372	broad.mit.edu	37	18	57115198	57115198	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219893021	219893021	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219894146	219894146	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC123	84902	broad.mit.edu	37	19	33417013	33417013	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31592660	31592660	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31617853	31617853	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179718048	179718048	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179733833	179733833	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106118310	106118310	+	Missense_Mutation	SNP	A	T	T	rs139964001		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC150	284992	broad.mit.edu	37	2	197541345	197541345	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119063892	119063892	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93691946	93691946	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC27	148870	broad.mit.edu	37	1	3669282	3669282	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43111812	43111812	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180366130	180366130	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	63957745	63957745	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC48	79825	broad.mit.edu	37	3	128758527	128758527	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191087848	191087848	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111290845	111290845	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74A	90557	broad.mit.edu	37	2	132287375	132287375	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88A	55704	broad.mit.edu	37	2	55522684	55522684	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC91	55297	broad.mit.edu	37	12	28605394	28605394	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC99	54908	broad.mit.edu	37	5	169015427	169015427	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6292387	6292387	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL25	6370	broad.mit.edu	37	19	8127168	8127168	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49110580	49110580	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCPG1	9236	broad.mit.edu	37	15	55783208	55783208	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7649500	7649500	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD177	57126	broad.mit.edu	37	19	43857713	43857713	+	5'Flank	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD177	57126	broad.mit.edu	37	19	43859777	43859777	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158300906	158300906	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262614	158262614	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158324493	158324493	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1	131450	broad.mit.edu	37	3	112643989	112643989	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35837280	35837280	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300E	342510	broad.mit.edu	37	17	72608712	72608712	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LD	100131439	broad.mit.edu	37	17	72578327	72578327	+	Intron	SNP	G	T	T	rs141286243	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3G	917	broad.mit.edu	37	11	118223284	118223284	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157803248	157803248	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60885946	60885946	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60781206	60781206	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD8B	926	broad.mit.edu	37	2	87085311	87085311	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23066263	23066263	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23066266	23066266	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100961533	100961533	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC27	996	broad.mit.edu	37	17	45206824	45206824	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227300341	227300341	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42EP4	23580	broad.mit.edu	37	17	71281533	71281533	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7	83879	broad.mit.edu	37	2	174232056	174232056	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP2	200008	broad.mit.edu	37	1	54610303	54610303	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24491830	24491830	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509959	24509959	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65005524	65005524	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21756059	21756059	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21765193	21765193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21854814	21854814	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21883980	21883980	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH15	1013	broad.mit.edu	37	16	89246675	89246675	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95177971	95177971	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59170182	59170182	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59203752	59203752	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59206354	59206354	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59217507	59217507	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44845433	44845433	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25532249	25532249	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25585756	25585756	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61851501	61851501	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	62055384	62055384	+	5'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26906170	26906170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85970622	85970622	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105663038	105663038	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR4	389118	broad.mit.edu	37	3	49836286	49836286	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40085426	40085426	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP3	80279	broad.mit.edu	37	17	46058714	46058714	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKAL1	54901	broad.mit.edu	37	6	21065227	21065227	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL2	8999	broad.mit.edu	37	4	76532502	76532502	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL4	344387	broad.mit.edu	37	2	39405784	39405784	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN1A	1026	broad.mit.edu	37	6	36642771	36642771	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDON	50937	broad.mit.edu	37	11	125873991	125873991	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDR1	1038	broad.mit.edu	37	X	139866670	139866670	+	5'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL2	124359	broad.mit.edu	37	16	80638384	80638384	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4703736	4703736	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM5	1048	broad.mit.edu	37	19	42221645	42221645	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48677941	48677941	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPA	1058	broad.mit.edu	37	2	27016114	27016114	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104060924	104060924	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104061453	104061453	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100417903	100417903	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP120	153241	broad.mit.edu	37	5	122734967	122734967	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56865740	56865740	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117257898	117257898	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117261501	117261501	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP250	11190	broad.mit.edu	37	20	34092529	34092529	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERCAM	51148	broad.mit.edu	37	9	131186560	131186560	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERKL	375298	broad.mit.edu	37	2	182423172	182423172	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196977662	196977662	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196654312	196654312	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87796106	87796106	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB2	114336	broad.mit.edu	37	19	49535344	49535344	+	5'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49539626	49539626	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4433496	4433496	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50835857	50835857	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50857733	50857733	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50863408	50863408	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6710533	6710533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6196657	6196657	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6209508	6209508	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6215812	6215812	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53331002	53331002	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	402157	402157	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	439902	439902	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHODL	140578	broad.mit.edu	37	21	19632483	19632483	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109964796	109964796	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRFAM7A	89832	broad.mit.edu	37	15	30659662	30659662	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175622860	175622860	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61990856	61990856	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78917435	78917435	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST10	9486	broad.mit.edu	37	2	101022961	101022961	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST11	50515	broad.mit.edu	37	12	105151598	105151598	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST12	55501	broad.mit.edu	37	7	2472659	2472659	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45671848	45671848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CILP2	148113	broad.mit.edu	37	19	19655944	19655944	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIRH1A	84916	broad.mit.edu	37	16	69167644	69167644	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120146113	120146113	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120221783	120221783	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130941553	130941553	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53030734	53030734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46786657	46786657	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86894089	86894089	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86921274	86921274	+	3'UTR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA3P	9629	broad.mit.edu	37	1	87101776	87101777	+	RNA	DNP	TG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143028259	143028259	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN5	1184	broad.mit.edu	37	X	49778054	49778054	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN10	9071	broad.mit.edu	37	13	96212832	96212832	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN11	5010	broad.mit.edu	37	3	170140990	170140990	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN17	26285	broad.mit.edu	37	21	31538373	31538373	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC17A	388512	broad.mit.edu	37	19	14694031	14694031	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC17A	388512	broad.mit.edu	37	19	14694178	14694178	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1A	51267	broad.mit.edu	37	12	10226012	10226012	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1A	51267	broad.mit.edu	37	12	10226078	10226078	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4E	26253	broad.mit.edu	37	12	8687230	8687230	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC6A	93978	broad.mit.edu	37	12	8612117	8612117	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLINT1	9685	broad.mit.edu	37	5	157214823	157214823	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLINT1	9685	broad.mit.edu	37	5	157233056	157233056	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73811375	73811375	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP3	25999	broad.mit.edu	37	19	36517911	36517911	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLMN	79789	broad.mit.edu	37	14	95663070	95663070	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1L	81037	broad.mit.edu	37	5	1325076	1325076	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140123634	140123634	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140284952	140284952	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN3	9746	broad.mit.edu	37	12	7290632	7290632	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100543590	100543590	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA3	1261	broad.mit.edu	37	2	98996642	98996642	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58572800	58572800	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT2	4848	broad.mit.edu	37	12	70713103	70713103	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT2	4848	broad.mit.edu	37	12	70713110	70713110	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246811284	246811284	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41316138	41316138	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41337686	41337686	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205031440	205031440	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	3083931	3083931	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99715818	99715818	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146741063	146741063	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125504945	125504945	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125547436	125547436	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG6	57511	broad.mit.edu	37	13	40293979	40293979	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103399945	103399945	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103453205	103453205	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121262964	121262964	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121267700	121267700	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121295855	121295855	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101832185	101832185	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46888096	46888096	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46888412	46888412	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46898158	46898158	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL20A1	57642	broad.mit.edu	37	20	61943434	61943434	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL20A1	57642	broad.mit.edu	37	20	61943875	61943875	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL20A1	57642	broad.mit.edu	37	20	61951687	61951687	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	55924961	55924961	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139768047	139768047	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139838846	139838846	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177679623	177679623	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109740455	109740455	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116931016	116931016	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116984441	116984441	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117012824	117012824	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7413034	7413034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48379225	48379225	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189858694	189858694	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110833579	110833579	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111121563	111121563	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227954711	227954711	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137664635	137664635	+	Splice_Site	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137708881	137708882	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189898877	189898877	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10099904	10099904	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238249368	238249368	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238303368	238303368	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130282042	130282042	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130289604	130289604	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48606802	48606802	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48629273	48629273	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70948970	70948970	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3665311	3665311	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3691447	3691447	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD3	23412	broad.mit.edu	37	10	22607350	22607350	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD6	170622	broad.mit.edu	37	13	76112043	76112043	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ3	51805	broad.mit.edu	37	6	99819233	99819233	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47667122	47667122	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83224530	83224530	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE8	144402	broad.mit.edu	37	12	39161627	39161627	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPPED1	55313	broad.mit.edu	37	16	12897540	12897540	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211464252	211464252	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211539650	211539650	+	Missense_Mutation	SNP	G	T	T	rs140578009	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3	51692	broad.mit.edu	37	2	9581907	9581907	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF6	11052	broad.mit.edu	37	12	69656269	69656269	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF6	11052	broad.mit.edu	37	12	69656271	69656271	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207782848	207782848	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197396583	197396583	+	Splice_Site	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137613183	137613183	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHBP	1393	broad.mit.edu	37	5	76259265	76259265	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43910880	43910880	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR2	1395	broad.mit.edu	37	7	30695457	30695457	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5827414	5827414	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5853114	5853114	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCC	9696	broad.mit.edu	37	1	17183313	17183313	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC2	200186	broad.mit.edu	37	1	153925976	153925976	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB1	1414	broad.mit.edu	37	22	26995455	26995455	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB1	1414	broad.mit.edu	37	22	27008146	27008146	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGA	1418	broad.mit.edu	37	2	209028143	209028143	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGB	1419	broad.mit.edu	37	2	209010557	209010557	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115276249	115276249	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RB	1439	broad.mit.edu	37	22	37332548	37332548	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4645293	4645293	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113304930	113304930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113317037	113317037	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113326690	113326690	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113933969	113933969	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114186168	114186168	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN1S1	1446	broad.mit.edu	37	4	70810635	70810635	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP3	80034	broad.mit.edu	37	2	166536110	166536110	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST9L	128821	broad.mit.edu	37	20	23549098	23549098	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTHRC1	115908	broad.mit.edu	37	8	104390389	104390389	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11117512	11117512	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11397016	11397016	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSG	1511	broad.mit.edu	37	14	25043876	25043876	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSK	1513	broad.mit.edu	37	1	150779315	150779315	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70255878	70255878	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL9	23113	broad.mit.edu	37	6	43164071	43164071	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111744654	111744654	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49032794	49032794	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49032885	49032885	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49052637	49052637	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL13	10563	broad.mit.edu	37	4	78527109	78527109	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf36	79742	broad.mit.edu	37	X	45013396	45013397	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf36	79742	broad.mit.edu	37	X	45051245	45051245	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf40A	91966	broad.mit.edu	37	X	148627288	148627288	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf57	55086	broad.mit.edu	37	X	105879769	105879769	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36122805	36122805	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf65	158830	broad.mit.edu	37	X	70326516	70326516	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37651347	37651347	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143956441	143956442	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP21A2	1589	broad.mit.edu	37	6	32006974	32006974	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26B1	56603	broad.mit.edu	37	2	72359460	72359460	+	Missense_Mutation	SNP	C	T	T	rs148075682		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F22	126410	broad.mit.edu	37	19	15651462	15651463	+	Missense_Mutation	DNP	CG	GA	GA	rs139163760		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15763586	15763586	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7A1	1581	broad.mit.edu	37	8	59404216	59404216	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65537045	65537045	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20140022	20140022	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D2HGDH	728294	broad.mit.edu	37	2	242707190	242707190	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58514663	58514663	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72049909	72049909	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72050030	72050030	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109288032	109288032	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBH	1621	broad.mit.edu	37	9	136501727	136501727	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100676590	100676590	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L1	139170	broad.mit.edu	37	X	125685886	125685886	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF16	54876	broad.mit.edu	37	4	17805188	17805188	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF5	8816	broad.mit.edu	37	14	69585059	69585059	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF6	55827	broad.mit.edu	37	1	167974027	167974027	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF6	55827	broad.mit.edu	37	1	168025550	168025550	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD2	131566	broad.mit.edu	37	3	98530083	98530083	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50742070	50742070	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50936982	50936982	+	Silent	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31327816	31327816	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6662548	6662548	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155256115	155256115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK3	85443	broad.mit.edu	37	3	36779327	36779327	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95121216	95121216	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110574132	110574132	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD1	80821	broad.mit.edu	37	14	53529766	53529766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD1	80821	broad.mit.edu	37	14	53619576	53619576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103908038	103908038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162724443	162724443	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162745352	162745352	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX12	440081	broad.mit.edu	37	12	9581846	9581846	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX19A	55308	broad.mit.edu	37	16	70398906	70398906	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX1	1653	broad.mit.edu	37	2	15760265	15760265	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49239371	49239371	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX26B	203522	broad.mit.edu	37	X	134703357	134703357	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX43	55510	broad.mit.edu	37	6	74116137	74116137	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB115	245929	broad.mit.edu	37	20	29847348	29847348	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126146038	126146038	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197479885	197479885	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31566471	31566471	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33055090	33055090	+	3'UTR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DERA	51071	broad.mit.edu	37	12	16189280	16189280	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19077012	19077012	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	185969722	185969722	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137293720	137293720	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137406807	137406807	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50129634	50129634	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKZ	8525	broad.mit.edu	37	11	46393118	46393118	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR7	1717	broad.mit.edu	37	11	71150017	71150017	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX29	54505	broad.mit.edu	37	5	54585879	54585879	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39074228	39074228	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80677676	80677676	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2A	23181	broad.mit.edu	37	21	47987386	47987386	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	387305	387305	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP2	85455	broad.mit.edu	37	15	40659862	40659862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKC1	1736	broad.mit.edu	37	X	153993990	153993990	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83180436	83180436	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83878159	83878159	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84028240	84028240	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79565393	79565393	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79576624	79576624	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35369813	35369813	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35370074	35370074	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101194828	101194828	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX6	1750	broad.mit.edu	37	7	96637038	96637038	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBX1	127343	broad.mit.edu	37	1	46972667	46972667	+	5'Flank	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32398633	32398633	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32486670	32486670	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78324471	78324471	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78347268	78347268	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78350088	78350088	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT1	1761	broad.mit.edu	37	9	847035	847035	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTB1	63948	broad.mit.edu	37	1	53925146	53925146	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTB1	63948	broad.mit.edu	37	1	53932273	53932273	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMTF1	9988	broad.mit.edu	37	7	86815334	86815334	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124325847	124325847	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21789247	21789247	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH12	201625	broad.mit.edu	37	3	57505353	57505353	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7722377	7722377	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21038383	21038383	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21045250	21045250	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH6	1768	broad.mit.edu	37	2	84784942	84784942	+	Silent	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH6	1768	broad.mit.edu	37	2	84784945	84784945	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196746483	196746483	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196859619	196859619	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38795910	38795910	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38885138	38885138	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38980322	38980322	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11593083	11593083	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11738155	11738155	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34512327	34512327	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB6	10049	broad.mit.edu	37	7	157174883	157174883	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132219600	132219600	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132235541	132235541	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC1	64215	broad.mit.edu	37	10	22048630	22048630	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230456378	230456378	+	Missense_Mutation	SNP	C	A	A	rs141603946		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	131001614	131001614	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM2	1785	broad.mit.edu	37	19	10934371	10934371	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220238938	220238938	+	3'UTR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOC2A	8448	broad.mit.edu	37	16	30021412	30021412	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169145853	169145853	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169445819	169445819	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99520503	99520503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67425125	67425125	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73219915	73219915	+	Intron	SNP	G	T	T	rs34679400		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73219972	73219972	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116485342	116485342	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116525895	116525895	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154379755	154379755	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154379774	154379774	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154677481	154677481	+	Intron	SNP	C	A	A	rs142797584	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154679411	154679411	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA2	151871	broad.mit.edu	37	3	109027977	109027977	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA3	359787	broad.mit.edu	37	12	7867599	7867599	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54137695	54137695	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105441800	105441800	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113287585	113287585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100503543	100503543	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100515651	100515652	+	3'UTR	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28662236	28662236	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41561185	41561185	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28916564	28916564	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28918286	28918286	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29125888	29125888	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29125986	29125986	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29055792	29055792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28971189	28971189	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56371471	56371471	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56504070	56504070	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32459515	32459515	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3	196403	broad.mit.edu	37	12	58000747	58000747	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45386463	45386463	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45387703	45387703	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45400285	45400285	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP21	63904	broad.mit.edu	37	X	44703497	44703497	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167086536	167086536	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP5P	574029	broad.mit.edu	37	1	228786444	228786444	+	3'UTR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57678864	57678864	+	5'Flank	SNP	G	C	C	rs114993682	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL1	1855	broad.mit.edu	37	1	1275302	1275302	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102446176	102446176	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	102992159	102992159	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	102992199	102992199	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103270430	103270430	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK3	8444	broad.mit.edu	37	1	206821658	206821658	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71753139	71753139	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71816909	71816909	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131755543	131755543	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43637203	43637203	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECD	11319	broad.mit.edu	37	10	74912287	74912287	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECHDC1	55862	broad.mit.edu	37	6	127611311	127611311	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN2	1907	broad.mit.edu	37	1	41946715	41946715	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRB	1910	broad.mit.edu	37	13	78493460	78493460	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106406500	106406500	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62127098	62127098	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28410128	28410128	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28435016	28435016	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82422983	82422983	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13642113	13642113	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL8	80864	broad.mit.edu	37	6	32135778	32135778	+	3'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38338726	38338726	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38407277	38407277	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55214220	55214220	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55231427	55231427	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110915780	110915780	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGR1	1958	broad.mit.edu	37	5	137802346	137802346	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT2	10919	broad.mit.edu	37	6	31855786	31855786	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37374721	37374721	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186501346	186501346	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186504801	186504801	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E	1977	broad.mit.edu	37	4	99806244	99806244	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184043038	184043038	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G3	8672	broad.mit.edu	37	1	21191656	21191656	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF6	3692	broad.mit.edu	37	20	33867799	33867799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAC2	60528	broad.mit.edu	37	17	12915089	12915089	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37172661	37172661	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37253043	37253043	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMOD3	84173	broad.mit.edu	37	2	85590289	85590290	+	Splice_Site	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP2	55250	broad.mit.edu	37	18	33724961	33724961	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79357397	79357397	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6919454	6919457	+	Intron	DEL	TGTG	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14765950	14765950	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAM	10117	broad.mit.edu	37	4	71497577	71497577	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43930241	43930241	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132201185	132201185	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132470975	132470975	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132476070	132476070	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132535320	132535320	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131201331	131201331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131215588	131215588	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5406747	5406747	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111595539	111595539	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143092462	143092462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222307544	222307544	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66280039	66280039	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97167557	97167557	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134898592	134898592	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134898709	134898709	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134920489	134920489	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHX3	79852	broad.mit.edu	37	19	15341721	15341721	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110294416	110294416	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43462494	43462494	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37868064	37868064	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212288980	212288980	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212495163	212495163	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103506511	103506511	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103514736	103514736	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50736571	50736571	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESM1	11082	broad.mit.edu	37	5	54280877	54280877	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR2	2100	broad.mit.edu	37	14	64746747	64746747	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFA	2108	broad.mit.edu	37	15	76523756	76523756	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETNK1	55500	broad.mit.edu	37	12	22837317	22837317	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV3L	440695	broad.mit.edu	37	1	157062580	157062580	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV5	2119	broad.mit.edu	37	3	185798879	185798879	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74015578	74015578	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXD3	54932	broad.mit.edu	37	9	140249228	140249228	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXO1	9156	broad.mit.edu	37	1	242016740	242016740	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3L	283849	broad.mit.edu	37	16	67223470	67223470	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57688935	57688935	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108383973	108383973	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72129173	72129173	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72184101	72184101	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11R	50848	broad.mit.edu	37	1	160968656	160968656	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169526046	169526046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FADS2	9415	broad.mit.edu	37	11	61632457	61632457	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105A	54491	broad.mit.edu	37	5	14607340	14607340	+	Intron	DEL	A	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105B	90268	broad.mit.edu	37	5	14687520	14687520	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM113B	91523	broad.mit.edu	37	12	47529467	47529467	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131520421	131520421	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220046857	220046857	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220046971	220046971	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139163907	139163907	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139180119	139180119	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89679943	89679943	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153A	285596	broad.mit.edu	37	5	177167641	177167641	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187608278	187608278	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187627476	187627476	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM177A1	283635	broad.mit.edu	37	14	35522515	35522515	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45495057	45495057	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188A	80013	broad.mit.edu	37	10	15831173	15831173	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46222982	46222982	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM41C	284593	broad.mit.edu	37	1	808799	808799	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46B	115572	broad.mit.edu	37	1	27332971	27332971	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46B	115572	broad.mit.edu	37	1	27333053	27333053	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46D	169966	broad.mit.edu	37	X	79698553	79698553	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027144	37027144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028190	37028190	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37029325	37029325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM57B	83723	broad.mit.edu	37	16	30038201	30038201	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177247804	177247804	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	11991610	11991610	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12236802	12236802	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM69A	388650	broad.mit.edu	37	1	93341943	93341943	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM69A	388650	broad.mit.edu	37	1	93396969	93396969	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73A	374986	broad.mit.edu	37	1	78277407	78277407	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627457	43627457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54791332	54791332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM98C	147965	broad.mit.edu	37	19	38899416	38899416	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45644869	45644869	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29460819	29460819	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126240586	126240586	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45939456	45939456	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45943050	45943050	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127616079	127616079	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8196580	8196580	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8201467	8201467	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15936789	15936789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15936818	15936818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO11	80204	broad.mit.edu	37	2	48059590	48059590	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO18	84893	broad.mit.edu	37	10	5947987	5947987	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO21	23014	broad.mit.edu	37	12	117593705	117593705	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO24	26261	broad.mit.edu	37	7	100190547	100190547	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO3	26273	broad.mit.edu	37	11	33792333	33792333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18675739	18675739	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW12	285231	broad.mit.edu	37	3	48423159	48423159	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW2	26190	broad.mit.edu	37	9	123526797	123526797	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137801875	137801875	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137809691	137809691	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157771232	157771232	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157771492	157771492	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157737468	157737468	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157665424	157665424	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157555977	157555977	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157508921	157508921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124978581	124978581	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125113558	125113558	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZ1	9638	broad.mit.edu	37	11	125325645	125325645	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF1	389549	broad.mit.edu	37	7	121942191	121942191	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155487754	155487754	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD2	221472	broad.mit.edu	37	6	36981295	36981295	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137715148	137715148	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102375185	102375185	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1OP	11116	broad.mit.edu	37	6	167447483	167447483	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176519788	176519788	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176519884	176519884	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34092555	34092555	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34092557	34092557	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34322886	34322886	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGF	2277	broad.mit.edu	37	X	15376214	15376214	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72470126	72470126	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72744205	72744205	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152326453	152326453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279055	152279055	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282354	152282354	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283677	152283677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84604788	84604788	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84609178	84609178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153588029	153588029	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58062737	58062737	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128489091	128489091	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128494826	128494826	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28893703	28893703	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28959104	28959104	+	Silent	SNP	G	T	T	rs146170931		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240307231	240307231	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240492339	240492339	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240497359	240497359	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171221523	171221523	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171168447	171168447	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171177857	171177857	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO4	2329	broad.mit.edu	37	1	171310836	171310836	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147022058	147022058	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159618734	159618734	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159651151	159651151	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC7	163479	broad.mit.edu	37	1	109270513	109270513	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89403612	89403612	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89405207	89405207	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424067	89424067	+	Missense_Mutation	SNP	C	A	A	rs145208476		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXI1	2299	broad.mit.edu	37	5	169535124	169535124	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN1	8456	broad.mit.edu	37	17	26857695	26857695	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71008619	71008619	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR2	2358	broad.mit.edu	37	19	52272029	52272029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR2	2358	broad.mit.edu	37	19	52272799	52272799	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14747250	14747250	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14851592	14851592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14868959	14868959	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39435606	39435606	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85913604	85913604	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85926728	85926728	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131214011	131214011	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49376600	49376600	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100183082	100183082	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48621362	48621362	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32783213	32783213	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32805373	32805373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32868765	32868765	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44975581	44975581	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1L	83856	broad.mit.edu	37	9	108287714	108287714	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49190600	49190600	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL4	23105	broad.mit.edu	37	5	132939708	132939708	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162307027	162307027	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162459314	162459314	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61902562	61902562	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FURIN	5045	broad.mit.edu	37	15	91423004	91423004	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXN	2395	broad.mit.edu	37	9	71686180	71686180	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD4	53828	broad.mit.edu	37	10	43871373	43871373	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD6	53826	broad.mit.edu	37	11	117711949	117711949	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29599290	29599290	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46314638	46314638	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161117146	161117146	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB2	2561	broad.mit.edu	37	5	160763691	160763691	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806283	26806283	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806345	26806345	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRD	2563	broad.mit.edu	37	1	1956518	1956518	+	Intron	SNP	G	T	T	rs112537498		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46099196	46099196	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89913274	89913274	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26569879	26569879	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST1	9514	broad.mit.edu	37	22	30951365	30951365	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST4	79690	broad.mit.edu	37	7	99764641	99764641	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31168704	31168704	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31168710	31168710	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158152845	158152845	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT6	11226	broad.mit.edu	37	12	51752153	51752153	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL1	57452	broad.mit.edu	37	14	69806305	69806305	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL4	374378	broad.mit.edu	37	11	11314629	11314629	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	172735780	172735780	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALR1	2587	broad.mit.edu	37	18	74963220	74963220	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANC	2595	broad.mit.edu	37	15	42644222	42644222	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAP43	2596	broad.mit.edu	37	3	115342539	115342539	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAP43	2596	broad.mit.edu	37	3	115439562	115439562	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36027810	36027811	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128061359	128061359	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS6	2621	broad.mit.edu	37	13	114551168	114551168	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9821265	9821265	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9830018	9830018	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9837476	9837476	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9846424	9846424	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8100193	8100193	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD1	57798	broad.mit.edu	37	7	92083958	92083958	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153800325	153800325	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA2	57704	broad.mit.edu	37	9	35738836	35738836	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP3	2635	broad.mit.edu	37	1	89476451	89476451	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89654458	89654458	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP6	163351	broad.mit.edu	37	1	89849270	89849270	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109066018	109066018	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120599243	120599243	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120628063	120628063	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT2	2651	broad.mit.edu	37	6	10556854	10556854	+	Intron	DEL	C	-	-	rs55930620		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT2	2651	broad.mit.edu	37	6	10586723	10586723	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72611836	72611836	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74764488	74764488	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74865578	74865578	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD2	54857	broad.mit.edu	37	X	69646190	69646190	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGA2	23062	broad.mit.edu	37	16	23494216	23494216	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH1	2688	broad.mit.edu	37	17	61994595	61994595	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31014634	31014634	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42465576	42465576	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42467044	42467044	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42468123	42468123	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150416163	150416163	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150417496	150417496	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA9	81025	broad.mit.edu	37	1	39340852	39340853	+	Nonsense_Mutation	DNP	GG	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJC1	10052	broad.mit.edu	37	17	42882703	42882703	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKAP1	80318	broad.mit.edu	37	9	86399575	86399575	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L3	112937	broad.mit.edu	37	11	134147856	134147856	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L3	112937	broad.mit.edu	37	11	134163121	134163121	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57861912	57861912	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121744024	121744024	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1L2	144321	broad.mit.edu	37	12	75785217	75785217	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLMN	11146	broad.mit.edu	37	1	92756866	92756866	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151304011	151304011	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14625417	14625417	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102977233	102977233	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102978817	102978817	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183909681	183909681	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183920378	183920378	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183942644	183942644	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155628452	155628452	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155649697	155649697	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11867257	11867257	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56388845	56388845	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57430252	57430252	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB3	2784	broad.mit.edu	37	12	6952808	6952808	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL2	29889	broad.mit.edu	37	1	38034454	38034454	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA1	2800	broad.mit.edu	37	9	127660853	127660853	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37402901	37402901	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6B	55889	broad.mit.edu	37	15	72957470	72957470	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217784288	217784288	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132834060	132834060	+	Intron	DEL	A	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPI	2821	broad.mit.edu	37	19	34884875	34884875	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135427823	135427823	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135455194	135455194	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135469826	135469826	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135485335	135485335	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135487778	135487778	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47678337	47678337	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22390299	22390299	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22436933	22436933	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR137B	7107	broad.mit.edu	37	1	236341796	236341796	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043324	20043324	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25840010	25840010	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR172B	55065	broad.mit.edu	37	17	4937715	4937715	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR22	2845	broad.mit.edu	37	7	107114721	107114721	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR32	2854	broad.mit.edu	37	19	51274316	51274316	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR32	2854	broad.mit.edu	37	19	51274424	51274424	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR56	9289	broad.mit.edu	37	16	57695812	57695812	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR56	9289	broad.mit.edu	37	16	57697456	57697456	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR78	27201	broad.mit.edu	37	4	8584301	8584301	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR82	27197	broad.mit.edu	37	X	41586498	41586498	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR83	10888	broad.mit.edu	37	11	94129655	94129655	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR85	54329	broad.mit.edu	37	7	112723879	112723879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90012412	90012412	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117127521	117127521	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176024932	176024932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176026853	176026853	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN2	9721	broad.mit.edu	37	10	47000059	47000059	+	Silent	SNP	G	T	T	rs138975211		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX8	493869	broad.mit.edu	37	5	54456891	54456891	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123471265	123471265	+	Intron	SNP	G	C	C	rs141277803	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	152870273	152870273	+	5'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153182038	153182038	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158282139	158282139	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87628918	87628918	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102483357	102483357	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37267485	37267485	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37291209	37291209	+	Silent	SNP	G	A	A	rs138685291	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9857738	9857738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9857801	9857801	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9858253	9858253	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13719974	13719974	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	14018915	14018915	+	Frame_Shift_Del	DEL	G	-	-	rs77299791	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2C	2905	broad.mit.edu	37	17	72851274	72851274	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP2	80852	broad.mit.edu	37	3	14547155	14547155	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146720447	146720447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM4	2914	broad.mit.edu	37	6	33996102	33996102	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88330421	88330421	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7456833	7456833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126249334	126249334	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRWD1	83743	broad.mit.edu	37	19	48954149	48954149	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMB	55876	broad.mit.edu	37	17	38065181	38065181	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1	83445	broad.mit.edu	37	12	13243462	13243462	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSK3B	2932	broad.mit.edu	37	3	119635056	119635056	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52662463	52662463	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2H1	2965	broad.mit.edu	37	11	18369250	18369250	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2I	2969	broad.mit.edu	37	7	74119614	74119614	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27476638	27476638	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP1	9567	broad.mit.edu	37	22	39112749	39112749	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156634168	156634168	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156634571	156634571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1B3	2983	broad.mit.edu	37	4	156711063	156711063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14778850	14778850	+	Splice_Site	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPC	2995	broad.mit.edu	37	2	127451549	127451549	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMA	3001	broad.mit.edu	37	5	54401522	54401522	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMB	3002	broad.mit.edu	37	14	25101090	25101090	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMH	2999	broad.mit.edu	37	14	25077440	25077440	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHB	3032	broad.mit.edu	37	2	26502894	26502894	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82937365	82937365	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82937398	82937398	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82948412	82948412	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS1	115106	broad.mit.edu	37	18	43698210	43698210	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS6	54801	broad.mit.edu	37	9	19058167	19058167	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBD	3045	broad.mit.edu	37	11	5255522	5255522	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5290849	5290849	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30659585	30659585	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCLS1	3059	broad.mit.edu	37	3	121376322	121376322	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73659811	73659811	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55113565	55113565	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55120260	55120260	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55145212	55145212	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCST	10870	broad.mit.edu	37	19	36394806	36394806	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240056263	240056263	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC5	10014	broad.mit.edu	37	17	42155769	42155769	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48188756	48188756	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50546735	50546735	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGF	3068	broad.mit.edu	37	1	156714928	156714928	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242195624	242195624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7A	727957	broad.mit.edu	37	8	145218704	145218705	+	5'UTR	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41038867	41038867	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41058151	41058151	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43436462	43436462	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43484004	43484004	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43505959	43505959	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43547716	43547716	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93796927	93796927	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93800625	93800625	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93839147	93839147	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63930837	63930837	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28389206	28389206	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91793930	91793930	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91818090	91818090	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGFAC	3083	broad.mit.edu	37	4	3444356	3444356	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81335050	81335050	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81346533	81346533	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81355333	81355333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGSNAT	138050	broad.mit.edu	37	8	43037331	43037331	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210797046	210797046	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL1	84439	broad.mit.edu	37	14	100118789	100118790	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF3A	64344	broad.mit.edu	37	19	46808466	46808466	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75203140	75203140	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114508811	114508812	+	Frame_Shift_Ins	INS	-	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114514364	114514364	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139416276	139416276	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK3	10114	broad.mit.edu	37	11	33360519	33360519	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AC	8334	broad.mit.edu	37	6	26124779	26124779	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AE	3012	broad.mit.edu	37	6	26216315	26216315	+	5'Flank	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BF	8343	broad.mit.edu	37	6	26199826	26199826	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3A	8350	broad.mit.edu	37	6	26021048	26021048	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3B	8358	broad.mit.edu	37	6	26032069	26032069	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3G	8355	broad.mit.edu	37	6	26271483	26271483	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK3	3101	broad.mit.edu	37	5	176315748	176315748	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK3	3101	broad.mit.edu	37	5	176317466	176317466	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71009880	71009880	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31248807	31248807	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-J	3137	broad.mit.edu	37	6	29977389	29977393	+	Frame_Shift_Del	DEL	CTTCT	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148759310	148759310	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148791089	148791089	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185704050	185704050	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186062560	186062560	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186120274	186120274	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55406845	55406845	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGXB4	10042	broad.mit.edu	37	22	35679974	35679974	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HN1L	90861	broad.mit.edu	37	16	1748976	1748976	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60328550	60328550	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27134253	27134253	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA4	3201	broad.mit.edu	37	7	27168603	27168603	+	3'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB3	3213	broad.mit.edu	37	17	46628019	46628019	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC12	3228	broad.mit.edu	37	12	54350313	54350313	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC4	3221	broad.mit.edu	37	12	54422766	54422766	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD3	3232	broad.mit.edu	37	2	177036982	177036982	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS1	3257	broad.mit.edu	37	10	100182214	100182214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRC	3270	broad.mit.edu	37	19	49657621	49657621	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192277	152192277	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HR	55806	broad.mit.edu	37	8	21986489	21986489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38647418	38647418	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7	51478	broad.mit.edu	37	1	162766534	162766534	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119958100	119958100	+	Missense_Mutation	SNP	C	T	T	rs139191056		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119987819	119987819	+	3'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B7	80270	broad.mit.edu	37	16	30998105	30998105	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA1L	3305	broad.mit.edu	37	6	31777852	31777852	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB11	51668	broad.mit.edu	37	1	54405720	54405720	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22199989	22199989	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATSF1	27336	broad.mit.edu	37	X	135592434	135592434	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1E	3354	broad.mit.edu	37	6	87725346	87725346	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113860404	113860404	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3C	170572	broad.mit.edu	37	3	183770791	183770791	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3C	170572	broad.mit.edu	37	3	183773093	183773093	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA3	94031	broad.mit.edu	37	4	8307701	8307701	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3211514	3211514	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53574724	53574724	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53644083	53644083	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70900088	70900088	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71015470	71015470	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95004448	95004448	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH1	3417	broad.mit.edu	37	2	209104020	209104020	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT1B	439996	broad.mit.edu	37	10	91144107	91144107	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25699239	25699239	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65686622	65686622	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65686760	65686760	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47117225	47117225	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47118740	47118740	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47118892	47118892	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160461834	160461834	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP1	3484	broad.mit.edu	37	7	45930211	45930212	+	Missense_Mutation	DNP	CC	GA	GA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP1	3484	broad.mit.edu	37	7	45931685	45931685	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151163172	151163172	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF11	152404	broad.mit.edu	37	3	118648857	118648857	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117131682	117131682	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117150557	117150557	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF1	10320	broad.mit.edu	37	7	50444306	50444306	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF3	22806	broad.mit.edu	37	17	37995691	37995691	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IK	3550	broad.mit.edu	37	5	140041211	140041211	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67816660	67816660	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17A	3605	broad.mit.edu	37	6	52051334	52051334	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RB	55540	broad.mit.edu	37	3	53883601	53883601	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18R1	8809	broad.mit.edu	37	2	103012981	103012981	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18R1	8809	broad.mit.edu	37	2	103013214	103013214	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29959652	29959652	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27460382	27460382	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL23R	149233	broad.mit.edu	37	1	67705857	67705857	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL23R	149233	broad.mit.edu	37	1	67705957	67705957	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1467573	1467574	+	Intron	INS	-	TC	TC			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1471274	1471274	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3	3562	broad.mit.edu	37	5	131398035	131398035	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27373906	27373906	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3118364	3118364	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155231119	155231119	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155233587	155233587	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166904518	166904518	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	110526731	110526731	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	111161579	111161579	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH1	3614	broad.mit.edu	37	7	128033139	128033139	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62582842	62582842	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING4	51147	broad.mit.edu	37	12	6760616	6760616	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30795470	30795470	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4A	3631	broad.mit.edu	37	2	99169339	99169339	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143003332	143003333	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143114397	143114397	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143235915	143235915	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5F	22876	broad.mit.edu	37	10	121557178	121557178	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSL4	3641	broad.mit.edu	37	9	5231742	5231742	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156818752	156818752	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77671418	77671419	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62417535	62417535	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44426701	44426701	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44429990	44429990	+	Silent	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCA1	79781	broad.mit.edu	37	2	237406078	237406078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75954354	75954354	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC1	9922	broad.mit.edu	37	3	12944234	12944234	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	247571	247571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78764260	78764260	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRGC	56269	broad.mit.edu	37	19	44222873	44222873	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227663167	227663167	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977664	107977664	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX1	79192	broad.mit.edu	37	5	3601189	3601189	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISM1	140862	broad.mit.edu	37	20	13260326	13260326	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISM1	140862	broad.mit.edu	37	20	13260371	13260371	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISX	91464	broad.mit.edu	37	22	35481642	35481642	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145538885	145538885	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145539090	145539090	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68643001	68643001	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2B	3674	broad.mit.edu	37	17	42457234	42457234	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182389954	182389954	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA7	3679	broad.mit.edu	37	12	56088218	56088218	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA7	3679	broad.mit.edu	37	12	56097047	56097047	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15714798	15714798	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495130	30495130	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30507518	30507518	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30510525	30510525	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187541904	187541904	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31374570	31374570	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70522270	70522271	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73727093	73727093	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124492670	124492670	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124528086	124528086	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20438362	20438362	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGBL1	9358	broad.mit.edu	37	13	102344976	102344976	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52816058	52816058	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7786920	7786920	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160849175	160849175	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160853328	160853328	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26835587	26835587	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR3	3710	broad.mit.edu	37	6	33646533	33646533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR3	3710	broad.mit.edu	37	6	33648392	33648392	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35183306	35183306	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35199148	35199148	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24525023	24525023	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK1	3716	broad.mit.edu	37	1	65339033	65339033	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK3	3718	broad.mit.edu	37	19	17937597	17937597	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6082119	6082119	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM3	83700	broad.mit.edu	37	11	134014360	134014360	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMY	133746	broad.mit.edu	37	5	78573766	78573766	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87677997	87677997	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87678562	87678562	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124237357	124237357	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170356090	170356090	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA10	3744	broad.mit.edu	37	1	111060306	111060306	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5021978	5021978	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5022022	5022022	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA5	3741	broad.mit.edu	37	12	5153695	5153695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB2	8514	broad.mit.edu	37	1	6147562	6147562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNF1	3754	broad.mit.edu	37	2	11053201	11053201	+	Missense_Mutation	SNP	G	T	T	rs147777200		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNG3	170850	broad.mit.edu	37	2	42671100	42671100	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150647499	150647499	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49944157	49944157	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49951180	49951180	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49951281	49951281	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163241508	163241508	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	170145847	170145847	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21319454	21319454	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ1	3758	broad.mit.edu	37	11	128708958	128708958	+	3'UTR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ1	3758	broad.mit.edu	37	11	128709558	128709558	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68171958	68171958	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155711146	155711146	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118960625	118960625	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215259913	215259913	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78649330	78649330	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78850213	78850214	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154794758	154794758	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138669205	138669205	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196398799	196398799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36793116	36793116	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36442578	36442578	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	66947681	66947681	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44133384	44133384	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94731346	94731346	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94731482	94731482	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202715449	202715449	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55968157	55968157	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS3	10656	broad.mit.edu	37	8	136637778	136637778	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHK	3795	broad.mit.edu	37	2	27322123	27322123	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0125	9834	broad.mit.edu	37	14	106357110	106357110	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0513	9764	broad.mit.edu	37	16	85112585	85112585	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0528	9847	broad.mit.edu	37	12	22624354	22624354	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0664	23277	broad.mit.edu	37	17	2604050	2604050	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8824925	8824925	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8829122	8829122	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1033	23325	broad.mit.edu	37	12	105543557	105543557	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72285877	72285878	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324	57535	broad.mit.edu	37	1	109714467	109714467	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94120419	94120419	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95508630	95508630	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226378082	226378082	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100090327	100090327	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138536986	138536986	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138593715	138593715	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1920390	1920390	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36841717	36841717	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1984	84960	broad.mit.edu	37	9	139694873	139694873	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44819546	44819546	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44869649	44869649	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28058003	28058003	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10335490	10335490	+	Missense_Mutation	SNP	A	T	T	rs141350047	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39751055	39751055	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245530532	245530532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57965898	57965898	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57969239	57969239	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149806319	149806319	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL2	84063	broad.mit.edu	37	19	36350479	36350479	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL2	84063	broad.mit.edu	37	19	36352122	36352122	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF14	136259	broad.mit.edu	37	7	130418206	130418206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44569349	44569349	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC4	54758	broad.mit.edu	37	16	87742113	87742113	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202878154	202878154	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30350629	30350629	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL17	339451	broad.mit.edu	37	1	900324	900324	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173685210	173685210	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173702931	173702931	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL26	55295	broad.mit.edu	37	19	18780069	18780069	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL7	55975	broad.mit.edu	37	7	23180421	23180421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL7	55975	broad.mit.edu	37	7	23180432	23180432	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL7	55975	broad.mit.edu	37	7	23205441	23205441	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK4	9622	broad.mit.edu	37	19	51412842	51412842	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRK1	22914	broad.mit.edu	37	12	10541490	10541490	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241752098	241752098	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123041816	123041816	+	Intron	SNP	G	C	C	rs145524830	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123070121	123070121	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123105090	123105090	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160233407	160233407	+	Intron	DEL	T	-	-	rs112603907		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA6	23633	broad.mit.edu	37	1	32626214	32626214	+	Splice_Site	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152732303	152732303	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT17	3872	broad.mit.edu	37	17	39775829	39775829	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT28	162605	broad.mit.edu	37	17	38953456	38953456	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53039430	53039430	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53184900	53184900	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53201415	53201415	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52911461	52911461	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52845379	52845379	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT71	112802	broad.mit.edu	37	12	52943891	52943891	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT72	140807	broad.mit.edu	37	12	52992867	52992867	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT73	319101	broad.mit.edu	37	12	53004692	53004692	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52965275	52965275	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52825467	52825467	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT86	3892	broad.mit.edu	37	12	52647092	52647092	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT9	3857	broad.mit.edu	37	17	39726288	39726288	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-10	353333	broad.mit.edu	37	21	46057504	46057504	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-1	386677	broad.mit.edu	37	21	45960051	45960051	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP12-4	386684	broad.mit.edu	37	21	46074485	46074485	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP20-1	337975	broad.mit.edu	37	21	31988931	31988931	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP21-1	337977	broad.mit.edu	37	21	32127867	32127867	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-4	84616	broad.mit.edu	37	17	39316800	39316800	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-2	337967	broad.mit.edu	37	21	31971073	31971073	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTCAP2	200185	broad.mit.edu	37	1	155145212	155145212	+	Splice_Site	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153130872	153130872	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153132065	153132065	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130454910	130454910	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACRT	90070	broad.mit.edu	37	12	55025397	55025397	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6961756	6961756	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6966160	6966160	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7079972	7079972	+	Splice_Site	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129370954	129370954	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129478691	129478691	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129571509	129571509	+	Intron	SNP	T	C	C	rs140467482	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129582044	129582044	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129759733	129759733	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112476088	112476088	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60892796	60892796	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209824133	209824133	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107671272	107671272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107732065	107732065	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183100547	183100547	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183197879	183197879	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133927853	133927853	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133928036	133928036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154169793	154169793	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4	113251	broad.mit.edu	37	12	50824402	50824402	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS2	23395	broad.mit.edu	37	3	45500217	45500217	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145499985	145499985	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145508725	145508725	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS5	91012	broad.mit.edu	37	12	50529760	50529760	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203743105	203743105	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5	167691	broad.mit.edu	37	6	80197277	80197277	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1C	353133	broad.mit.edu	37	1	152777761	152777761	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1E	353135	broad.mit.edu	37	1	152759971	152759971	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2B	26239	broad.mit.edu	37	1	152659626	152659626	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46721268	46721268	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136566685	136566685	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16590406	16590406	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18436751	18436751	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18467701	18467701	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	108985506	108985506	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LENG8	114823	broad.mit.edu	37	19	54968892	54968892	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEO1	123169	broad.mit.edu	37	15	52246795	52246795	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPREL2	10536	broad.mit.edu	37	12	6948076	6948076	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66036121	66036121	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66043467	66043467	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX1	3975	broad.mit.edu	37	17	35297818	35297818	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48646673	48646673	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108863343	108863343	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55112134	55112134	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55146831	55146831	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54784267	54784268	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175709	55175709	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55177841	55177841	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMD1	8994	broad.mit.edu	37	3	45637310	45637310	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMD1	8994	broad.mit.edu	37	3	45707201	45707201	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMK1	3984	broad.mit.edu	37	7	73535415	73535415	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMK2	3985	broad.mit.edu	37	22	31664206	31664206	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN7C	55327	broad.mit.edu	37	11	27523283	27523283	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO1	84894	broad.mit.edu	37	15	77907381	77907381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73569076	73569076	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73571096	73571096	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1L	79748	broad.mit.edu	37	15	75116016	75116016	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1L	55716	broad.mit.edu	37	12	49491726	49491726	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1L	55716	broad.mit.edu	37	12	49504188	49504188	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156518501	156518501	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO2	4005	broad.mit.edu	37	11	33881003	33881003	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76375185	76375185	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD2	442721	broad.mit.edu	37	7	123302840	123302841	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1A	4009	broad.mit.edu	37	1	165322268	165322268	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100101266	100101266	broad.mit.edu	37	19	24345551	24345551	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100101938	100101938	broad.mit.edu	37	13	19879315	19879315	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100124692	100124692	broad.mit.edu	37	7	141896492	141896492	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100128977	100128977	broad.mit.edu	37	17	43922206	43922206	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100302640	100302640	broad.mit.edu	37	3	106823841	106823841	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100302640	100302640	broad.mit.edu	37	3	106824349	106824349	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC134466	134466	broad.mit.edu	37	5	150310650	150310650	+	3'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC255025	255025	broad.mit.edu	37	3	94656807	94656807	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285401	285401	broad.mit.edu	37	3	63082354	63082354	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27535377	27535377	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27538024	27538024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132202035	132202035	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643387	643387	broad.mit.edu	37	2	239141363	239141363	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15322223	15322223	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21937916	21937916	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC731789	731789	broad.mit.edu	37	10	26939489	26939489	+	RNA	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC81691	81691	broad.mit.edu	37	16	20833145	20833145	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC91316	91316	broad.mit.edu	37	22	23981111	23981111	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22556191	22556191	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23213916	23213916	+	RNA	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23223370	23223371	+	RNA	INS	-	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23264906	23264906	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118151596	118151596	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160963586	160963586	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160968737	160968737	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160968856	160968856	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161032522	161032522	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161087475	161087475	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1481216	1481216	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT2	54947	broad.mit.edu	37	16	55562356	55562356	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPGAT1	9926	broad.mit.edu	37	1	211956548	211956548	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	81969161	81969161	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82436173	82436173	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82456310	82456310	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62812745	62812745	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62845250	62845250	+	Intron	SNP	G	T	T	rs2271337	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99772270	99772270	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155665439	155665439	+	5'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151344440	151344440	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197544201	197544220	+	Intron	DEL	ATGTGTGTGTGTGTGTCTGT	-	-	rs1273552	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRDD	55367	broad.mit.edu	37	11	799386	799386	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85985202	85985202	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105510277	105510277	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141032110	141032110	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141116547	141116547	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141267672	141267672	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141283457	141283457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141294120	141294120	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141299535	141299535	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141440997	141440997	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141459647	141459648	+	Intron	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141473549	141473549	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141597618	141597618	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141660594	141660594	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141812791	141812791	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57559898	57559898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57571101	57571101	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170026392	170026393	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170042197	170042197	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170055470	170055470	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170081744	170081744	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46907542	46907542	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46921855	46921855	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC28	123355	broad.mit.edu	37	15	99798493	99798493	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC3B	116135	broad.mit.edu	37	3	26751994	26751994	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC50	123872	broad.mit.edu	37	16	84189346	84189346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52860889	52860889	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861975	52861975	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52883214	52883214	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133644985	133644985	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70460342	70460342	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70502017	70502017	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238688153	238688153	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40693140	40693140	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204587229	204587229	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204588730	204588730	+	Frame_Shift_Del	DEL	G	-	-	rs148739326		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN3	54674	broad.mit.edu	37	7	110764016	110764016	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77746569	77746569	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTA4H	4048	broad.mit.edu	37	12	96415878	96415878	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6G6F	259215	broad.mit.edu	37	6	31675821	31675821	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160706774	160706774	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYN	4067	broad.mit.edu	37	8	56866543	56866543	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6B	130576	broad.mit.edu	37	2	150064991	150064991	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL6	57151	broad.mit.edu	37	17	34263782	34263782	+	Silent	SNP	G	A	A	rs148658809		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL6	57151	broad.mit.edu	37	17	34266291	34266291	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39888557	39888557	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2257492	2257492	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADCAM1	8174	broad.mit.edu	37	19	501696	501719	+	In_Frame_Del	DEL	CTCCCGACACCACCTCCCCGGAGT	-	-	rs72970252	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA5	4104	broad.mit.edu	37	X	151284099	151284099	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB6	158809	broad.mit.edu	37	X	26213127	26213127	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995493	140995493	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140967167	140967167	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEE2	139599	broad.mit.edu	37	X	75003725	75003725	+	Missense_Mutation	SNP	C	T	T	rs150866998	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEH1	28986	broad.mit.edu	37	X	55479419	55479419	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEL2	54551	broad.mit.edu	37	15	23890547	23890547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	77756539	77756539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	79082779	79082779	+	5'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	118041958	118041958	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75648219	75648219	+	3'UTR	SNP	C	T	T	rs1128987		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242161977	242161977	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242162004	242162004	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K15	389840	broad.mit.edu	37	X	19389161	19389161	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161469311	161469311	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K5	4217	broad.mit.edu	37	6	136977654	136977654	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20062499	20062499	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7	9053	broad.mit.edu	37	6	136681826	136681826	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7	9053	broad.mit.edu	37	6	136686838	136686838	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK6	5597	broad.mit.edu	37	15	52351036	52351036	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP3	23162	broad.mit.edu	37	16	1812586	1812586	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179696296	179696296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK3	7867	broad.mit.edu	37	3	50685560	50685560	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164507009	164507009	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	165110215	165110215	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217124200	217124200	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10423937	10423937	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119729005	119729005	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119734902	119734902	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119740005	119740005	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119750717	119750717	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220791840	220791840	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57881835	57881835	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66406071	66406071	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATK	4145	broad.mit.edu	37	19	3778468	3778468	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	99019735	99019735	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAX	4149	broad.mit.edu	37	14	65544194	65544194	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBP	4155	broad.mit.edu	37	18	74778254	74778254	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC3R	4159	broad.mit.edu	37	20	54823861	54823861	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART3P	442229	broad.mit.edu	37	6	66498861	66498861	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCD1	401250	broad.mit.edu	37	6	31495959	31495959	+	5'Flank	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCC	4163	broad.mit.edu	37	5	112478886	112478886	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138679031	138679031	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127336223	127336223	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM5	4174	broad.mit.edu	37	22	35808696	35808696	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136630466	136630466	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP1	79772	broad.mit.edu	37	5	94248658	94248658	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37620025	37620025	+	Silent	SNP	G	A	A	rs2273108		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1B	130752	broad.mit.edu	37	2	207621882	207621882	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90442244	90442244	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECP2	4204	broad.mit.edu	37	X	153297886	153297886	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150908500	150908500	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116428865	116428865	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED23	9439	broad.mit.edu	37	6	131917827	131917827	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED31	51003	broad.mit.edu	37	17	6554904	6554904	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2B	100271849	broad.mit.edu	37	19	19258352	19258352	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2D	4209	broad.mit.edu	37	1	156444857	156444857	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126674906	126674906	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF6	1953	broad.mit.edu	37	1	3518973	3518973	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS1	4211	broad.mit.edu	37	2	66670112	66670112	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX2	4223	broad.mit.edu	37	7	15725505	15725505	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46806711	46806711	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767462	88767462	+	Missense_Mutation	SNP	G	T	T	rs138152179		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT5D1	196074	broad.mit.edu	37	11	28135249	28135249	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3C	51320	broad.mit.edu	37	18	48702765	48702765	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP5	8076	broad.mit.edu	37	12	8804350	8804350	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFN1	55669	broad.mit.edu	37	3	179104473	179104473	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158524936	158524936	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158526893	158526893	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD9	84804	broad.mit.edu	37	2	103353315	103353315	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141756746	141756746	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT1	4245	broad.mit.edu	37	5	180219359	180219359	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135119873	135119873	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC26647	219557	broad.mit.edu	37	7	88424345	88424345	+	5'UTR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC27382	149047	broad.mit.edu	37	1	78782785	78782785	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC72080	389538	broad.mit.edu	37	7	97535451	97535451	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST3	4259	broad.mit.edu	37	1	165620223	165620223	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALCL	84953	broad.mit.edu	37	11	12341401	12341401	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24380111	24380112	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1285-2	100302268	broad.mit.edu	37	2	70481072	70481072	+	5'Flank	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR890	100126303	broad.mit.edu	37	X	145075951	145075951	+	5'Flank	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129901357	129901357	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKL1	57591	broad.mit.edu	37	22	40827566	40827566	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151902375	151902375	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	152012126	152012126	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLPH	79083	broad.mit.edu	37	2	238419911	238419911	+	Intron	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2535505	2535505	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP26	56547	broad.mit.edu	37	11	5013214	5013214	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55525859	55525859	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55530859	55530859	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44642321	44642321	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90844382	90844382	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90856977	90856977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90857618	90857618	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90874276	90874276	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT2	80168	broad.mit.edu	37	11	75431352	75431352	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOG	4340	broad.mit.edu	37	6	29633942	29633943	+	Missense_Mutation	DNP	GG	TT	TT	rs143168440		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOG	4340	broad.mit.edu	37	6	29637972	29637972	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOG	4340	broad.mit.edu	37	6	29638039	29638039	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON1B	22879	broad.mit.edu	37	16	77228148	77228148	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC3	23515	broad.mit.edu	37	21	37742247	37742247	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13109921	13109921	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPL	4352	broad.mit.edu	37	1	43803815	43803815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56357346	56357346	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRAP2	112609	broad.mit.edu	37	6	84799172	84799172	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60754627	60754627	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL14	64928	broad.mit.edu	37	6	44081782	44081782	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS35	60488	broad.mit.edu	37	12	27876883	27876883	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS5	64969	broad.mit.edu	37	2	95774150	95774150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A10	341116	broad.mit.edu	37	11	60558592	60558592	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSGN1	343930	broad.mit.edu	37	2	17998056	17998056	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSR1	4481	broad.mit.edu	37	8	15967521	15967521	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRB2	22921	broad.mit.edu	37	10	23399200	23399200	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1	4485	broad.mit.edu	37	3	49725033	49725033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151265679	151265679	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63445161	63445161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30602883	30602883	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30645129	30645129	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30658258	30658258	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTTP	4547	broad.mit.edu	37	4	100503252	100503253	+	Intron	DNP	GG	CT	CT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29598795	29598795	+	5'UTR	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	30062173	30062173	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTX2	10651	broad.mit.edu	37	2	177193185	177193185	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9018138	9018138	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9018239	9018239	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9056877	9056877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9065903	9065903	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100675863	100675863	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1085878	1085878	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1099680	1099680	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1101705	1101705	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71346841	71346841	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71347516	71347516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1	84939	broad.mit.edu	37	19	1373031	1373031	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113562997	113562997	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3228223	3228223	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3238801	3238801	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBBP1A	10514	broad.mit.edu	37	17	4443107	4443107	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL1	4603	broad.mit.edu	37	8	67479100	67479100	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42302339	42302339	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47367733	47367733	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77625305	77625305	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77632489	77632489	+	Missense_Mutation	SNP	C	A	A	rs147594639		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77669711	77669711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYF6	4618	broad.mit.edu	37	12	81102490	81102490	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15892574	15892574	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10209868	10209868	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10409387	10409387	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10411224	10411224	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10547773	10547773	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10359111	10359112	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23862067	23862067	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33568209	33568209	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36696851	36696851	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL10	93408	broad.mit.edu	37	7	101256815	101256815	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL1	4632	broad.mit.edu	37	2	211159216	211159216	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL7	58498	broad.mit.edu	37	7	44179508	44179508	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2749382	2749382	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123452994	123452994	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123456333	123456333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16761732	16761732	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109699140	109699140	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27419580	27419580	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26400910	26400910	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57430240	57430240	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57431662	57431662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192194697	192194697	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1E	4643	broad.mit.edu	37	15	59494607	59494607	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45010694	45010694	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76869483	76869483	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76900538	76900538	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128354000	128354000	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128387322	128387322	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72186037	72186037	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171621555	171621555	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95088795	95088795	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2072039	2072039	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24417265	24417265	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926489	1926489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926757	1926757	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30260040	30260040	+	5'Flank	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA11	84779	broad.mit.edu	37	4	80246689	80246689	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAAA	27163	broad.mit.edu	37	4	76857250	76857250	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89882210	89882210	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89907012	89907012	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NACA	4666	broad.mit.edu	37	12	57106635	57106635	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101712383	101712383	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101717915	101717915	+	Splice_Site	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101717919	101717919	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101756829	101756829	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101763040	101763040	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101944674	101944674	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102029341	102029341	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92927735	92927735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPG	8774	broad.mit.edu	37	18	10548349	10548349	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT2	10	broad.mit.edu	37	8	18257576	18257576	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78400265	78400265	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78510671	78510671	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78513204	78513204	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78542637	78542637	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36241515	36241515	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF6	653149	broad.mit.edu	37	1	108993173	108993173	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144815037	144815037	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	145075573	145075573	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBR1	4077	broad.mit.edu	37	17	41345412	41345412	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22370902	22370902	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG2	54892	broad.mit.edu	37	7	158482646	158482646	+	Splice_Site	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG	64151	broad.mit.edu	37	4	17826562	17826562	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH2	29781	broad.mit.edu	37	22	50960104	50960104	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183902768	183902768	+	Silent	SNP	G	A	A	rs138660373	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKIPSD	51517	broad.mit.edu	37	3	48716972	48716972	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33337364	33337364	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA7	135112	broad.mit.edu	37	6	126203632	126203632	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15989745	15989745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCS1	23413	broad.mit.edu	37	9	132984887	132984887	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDE1	54820	broad.mit.edu	37	16	15790760	15790760	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG4	65009	broad.mit.edu	37	16	58541757	58541757	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119026344	119026344	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA10	4705	broad.mit.edu	37	2	240951013	240951013	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA12	55967	broad.mit.edu	37	12	95397411	95397411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA8	4702	broad.mit.edu	37	9	124910370	124910370	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFAF4	29078	broad.mit.edu	37	6	97338933	97338933	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB6	4712	broad.mit.edu	37	9	32572861	32572861	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB9	4715	broad.mit.edu	37	8	125555397	125555397	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS1	4719	broad.mit.edu	37	2	207008741	207008742	+	Splice_Site	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS3	4722	broad.mit.edu	37	11	47605770	47605770	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21098859	21098859	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152524439	152524439	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL3	55247	broad.mit.edu	37	4	178272480	178272480	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27233852	27233852	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52787573	52787573	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO2	81831	broad.mit.edu	37	16	47163110	47163110	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEU2	4759	broad.mit.edu	37	2	233898903	233898903	+	Silent	SNP	G	T	T	rs2233387		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL3	93082	broad.mit.edu	37	2	97166207	97166207	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	22148284	22148284	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204951081	204951081	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77210885	77210885	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68248276	68248276	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKB2	4791	broad.mit.edu	37	10	104160161	104160161	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17744755	17744755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17745107	17745107	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124676272	124676272	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD2	85409	broad.mit.edu	37	5	1037896	1037896	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173997440	173997440	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173998184	173998184	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57099105	57099105	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7982364	7982364	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7982526	7982526	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56422991	56422991	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56443578	56443578	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7060938	7060938	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7064401	7064401	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP1	22861	broad.mit.edu	37	17	5424835	5424835	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588039	247588039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247597508	247597508	+	Missense_Mutation	SNP	G	C	C	rs141389711	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56369120	56369120	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56369305	56369305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56473435	56473435	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR1	10316	broad.mit.edu	37	2	232390050	232390050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14951535	14951535	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26087296	26087296	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150696468	150696468	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120478159	120478159	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX3	50508	broad.mit.edu	37	6	155761165	155761165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69334910	69334910	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101606699	101606699	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS4	266743	broad.mit.edu	37	11	66190662	66190662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108044227	108044227	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110881445	110881445	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	5967250	5967250	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179533830	179533830	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPNT	255743	broad.mit.edu	37	4	106888662	106888662	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPPB	4879	broad.mit.edu	37	1	11918461	11918461	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35801591	35801591	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY	4852	broad.mit.edu	37	7	24324910	24324910	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107822224	107822224	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107880434	107880434	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84733612	84733612	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG4	145957	broad.mit.edu	37	15	76254245	76254245	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRL	4901	broad.mit.edu	37	14	24551747	24551747	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33481480	33481480	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206617571	206617571	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206631690	206631690	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50149359	50149359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50847255	50847255	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79117522	79117522	+	5'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79117635	79117635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79270162	79270162	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18745191	18745191	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18764285	18764285	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC3	51559	broad.mit.edu	37	12	104186774	104186774	+	Intron	SNP	C	A	A	rs114191905	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132184660	132184660	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132204892	132204892	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9124293	9124293	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679078	88679078	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUAK1	9891	broad.mit.edu	37	12	106477483	106477483	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUAK1	9891	broad.mit.edu	37	12	106480519	106480519	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUBPL	80224	broad.mit.edu	37	14	32068652	32068652	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD3	23386	broad.mit.edu	37	7	44507863	44507863	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229588382	229588382	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP188	23511	broad.mit.edu	37	9	131744890	131744890	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154099789	154099789	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP62	23636	broad.mit.edu	37	19	50412420	50412420	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3781911	3781911	+	Intron	SNP	C	A	A	rs16929774	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25901257	25901257	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62572875	62572875	+	5'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101093962	101093962	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAF	220323	broad.mit.edu	37	11	120097704	120097704	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS3	4940	broad.mit.edu	37	12	113384680	113384680	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAT	4942	broad.mit.edu	37	10	126091575	126091575	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2A	29991	broad.mit.edu	37	9	138439723	138439723	+	Missense_Mutation	SNP	G	T	T	rs144739878		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228468497	228468497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228491721	228491721	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220418377	220418377	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCEL1	79629	broad.mit.edu	37	19	17339818	17339818	+	3'UTR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCIAD2	132299	broad.mit.edu	37	4	48894769	48894769	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167181955	167181955	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183713386	183713386	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183714264	183714264	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78413441	78413441	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78437147	78437147	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OFD1	8481	broad.mit.edu	37	X	13785314	13785314	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53625103	53625103	+	3'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161987227	161987227	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML3	56944	broad.mit.edu	37	1	114522082	114522082	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLR1	4973	broad.mit.edu	37	12	10321772	10321772	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67291000	67291000	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A4	283297	broad.mit.edu	37	11	6898191	6898191	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G4	390264	broad.mit.edu	37	11	123886909	123886909	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G4	390264	broad.mit.edu	37	11	123886968	123886968	+	Silent	SNP	C	A	A	rs116021926	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123901162	123901162	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J3	441911	broad.mit.edu	37	1	159283598	159283598	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Z1	128368	broad.mit.edu	37	1	158576967	158576967	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11G2	390439	broad.mit.edu	37	14	20666364	20666364	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29364690	29364690	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D3	81797	broad.mit.edu	37	6	29343071	29343071	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367473	107367473	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107360884	107360884	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247835749	247835749	+	Missense_Mutation	SNP	C	A	A	rs147056410	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247836100	247836101	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247836345	247836345	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845057	248845057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845196	248845197	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921038	247921038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1E2	8388	broad.mit.edu	37	17	3337147	3337147	+	5'Flank	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J2	26740	broad.mit.edu	37	9	125273139	125273139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1Q1	158131	broad.mit.edu	37	9	125377563	125377564	+	Missense_Mutation	DNP	GC	TT	TT	rs116701890	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57970994	57970994	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971380	57971380	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A25	392138	broad.mit.edu	37	7	143771324	143771324	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A5	393046	broad.mit.edu	37	7	143748015	143748015	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128725	248128725	+	Missense_Mutation	SNP	G	T	T	rs74153215	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AT4	341152	broad.mit.edu	37	11	74799863	74799863	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D3	120775	broad.mit.edu	37	11	6942258	6942258	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F2	135948	broad.mit.edu	37	7	143632310	143632310	+	5'Flank	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247751880	247751880	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J3	442186	broad.mit.edu	37	6	29079941	29079941	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166657	248166657	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166731	248166731	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224093	248224093	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224537	248224537	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112310	248112310	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343733	248343733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366486	248366486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248756307	248756307	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458331	248458331	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458840	248458840	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458923	248458923	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458995	248458995	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T1	26696	broad.mit.edu	37	1	248569885	248569885	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248524794	248524794	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248525336	248525336	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059920	248059920	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55136382	55136382	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55110916	55110916	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A47	403253	broad.mit.edu	37	11	48510574	48510574	+	Missense_Mutation	SNP	C	A	A	rs150039172		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C16	219428	broad.mit.edu	37	11	55339919	55339919	+	Missense_Mutation	SNP	G	T	T	rs144938325		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55433201	55433202	+	Missense_Mutation	DNP	TG	CT	CT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F15	390649	broad.mit.edu	37	15	102358680	102358680	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F6	390648	broad.mit.edu	37	15	102345915	102345915	+	5'Flank	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K1	79544	broad.mit.edu	37	14	20404275	20404275	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K2	390431	broad.mit.edu	37	14	20344996	20344996	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M1	441670	broad.mit.edu	37	14	20248994	20248994	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55405850	55405850	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55406188	55406188	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55406302	55406302	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216346	20216346	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4X1	390113	broad.mit.edu	37	11	48285915	48285915	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A7	119687	broad.mit.edu	37	11	4928835	4928835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G1	79324	broad.mit.edu	37	11	4945678	4945678	+	5'Flank	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51S1	119692	broad.mit.edu	37	11	4869790	4869790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E4	390081	broad.mit.edu	37	11	5906024	5906024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510987	4510987	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N5	390075	broad.mit.edu	37	11	5799384	5799384	+	Missense_Mutation	SNP	C	T	T	rs143269628		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A4	120793	broad.mit.edu	37	11	6023680	6023680	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AS1	219447	broad.mit.edu	37	11	55798241	55798241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207340	58207340	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D13	390142	broad.mit.edu	37	11	55541279	55541279	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563543	55563543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606961	55606961	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H15	403274	broad.mit.edu	37	3	97887789	97887789	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H6	79295	broad.mit.edu	37	3	97984066	97984066	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5J2	282775	broad.mit.edu	37	11	55944330	55944330	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5J2	282775	broad.mit.edu	37	11	55944912	55944912	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5P2	120065	broad.mit.edu	37	11	7818246	7818246	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5W2	390148	broad.mit.edu	37	11	55681905	55681905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6A2	8590	broad.mit.edu	37	11	6816982	6816982	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875377	247875377	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158669885	158669885	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6S1	341799	broad.mit.edu	37	14	21109500	21109500	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749798	142749798	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6X1	390260	broad.mit.edu	37	11	123625061	123625061	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6Y1	391112	broad.mit.edu	37	1	158517593	158517593	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E24	26648	broad.mit.edu	37	19	9362498	9362498	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E5P	219445	broad.mit.edu	37	11	55747211	55747211	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B12	219858	broad.mit.edu	37	11	124413356	124413356	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8G2	26492	broad.mit.edu	37	11	124095877	124095877	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55904794	55904794	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55926935	55926935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9I1	219954	broad.mit.edu	37	11	57886814	57886814	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL2	9885	broad.mit.edu	37	20	60848469	60848469	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24870410	24870410	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL7	114881	broad.mit.edu	37	17	45885789	45885789	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSGIN1	29948	broad.mit.edu	37	16	83992864	83992864	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSMR	9180	broad.mit.edu	37	5	38922040	38922040	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTC	58505	broad.mit.edu	37	4	109571951	109571951	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21690437	21690437	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21726422	21726422	+	Silent	SNP	C	A	A	rs151328702		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737753	21737753	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21747674	21747675	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26680812	26680812	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7A	161725	broad.mit.edu	37	15	31779707	31779707	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149916312	149916312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29617680	29617680	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29624839	29624839	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29629149	29629149	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29640733	29640733	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29648356	29648356	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVOL1	5017	broad.mit.edu	37	11	65554911	65554911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXR1	55074	broad.mit.edu	37	8	107710016	107710016	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX1	5023	broad.mit.edu	37	17	3806697	3806697	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17593246	17593246	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI6	353238	broad.mit.edu	37	1	17720679	17720679	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAH	5053	broad.mit.edu	37	12	103271254	103271254	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169432821	169432821	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM	5064	broad.mit.edu	37	19	734062	734062	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAM	5066	broad.mit.edu	37	5	102361025	102361025	+	Silent	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56711296	56711296	+	3'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176526098	176526099	+	Missense_Mutation	DNP	GG	TC	TC			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108576141	108576141	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25454954	25454954	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34690798	34690798	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD6B	84612	broad.mit.edu	37	20	49366767	49366767	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	161990329	161990329	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162474997	162474997	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162989902	162989902	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP15	165631	broad.mit.edu	37	3	122340333	122340333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP15	165631	broad.mit.edu	37	3	122353848	122353848	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226566929	226566929	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVB	29780	broad.mit.edu	37	22	44527328	44527328	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150840308	150840308	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102541090	102541090	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223096856	223096856	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX5	5079	broad.mit.edu	37	9	36966733	36966733	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX6	5080	broad.mit.edu	37	11	31812322	31812322	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX6	5080	broad.mit.edu	37	11	31822341	31822341	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	18961073	18961073	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52643680	52643680	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154919271	154919271	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP1	5093	broad.mit.edu	37	2	70315923	70315923	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47359930	47359930	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP4	57060	broad.mit.edu	37	3	51994299	51994299	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134071190	134071190	+	5'UTR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072236	134072236	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072870	134072870	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91134268	91134268	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91368705	91368705	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91369355	91369355	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55626410	55626410	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH20	64881	broad.mit.edu	37	13	61985498	61985498	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH20	64881	broad.mit.edu	37	13	61985943	61985943	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67801880	67801880	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA10	56139	broad.mit.edu	37	5	140235754	140235754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA10	56139	broad.mit.edu	37	5	140237564	140237564	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140242421	140242421	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140175321	140175321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140177024	140177024	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140182121	140182121	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA8	56140	broad.mit.edu	37	5	140222067	140222067	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140347671	140347671	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140590170	140590170	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB15	56121	broad.mit.edu	37	5	140627195	140627195	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140720200	140720200	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140737049	140737049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140753939	140753939	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB2	56103	broad.mit.edu	37	5	140740131	140740131	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF2	7703	broad.mit.edu	37	17	36895940	36895940	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82474642	82474642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82476482	82476482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82579983	82579983	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47754562	47754562	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47832711	47832711	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47851463	47851463	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL3	399909	broad.mit.edu	37	11	65402380	65402380	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71489744	71489744	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK1	5122	broad.mit.edu	37	5	95748019	95748019	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105162908	105162908	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6IP	10015	broad.mit.edu	37	3	33866569	33866569	+	Intron	SNP	A	T	T	rs58066707	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165801829	165801829	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178534306	178534306	+	Intron	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178592737	178592737	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54963069	54963070	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31792857	31792857	+	3'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31887551	31887551	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72308502	72308502	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20766631	20766631	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4C	5143	broad.mit.edu	37	19	18329183	18329184	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149264109	149264109	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76587071	76587071	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76627130	76627130	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55139722	55139722	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55140699	55140699	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55155037	55155037	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149504984	149504984	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA2	64714	broad.mit.edu	37	16	335744	335744	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA6	10130	broad.mit.edu	37	2	10929942	10929942	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20386220	20386220	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPR	55066	broad.mit.edu	37	16	70154618	70154618	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15126927	15126927	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15224349	15224349	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD11	51248	broad.mit.edu	37	X	69508377	69508377	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31847888	31847888	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31847890	31847890	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32089569	32089569	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119043130	119043130	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41957328	41957328	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216914082	216914082	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57328676	57328676	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57333091	57333091	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELO	53918	broad.mit.edu	37	5	52097598	52097598	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152629137	152629137	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179754551	179754551	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6268373	6268373	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKL	5211	broad.mit.edu	37	21	45745937	45745937	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAP1	80055	broad.mit.edu	37	2	197784946	197784946	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGCP	10404	broad.mit.edu	37	8	97847138	97847138	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK1	5230	broad.mit.edu	37	X	77372919	77372919	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2L1	283209	broad.mit.edu	37	11	74058429	74058429	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22237202	22237202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96416860	96416860	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60506077	60506077	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60570143	60570143	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60609095	60609095	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60639711	60639711	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71697944	71697944	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHRF1	57661	broad.mit.edu	37	11	607913	607913	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4K2A	55361	broad.mit.edu	37	10	99344715	99344715	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21157610	21157610	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIF1	80119	broad.mit.edu	37	15	65112219	65112219	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35091221	35091221	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35092199	35092199	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGR	5284	broad.mit.edu	37	1	207111097	207111097	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17172116	17172116	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39637788	39637788	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CG	5294	broad.mit.edu	37	7	106522623	106522623	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8814703	8814703	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8706526	8706526	+	3'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209209793	209209793	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57987870	57987870	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57994485	57994485	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71404112	71404112	+	Intron	SNP	G	T	T	rs12336421	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142836648	142836648	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIR	8544	broad.mit.edu	37	X	15408252	15408252	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX1	5307	broad.mit.edu	37	5	134366998	134366998	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22210598	22210598	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47897495	47897495	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47942094	47942094	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2168792	2168792	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110394763	110394763	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51497480	51497480	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51915060	51915060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125298883	125298883	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP1	5317	broad.mit.edu	37	1	201289368	201289368	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP1	5317	broad.mit.edu	37	1	201297978	201297978	+	3'UTR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	33030954	33030954	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2E	30814	broad.mit.edu	37	1	20246811	20246811	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2F	64600	broad.mit.edu	37	1	20474573	20474573	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G3	50487	broad.mit.edu	37	22	31533822	31533822	+	Missense_Mutation	SNP	G	C	C	rs149172730		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42038086	42038087	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28754964	28754964	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28761238	28761238	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28805085	28805085	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113822701	113822701	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96025811	96025811	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96058058	96058058	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96081748	96081748	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81916772	81916772	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH2	9651	broad.mit.edu	37	1	2419254	2419254	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198950911	198950912	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD2	5338	broad.mit.edu	37	17	4722217	4722217	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD4	122618	broad.mit.edu	37	14	105396256	105396256	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242511374	242511374	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242540453	242540453	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145003952	145003952	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145008696	145008696	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145008751	145008751	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145012823	145012823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145028017	145028017	+	5'Flank	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA8	84725	broad.mit.edu	37	7	30092445	30092445	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131949244	131949244	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG3	26030	broad.mit.edu	37	14	65209851	65209851	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43953436	43953436	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHM1	9842	broad.mit.edu	37	17	43535874	43535874	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161123264	161123264	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161160298	161160298	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC2	84898	broad.mit.edu	37	10	20432250	20432250	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126735383	126735383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208200698	208200698	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208212308	208212308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208390214	208390214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153696945	153696945	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131849037	131849037	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131866287	131866288	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131913153	131913153	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94618082	94618082	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94654449	94654449	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMM1	5372	broad.mit.edu	37	22	41982110	41982110	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS1	5378	broad.mit.edu	37	2	190660675	190660675	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2CL	441194	broad.mit.edu	37	7	6758086	6758086	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160234489	160234489	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118364828	118364828	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118196348	118196348	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA5	150379	broad.mit.edu	37	22	44285403	44285403	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133241100	133241100	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLK	51426	broad.mit.edu	37	5	74848200	74848200	+	Intron	SNP	C	A	A	rs5744605		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLN	353497	broad.mit.edu	37	4	2195097	2195097	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2F	5435	broad.mit.edu	37	22	38355308	38355308	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106763069	106763069	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103526	53103526	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134394319	134394319	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMZP3	22932	broad.mit.edu	37	7	76254966	76254966	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP4	10775	broad.mit.edu	37	19	30099608	30099608	+	Missense_Mutation	SNP	G	T	T	rs144806266		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124467351	124467351	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124532324	124532324	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	132021400	132021400	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU1F1	5449	broad.mit.edu	37	3	87322487	87322487	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23886328	23886328	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18796964	18796964	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF2	5470	broad.mit.edu	37	4	76787428	76787428	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF2	5470	broad.mit.edu	37	4	76793254	76793254	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81741174	81741174	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81747008	81747008	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27745621	27745621	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4933740	4933740	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202394513	202394513	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15A	23645	broad.mit.edu	37	19	49376908	49376908	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3F	89801	broad.mit.edu	37	X	49143232	49143232	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146257616	146257616	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3R1	5534	broad.mit.edu	37	2	68415748	68415748	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3R2	5535	broad.mit.edu	37	9	104357038	104357038	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103899654	103899654	+	Missense_Mutation	SNP	G	T	T	rs148379078		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPTC7	160760	broad.mit.edu	37	12	110976020	110976020	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF12	390999	broad.mit.edu	37	1	12837328	12837328	+	Silent	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF4	400735	broad.mit.edu	37	1	12941888	12941888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAME	23532	broad.mit.edu	37	22	22890546	22890546	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAME	23532	broad.mit.edu	37	22	22892504	22892504	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAME	23532	broad.mit.edu	37	22	22899246	22899246	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47268094	47268094	+	Missense_Mutation	SNP	C	A	A	rs138988694		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186266034	186266034	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIC285	85441	broad.mit.edu	37	20	62192885	62192885	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE1	144165	broad.mit.edu	37	12	42860072	42860072	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57512670	57512670	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAA1	5562	broad.mit.edu	37	5	40775031	40775031	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG3	53632	broad.mit.edu	37	2	219695107	219695108	+	Intron	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR1B	5575	broad.mit.edu	37	7	591043	591043	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	23999801	23999802	+	Intron	DNP	CC	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24196717	24196717	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48711843	48711843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82090872	82090872	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT2	3275	broad.mit.edu	37	21	48084334	48084334	+	3'UTR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT3	10196	broad.mit.edu	37	11	20429516	20429516	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROK1	84432	broad.mit.edu	37	1	110996662	110996662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROKR2	128674	broad.mit.edu	37	20	5294854	5294854	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROP1	5626	broad.mit.edu	37	5	177421183	177421183	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93615551	93615551	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93617218	93617218	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROX2	283571	broad.mit.edu	37	14	75330424	75330424	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROZ	8858	broad.mit.edu	37	13	113825800	113825800	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23A	729627	broad.mit.edu	37	3	138724343	138724343	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23C	389152	broad.mit.edu	37	3	138762812	138762812	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRT1	80863	broad.mit.edu	37	6	32118113	32118113	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142459775	142459775	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS36	146547	broad.mit.edu	37	16	31157042	31157042	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS36	146547	broad.mit.edu	37	16	31157193	31157193	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228004076	228004076	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS45	377047	broad.mit.edu	37	3	46784392	46784392	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS55	203074	broad.mit.edu	37	8	10387228	10387228	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTG	283659	broad.mit.edu	37	15	56032678	56032678	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43343331	43343331	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43680093	43680093	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43575651	43575651	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43259086	43259086	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43268410	43268410	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43349343	43349343	+	5'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43757746	43757746	+	3'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43773392	43773392	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH2	85481	broad.mit.edu	37	8	87076623	87076623	+	Silent	SNP	G	T	T	rs139789006	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA4	5685	broad.mit.edu	37	15	78836662	78836662	+	Intron	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB11	122706	broad.mit.edu	37	14	23512073	23512073	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB8	5696	broad.mit.edu	37	6	32811806	32811807	+	5'UTR	DNP	CG	GT	GT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC4	5704	broad.mit.edu	37	19	40477037	40477037	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD11	5717	broad.mit.edu	37	17	30806346	30806346	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD4	5710	broad.mit.edu	37	1	151239025	151239025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD6	9861	broad.mit.edu	37	3	64004980	64004980	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54125016	54125016	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMG3	84262	broad.mit.edu	37	7	1608771	1608771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH1	5727	broad.mit.edu	37	9	98220410	98220410	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGDS	5730	broad.mit.edu	37	9	139873716	139873716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117527322	117527322	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS1	5742	broad.mit.edu	37	9	125140094	125140094	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209357890	209357890	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK6	5753	broad.mit.edu	37	20	62162090	62162090	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK6	5753	broad.mit.edu	37	20	62164113	62164113	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTMA	5757	broad.mit.edu	37	2	232577908	232577908	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87679886	87679886	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8376609	8376609	+	Nonsense_Mutation	SNP	T	A	A	rs144200611		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8460523	8460523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8524867	8524867	+	Intron	SNP	G	T	T	rs75123693	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8524977	8524977	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRE	5791	broad.mit.edu	37	10	129854559	129854559	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55697269	55697269	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55708390	55708390	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157931306	157931306	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71065710	71065711	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40757458	40757458	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40790177	40790178	+	Missense_Mutation	DNP	CA	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121650958	121650958	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121651806	121651806	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121676791	121676791	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121693935	121693935	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTRH1	138428	broad.mit.edu	37	9	130478320	130478320	+	5'Flank	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTRH1	138428	broad.mit.edu	37	9	130478322	130478322	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL1	5818	broad.mit.edu	37	11	119549087	119549087	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52321213	52321213	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYCRL	65263	broad.mit.edu	37	8	144687783	144687783	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPCT	25797	broad.mit.edu	37	2	37599510	37599510	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP3	9727	broad.mit.edu	37	16	511444	511444	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB43	339122	broad.mit.edu	37	3	128813856	128813857	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174363350	174363350	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGEF1	27342	broad.mit.edu	37	7	66262555	66262556	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76251968	76251968	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76254898	76254898	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L3	5892	broad.mit.edu	37	17	33428230	33428230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4839071	4839071	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4874578	4874578	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG2	5897	broad.mit.edu	37	11	36614951	36614951	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37163979	37163979	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS2	55103	broad.mit.edu	37	1	178846684	178846684	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85441701	85441701	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85799896	85799896	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109352661	109352661	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160251586	160251586	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF3	10411	broad.mit.edu	37	12	48134466	48134466	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173916400	173916400	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	131080176	131080176	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS	5917	broad.mit.edu	37	5	167921539	167921539	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA1	5921	broad.mit.edu	37	5	86672977	86672977	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114766479	114766479	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114782839	114782839	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114784225	114784225	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114789879	114789879	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178414538	178414538	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASEF	158158	broad.mit.edu	37	9	85622420	85622420	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1C	255426	broad.mit.edu	37	5	179546204	179546204	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP2	10235	broad.mit.edu	37	11	64503151	64503151	+	Intron	SNP	G	T	T	rs112436682		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASL11A	387496	broad.mit.edu	37	13	27847369	27847369	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASL12	51285	broad.mit.edu	37	15	65351719	65351719	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF6	166824	broad.mit.edu	37	4	74447533	74447533	+	Splice_Site	SNP	C	A	A	rs147074403		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155129839	155129839	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJL	11317	broad.mit.edu	37	20	43941003	43941003	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPMS2	348093	broad.mit.edu	37	15	65041694	65041694	+	Splice_Site	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125617621	125617621	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49086998	49086998	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCC2	55920	broad.mit.edu	37	1	17736359	17736359	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDX	5962	broad.mit.edu	37	11	110128497	110128497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79363232	79363232	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79364468	79364468	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELL2	285613	broad.mit.edu	37	5	141018055	141018055	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103138649	103138649	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103162509	103162509	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103252227	103252227	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103368501	103368501	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REM1	28954	broad.mit.edu	37	20	30060867	30060867	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REM1	28954	broad.mit.edu	37	20	30060898	30060898	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REM1	28954	broad.mit.edu	37	20	30065698	30065698	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REM1	28954	broad.mit.edu	37	20	30070104	30070104	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REN	5972	broad.mit.edu	37	1	204136808	204136808	+	5'Flank	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8425871	8425871	+	Splice_Site	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV1	51455	broad.mit.edu	37	2	100052452	100052452	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFT1	91869	broad.mit.edu	37	3	53137994	53137994	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	176118075	176118075	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD3	55159	broad.mit.edu	37	16	74662537	74662537	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107113822	107113822	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL4	266747	broad.mit.edu	37	22	24036526	24036526	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGR	5995	broad.mit.edu	37	10	86007432	86007432	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101075090	101075090	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101075759	101075759	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101083735	101083735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116299126	116299126	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163122409	163122409	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240933205	240933205	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240969465	240969465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182635924	182635924	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS9	8787	broad.mit.edu	37	17	63156638	63156638	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD2	57414	broad.mit.edu	37	7	75517556	75517556	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOF	54509	broad.mit.edu	37	12	122217461	122217461	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC3	79608	broad.mit.edu	37	11	8132302	8132302	+	Silent	SNP	G	A	A	rs17852022	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICH2	9912	broad.mit.edu	37	17	12846933	12846933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152311424	152311424	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130892065	130892065	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104513164	104513165	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104672414	104672414	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104928902	104928902	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43386739	43386739	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43386832	43386832	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPK1	8737	broad.mit.edu	37	6	3085386	3085386	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87085159	87085159	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87400064	87400064	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87414230	87414230	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	88013512	88013512	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE10	338879	broad.mit.edu	37	14	20979139	20979139	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121004691	121004691	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49738207	49738207	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF133	168433	broad.mit.edu	37	7	122338605	122338605	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF150	57484	broad.mit.edu	37	4	141868777	141868777	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30303583	30303583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30318348	30318348	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25348978	25348978	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25419089	25419089	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101299593	101299593	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78328162	78328162	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78363553	78363553	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216L	441191	broad.mit.edu	37	7	5015877	5015877	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF2	6045	broad.mit.edu	37	1	185069342	185069342	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78683300	78683300	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77645928	77645928	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94487066	94487066	+	Silent	SNP	C	A	A	rs41277837	byFrequency;by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117704587	117704587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10465408	10465408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10465814	10465814	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10473840	10473840	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10480766	10480766	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68896885	68896885	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL18A	6142	broad.mit.edu	37	19	17973501	17973501	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL23AP82	284942	broad.mit.edu	37	22	51193314	51193314	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL27A	6157	broad.mit.edu	37	11	8704488	8704488	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS8	6202	broad.mit.edu	37	1	45241098	45241098	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7247517	7247517	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99133323	99133323	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1B	23076	broad.mit.edu	37	21	45094467	45094468	+	Intron	INS	-	T	T	rs66506749		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1L	222194	broad.mit.edu	37	7	77402527	77402527	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6006407	6006407	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6006566	6006566	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6836427	6836427	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH9	221421	broad.mit.edu	37	6	43624471	43624471	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO2	340419	broad.mit.edu	37	8	109001230	109001230	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC1	51319	broad.mit.edu	37	3	157993769	157993769	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC2	65117	broad.mit.edu	37	12	123011385	123011385	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY1	80230	broad.mit.edu	37	5	179003935	179003935	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93026760	93026760	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159566095	159566095	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32339338	32339338	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32352591	32352591	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32360555	32360555	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP3	51289	broad.mit.edu	37	5	33937208	33937208	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRA	6256	broad.mit.edu	37	9	137313435	137313435	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRB	6257	broad.mit.edu	37	6	33162717	33162717	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165380317	165380317	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165414138	165414138	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237620100	237620100	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237774140	237774140	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237798224	237798224	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237802371	237802371	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237906912	237906912	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33941313	33941313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34105630	34105630	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A8	6279	broad.mit.edu	37	1	153362552	153362552	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45781032	45781032	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23915735	23915735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134983643	134983643	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134991278	134991278	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL3	27164	broad.mit.edu	37	18	76753279	76753279	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL3	27164	broad.mit.edu	37	18	76757283	76757283	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200173681	200173681	+	Splice_Site	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123815810	123815810	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP2	10066	broad.mit.edu	37	15	75146479	75146479	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP3	10067	broad.mit.edu	37	1	155228631	155228631	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	52011538	52011538	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38781225	38781225	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166226697	166226697	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2B	6327	broad.mit.edu	37	11	118037853	118037853	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62025295	62025295	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38627390	38627390	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52139889	52139889	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52168053	52168053	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167168062	167168062	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNM1	79005	broad.mit.edu	37	1	151139074	151139074	+	Intron	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1G	6340	broad.mit.edu	37	16	23197833	23197833	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL2	55681	broad.mit.edu	37	12	100660957	100660957	+	5'Flank	SNP	T	G	G	rs112573754		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG1	9147	broad.mit.edu	37	14	50319518	50319518	+	5'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243456367	243456367	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243471206	243471206	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHD	6392	broad.mit.edu	37	11	111957821	111957821	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4026893	4026893	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4116809	4116810	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71335117	71335117	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71348585	71348585	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR9C7	121214	broad.mit.edu	37	12	57317743	57317743	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30857304	30857304	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2	79048	broad.mit.edu	37	9	91943595	91943595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83689790	83689790	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92006263	92006264	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9337872	9337872	+	Silent	SNP	C	A	A	rs111523371	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122645184	122645184	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115813644	115813644	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48056062	48056062	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48060965	48060965	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP1	29843	broad.mit.edu	37	12	48440265	48440265	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT3	55964	broad.mit.edu	37	22	42383628	42383628	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT3	55964	broad.mit.edu	37	22	42393004	42393004	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT7	989	broad.mit.edu	37	7	35841910	35841910	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC5	256987	broad.mit.edu	37	5	79454738	79454738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94915071	94915071	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94772489	94772489	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61223253	61223253	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61228253	61228253	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61234147	61234147	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61307106	61307106	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB6	5269	broad.mit.edu	37	6	2953084	2953084	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61463708	61463708	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61471509	61471509	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINC1	462	broad.mit.edu	37	1	173883690	173883690	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE2	5270	broad.mit.edu	37	2	224842166	224842166	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINI1	5274	broad.mit.edu	37	3	167540929	167540929	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42643085	42643085	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29884746	29884746	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26688679	26688679	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3A3	10946	broad.mit.edu	37	1	38446452	38446452	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70564530	70564530	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19142077	19142077	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFT2D1	113402	broad.mit.edu	37	6	166733691	166733691	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120920407	120920407	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCZ	137868	broad.mit.edu	37	8	13959863	13959863	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67126301	67126301	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67205272	67205272	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGOL2	151246	broad.mit.edu	37	2	201448175	201448175	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPP2	130367	broad.mit.edu	37	2	223317265	223317265	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTA	6449	broad.mit.edu	37	19	2759331	2759331	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTB	54557	broad.mit.edu	37	5	64976515	64976515	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130511788	130511789	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4A	63898	broad.mit.edu	37	8	19192395	19192395	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D5	400745	broad.mit.edu	37	1	21052590	21052590	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235950023	235950023	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84286744	84286744	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GLB1	51100	broad.mit.edu	37	1	87208780	87208780	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF3	344558	broad.mit.edu	37	2	109964320	109964320	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148406410	148406410	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHFM1	7979	broad.mit.edu	37	7	96324041	96324041	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHH	6469	broad.mit.edu	37	7	155596253	155596253	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	601698	601698	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51960689	51960689	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100911441	100911441	+	5'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM2	6493	broad.mit.edu	37	21	38095501	38095501	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232596806	232596806	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38600700	38600700	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPD	128646	broad.mit.edu	37	20	1517713	1517713	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT2	22933	broad.mit.edu	37	19	39371598	39371598	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164730802	164730802	+	Missense_Mutation	SNP	A	G	G	rs141495440		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164739041	164739041	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164792404	164792404	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160580639	160580639	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160594108	160594108	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160719714	160719714	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103703537	103703537	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A6	345274	broad.mit.edu	37	4	87770121	87770121	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A2	4891	broad.mit.edu	37	12	51385987	51385987	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A2	4891	broad.mit.edu	37	12	51390650	51390650	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127522368	127522368	+	3'UTR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56938513	56938513	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44675157	44675157	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A8	84561	broad.mit.edu	37	3	124829095	124829095	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135390716	135390716	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43247780	43247780	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43249357	43249357	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A6	9120	broad.mit.edu	37	17	66267479	66267479	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A9	220963	broad.mit.edu	37	10	61432492	61432492	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A1	6568	broad.mit.edu	37	6	25819932	25819932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25777118	25777118	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22397614	22397614	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A3	6572	broad.mit.edu	37	10	50818978	50818978	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15075228	15075228	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A7	6512	broad.mit.edu	37	1	53556224	53556224	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A2	6582	broad.mit.edu	37	6	160670243	160670243	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43266099	43266099	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19516285	19516285	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92909198	92909198	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A6	80024	broad.mit.edu	37	12	113758051	113758051	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95799303	95799303	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A18	83733	broad.mit.edu	37	22	18062751	18062751	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107431449	107431449	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A6	28965	broad.mit.edu	37	5	128302064	128302064	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A2	6514	broad.mit.edu	37	3	170716031	170716031	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9836765	9836765	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9987248	9987248	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A2	7780	broad.mit.edu	37	1	26370836	26370836	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A5	64924	broad.mit.edu	37	5	68399055	68399055	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35C2	51006	broad.mit.edu	37	20	44983640	44983640	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118228986	118228986	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A10	124565	broad.mit.edu	37	17	79244680	79244680	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A6	145389	broad.mit.edu	37	14	61447792	61447792	+	5'Flank	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84063088	84063088	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18250693	18250693	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18276596	18276597	+	Intron	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44527217	44527217	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A4	80736	broad.mit.edu	37	6	31833995	31833995	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162757507	162757507	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162761161	162761161	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24888676	24888676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A5	6528	broad.mit.edu	37	19	18004489	18004489	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108608567	108608567	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108618378	108618378	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A8	160728	broad.mit.edu	37	12	101555862	101555862	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A13	6540	broad.mit.edu	37	12	333247	333247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85285975	85285975	+	5'UTR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1225792	1225792	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1242871	1242871	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20639475	20639475	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20673895	20673896	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170198101	170198101	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A1	6541	broad.mit.edu	37	13	30110070	30110070	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135112295	135112295	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135112301	135112301	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21391984	21391984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74842614	74842614	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70585465	70585465	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98820417	98820417	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20493587	20493587	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20552452	20552452	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20618454	20618454	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168134924	168134924	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168150089	168150089	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168199770	168199770	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168201430	168201430	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84453896	84453896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142717696	142717696	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142718102	142718102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMO1	10650	broad.mit.edu	37	18	12427200	12427202	+	Intron	DEL	TTC	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD2	4087	broad.mit.edu	37	18	45368312	45368312	+	Silent	SNP	C	A	A	rs148531026		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95162122	95162122	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47721866	47721866	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45768189	45768189	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106889740	106889740	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70460998	70460998	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88409926	88409926	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD3	64754	broad.mit.edu	37	1	246078725	246078725	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD3	64754	broad.mit.edu	37	1	246672462	246672462	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC1	6617	broad.mit.edu	37	14	62233743	62233743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCA	6622	broad.mit.edu	37	4	90743477	90743477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-11	767589	broad.mit.edu	37	14	101434440	101434440	+	5'Flank	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-4	767580	broad.mit.edu	37	14	101419737	101419737	+	5'Flank	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25436825	25436825	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25438363	25438363	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25442523	25442523	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25460509	25460509	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-26	100033802	broad.mit.edu	37	15	25477770	25477770	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-13	100033425	broad.mit.edu	37	15	25324099	25324099	+	5'Flank	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25307561	25307561	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25331660	25331660	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX32	254122	broad.mit.edu	37	11	65618895	65618895	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOHLH2	54937	broad.mit.edu	37	13	36748843	36748843	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SON	6651	broad.mit.edu	37	21	34922655	34922655	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS1	10580	broad.mit.edu	37	10	97170585	97170585	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108447959	108447959	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802769	106802769	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOSTDC1	25928	broad.mit.edu	37	7	16502317	16502317	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX21	11166	broad.mit.edu	37	13	95364147	95364147	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16117639	16117640	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16133313	16133313	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16340125	16340125	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140L	93349	broad.mit.edu	37	2	231193546	231193546	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231112622	231112622	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142605327	142605327	+	5'Flank	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172631397	172631397	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA19	219938	broad.mit.edu	37	11	133715240	133715240	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA6	54558	broad.mit.edu	37	1	48901970	48901970	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATC1	375686	broad.mit.edu	37	8	145095278	145095278	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE4	388333	broad.mit.edu	37	17	8659652	8659652	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35774235	35774235	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35807451	35807451	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220352934	220352934	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG20	23111	broad.mit.edu	37	13	36888510	36888510	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228883020	228883020	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228973593	228973593	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINLW1	57119	broad.mit.edu	37	20	44171509	44171509	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPN	6693	broad.mit.edu	37	16	29675184	29675184	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPO11	23626	broad.mit.edu	37	20	55910525	55910525	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCD1	90853	broad.mit.edu	37	1	32267221	32267221	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON1	10418	broad.mit.edu	37	11	14282211	14282211	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPPL2A	84888	broad.mit.edu	37	15	51031986	51031986	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY3	10251	broad.mit.edu	37	X	155004396	155004396	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55648317	55648317	+	5'Flank	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653030	55653030	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653337	55653337	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653339	55653339	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55659225	55659225	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158618162	158618162	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158644206	158644207	+	Nonsense_Mutation	DNP	AG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45646910	45646910	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45646913	45646913	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30724540	30724540	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP54	6729	broad.mit.edu	37	14	35468640	35468640	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP54	6729	broad.mit.edu	37	14	35468642	35468642	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK2	6733	broad.mit.edu	37	7	104785767	104785767	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPRB	58477	broad.mit.edu	37	3	133538673	133538673	+	3'UTR	SNP	T	C	C	rs114364343	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99921831	99921831	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2812973	2812973	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149509779	149509779	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSR4	6748	broad.mit.edu	37	X	153062964	153062964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX1	6756	broad.mit.edu	37	X	48123044	48123044	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48046184	48046184	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53030987	53030987	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107422992	107422992	+	3'UTR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107450570	107450570	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76779636	76779636	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA2	8128	broad.mit.edu	37	15	92981651	92981651	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA5	29906	broad.mit.edu	37	18	44260275	44260275	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA5	29906	broad.mit.edu	37	18	44268653	44268653	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104015988	104015988	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104099529	104099529	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104122871	104122871	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99795007	99795007	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33686831	33686831	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD4	134429	broad.mit.edu	37	5	110842999	110842999	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191941029	191941029	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT6	6778	broad.mit.edu	37	12	57496082	57496082	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU1	6780	broad.mit.edu	37	20	47734826	47734826	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171479898	171479898	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171509466	171509466	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23808851	23808851	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5332984	5332984	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32C	282974	broad.mit.edu	37	10	134041649	134041649	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK4	6789	broad.mit.edu	37	20	43629814	43629814	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STMN2	11075	broad.mit.edu	37	8	80577013	80577013	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML3	161003	broad.mit.edu	37	13	39564698	39564698	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48896865	48896865	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA8	346673	broad.mit.edu	37	7	134928142	134928142	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STYK1	55359	broad.mit.edu	37	12	10786572	10786572	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUGT1P1	441394	broad.mit.edu	37	9	33510653	33510653	+	RNA	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF1	23213	broad.mit.edu	37	8	70540211	70540211	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1A2	6799	broad.mit.edu	37	16	28603402	28603402	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70620591	70620591	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27005252	27005252	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27017260	27017260	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149879434	149879434	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75576774	75576774	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113148238	113148239	+	Missense_Mutation	DNP	GG	TT	TT	rs10817003	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113208289	113208289	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113234499	113234499	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29775094	29775094	+	Missense_Mutation	SNP	G	A	A	rs149082592	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29812654	29812654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109306216	109306216	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115523985	115523985	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10906329	10906329	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85656358	85656358	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	32909546	32909546	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152711599	152711599	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64408830	64408830	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64635688	64635688	+	Silent	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT12	91683	broad.mit.edu	37	11	66797764	66797764	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT14	255928	broad.mit.edu	37	1	210273453	210273453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT3	84258	broad.mit.edu	37	19	51132540	51132540	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40853820	40853820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114680353	114680353	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85456886	85456886	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85468567	85468567	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR8	83551	broad.mit.edu	37	6	132874334	132874334	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39813767	39813767	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39813912	39813912	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123989798	123989798	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2A	6871	broad.mit.edu	37	17	35797731	35797731	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222757545	222757545	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF5L	27097	broad.mit.edu	37	1	229730411	229730411	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	29990035	29990035	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	29998855	29998855	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118599963	118599963	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33453500	33453500	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19166909	19166909	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R16	50833	broad.mit.edu	37	7	122635593	122635593	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAX1BP1	8887	broad.mit.edu	37	7	27827145	27827145	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77923505	77923505	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60342471	60342471	+	RNA	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348198	60348198	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348783	60348783	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17447954	17447954	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101655070	101655070	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9684332	9684332	+	3'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBPL1	9519	broad.mit.edu	37	6	134303865	134303865	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX10	347853	broad.mit.edu	37	11	67402363	67402363	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85470001	85470001	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79286474	79286474	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCERG1	10915	broad.mit.edu	37	5	145883576	145883576	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF20	6942	broad.mit.edu	37	22	42609766	42609766	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF25	22980	broad.mit.edu	37	16	89965309	89965309	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152080784	152080784	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11	6954	broad.mit.edu	37	6	35090037	35090037	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124171699	124171699	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDP1	55775	broad.mit.edu	37	14	90485646	90485646	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDP2	51567	broad.mit.edu	37	6	24666674	24666674	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD10	126668	broad.mit.edu	37	1	154520070	154520070	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179558219	179558219	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179619970	179619970	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179631268	179631268	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179659901	179659901	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179660007	179660007	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46663754	46663754	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD4	7004	broad.mit.edu	37	12	3120265	3120265	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27185502	27185502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53449057	53449057	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET3	200424	broad.mit.edu	37	2	74328907	74328907	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX10	54881	broad.mit.edu	37	9	103092305	103092305	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56729334	56729334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2	7024	broad.mit.edu	37	12	51502724	51502725	+	Intron	DNP	CG	AA	AA	rs116962528	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115614261	115614261	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218607769	218607769	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44943247	44943247	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGS1	96764	broad.mit.edu	37	8	56711824	56711824	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGS1	96764	broad.mit.edu	37	8	56723472	56723472	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133973164	133973164	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133995688	133995688	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEM4	117145	broad.mit.edu	37	1	151867517	151867517	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122758527	122758527	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122760538	122760538	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD1P1	374500	broad.mit.edu	37	13	52863978	52863978	+	RNA	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11468710	11468710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAL1	7073	broad.mit.edu	37	10	121337349	121337349	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32585807	32585807	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32589888	32589888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32825349	32825349	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156381395	156381395	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82319826	82319826	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166976235	166976235	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166999115	166999115	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98165037	98165037	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	62989842	62989842	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120474737	120474737	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476443	120476443	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR8	51311	broad.mit.edu	37	X	12939284	12939284	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19474774	19474774	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO5A	145942	broad.mit.edu	37	15	38229100	38229100	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEFF2	23671	broad.mit.edu	37	2	193044448	193044448	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	125834246	125834246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126135350	126135350	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126139132	126139132	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32957256	32957256	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32964379	32964379	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM135	65084	broad.mit.edu	37	11	86802403	86802403	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM139	135932	broad.mit.edu	37	7	142983814	142983814	+	Silent	SNP	G	A	A	rs146576406		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM147	10430	broad.mit.edu	37	19	36038152	36038152	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM149	79713	broad.mit.edu	37	19	36236460	36236460	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161B	153396	broad.mit.edu	37	5	87494826	87494826	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM175	84286	broad.mit.edu	37	4	945483	945483	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15425104	15425104	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM196	256130	broad.mit.edu	37	7	19761705	19761705	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM198	130612	broad.mit.edu	37	2	220413975	220413975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM19	55266	broad.mit.edu	37	12	72094844	72094844	+	3'UTR	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130761606	130761606	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762699	130762699	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27263287	27263287	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM231	79583	broad.mit.edu	37	16	75576504	75576504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM2	23670	broad.mit.edu	37	9	74331502	74331502	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM48	55706	broad.mit.edu	37	1	54259012	54259012	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM59L	25789	broad.mit.edu	37	19	18731227	18731227	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM66	51669	broad.mit.edu	37	8	29927087	29927087	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM72	643236	broad.mit.edu	37	10	45430239	45430239	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM80	283232	broad.mit.edu	37	11	702964	702964	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87A	25963	broad.mit.edu	37	15	42529730	42529730	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87B	84910	broad.mit.edu	37	2	112832511	112832511	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM8A	58986	broad.mit.edu	37	16	424493	424493	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68934426	68934426	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19701475	19701475	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS7	344805	broad.mit.edu	37	3	111780676	111780676	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMUB1	83590	broad.mit.edu	37	7	150779566	150779566	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117783521	117783521	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10B	8795	broad.mit.edu	37	8	22881808	22881808	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNC2	7125	broad.mit.edu	37	20	44455854	44455854	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74663917	74663917	+	5'Flank	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74716289	74716289	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74957895	74957895	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175097675	175097675	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO3	23534	broad.mit.edu	37	7	128622270	128622270	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO3	23534	broad.mit.edu	37	7	128629892	128629892	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC18	84629	broad.mit.edu	37	7	5364053	5364053	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6A	27327	broad.mit.edu	37	16	24801619	24801619	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175332037	175332037	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175333981	175333981	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218749786	218749786	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47342932	47342932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS4	84951	broad.mit.edu	37	17	38641291	38641291	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53BP1	7158	broad.mit.edu	37	15	43749322	43749322	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577123	7577123	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189590799	189590799	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18048061	18048061	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144344907	144344907	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1507879	1507879	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPRA1	131601	broad.mit.edu	37	3	127294545	127294545	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186295043	186295043	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20039416	20039416	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF6	7189	broad.mit.edu	37	11	36518591	36518591	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML3	340206	broad.mit.edu	37	6	41184896	41184896	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML4	285852	broad.mit.edu	37	6	41196846	41196846	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72680634	72680634	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	73012840	73012840	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30131749	30131749	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30138348	30138348	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM21	6737	broad.mit.edu	37	11	4409789	4409789	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM22	10346	broad.mit.edu	37	11	5740815	5740815	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM24	8805	broad.mit.edu	37	7	138235712	138235712	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM27	5987	broad.mit.edu	37	6	28889580	28889580	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM32	22954	broad.mit.edu	37	9	119460463	119460463	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140397271	140397271	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM6-TRIM34	445372	broad.mit.edu	37	11	5653697	5653697	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP11	9321	broad.mit.edu	37	14	92480596	92480596	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230701512	230701512	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2A	27037	broad.mit.edu	37	22	20100126	20100126	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5922757	5922757	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72958754	72958754	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC3	7222	broad.mit.edu	37	4	122824023	122824023	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101353888	101353888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101374853	101374853	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31320594	31320594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31329943	31329943	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31355409	31355409	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45825683	45825683	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49703734	49703734	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77407756	77407756	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77442874	77442874	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM7	54822	broad.mit.edu	37	15	50854097	50854097	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234835272	234835272	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234851149	234851149	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234904817	234904817	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16330853	16330853	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3430103	3430104	+	Intron	INS	-	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV4	59341	broad.mit.edu	37	12	110230345	110230345	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98589832	98589833	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98596555	98596555	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRY6	154754	broad.mit.edu	37	7	142481996	142481997	+	Intron	INS	-	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141955042	141955042	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D4	81628	broad.mit.edu	37	7	100075602	100075602	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN2	80746	broad.mit.edu	37	3	12545147	12545147	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA10	80705	broad.mit.edu	37	2	99721956	99721956	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51870276	51870276	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51871406	51871406	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769068	31769068	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67861260	67861260	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN1	10103	broad.mit.edu	37	1	46649794	46649794	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN8	7103	broad.mit.edu	37	12	71531812	71531812	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL2	64061	broad.mit.edu	37	X	53111967	53111967	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC1	7265	broad.mit.edu	37	5	159437824	159437824	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166737205	166737205	+	Silent	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166788366	166788366	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC29	83894	broad.mit.edu	37	4	147830185	147830185	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTK	7272	broad.mit.edu	37	6	80746240	80746240	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219611007	219611007	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863380	46863381	+	Intron	DNP	CC	GG	GG			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL8	164714	broad.mit.edu	37	22	50485773	50485773	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179403316	179403316	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179435496	179435496	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457285	179457285	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179468758	179468758	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179479056	179479056	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179494224	179494227	+	Intron	DEL	AATA	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179500111	179500111	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179590276	179590276	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179596304	179596304	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179597928	179597928	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179598427	179598427	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605626	179605626	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179615422	179615422	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179633572	179633572	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179635847	179635847	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179638849	179638850	+	Intron	DNP	GG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179648929	179648929	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72218757	72218757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH3	80727	broad.mit.edu	37	7	2687693	2687693	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA1B	10376	broad.mit.edu	37	12	49521755	49521755	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19753702	19753702	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBAL3	79861	broad.mit.edu	37	10	5442724	5442724	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBBP5	643224	broad.mit.edu	37	9	141071325	141071325	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBG1	7283	broad.mit.edu	37	17	40766531	40766531	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37890184	37890184	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37905093	37905093	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37936532	37936532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC5	81567	broad.mit.edu	37	6	7899820	7899820	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNIP	10628	broad.mit.edu	37	1	145439780	145439780	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNIP	10628	broad.mit.edu	37	1	145439809	145439809	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41865772	41865772	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1B	441250	broad.mit.edu	37	7	72286021	72286021	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70980055	70980055	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA2	10054	broad.mit.edu	37	19	34951384	34951384	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA2	10054	broad.mit.edu	37	19	34957912	34957912	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA52	7311	broad.mit.edu	37	19	18685981	18685981	+	3'UTR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68504786	68504786	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3B	84959	broad.mit.edu	37	11	122653623	122653623	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2J2	118424	broad.mit.edu	37	1	1190769	1190769	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2MP1	606551	broad.mit.edu	37	16	34404181	34404181	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3A	7337	broad.mit.edu	37	15	25585362	25585362	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10221161	10221162	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBL7	84993	broad.mit.edu	37	15	74738690	74738690	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43352417	43352417	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42582899	42582899	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42650816	42650816	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42656209	42656209	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103301722	103301722	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103317410	103317410	+	Silent	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103327008	103327008	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCK2	7371	broad.mit.edu	37	1	165877060	165877060	+	Nonstop_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128873837	128873837	+	Splice_Site	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128880772	128880772	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69693259	69693259	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69870792	69870793	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69962824	69962824	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35991213	35991213	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1L	23074	broad.mit.edu	37	12	100444090	100444090	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULBP1	80329	broad.mit.edu	37	6	150289779	150289779	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20352561	20352561	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20362003	20362003	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54306042	54306042	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54793234	54793234	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54914548	54914548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73051452	73051452	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35425773	35425773	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35543998	35543998	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35624702	35624702	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167711556	167711556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48146928	48146928	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCR11	10975	broad.mit.edu	37	19	1599497	1599497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229771777	229771778	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126222750	126222750	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215807697	215807697	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215823926	215823926	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216370014	216370014	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP11	8237	broad.mit.edu	37	X	47103906	47103906	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP12	219333	broad.mit.edu	37	13	27664409	27664409	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP20	10868	broad.mit.edu	37	9	132620472	132620472	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP21	27005	broad.mit.edu	37	1	161133471	161133471	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP25	29761	broad.mit.edu	37	21	17197314	17197314	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP36	57602	broad.mit.edu	37	17	76794348	76794348	+	3'UTR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP47	55031	broad.mit.edu	37	11	11957904	11957904	+	Missense_Mutation	SNP	G	T	T	rs36096029		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6969609	6969609	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5041121	5041121	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	9004656	9004656	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41047386	41047386	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41055726	41055726	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9Y	8287	broad.mit.edu	37	Y	14833971	14833971	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52598371	52598371	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP15	84135	broad.mit.edu	37	5	72874777	72874777	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144719295	144719295	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144758883	144758883	+	Splice_Site	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	145172051	145172051	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75718702	75718702	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111421466	111421466	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19026649	19026649	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30806652	30806652	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30974316	30974316	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38539365	38539365	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38539569	38539569	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38894492	38894492	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42767242	42767242	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43198880	43198880	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	47729366	47729366	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52443419	52443419	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54149146	54149146	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54172239	54172239	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65930478	65930478	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107047175	107047175	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110697186	110697186	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124120465	124120465	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18978089	18978089	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23427718	23427718	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	25610135	25610135	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4231492	4231492	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48969924	48969924	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48970081	48970081	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49120539	49120539	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49897978	49897978	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55234809	55234809	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216845	56216845	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56739277	56739277	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58155814	58155814	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58189775	58189775	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59299557	59299557	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79700037	79700037	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94040950	94040950	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	107665399	107665399	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499150	129499150	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	19566411	19566411	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	22161827	22161827	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27274860	27274860	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	2891038	2891038	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33139356	33139356	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38423352	38423352	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38926821	38926821	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	44053737	44053737	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	44053841	44053841	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	53125133	53125133	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55790235	55790235	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	56775130	56775130	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63396280	63396280	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63397882	63397882	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68429859	68429860	+	IGR	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68430508	68430508	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	69678546	69678546	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	69678856	69678856	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8169844	8169845	+	IGR	DNP	CC	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111589736	111589736	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111590475	111590475	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	25091791	25091791	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	28368107	28368107	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	44542847	44542847	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983187	53983187	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59103085	59103085	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	60849881	60849881	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532461	65532461	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	73835052	73835052	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	91924744	91924744	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146266	20146266	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20182054	20182054	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20265018	20265018	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	32711941	32711941	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39684559	39684559	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43744721	43744721	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44547075	44547075	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45332224	45332224	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45333715	45333715	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49840923	49840923	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	64228665	64228665	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95098487	95098487	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103258	96103258	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20433811	20433811	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20845195	20845195	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21215908	21215908	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22782286	22782286	+	IGR	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23402512	23402512	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	27210604	27210604	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	34788018	34788018	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35414054	35414054	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50086774	50086774	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50710390	50710390	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96984942	96984942	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20598755	20598755	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20618249	20618249	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	2871764	2871764	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077754	32077754	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32224785	32224785	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926794	32926794	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33006205	33006205	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33408635	33408635	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33489859	33489859	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33497660	33497660	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33504535	33504535	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605646	33605646	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33629980	33629980	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33661274	33661274	+	IGR	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33661645	33661645	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33740711	33740711	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768084	33768084	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33778679	33778679	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33941925	33941925	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34327815	34327815	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34338711	34338711	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34571094	34571094	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51098219	51098219	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55780724	55780724	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16747239	16747239	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20625366	20625366	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20679196	20679196	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26081186	26081186	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30439224	30439224	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	39604892	39604892	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	44363400	44363400	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51512500	51512500	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52031541	52031541	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52032048	52032048	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	6703294	6703294	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68237487	68237487	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69617231	69617231	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12192424	12192424	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12913968	12913968	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14146536	14146536	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14201208	14201208	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14629833	14629833	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14867939	14867939	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15303329	15303329	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	22270038	22270038	+	IGR	SNP	G	C	C	rs139074896	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	33853831	33853831	+	IGR	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68893222	68893222	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68893706	68893706	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	12671361	12671361	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	156755	156755	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15686685	15686685	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	16013809	16013809	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	18141507	18141507	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20874144	20874144	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20874608	20874608	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498084	22498084	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22499665	22499665	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23158605	23158605	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35873052	35873052	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35874890	35874890	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36448103	36448103	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43801759	43801759	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43807272	43807272	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44977179	44977179	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51971682	51971682	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104469948	104469948	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434784	106434784	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	119157568	119157568	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120110677	120110677	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120396123	120396123	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149037726	149037726	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149039053	149039053	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149093898	149093898	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149094499	149094499	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149115054	149115054	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157044094	157044094	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158548639	158548639	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245277	166245277	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245440	166245440	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245635	166245635	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	167131796	167131796	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173110885	173110885	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175891248	175891248	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532742	187532742	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192963671	192963671	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	211834345	211834345	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220641260	220641260	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	24022964	24022964	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242079421	242079421	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242223125	242223125	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902365	247902365	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247991776	247991776	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248344365	248344365	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39176238	39176238	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	68708286	68708286	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	73570805	73570805	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91358461	91358461	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10330175	10330175	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10366451	10366451	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18466030	18466030	+	IGR	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23899387	23899387	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29862143	29862143	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	41859447	41859447	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	5272955	5272955	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6194678	6194678	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10856830	10856830	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10863176	10863176	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916727	14916727	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20617194	20617194	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21132073	21132073	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24474571	24474571	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32434759	32434759	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16364945	16364945	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17340483	17340483	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	30939533	30939533	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106961474	106961474	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107315076	107315076	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	110494708	110494708	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	128004739	128004739	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130751154	130751154	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130987987	130987987	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130988144	130988144	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131026547	131026547	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131415057	131415057	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132144810	132144810	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132144819	132144819	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132361586	132361586	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132369255	132369255	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132381459	132381459	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384275	132384276	+	IGR	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133019854	133019854	+	IGR	SNP	C	G	G	rs4018095		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162361446	162361446	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162362583	162362583	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	165178611	165178611	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168571022	168571022	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17566665	17566665	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176707954	176707954	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187867823	187867823	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	188690064	188690064	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	189093051	189093051	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194141621	194141621	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	196447971	196447971	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210046450	210046450	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	233899775	233899775	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047269	42047269	+	IGR	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	43024398	43024398	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49142386	49142386	+	IGR	DEL	T	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49510086	49510086	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	55662599	55662599	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	83446245	83446245	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893845	91893845	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91927369	91927369	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92118519	92118519	+	IGR	SNP	C	G	G	rs12620719		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1002658	1002658	+	IGR	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116546118	116546118	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	11924456	11924456	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	122036557	122036557	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	135924667	135924667	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137599329	137599329	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	142896250	142896250	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145241511	145241511	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145402461	145402461	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148704994	148704994	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149702180	149702180	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	15183587	15183587	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	163719408	163719408	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	175786040	175786040	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	175786222	175786222	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	179182550	179182550	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180041981	180041981	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180042076	180042076	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	190549469	190549469	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	194476943	194476943	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	80213659	80213659	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856986	82856986	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87101017	87101017	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87101162	87101162	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87679598	87679598	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90251608	90251608	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96068560	96068560	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96386672	96386672	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96386674	96386674	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96386795	96386795	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96386800	96386800	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97957400	97957400	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98030704	98030704	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	111781712	111781712	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	111866341	111866341	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113606319	113606319	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	117519538	117519538	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	117519580	117519580	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	117520460	117520460	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	119431006	119431006	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130058841	130058841	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137276440	137276440	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	151948578	151948578	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	156306659	156306659	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165578246	165578246	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	176415849	176415849	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189310762	189310762	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	24773663	24773663	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	41844087	41844087	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	46726402	46726402	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57460528	57460528	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	83197335	83197335	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	83501648	83501648	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105751701	105751701	+	IGR	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120952323	120952323	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14640049	14640049	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14640368	14640368	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	153938971	153938971	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	179513844	179513844	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20305059	20305059	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	2585628	2585628	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	2585672	2585672	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911036	25911036	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29881825	29881825	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	54848251	54848251	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	74225810	74225810	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	74227629	74227629	+	IGR	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	76878888	76878888	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	78005627	78005627	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	85383674	85383674	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97675182	97675182	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	113544635	113544635	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121729665	121729665	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975816	121975816	+	IGR	SNP	G	T	T	rs145190676	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	147728876	147728876	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27491317	27491317	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29068965	29068965	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29150057	29150057	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29230553	29230554	+	IGR	DNP	GG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29236457	29236457	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	31487410	31487410	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	3179661	3179661	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	41276324	41276324	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48182197	48182197	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50167962	50167962	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	51275318	51275318	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	56894581	56894581	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	7482504	7482504	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	87607429	87607429	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	88985968	88985968	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97096753	97096753	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	122634688	122634689	+	IGR	DNP	GG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	128173860	128173861	+	IGR	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399152	136399152	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399973	136399973	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	139187316	139187316	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143815664	143815664	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	15741036	15741036	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	21260533	21260533	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	21260893	21260893	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27501569	27501569	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	37625889	37625889	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56230934	56230934	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56357013	56357013	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358912	56358912	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665412	56665412	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56978344	56978344	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57245202	57245202	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57268698	57268698	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57484883	57484883	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028393	63028393	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63029525	63029525	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63160879	63160879	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354761	63354761	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63602401	63602401	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64196879	64196879	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64800547	64800547	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6975751	6975751	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	7217831	7217831	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84612866	84612866	+	IGR	SNP	G	T	T	rs55841283		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766245	9766245	+	IGR	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	102236499	102236499	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106208964	106208964	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111821699	111821699	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	119774117	119774117	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36953273	36953273	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126624	43126624	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	4985709	4985709	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64048905	64048905	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	81507033	81507033	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88802011	88802011	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103494030	103494031	+	IGR	DNP	CA	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	110859868	110859868	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	120845304	120845304	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44174931	44174931	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76089548	76089548	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76089589	76089589	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76264270	76264270	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84674611	84674611	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90470965	90470965	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90796040	90796040	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100057228	100057228	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134744217	134744217	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134745801	134745801	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134772996	134772996	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134808879	134808879	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135378192	135378192	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135378201	135378201	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135378583	135378583	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135378741	135378741	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135378831	135378831	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135378868	135378868	+	IGR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136743136	136743136	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136743343	136743343	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145701753	145701753	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146307200	146307200	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25048110	25048110	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25048121	25048121	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26705849	26705849	+	IGR	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27535959	27535959	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	43137636	43137636	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52635807	52635807	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52862481	52862481	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57792753	57792753	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57960690	57960690	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58011749	58011749	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64491687	64491687	+	IGR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65275372	65275372	+	IGR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72989253	72989253	+	IGR	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72989364	72989364	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75556183	75556183	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87351640	87351640	+	IGR	SNP	G	C	C	rs145370655	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89368698	89368698	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89544772	89544772	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92477417	92477417	+	IGR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	94754827	94754827	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97163091	97163091	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14092499	14092499	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	28479845	28479845	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	28779560	28779560	+	IGR	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9904951	9904951	+	IGR	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9905317	9905317	+	IGR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70815929	70815929	+	Intron	SNP	C	A	A	rs117267381	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL2	57216	broad.mit.edu	37	1	160389247	160389247	+	Silent	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30889142	30889142	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	77896678	77896678	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108299900	108299900	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX1	11023	broad.mit.edu	37	10	118896283	118896283	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82816053	82816053	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82816423	82816423	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82832966	82832966	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837427	82837427	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177608675	177608675	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIM	7431	broad.mit.edu	37	10	17278464	17278464	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R4	317703	broad.mit.edu	37	19	53770647	53770647	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79971823	79971823	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100245269	100245269	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62168014	62168014	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62320619	62320620	+	Splice_Site	DNP	CC	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2843379	2843379	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS28	51160	broad.mit.edu	37	8	145649195	145649195	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33B	26276	broad.mit.edu	37	15	91549109	91549109	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS36	51028	broad.mit.edu	37	13	53007779	53007779	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS45	11311	broad.mit.edu	37	1	150040772	150040772	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS72	6944	broad.mit.edu	37	1	151149508	151149508	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG10	54621	broad.mit.edu	37	12	118533308	118533308	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM1	284415	broad.mit.edu	37	19	54545341	54545341	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2L	128434	broad.mit.edu	37	20	36560130	36560130	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98709474	98709475	+	Intron	DNP	AG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61045799	61045799	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6125812	6125812	+	Silent	SNP	G	A	A	rs61750602		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS	7453	broad.mit.edu	37	14	100803386	100803387	+	Intron	INS	-	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP2NL	164684	broad.mit.edu	37	22	42205007	42205007	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	70853231	70853231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR22	114049	broad.mit.edu	37	7	73101311	73101311	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR11	55717	broad.mit.edu	37	10	122660514	122660514	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177067216	177067216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR37	22884	broad.mit.edu	37	10	1170222	1170222	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74976635	74976635	+	Splice_Site	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR60	55112	broad.mit.edu	37	7	158669353	158669353	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR61	80349	broad.mit.edu	37	15	78584957	78584957	+	Splice_Site	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR61	80349	broad.mit.edu	37	15	78587947	78587947	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241953764	241953764	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49049550	49049550	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR75	84128	broad.mit.edu	37	2	190323581	190323582	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54385314	54385314	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54688166	54688166	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR88	126248	broad.mit.edu	37	19	33663231	33663231	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDYHV1	55093	broad.mit.edu	37	8	124449469	124449469	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141430062	141430062	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC1	58189	broad.mit.edu	37	16	84352936	84352936	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC5	149708	broad.mit.edu	37	20	43739421	43739421	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI2	26100	broad.mit.edu	37	7	5239262	5239262	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	994341	994341	+	Silent	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96054484	96054484	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7A	7476	broad.mit.edu	37	3	13896298	13896298	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT8B	7479	broad.mit.edu	37	10	102238745	102238745	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT9B	7484	broad.mit.edu	37	17	44950057	44950057	+	Silent	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB2	55884	broad.mit.edu	37	12	118480496	118480496	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108589794	108589794	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108641840	108641840	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32413568	32413568	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC2	80014	broad.mit.edu	37	4	184181991	184181991	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCR1	2829	broad.mit.edu	37	3	46062476	46062476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39228545	39228545	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168100460	168100460	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168101337	168101337	+	Silent	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168107012	168107012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168114871	168114871	+	3'UTR	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73066046	73066046	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	10782407	10782407	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	11058274	11058274	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR7	343702	broad.mit.edu	37	20	30584558	30584558	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC1	7515	broad.mit.edu	37	19	44058904	44058904	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC2	7516	broad.mit.edu	37	7	152373292	152373292	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YKT6	10652	broad.mit.edu	37	7	44244335	44244335	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135756664	135756664	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100349995	100349995	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167033485	167033485	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167045790	167045790	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED2	79413	broad.mit.edu	37	3	111312388	111312388	+	3'UTR	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50278436	50278436	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB25	7597	broad.mit.edu	37	14	64916151	64916159	+	3'UTR	DEL	CTTCCTTTA	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB2	57621	broad.mit.edu	37	6	151694769	151694769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB49	166793	broad.mit.edu	37	4	4304252	4304252	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47584717	47584717	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HC1	51530	broad.mit.edu	37	7	129688778	129688778	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC11	23318	broad.mit.edu	37	1	52961256	52961256	+	Intron	SNP	C	A	A	rs114498228	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC2	54877	broad.mit.edu	37	18	60241759	60241759	+	Silent	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207176120	207176120	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207176151	207176151	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	825153	825153	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC8P1	150244	broad.mit.edu	37	22	23740509	23740509	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145162655	145162655	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77619978	77619978	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77763587	77763587	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77764096	77764096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR2	23217	broad.mit.edu	37	19	3816658	3816658	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR	51663	broad.mit.edu	37	5	32355983	32355983	+	Silent	SNP	C	G	G	rs139087778	byFrequency	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73464512	73464512	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC1	7545	broad.mit.edu	37	3	147131115	147131115	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25264435	25264435	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF131	7690	broad.mit.edu	37	5	43174846	43174846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF134	7693	broad.mit.edu	37	19	58132534	58132534	+	Missense_Mutation	SNP	C	G	G	rs34357677	by1000genomes	TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58579104	58579104	+	Missense_Mutation	SNP	G	T	T	rs148350290		TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF155	7711	broad.mit.edu	37	19	44500732	44500732	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF185	7739	broad.mit.edu	37	X	152083041	152083041	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF202	7753	broad.mit.edu	37	11	123601052	123601052	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22153619	22153619	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44936498	44936498	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF234	10780	broad.mit.edu	37	19	44661726	44661726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244218404	244218404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58718367	58718367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87969756	87969756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF317	57693	broad.mit.edu	37	19	9269576	9269576	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF320	162967	broad.mit.edu	37	19	53368655	53368655	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF335	63925	broad.mit.edu	37	20	44588902	44588902	+	Silent	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38345076	38345076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64429928	64429928	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37A	7587	broad.mit.edu	37	10	38403744	38403744	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF404	342908	broad.mit.edu	37	19	44377026	44377026	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF420	147923	broad.mit.edu	37	19	37580121	37580121	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF426	79088	broad.mit.edu	37	19	9643518	9643518	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF431	170959	broad.mit.edu	37	19	21366002	21366002	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF432	9668	broad.mit.edu	37	19	52537917	52537917	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF460	10794	broad.mit.edu	37	19	57802137	57802137	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109692040	109692040	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF480	147657	broad.mit.edu	37	19	52825630	52825630	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF486	90649	broad.mit.edu	37	19	20308560	20308560	+	Silent	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF491	126069	broad.mit.edu	37	19	11917808	11917808	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF493	284443	broad.mit.edu	37	19	21587848	21587848	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF493	284443	broad.mit.edu	37	19	21607028	21607028	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF496	84838	broad.mit.edu	37	1	247464362	247464362	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF500	26048	broad.mit.edu	37	16	4815411	4815411	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF502	91392	broad.mit.edu	37	3	44751714	44751714	+	5'Flank	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62596021	62596021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806833	22806833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807008	22807008	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807248	22807248	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22902179	22902179	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22907627	22907627	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30935448	30935448	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039574	31039574	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039763	31039763	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	64810	64810	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52394293	52394293	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52399823	52399823	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF664	144348	broad.mit.edu	37	12	124497156	124497156	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF667	63934	broad.mit.edu	37	19	56953439	56953439	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363680	22363680	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF678	339500	broad.mit.edu	37	1	227826879	227826879	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63709635	63709635	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF700	90592	broad.mit.edu	37	19	12060814	12060814	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF738	148203	broad.mit.edu	37	19	21567508	21567508	+	3'UTR	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF763	284390	broad.mit.edu	37	19	12087964	12087964	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF792	126375	broad.mit.edu	37	19	35451811	35451812	+	Missense_Mutation	DNP	CG	AA	AA			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185800875	185800875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185803359	185803359	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF828	283489	broad.mit.edu	37	13	115089271	115089271	+	5'UTR	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57765979	57765979	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57769381	57769381	+	Silent	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57771065	57771065	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF862	643641	broad.mit.edu	37	7	149557754	149557754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF99	7652	broad.mit.edu	37	19	22939970	22939970	+	Silent	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF99	7652	broad.mit.edu	37	19	22940130	22940130	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNHIT3	9326	broad.mit.edu	37	17	34842745	34842745	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21210996	21210996	+	Intron	SNP	A	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21217083	21217083	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238050727	238050727	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701251	56701251	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701293	56701293	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM1	90204	broad.mit.edu	37	20	44512223	44512223	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187702135	187702135	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58117794	58117794	+	3'UTR	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3917580	3917580	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3975803	3975803	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30925275	30925275	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	24736571	24736571	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31267667	31267667	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410910	95410910	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22204968	22204968	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22363197	22363197	+	Intron	SNP	T	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22466138	22466138	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22565044	22565044	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	31290871	31290871	+	RNA	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25429478	25429478	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76072886	76072886	+	Intron	SNP	C	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	90838482	90838482	+	5'Flank	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077427	32077427	+	RNA	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34740997	34740997	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25753395	25753395	+	Intron	DEL	G	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26596857	26596857	+	5'Flank	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26599160	26599160	+	5'Flank	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	43625811	43625811	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22785567	22785567	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	40148655	40148655	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43130453	43130453	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142727060	142727060	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146791799	146791799	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148891448	148891448	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	65451286	65451286	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	18846051	18846051	+	RNA	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672758	186672758	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186673634	186673634	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62373669	62373669	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78639843	78639843	+	RNA	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78639854	78639854	+	RNA	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89266154	89266154	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89513367	89513367	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90025202	90025202	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90108479	90108480	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90108500	90108500	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121688	90121688	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90211939	90211939	+	Intron	SNP	G	C	C			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90249533	90249533	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458050	90458050	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95613828	95613828	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95614108	95614108	+	5'Flank	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159819882	159819882	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180490795	180490795	+	Intron	SNP	T	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85165339	85165339	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166407	85166407	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24170396	24170396	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9908724	9908724	+	Intron	SNP	A	G	G			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9933212	9933212	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142008933	142008933	+	Intron	DEL	C	-	-			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045310	142045310	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231587	142231587	+	Intron	SNP	G	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142423368	142423368	+	Intron	SNP	T	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142448749	142448749	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142468215	142468215	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142469265	142469266	+	Intron	DNP	GG	TT	TT			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142499392	142499392	+	Intron	SNP	C	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64539127	64539127	+	Intron	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65157788	65157788	+	Intron	SNP	C	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90745251	90745251	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17118008	17118008	+	Intron	SNP	A	T	T			TCGA-05-4382-01A-01D-1265-08	TCGA-05-4382-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
