Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
WASF2	10163	broad.mit.edu	36	1	27611675	27611675	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	27611675	27611675	WASF2	1	G	G	C	42
HPCA	3208	broad.mit.edu	36	1	33127266	33127266	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			C	T	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	33127266	33127266	HPCA	1	C	C	T	19
CSF3R	1441	broad.mit.edu	36	1	36709817	36709817	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			T	A	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	36709817	36709817	CSF3R	1	T	T	A	56
SRSF11	9295	broad.mit.edu	36	1	70489053	70489053	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	70489053	70489053	SRSF11	1	G	G	T	33
NES	10763	broad.mit.edu	36	1	154907888	154907888	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	154907888	154907888	NES	1	G	G	C	41
CCDC19	25790	broad.mit.edu	36	1	158124868	158124868	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	158124868	158124868	CCDC19	1	G	G	C	42
NCF2	4688	broad.mit.edu	36	1	181801516	181801516	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			C	T	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	181801516	181801516	NCF2	1	C	C	T	31
IGFN1	91156	broad.mit.edu	36	1	199450000	199450000	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	199450000	199450000	IGFN1	1	G	G	T	48
RPS6KC1	26750	broad.mit.edu	36	1	211480670	211480670	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	211480670	211480670	RPS6KC1	1	G	G	A	47
RYR2	6262	broad.mit.edu	36	1	235844443	235844443	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	T	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	235844443	235844443	RYR2	1	G	G	T	34
EPC1	80314	broad.mit.edu	36	10	32616103	32616103	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	32616103	32616103	EPC1	10	G	G	T	36
JMJD1C	221037	broad.mit.edu	36	10	64606169	64606169	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			T	C	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	64606169	64606169	JMJD1C	10	T	T	C	60
TACR2	6865	broad.mit.edu	36	10	70846081	70846081	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	70846081	70846081	TACR2	10	C	C	G	22
DUPD1	338599	broad.mit.edu	36	10	76473583	76473583	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	76473583	76473583	DUPD1	10	G	G	A	48
LOXL4	84171	broad.mit.edu	36	10	100007887	100007887	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	100007887	100007887	LOXL4	10	C	C	T	23
DUSP5	1847	broad.mit.edu	36	10	112259970	112259970	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	112259970	112259970	DUSP5	10	C	C	A	30
B4GALNT4	338707	broad.mit.edu	36	11	371728	371728	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	371728	371728	B4GALNT4	11	A	A	G	14
KRT6B	3854	broad.mit.edu	36	12	51131927	51131927	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	51131927	51131927	KRT6B	12	T	T	C	56
SOAT2	8435	broad.mit.edu	36	12	51795457	51795457	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	51795457	51795457	SOAT2	12	G	G	C	45
ZFC3H1	196441	broad.mit.edu	36	12	70299415	70299415	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	70299415	70299415	ZFC3H1	12	A	A	C	5
CDK17	5128	broad.mit.edu	36	12	95241885	95241885	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			C	T	C	C	Unknown	Valid	Somatic	x	x	454_PCR_WGA			x	Broad	Missense_Mutation	SNP	95241885	95241885	CDK17	12	C	C	T	21
GOLGA3	2802	broad.mit.edu	36	12	131894955	131894955	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	131894955	131894955	GOLGA3	12	T	T	G	52
FREM2	341640	broad.mit.edu	36	13	38161731	38161731	+	Missense_Mutation	SNP	C	C	A	rs41292755	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	38161731	38161731	FREM2	13	C	C	A	19
C15orf29	79768	broad.mit.edu	36	15	32226727	32226727	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	32226727	32226727	C15orf29	15	G	G	C	33
TMC3	342125	broad.mit.edu	36	15	79437872	79437872	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	79437872	79437872	TMC3	15	T	T	A	56
RAB26	25837	broad.mit.edu	36	16	2143355	2143355	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	2143355	2143355	RAB26	16	G	G	T	37
FBXL19	54620	broad.mit.edu	36	16	30865596	30865596	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	30865596	30865596	FBXL19	16	C	C	T	27
SETD1A	9739	broad.mit.edu	36	16	30890465	30890465	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	30890465	30890465	SETD1A	16	G	G	T	46
GPR179	440435	broad.mit.edu	36	17	33746454	33746454	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	33746454	33746454	GPR179	17	C	C	G	25
GH2	2689	broad.mit.edu	36	17	59311533	59311533	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	T	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	59311533	59311533	GH2	17	G	G	T	40
ICT1	3396	broad.mit.edu	36	17	70528198	70528198	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	70528198	70528198	ICT1	17	G	G	C	44
OSBPL1A	114876	broad.mit.edu	36	18	20012090	20012090	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	20012090	20012090	OSBPL1A	18	C	C	T	25
TMPRSS9	360200	broad.mit.edu	36	19	2352990	2352990	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	2352990	2352990	TMPRSS9	19	T	T	G	56
IER2	9592	broad.mit.edu	36	19	13125078	13125078	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	13125078	13125078	IER2	19	T	T	G	59
ATP13A1	57130	broad.mit.edu	36	19	19627160	19627160	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	19627160	19627160	ATP13A1	19	G	G	T	42
MTA3	57504	broad.mit.edu	36	2	42776439	42776439	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	42776439	42776439	MTA3	2	G	G	C	45
NRXN1	9378	broad.mit.edu	36	2	50611918	50611918	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	T	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	50611918	50611918	NRXN1	2	G	G	T	43
PTPN18	26469	broad.mit.edu	36	2	130833295	130833295	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			C	G	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	130833295	130833295	PTPN18	2	C	C	G	30
ZEB2	9839	broad.mit.edu	36	2	144863773	144863773	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			C	A	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	144863773	144863773	ZEB2	2	C	C	A	18
TTN	7273	broad.mit.edu	36	2	179162257	179162257	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			C	G	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	179162257	179162257	TTN	2	C	C	G	32
SYNJ1	8867	broad.mit.edu	36	21	32925915	32925915	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			A	G	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	32925915	32925915	SYNJ1	21	A	A	G	7
NDUFV3	4731	broad.mit.edu	36	21	43196549	43196549	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			A	G	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	43196549	43196549	NDUFV3	21	A	A	G	10
BID	637	broad.mit.edu	36	22	16606601	16606601	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	16606601	16606601	BID	22	C	C	G	28
C3orf54	389119	broad.mit.edu	36	3	49817266	49817266	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	49817266	49817266	C3orf54	3	C	C	T	23
CBLB	868	broad.mit.edu	36	3	106883277	106883277	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	106883277	106883277	CBLB	3	G	G	C	36
STXBP5L	9515	broad.mit.edu	36	3	122440601	122440601	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	122440601	122440601	STXBP5L	3	T	T	G	62
FBXO40	51725	broad.mit.edu	36	3	122828349	122828349	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	122828349	122828349	FBXO40	3	C	C	A	22
KLF15	28999	broad.mit.edu	36	3	127553477	127553477	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	127553477	127553477	KLF15	3	C	C	A	21
RAB7A	7879	broad.mit.edu	36	3	129999481	129999481	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	129999481	129999481	RAB7A	3	G	G	C	43
COL6A5	256076	broad.mit.edu	36	3	131642328	131642328	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	131642328	131642328	COL6A5	3	G	G	A	36
TFRC	7037	broad.mit.edu	36	3	197264753	197264753	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	197264753	197264753	TFRC	3	G	G	C	48
RFC1	5981	broad.mit.edu	36	4	39004595	39004595	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	39004595	39004595	RFC1	4	G	G	C	34
USP46	64854	broad.mit.edu	36	4	53171479	53171479	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	53171479	53171479	USP46	4	A	A	G	4
CEP72	55722	broad.mit.edu	36	5	677630	677630	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	677630	677630	CEP72	5	C	C	T	25
ADCY2	108	broad.mit.edu	36	5	7679422	7679422	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	7679422	7679422	ADCY2	5	G	G	A	40
OSMR	9180	broad.mit.edu	36	5	38969209	38969209	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			T	C	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	38969209	38969209	OSMR	5	T	T	C	51
MED23	9439	broad.mit.edu	36	6	131958997	131958997	+	Splice_Site_SNP	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	131958997	131958997	MED23	6	C	C	G	32
SPDYE1	285955	broad.mit.edu	36	7	44013461	44013461	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	44013461	44013461	SPDYE1	7	G	G	C	41
MDH2	4191	broad.mit.edu	36	7	75533567	75533567	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	75533567	75533567	MDH2	7	A	A	G	1
ACTL6B	51412	broad.mit.edu	36	7	100081855	100081855	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	100081855	100081855	ACTL6B	7	C	C	A	30
CUX1	1523	broad.mit.edu	36	7	101631602	101631602	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	101631602	101631602	CUX1	7	G	G	A	38
MGAM	8972	broad.mit.edu	36	7	141378037	141378037	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10			A	T	A	A	Unknown	Valid	Somatic	x	x	454_PCR_WGA			x	Broad	Missense_Mutation	SNP	141378037	141378037	MGAM	7	A	A	T	5
ATG9B	285973	broad.mit.edu	36	7	150345191	150345191	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	150345191	150345191	ATG9B	7	C	C	A	26
TTC35	9694	broad.mit.edu	36	8	109551288	109551288	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	109551288	109551288	TTC35	8	A	A	G	8
NLGN4X	57502	broad.mit.edu	36	X	5821458	5821458	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	5821458	5821458	NLGN4X	23	G	G	A	48
FAAH2	158584	broad.mit.edu	36	X	57335740	57335740	+	Splice_Site_SNP	SNP	T	T	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	57335740	57335740	FAAH2	23	T	T	G	59
ARHGEF9	23229	broad.mit.edu	36	X	62833729	62833729	+	Splice_Site_SNP	SNP	C	C	T	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	62833729	62833729	ARHGEF9	23	C	C	T	19
OPHN1	4983	broad.mit.edu	36	X	67371131	67371131	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	67371131	67371131	OPHN1	23	C	C	G	30
TBC1D8B	54885	broad.mit.edu	36	X	106000625	106000625	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	106000625	106000625	TBC1D8B	23	G	G	C	34
TP53	7157	broad.mit.edu	36	17	7519000	7519002	+	In_Frame_Del	DEL	GAG	GAG	-	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Del	DEL	7519000	7519002	TP53	17	GAG	GAG	-	45
ATP10B	23120	broad.mit.edu	36	5	159981990	159982020	+	Frame_Shift_Del	DEL	GCTCGGTGGTTGTGGACACCATGACAGAGTT	-	GCTCGGTGGTTGTGGACACCATGACAGAGTT	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Del	DEL	159981990	159982020	ATP10B	5	GCTCGGTGGTTGTGGACACCATGACAGAGTT	-	GCTCGGTGGTTGTGGACACCATGACAGAGTT	42
TTC16	158248	broad.mit.edu	36	9	129522388	129522389	+	Frame_Shift_Ins	INS	-	G	-	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Ins	INS	129522388	129522389	TTC16	9	-	G	-	5
BRWD3	254065	broad.mit.edu	36	X	79876317	79876330	+	Frame_Shift_Del	DEL	CCAAATAATATATT	-	CCAAATAATATATT	novel	Unknown	TCGA-24-1423-01	TCGA-24-1423-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Del	DEL	79876317	79876330	BRWD3	23	CCAAATAATATATT	-	CCAAATAATATATT	22
