Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
PTPRF	5792	broad.mit.edu	36	1	43847746	43847746	+	Nonsense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	43847746	43847746	PTPRF	1	C	C	G	18
SYT11	23208	broad.mit.edu	36	1	154104980	154104980	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	154104980	154104980	SYT11	1	C	C	A	18
ARHGAP30	257106	broad.mit.edu	36	1	159290802	159290802	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	159290802	159290802	ARHGAP30	1	C	C	A	19
NEBL	10529	broad.mit.edu	36	10	21174197	21174197	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	21174197	21174197	NEBL	10	C	C	T	24
SVIL	6840	broad.mit.edu	36	10	29861015	29861015	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	29861015	29861015	SVIL	10	G	G	A	33
IFIT2	3433	broad.mit.edu	36	10	91056285	91056285	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	91056285	91056285	IFIT2	10	C	C	G	32
TRPM5	29850	broad.mit.edu	36	11	2389306	2389306	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	2389306	2389306	TRPM5	11	G	G	A	33
OR51B6	390058	broad.mit.edu	36	11	5329645	5329645	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	5329645	5329645	OR51B6	11	G	G	A	44
OAS2	4939	broad.mit.edu	36	12	111927340	111927340	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	111927340	111927340	OAS2	12	C	C	A	28
TM6SF1	53346	broad.mit.edu	36	15	81596364	81596364	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	81596364	81596364	TM6SF1	15	C	C	T	26
ZP2	7783	broad.mit.edu	36	16	21130366	21130366	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	21130366	21130366	ZP2	16	C	C	A	26
TP53	7157	broad.mit.edu	36	17	7518933	7518933	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	7518933	7518933	TP53	17	T	T	C	51
SLC16A3	9123	broad.mit.edu	36	17	77788974	77788974	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	77788974	77788974	SLC16A3	17	G	G	C	40
MBP	4155	broad.mit.edu	36	18	72858147	72858147	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	72858147	72858147	MBP	18	G	G	A	38
NLRP12	91662	broad.mit.edu	36	19	58993342	58993342	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	58993342	58993342	NLRP12	19	A	A	T	7
ALMS1	7840	broad.mit.edu	36	2	73530813	73530813	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	73530813	73530813	ALMS1	2	A	A	G	3
SLC4A10	57282	broad.mit.edu	36	2	162515553	162515553	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	162515553	162515553	SLC4A10	2	G	G	A	47
TTN	7273	broad.mit.edu	36	2	179218999	179218999	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	179218999	179218999	TTN	2	G	G	A	35
SCG2	7857	broad.mit.edu	36	2	224170895	224170895	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	224170895	224170895	SCG2	2	C	C	T	19
YWHAB	7529	broad.mit.edu	36	20	42966059	42966059	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	42966059	42966059	YWHAB	20	C	C	G	17
PPDPF	79144	broad.mit.edu	36	20	61623317	61623317	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	61623317	61623317	PPDPF	20	G	G	T	43
IQCF3	401067	broad.mit.edu	36	3	51839526	51839526	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	51839526	51839526	IQCF3	3	G	G	A	40
SNTN	132203	broad.mit.edu	36	3	63624748	63624748	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	63624748	63624748	SNTN	3	C	C	A	32
GABRR3	200959	broad.mit.edu	36	3	99214060	99214060	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	99214060	99214060	GABRR3	3	G	G	A	40
AMBN	258	broad.mit.edu	36	4	71497332	71497332	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	71497332	71497332	AMBN	4	G	G	A	43
AGXT2L1	64850	broad.mit.edu	36	4	109888619	109888619	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	109888619	109888619	AGXT2L1	4	C	C	A	30
NDST1	3340	broad.mit.edu	36	5	149895493	149895493	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	149895493	149895493	NDST1	5	G	G	A	38
KIF4B	285643	broad.mit.edu	36	5	154375434	154375434	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	154375434	154375434	KIF4B	5	C	C	G	29
SYNGAP1	8831	broad.mit.edu	36	6	33519423	33519423	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	33519423	33519423	SYNGAP1	6	T	T	C	52
KCTD20	222658	broad.mit.edu	36	6	36557492	36557492	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	36557492	36557492	KCTD20	6	A	A	T	5
ZNF318	24149	broad.mit.edu	36	6	43433287	43433287	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	43433287	43433287	ZNF318	6	C	C	T	23
FAM83B	222584	broad.mit.edu	36	6	54914497	54914497	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	54914497	54914497	FAM83B	6	T	T	G	62
COL12A1	1303	broad.mit.edu	36	6	75890707	75890707	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	75890707	75890707	COL12A1	6	T	T	C	60
MICALL2	79778	broad.mit.edu	36	7	1454828	1454828	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	1454828	1454828	MICALL2	7	C	C	G	29
WIPI2	26100	broad.mit.edu	36	7	5205797	5205797	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	5205797	5205797	WIPI2	7	G	G	C	41
OGDH	4967	broad.mit.edu	36	7	44704337	44704337	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	44704337	44704337	OGDH	7	C	C	A	23
UNC5D	137970	broad.mit.edu	36	8	35736450	35736450	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	35736450	35736450	UNC5D	8	G	G	T	43
CHMP4C	92421	broad.mit.edu	36	8	82830160	82830160	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	82830160	82830160	CHMP4C	8	G	G	A	43
VPS13B	157680	broad.mit.edu	36	8	100901489	100901489	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	100901489	100901489	VPS13B	8	T	T	A	60
C9orf167	54863	broad.mit.edu	36	9	139292970	139292970	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	139292970	139292970	C9orf167	9	G	G	A	38
CACNA1B	774	broad.mit.edu	36	9	140074012	140074012	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	140074012	140074012	CACNA1B	9	T	T	A	57
CXorf38	159013	broad.mit.edu	36	X	40381332	40381332	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	40381332	40381332	CXorf38	23	C	C	G	32
ZMYM3	9203	broad.mit.edu	36	X	70382597	70382597	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	70382597	70382597	ZMYM3	23	G	G	T	42
POU3F4	5456	broad.mit.edu	36	X	82650625	82650625	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	82650625	82650625	POU3F4	23	G	G	T	42
NAA10	8260	broad.mit.edu	36	X	152848718	152848718	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-25-2404-01	TCGA-25-2404-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	152848718	152848718	NAA10	23	G	G	T	48
