Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCB1	5243	broad.mit.edu	37	7	87151342	87151342	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87151342	87151342	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC6P1	653190	broad.mit.edu	37	16	18602624	18602625	+	Missense_Mutation	DNP	GC	AT	AT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC6P1	653190	broad.mit.edu	37	16	18602624	18602625	+	Missense_Mutation	DNP	GC	AT	AT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116203986	116203986	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116203986	116203986	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70824043	70824043	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70824043	70824043	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20648649	20648649	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20648649	20648649	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20488572	20488572	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20488572	20488572	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG2	72	broad.mit.edu	37	2	74146648	74146648	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG2	72	broad.mit.edu	37	2	74146648	74146648	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN1	87	broad.mit.edu	37	14	69347514	69347514	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN1	87	broad.mit.edu	37	14	69347514	69347514	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAL	161823	broad.mit.edu	37	15	43641346	43641346	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAL	161823	broad.mit.edu	37	15	43641346	43641346	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156849543	156849543	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156849543	156849543	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207460798	207460798	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207460798	207460798	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39634567	39634567	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39694576	39694576	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39634567	39634567	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39694576	39694576	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM32	203102	broad.mit.edu	37	8	39131923	39131923	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM32	203102	broad.mit.edu	37	8	39131923	39131923	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106368605	106368605	+	Splice_Site	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38948862	38948862	+	Silent	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38948862	38948862	+	Silent	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77325493	77325493	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77325493	77325493	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18574457	18574457	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18574457	18574457	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7626142	7626142	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7626142	7626142	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK2	157	broad.mit.edu	37	22	26118377	26118377	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK2	157	broad.mit.edu	37	22	26118377	26118377	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236706518	236706518	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236706518	236706518	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT6	137964	broad.mit.edu	37	8	41471997	41471997	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT6	137964	broad.mit.edu	37	8	41471997	41471997	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84509333	84509334	+	Intron	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84509333	84509334	+	Intron	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105419467	105419467	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105419467	105419467	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129271088	129271088	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129271088	129271088	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK2	204	broad.mit.edu	37	1	33478586	33478587	+	3'UTR	DEL	CA	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP12	9590	broad.mit.edu	37	6	151673210	151673210	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP12	9590	broad.mit.edu	37	6	151673210	151673210	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125831612	125831612	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125831612	125831612	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH8A1	64577	broad.mit.edu	37	6	135239767	135239767	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH8A1	64577	broad.mit.edu	37	6	135239767	135239767	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG12	79087	broad.mit.edu	37	22	50306919	50306919	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG12	79087	broad.mit.edu	37	22	50306919	50306919	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45941139	45941139	+	3'UTR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45941139	45941139	+	3'UTR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202572578	202572578	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202572578	202572578	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1	146861	broad.mit.edu	37	17	33520803	33520803	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190575913	190575913	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190575913	190575913	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34A	284615	broad.mit.edu	37	1	145473875	145473875	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34A	284615	broad.mit.edu	37	1	145473875	145473875	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD52	283373	broad.mit.edu	37	12	56637709	56637709	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26664731	26664731	+	Silent	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26664731	26664731	+	Silent	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29737726	29737726	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29737726	29737726	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2B1	163	broad.mit.edu	37	17	33997940	33997940	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2B1	163	broad.mit.edu	37	17	33997940	33997940	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4E1	23431	broad.mit.edu	37	15	51237242	51237242	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4E1	23431	broad.mit.edu	37	15	51237242	51237242	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21256135	21256135	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21256135	21256135	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC4	346	broad.mit.edu	37	19	45448463	45448463	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC4	346	broad.mit.edu	37	19	45448463	45448463	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL4	80832	broad.mit.edu	37	22	36587606	36587606	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL4	80832	broad.mit.edu	37	22	36587606	36587606	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145763254	145763254	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145763254	145763254	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187823	11187823	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187823	11187823	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP9	64333	broad.mit.edu	37	12	57870448	57870448	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP9	64333	broad.mit.edu	37	12	57870448	57870448	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF15	22899	broad.mit.edu	37	17	8221720	8221720	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF15	22899	broad.mit.edu	37	17	8221720	8221720	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF17	9828	broad.mit.edu	37	11	73071022	73071022	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF17	9828	broad.mit.edu	37	11	73071022	73071022	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23244787	23244787	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23287230	23287230	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23244787	23244787	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23287230	23287230	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31476036	31476036	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31476036	31476036	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	3002590	3002590	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	3002590	3002590	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66347874	66347874	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66347874	66347874	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSI	340075	broad.mit.edu	37	5	149676935	149676935	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSI	340075	broad.mit.edu	37	5	149676935	149676935	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP3	55616	broad.mit.edu	37	1	23759433	23759433	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP3	55616	broad.mit.edu	37	1	23759433	23759433	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB11	140456	broad.mit.edu	37	X	15306059	15306059	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB11	140456	broad.mit.edu	37	X	15306059	15306059	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177142368	177142368	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177142368	177142368	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176915238	176915238	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176915238	176915238	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323602	31323602	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323602	31323602	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124381250	124381250	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124381250	124381250	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG16L1	55054	broad.mit.edu	37	2	234200895	234200895	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG16L1	55054	broad.mit.edu	37	2	234200895	234200895	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108142314	108142314	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138820033	138820033	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138865476	138865476	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138820033	138820033	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138865476	138865476	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90028574	90028574	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90028574	90028574	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5G3	518	broad.mit.edu	37	2	176043042	176043042	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5G3	518	broad.mit.edu	37	2	176043042	176043042	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1796145	1796145	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1796145	1796145	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN3L	92552	broad.mit.edu	37	X	13337046	13337046	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN3L	92552	broad.mit.edu	37	X	13337046	13337046	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11029638	11029638	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11029707	11029707	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11029638	11029638	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11029707	11029707	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69945061	69945061	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69945061	69945061	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56519510	56519510	+	Missense_Mutation	SNP	C	T	T	rs138913160	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56519510	56519510	+	Missense_Mutation	SNP	C	T	T	rs138913160	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60780422	60780424	+	5'UTR	DEL	GGC	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112051770	112051770	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112051770	112051770	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39933626	39933627	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39933626	39933627	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC2	329	broad.mit.edu	37	11	102239138	102239138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC2	329	broad.mit.edu	37	11	102239138	102239138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC8	112401	broad.mit.edu	37	19	53793473	53793473	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC8	112401	broad.mit.edu	37	19	53793473	53793473	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLK	640	broad.mit.edu	37	8	11414294	11414294	+	Silent	SNP	C	T	T	rs139994406	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLK	640	broad.mit.edu	37	8	11414294	11414294	+	Silent	SNP	C	T	T	rs139994406	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140453193	140453193	+	Missense_Mutation	SNP	T	C	C	rs121913370		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140453193	140453193	+	Missense_Mutation	SNP	T	C	C	rs121913370		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36182221	36182221	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36196766	36196766	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36182221	36182221	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36196766	36196766	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49694474	49694474	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49694474	49694474	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD8	284697	broad.mit.edu	37	1	92554451	92554451	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD8	284697	broad.mit.edu	37	1	92554451	92554451	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100608115	100608115	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100608115	100608115	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26393509	26393509	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26393509	26393509	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A3	54718	broad.mit.edu	37	6	26429054	26429054	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A3	54718	broad.mit.edu	37	6	26429054	26429054	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180377609	180377609	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180377609	180377609	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105900796	105900796	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105900796	105900796	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128153569	128153569	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128153569	128153569	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95903289	95903289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95903289	95903289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf21	283651	broad.mit.edu	37	15	45848224	45848224	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36910696	36910696	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36910696	36910696	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100339949	100339949	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100339949	100339949	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf71	55181	broad.mit.edu	37	17	57288024	57288024	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf71	55181	broad.mit.edu	37	17	57288024	57288024	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170955900	170955900	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170955900	170955900	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf144	26099	broad.mit.edu	37	1	16695692	16695692	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60505798	60505798	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60505798	60505798	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32554930	32554930	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32554930	32554930	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf77	129881	broad.mit.edu	37	2	170502572	170502572	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf77	129881	broad.mit.edu	37	2	170502572	170502572	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf89	129293	broad.mit.edu	37	2	85051250	85051250	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf89	129293	broad.mit.edu	37	2	85051250	85051250	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf27	23434	broad.mit.edu	37	3	128292497	128292497	+	Missense_Mutation	SNP	C	T	T	rs141693917		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf27	23434	broad.mit.edu	37	3	128292497	128292497	+	Missense_Mutation	SNP	C	T	T	rs141693917		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf13	9315	broad.mit.edu	37	5	111091358	111091358	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf13	9315	broad.mit.edu	37	5	111091358	111091358	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf24	134553	broad.mit.edu	37	5	134190862	134190862	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf24	134553	broad.mit.edu	37	5	134190862	134190862	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175716950	175716950	+	Silent	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175716950	175716950	+	Silent	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37115015	37115015	+	Intron	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37115015	37115015	+	Intron	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32267550	32267550	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32339549	32339549	+	5'UTR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32339549	32339549	+	5'UTR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf153	88745	broad.mit.edu	37	6	42989269	42989269	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf153	88745	broad.mit.edu	37	6	42989269	42989269	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40979769	40979769	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40979769	40979769	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120782149	120782149	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120782149	120782149	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4625390	4625390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4625413	4625413	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4625390	4625390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4625413	4625413	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf95	54981	broad.mit.edu	37	9	77681845	77681845	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf95	54981	broad.mit.edu	37	9	77681845	77681845	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49710786	49710786	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50149796	50149796	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49710786	49710786	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50149796	50149796	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9018902	9018902	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9018902	9018902	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2714893	2714893	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2714893	2714893	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53752403	53752403	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53752403	53752403	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18807779	18807779	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18807779	18807779	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54106546	54106546	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54106546	54106546	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188216770	188216770	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188216770	188216770	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX6	23466	broad.mit.edu	37	22	39262426	39262426	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX6	23466	broad.mit.edu	37	22	39262426	39262426	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC112	153733	broad.mit.edu	37	5	114607173	114607173	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC112	153733	broad.mit.edu	37	5	114607173	114607173	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC33	80125	broad.mit.edu	37	15	74573106	74573106	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC33	80125	broad.mit.edu	37	15	74573106	74573106	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC40	55036	broad.mit.edu	37	17	78023992	78023992	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC40	55036	broad.mit.edu	37	17	78023992	78023992	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32697247	32697247	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32697247	32697247	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74B	91409	broad.mit.edu	37	2	130900020	130900020	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74B	91409	broad.mit.edu	37	2	130900020	130900020	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86108852	86108852	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86108852	86108852	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL15	6359	broad.mit.edu	37	17	34324712	34324712	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL15	6359	broad.mit.edu	37	17	34324712	34324712	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL4	6351	broad.mit.edu	37	17	34432678	34432678	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL4	6351	broad.mit.edu	37	17	34432678	34432678	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2BP2	10421	broad.mit.edu	37	16	30365803	30365803	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2BP2	10421	broad.mit.edu	37	16	30365803	30365803	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72537606	72537607	+	3'UTR	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72537606	72537607	+	3'UTR	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72527477	72527477	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72527477	72527477	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83158977	83158977	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83158977	83158977	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH16	1014	broad.mit.edu	37	16	66948064	66948064	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH16	1014	broad.mit.edu	37	16	66948064	66948064	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19520859	19520859	+	Silent	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19520859	19520859	+	Silent	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK1	983	broad.mit.edu	37	10	62545585	62545585	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK1	983	broad.mit.edu	37	10	62545585	62545585	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123156773	123156773	+	Intron	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123156773	123156773	+	Intron	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF3	11189	broad.mit.edu	37	1	151681891	151681891	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF3	11189	broad.mit.edu	37	1	151681891	151681891	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34850768	34850768	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34850768	34850768	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214782026	214782026	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117263457	117263458	+	Intron	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117263457	117263458	+	Intron	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87795867	87795867	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87795867	87795867	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD4	131474	broad.mit.edu	37	3	14163326	14163326	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD4	131474	broad.mit.edu	37	3	14163326	14163326	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125497573	125497573	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125497573	125497573	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111773424	111773424	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111773424	111773424	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	418224	418224	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	418224	418224	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78923767	78923767	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78923767	78923767	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST4	10164	broad.mit.edu	37	16	71570875	71570875	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST4	10164	broad.mit.edu	37	16	71570875	71570875	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN3	1182	broad.mit.edu	37	4	170627967	170627967	+	Intron	SNP	G	C	C	rs139541306	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN3	1182	broad.mit.edu	37	4	170627967	170627967	+	Intron	SNP	G	C	C	rs139541306	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1A	51267	broad.mit.edu	37	12	10241744	10241744	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1A	51267	broad.mit.edu	37	12	10241744	10241744	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6260974	6260974	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6260974	6260974	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT3	4849	broad.mit.edu	37	19	54647235	54647235	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT3	4849	broad.mit.edu	37	19	54647235	54647235	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76573585	76573585	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76573585	76573585	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125232346	125232346	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125232346	125232346	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7839674	7839674	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7839674	7839674	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103355036	103355036	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103467330	103467330	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103355036	103355036	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103467330	103467330	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121381596	121381596	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121381596	121381596	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94044451	94044451	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94044451	94044451	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL20A1	57642	broad.mit.edu	37	20	61956760	61956760	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL20A1	57642	broad.mit.edu	37	20	61956760	61956760	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139788154	139788154	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139788154	139788154	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189859522	189859522	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189873907	189873907	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189859522	189859522	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189873907	189873907	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227979203	227979203	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107464300	107464300	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107464300	107464300	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137716415	137716415	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137716415	137716415	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47532527	47532527	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47532527	47532527	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70970395	70970395	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70970395	70970395	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211441261	211441261	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211513216	211513216	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211441261	211441261	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211513216	211513216	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008572	88008572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008572	88008572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125557403	125557403	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739133	207739133	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739136	207739136	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739213	207739213	+	Silent	SNP	T	C	C	rs56229517		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739133	207739133	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739136	207739136	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739213	207739213	+	Silent	SNP	T	C	C	rs56229517		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159684154	159684154	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159684154	159684154	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3076867	3076867	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3265539	3265539	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4646135	4646135	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3076867	3076867	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3265539	3265539	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4646135	4646135	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	33987216	33987216	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	33987216	33987216	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114186001	114186001	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114186001	114186001	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP2	81566	broad.mit.edu	37	12	51458343	51458343	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP2	81566	broad.mit.edu	37	12	51458343	51458343	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST1	1469	broad.mit.edu	37	20	23731257	23731257	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAG2	30848	broad.mit.edu	37	X	153880408	153880408	+	3'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAG2	30848	broad.mit.edu	37	X	153880408	153880408	+	3'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11397038	11397038	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11397038	11397038	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16932533	16932533	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16932533	16932533	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44876391	44876391	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44876391	44876391	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf56	63932	broad.mit.edu	37	X	118675326	118675326	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf56	63932	broad.mit.edu	37	X	118675326	118675326	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37655268	37655268	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37655268	37655268	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74654222	74654222	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74654222	74654222	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP8B1	1582	broad.mit.edu	37	3	42916116	42916116	+	Missense_Mutation	SNP	G	T	T	rs141302264		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYR61	3491	broad.mit.edu	37	1	86047525	86047525	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYR61	3491	broad.mit.edu	37	1	86047525	86047525	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27945291	27945291	+	5'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27945291	27945291	+	5'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72256078	72256078	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72256078	72256078	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85416112	85416112	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85416112	85416112	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAOA	267012	broad.mit.edu	37	13	106142120	106142120	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBNL	28988	broad.mit.edu	37	7	44096269	44096269	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBNL	28988	broad.mit.edu	37	7	44096269	44096269	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50929287	50929287	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50929287	50929287	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCN	1634	broad.mit.edu	37	12	91539800	91539800	+	3'UTR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCN	1634	broad.mit.edu	37	12	91539800	91539800	+	3'UTR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCP1B	196513	broad.mit.edu	37	12	2062350	2062350	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50544321	50544321	+	Splice_Site	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50544321	50544321	+	Splice_Site	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX55	57696	broad.mit.edu	37	12	124102348	124102348	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX55	57696	broad.mit.edu	37	12	124102348	124102348	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19352253	19352253	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19352253	19352253	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31633191	31633191	+	Splice_Site	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31633191	31633191	+	Splice_Site	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32232953	32232953	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32232953	32232953	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137406757	137406757	+	Intron	SNP	C	T	T	rs77130065		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137406757	137406757	+	Intron	SNP	C	T	T	rs77130065		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS4	10901	broad.mit.edu	37	14	24435560	24435560	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS4	10901	broad.mit.edu	37	14	24435560	24435560	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125453084	125453084	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125453084	125453084	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41571108	41571108	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41571108	41571108	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61525033	61525033	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61528277	61528277	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61525033	61525033	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61528277	61528277	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80668677	80668677	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80668677	80668677	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK1	22943	broad.mit.edu	37	10	54074087	54074087	+	5'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK1	22943	broad.mit.edu	37	10	54074087	54074087	+	5'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101200835	101200835	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101200835	101200835	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32456306	32456306	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32456306	32456306	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124322985	124322985	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124362333	124362333	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124322985	124322985	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124362333	124362333	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52406111	52406111	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52406111	52406111	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13864666	13864666	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13864666	13864666	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38905924	38905924	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38905924	38905924	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11592912	11592912	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11592912	11592912	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	405014	405015	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX2	113878	broad.mit.edu	37	7	76112318	76112318	+	Silent	SNP	G	T	T	rs146537218	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX2	113878	broad.mit.edu	37	7	76112318	76112318	+	Silent	SNP	G	T	T	rs146537218	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP9	1852	broad.mit.edu	37	X	152915427	152915427	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP9	1852	broad.mit.edu	37	X	152915427	152915427	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL3	1857	broad.mit.edu	37	3	183885372	183885372	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL3	1857	broad.mit.edu	37	3	183885372	183885372	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62120253	62120253	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62120253	62120253	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13624574	13624574	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13624574	13624574	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38435117	38435117	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38435117	38435117	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD3	30845	broad.mit.edu	37	2	31472324	31472324	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD3	30845	broad.mit.edu	37	2	31472324	31472324	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E1B	253314	broad.mit.edu	37	5	176070283	176070283	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E1B	253314	broad.mit.edu	37	5	176070283	176070283	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL2	54898	broad.mit.edu	37	6	10995243	10995243	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL2	54898	broad.mit.edu	37	6	10995243	10995243	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22920043	22920043	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22920043	22920043	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134959962	134959962	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134959962	134959962	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16552855	16552855	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC2	2068	broad.mit.edu	37	19	45873524	45873524	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC2	2068	broad.mit.edu	37	19	45873524	45873524	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76967021	76967021	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76967021	76967021	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216741278	216741278	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216741278	216741278	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVL	51466	broad.mit.edu	37	14	100604129	100604129	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVL	51466	broad.mit.edu	37	14	100604129	100604129	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EWSR1	2130	broad.mit.edu	37	22	29664333	29664333	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EWSR1	2130	broad.mit.edu	37	22	29664333	29664333	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44219263	44219263	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44219263	44219263	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72246386	72246386	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72246386	72246386	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45633640	45633640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45633640	45633640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148525874	148525874	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148525874	148525874	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6152180	6152180	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6152180	6152180	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169510755	169510755	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169510755	169510755	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM113A	64773	broad.mit.edu	37	20	2815990	2815990	+	3'UTR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120C	54954	broad.mit.edu	37	X	54160573	54160573	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120C	54954	broad.mit.edu	37	X	54160573	54160573	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63410828	63410828	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63410828	63410828	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM127C	441518	broad.mit.edu	37	X	134156562	134156562	+	5'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM127C	441518	broad.mit.edu	37	X	134156562	134156562	+	5'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM177A1	283635	broad.mit.edu	37	14	35515607	35515608	+	Intron	DEL	GG	-	-	rs112060457		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2661632	2661632	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2661632	2661632	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150421307	150421307	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150421307	150421307	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45A	404636	broad.mit.edu	37	10	120877099	120877099	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45A	404636	broad.mit.edu	37	10	120877099	120877099	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46D	169966	broad.mit.edu	37	X	79699123	79699123	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46D	169966	broad.mit.edu	37	X	79699123	79699123	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34148514	34148514	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34148514	34148514	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24331745	24331745	+	5'Flank	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24331745	24331745	+	5'Flank	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55C	91775	broad.mit.edu	37	3	101520396	101520396	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55C	91775	broad.mit.edu	37	3	101520396	101520396	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM58A	92002	broad.mit.edu	37	X	152864383	152864383	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM58A	92002	broad.mit.edu	37	X	152864383	152864383	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190068080	190068080	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190068080	190068080	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131825723	131825723	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131825723	131825723	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83G	644815	broad.mit.edu	37	17	18907267	18907267	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83G	644815	broad.mit.edu	37	17	18907267	18907267	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCB	2187	broad.mit.edu	37	X	14882911	14882911	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCB	2187	broad.mit.edu	37	X	14882911	14882911	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10081090	10081090	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10081090	10081090	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45639873	45639873	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45639873	45639873	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29423295	29423295	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29423295	29423295	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126370833	126370833	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126370833	126370833	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45937981	45937981	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45959084	45959085	+	Intron	DEL	CG	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45937981	45937981	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45959084	45959085	+	Intron	DEL	CG	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127599408	127599408	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127664436	127664436	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127666379	127666379	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127599408	127599408	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127664436	127664436	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127666379	127666379	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102517943	102517943	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102517943	102517943	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO38	81545	broad.mit.edu	37	5	147784396	147784396	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO38	81545	broad.mit.edu	37	5	147784396	147784396	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW12	285231	broad.mit.edu	37	3	48416855	48416855	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW12	285231	broad.mit.edu	37	3	48416855	48416855	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40395895	40395895	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40395895	40395895	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157659522	157659522	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157659522	157659522	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FFAR2	2867	broad.mit.edu	37	19	35941665	35941665	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FFAR2	2867	broad.mit.edu	37	19	35941665	35941665	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155490895	155490895	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155490895	155490895	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD1	2245	broad.mit.edu	37	X	54497808	54497808	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD1	2245	broad.mit.edu	37	X	54497808	54497808	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38291846	38291847	+	Intron	DEL	GC	-	-	rs57213852		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283761	152283761	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40504	284085	broad.mit.edu	37	17	26633083	26633083	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40504	284085	broad.mit.edu	37	17	26633083	26633083	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84531794	84531794	+	3'UTR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84531794	84531794	+	3'UTR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58135961	58135961	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58135961	58135961	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28636349	28636349	+	Intron	SNP	G	T	T	rs138419807	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240308011	240308012	+	Intron	INS	-	ATCA	ATCA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240308011	240308012	+	Intron	INS	-	ATCA	ATCA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49175441	49175441	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49175441	49175441	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ2	55810	broad.mit.edu	37	12	8201260	8201260	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ2	55810	broad.mit.edu	37	12	8201260	8201260	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP4	116113	broad.mit.edu	37	6	41533765	41533765	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP4	116113	broad.mit.edu	37	6	41533765	41533765	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135438794	135438794	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135438794	135438794	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13838315	13838315	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52178252	52178252	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52182275	52182275	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52178252	52178252	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52182275	52182275	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131212510	131212510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131212510	131212510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32706107	32706107	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32706107	32706107	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44975985	44975985	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44975985	44975985	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162380417	162380417	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162380417	162380417	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTMT	94033	broad.mit.edu	37	5	121187648	121187648	+	5'Flank	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTMT	94033	broad.mit.edu	37	5	121187648	121187648	+	5'Flank	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUZ	80199	broad.mit.edu	37	19	50314895	50314895	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUZ	80199	broad.mit.edu	37	19	50314895	50314895	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151138890	151138890	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151138890	151138890	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	898293	898293	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16268973	16268973	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16268973	16268973	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	172735945	172735945	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	172735945	172735945	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARS	2617	broad.mit.edu	37	7	30661854	30661854	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARS	2617	broad.mit.edu	37	7	30661854	30661854	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22729405	22729405	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22729405	22729405	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44228635	44228635	+	5'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44228635	44228635	+	5'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM1	85476	broad.mit.edu	37	3	158376808	158376808	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM1	85476	broad.mit.edu	37	3	158376808	158376808	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGCX	2677	broad.mit.edu	37	2	85781595	85781595	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8095229	8095229	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8095229	8095229	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39047364	39047364	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39047364	39047364	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14548166	14548166	+	5'UTR	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14548166	14548166	+	5'UTR	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133389914	133389914	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133389914	133389914	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAT2	150763	broad.mit.edu	37	2	96687911	96687911	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAT2	150763	broad.mit.edu	37	2	96687911	96687911	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHB5	122876	broad.mit.edu	37	14	63784422	63784422	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHB5	122876	broad.mit.edu	37	14	63784422	63784422	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR124	25960	broad.mit.edu	37	8	37690447	37690447	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR124	25960	broad.mit.edu	37	8	37690447	37690447	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR142	350383	broad.mit.edu	37	17	72368403	72368403	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR142	350383	broad.mit.edu	37	17	72368403	72368403	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR18	2841	broad.mit.edu	37	13	99908075	99908075	+	Missense_Mutation	SNP	G	T	T	rs138394107		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR18	2841	broad.mit.edu	37	13	99908075	99908075	+	Missense_Mutation	SNP	G	T	T	rs138394107		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150349618	150349618	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19027777	19027777	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19027777	19027777	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90050833	90050833	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90050833	90050833	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117130516	117130516	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117130516	117130516	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11732998	11732998	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11758308	11758308	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11732998	11732998	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11758308	11758308	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	10031860	10031860	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	10031860	10031860	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66786619	66786619	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66911599	66911599	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66786619	66786619	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66911599	66911599	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1L	146395	broad.mit.edu	37	16	27818859	27818859	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1L	146395	broad.mit.edu	37	16	27818859	27818859	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSS	2937	broad.mit.edu	37	20	33539721	33539721	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSS	2937	broad.mit.edu	37	20	33539721	33539721	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108708604	108708604	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108708604	108708604	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS3	79441	broad.mit.edu	37	4	2238091	2238091	+	Missense_Mutation	SNP	T	C	C	rs150101454		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS3	79441	broad.mit.edu	37	4	2238091	2238091	+	Missense_Mutation	SNP	T	C	C	rs150101454		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS7	55559	broad.mit.edu	37	X	152720441	152720441	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153219071	153219071	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153219071	153219071	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55113436	55113436	+	Splice_Site	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55113436	55113436	+	Splice_Site	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCST	10870	broad.mit.edu	37	19	36394175	36394175	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCST	10870	broad.mit.edu	37	19	36394175	36394175	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236729099	236729099	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236729099	236729099	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELB	92797	broad.mit.edu	37	12	66718995	66718995	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELB	92797	broad.mit.edu	37	12	66718995	66718995	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELLS	3070	broad.mit.edu	37	10	96333850	96333850	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELLS	3070	broad.mit.edu	37	10	96333850	96333850	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65411935	65411935	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65411935	65411935	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28493667	28493667	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28493667	28493667	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81336685	81336685	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81336685	81336685	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGSNAT	138050	broad.mit.edu	37	8	43002071	43002071	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97203236	97203236	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97203236	97203236	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139416353	139416353	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK3	10114	broad.mit.edu	37	11	33369722	33369722	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK3	10114	broad.mit.edu	37	11	33369722	33369722	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71010090	71010090	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71010090	71010090	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DRB5	3127	broad.mit.edu	37	6	32497857	32497858	+	Intron	INS	-	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-G	3135	broad.mit.edu	37	6	29858175	29858175	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55381282	55381282	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55381282	55381282	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44284644	44284644	+	3'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44284644	44284644	+	3'UTR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62490080	62490080	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62490080	62490080	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK3	84376	broad.mit.edu	37	8	42823213	42823213	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK3	84376	broad.mit.edu	37	8	42823213	42823213	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPD	3242	broad.mit.edu	37	12	122287013	122287013	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPD	3242	broad.mit.edu	37	12	122287013	122287013	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST2	90161	broad.mit.edu	37	X	131803196	131803196	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST2	90161	broad.mit.edu	37	X	131803196	131803196	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB7	27129	broad.mit.edu	37	1	16342123	16342123	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB7	27129	broad.mit.edu	37	1	16342123	16342123	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTA	283902	broad.mit.edu	37	16	73126680	73126680	+	RNA	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTA	283902	broad.mit.edu	37	16	73126680	73126680	+	RNA	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47466725	47466725	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47466725	47466725	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70977730	70977730	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71220652	71220652	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70977730	70977730	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71220652	71220652	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA7	3444	broad.mit.edu	37	9	21202041	21202041	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA7	3444	broad.mit.edu	37	9	21202041	21202041	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47109377	47109377	+	Intron	SNP	G	A	A	rs34685424		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47109377	47109377	+	Intron	SNP	G	A	A	rs34685424		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201197371	201197371	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201197371	201197371	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151176498	151176499	+	Splice_Site	DNP	CC	AT	AT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151176498	151176499	+	Splice_Site	DNP	CC	AT	AT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18745745	18745745	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18745745	18745745	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114250134	114250134	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114250134	114250134	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17B	27190	broad.mit.edu	37	5	148753957	148753957	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17B	27190	broad.mit.edu	37	5	148753957	148753957	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29938182	29938182	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29938182	29938182	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL23R	149233	broad.mit.edu	37	1	67724025	67724027	+	Intron	TNP	TGG	ATT	ATT	rs11465826		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL23R	149233	broad.mit.edu	37	1	67724026	67724027	+	Intron	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6067872	6067872	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6067872	6067872	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154422457	154422457	+	Splice_Site	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154422457	154422457	+	Splice_Site	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62626589	62626589	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62626589	62626589	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41730102	41730103	+	Missense_Mutation	DNP	CC	TA	TA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41730102	41730103	+	Missense_Mutation	DNP	CC	TA	TA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30793517	30793517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30793517	30793517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS12	57117	broad.mit.edu	37	4	106614705	106614705	+	Intron	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS12	57117	broad.mit.edu	37	4	106614705	106614705	+	Intron	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K3	117283	broad.mit.edu	37	6	33690860	33690860	+	Silent	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K3	117283	broad.mit.edu	37	6	33690860	33690860	+	Silent	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9438673	9438673	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9456435	9456435	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9438673	9438673	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9456435	9456435	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977841	107977841	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977841	107977841	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISLR2	57611	broad.mit.edu	37	15	74425705	74425705	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISLR2	57611	broad.mit.edu	37	15	74425705	74425705	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182390004	182390004	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182390004	182390004	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124567122	124567123	+	Intron	INS	-	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124567122	124567123	+	Intron	INS	-	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH3	3699	broad.mit.edu	37	3	52836635	52836635	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH3	3699	broad.mit.edu	37	3	52836635	52836635	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54815108	54815108	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54815108	54815108	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24535030	24535030	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24535030	24535030	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42815287	42815288	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42815287	42815288	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUN	3725	broad.mit.edu	37	1	59247873	59247873	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUN	3725	broad.mit.edu	37	1	59247873	59247873	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39740415	39740415	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39740415	39740415	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150644045	150644045	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150644045	150644045	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63447817	63447817	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63447817	63447817	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78846406	78846406	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78846406	78846406	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN4	3783	broad.mit.edu	37	19	44285050	44285050	+	5'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN4	3783	broad.mit.edu	37	19	44285050	44285050	+	5'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138677118	138677118	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138677118	138677118	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	121987610	121987611	+	Intron	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	121987610	121987611	+	Intron	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6734917	6734917	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6734917	6734917	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0125	9834	broad.mit.edu	37	14	106368455	106368455	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123239240	123239240	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123239240	123239240	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118220782	118220782	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118220782	118220782	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1530	57654	broad.mit.edu	37	4	1343559	1343559	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1530	57654	broad.mit.edu	37	4	1343559	1343559	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1712	80817	broad.mit.edu	37	4	175237375	175237375	+	Silent	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1712	80817	broad.mit.edu	37	4	175237375	175237375	+	Silent	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20946798	20946798	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20946798	20946798	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1804	84451	broad.mit.edu	37	1	233512327	233512327	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1804	84451	broad.mit.edu	37	1	233512327	233512327	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5920027	5920027	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5920648	5920648	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5920027	5920027	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5920648	5920648	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44867888	44867888	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44867888	44867888	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16352333	16352333	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16352333	16352333	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901012	51901012	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901012	51901012	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149840154	149840154	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149840154	149840154	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21675721	21675721	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21675721	21675721	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52886334	52886334	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52886334	52886334	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52827436	52827436	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52827436	52827436	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53166448	53166448	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53166448	53166448	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31812741	31812741	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31812741	31812741	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129480208	129480208	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129480208	129480208	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112465910	112465910	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112465910	112465910	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAP3	51056	broad.mit.edu	37	4	17597144	17597144	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM5	7805	broad.mit.edu	37	1	31230519	31230519	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM5	7805	broad.mit.edu	37	1	31230519	31230519	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21557438	21557438	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21557438	21557438	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5	167691	broad.mit.edu	37	6	80198966	80198966	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5	167691	broad.mit.edu	37	6	80198966	80198966	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2C	353140	broad.mit.edu	37	1	152648743	152648743	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2C	353140	broad.mit.edu	37	1	152648743	152648743	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHD	197257	broad.mit.edu	37	16	75147632	75147632	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHD	197257	broad.mit.edu	37	16	75147632	75147632	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LECT1	11061	broad.mit.edu	37	13	53286963	53286963	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LECT1	11061	broad.mit.edu	37	13	53286963	53286963	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LECT2	3950	broad.mit.edu	37	5	135288387	135288387	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LECT2	3950	broad.mit.edu	37	5	135288387	135288387	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINS1	55180	broad.mit.edu	37	15	101114229	101114229	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINS1	55180	broad.mit.edu	37	15	101114229	101114229	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15561488	15561488	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15561488	15561488	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73559406	73559406	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73559406	73559406	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97822738	97822738	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97822738	97822738	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132200298	132200299	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132200298	132200299	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC642587	642587	broad.mit.edu	37	1	209603726	209603726	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC642587	642587	broad.mit.edu	37	1	209603726	209603726	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15322340	15322340	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15322340	15322340	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645752	645752	broad.mit.edu	37	15	78208164	78208164	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645752	645752	broad.mit.edu	37	15	78208164	78208164	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298066	22298066	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298066	22298066	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23199281	23199281	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23199281	23199281	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF2	164832	broad.mit.edu	37	2	100903581	100903581	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF2	164832	broad.mit.edu	37	2	100903581	100903581	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118108865	118108865	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118148118	118148118	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118108865	118108865	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118148118	118148118	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82407743	82407743	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82432281	82432281	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82407743	82407743	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82432281	82432281	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670176	155670176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670176	155670176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151789409	151789409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151789409	151789409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151835258	151835258	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42355863	42355863	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42355863	42355863	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141093256	141093256	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141093256	141093256	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12311984	12311984	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12311984	12311984	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194080594	194080594	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194080594	194080594	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76372209	76372209	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76372209	76372209	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A	9884	broad.mit.edu	37	17	44408380	44408380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A	9884	broad.mit.edu	37	17	44408380	44408380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30354889	30354889	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30354889	30354889	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52860731	52860731	+	Silent	SNP	C	A	A	rs137931708	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52860731	52860731	+	Silent	SNP	C	A	A	rs137931708	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21343151	21343151	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21343151	21343151	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47333429	47333429	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47333429	47333429	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA4	4103	broad.mit.edu	37	X	151092221	151092221	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA4	4103	broad.mit.edu	37	X	151092221	151092221	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA8	4107	broad.mit.edu	37	X	149013289	149013289	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA8	4107	broad.mit.edu	37	X	149013289	149013289	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB18	286514	broad.mit.edu	37	X	26157298	26157298	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB18	286514	broad.mit.edu	37	X	26157298	26157298	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB2	4113	broad.mit.edu	37	X	30237292	30237292	+	Missense_Mutation	SNP	C	A	A	rs45513291		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB2	4113	broad.mit.edu	37	X	30237292	30237292	+	Missense_Mutation	SNP	C	A	A	rs45513291		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAMDC4	158056	broad.mit.edu	37	9	139748411	139748411	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAMDC4	158056	broad.mit.edu	37	9	139748411	139748411	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21207679	21207679	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21207679	21207679	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP1	9479	broad.mit.edu	37	11	45924235	45924235	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP1	9479	broad.mit.edu	37	11	45924235	45924235	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119748250	119748250	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119748250	119748250	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT1	154141	broad.mit.edu	37	6	20152873	20152873	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT1	154141	broad.mit.edu	37	6	20152873	20152873	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100369158	100369158	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100369158	100369158	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM8	84515	broad.mit.edu	37	20	5958578	5958578	+	Silent	SNP	C	T	T	rs113442872	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM8	84515	broad.mit.edu	37	20	5958578	5958578	+	Silent	SNP	C	T	T	rs113442872	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94945072	94945072	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94945072	94945072	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1B	130752	broad.mit.edu	37	2	207630019	207630019	+	5'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1B	130752	broad.mit.edu	37	2	207630019	207630019	+	5'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90428642	90428642	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90428642	90428642	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED15	51586	broad.mit.edu	37	22	20922826	20922826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED15	51586	broad.mit.edu	37	22	20922826	20922826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX1	4222	broad.mit.edu	37	17	41738726	41738726	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX1	4222	broad.mit.edu	37	17	41738726	41738726	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL8	79828	broad.mit.edu	37	2	172195573	172195573	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL8	79828	broad.mit.edu	37	2	172195573	172195573	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFF	56947	broad.mit.edu	37	2	228205013	228205013	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFF	56947	broad.mit.edu	37	2	228205013	228205013	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD9	84804	broad.mit.edu	37	2	103353273	103353273	+	5'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD9	84804	broad.mit.edu	37	2	103353273	103353273	+	5'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129914362	129914362	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129914362	129914362	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2524404	2524404	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2524404	2524404	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSPD2	158747	broad.mit.edu	37	X	14915215	14915215	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSPD2	158747	broad.mit.edu	37	X	14915215	14915215	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132645261	132645261	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132645261	132645261	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED1	758	broad.mit.edu	37	22	43821177	43821177	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED1	758	broad.mit.edu	37	22	43821177	43821177	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSN	4478	broad.mit.edu	37	X	64956849	64956849	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSN	4478	broad.mit.edu	37	X	64956849	64956849	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1H	4496	broad.mit.edu	37	16	56704907	56704907	+	3'UTR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1H	4496	broad.mit.edu	37	16	56704907	56704907	+	3'UTR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9061138	9061138	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9074617	9074617	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9061138	9061138	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9074617	9074617	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48459602	48459602	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48459602	48459602	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15851756	15851756	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15851756	15851756	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10443964	10443964	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10443964	10443964	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23861701	23861701	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23861701	23861701	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10296216	10296216	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10296216	10296216	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK2	85366	broad.mit.edu	37	20	30421684	30421684	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16672820	16672820	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16672820	16672820	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16701144	16701144	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26166186	26166186	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26166186	26166186	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128346154	128346154	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128346154	128346154	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95066741	95066741	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95126285	95126285	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95066741	95066741	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95126285	95126285	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69882109	69882109	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69882109	69882109	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA10	8260	broad.mit.edu	37	X	153197425	153197425	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA10	8260	broad.mit.edu	37	X	153197425	153197425	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89892318	89892318	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89892318	89892318	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102047695	102047695	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102047695	102047695	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201749427	201749427	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201749427	201749427	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19735466	19735466	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19735466	19735466	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78444565	78444565	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78534247	78534247	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78444565	78444565	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78534247	78534247	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL2	23218	broad.mit.edu	37	3	47038686	47038686	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL2	23218	broad.mit.edu	37	3	47038945	47038945	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL2	23218	broad.mit.edu	37	3	47038945	47038945	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF15	284565	broad.mit.edu	37	1	148594232	148594232	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF15	284565	broad.mit.edu	37	1	148594232	148594232	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134051057	134051057	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134051057	134051057	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54905707	54905707	+	Intron	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54905707	54905707	+	Intron	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG1	10397	broad.mit.edu	37	8	134274543	134274543	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG1	10397	broad.mit.edu	37	8	134274543	134274543	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119115342	119115342	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119115342	119115342	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152487674	152487674	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152487674	152487674	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEFL	4747	broad.mit.edu	37	8	24811218	24811218	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEFL	4747	broad.mit.edu	37	8	24811218	24811218	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821398	5821398	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821398	5821398	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7981773	7981773	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7981773	7981773	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54310879	54310879	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54310879	54310879	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56477416	56477416	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56477416	56477416	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTUM	147111	broad.mit.edu	37	17	79910771	79910771	+	3'UTR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	27064784	27064784	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	27064784	27064784	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89106502	89106502	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89106502	89106502	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR2	2832	broad.mit.edu	37	20	62737418	62737418	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR2	2832	broad.mit.edu	37	20	62737418	62737418	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36340098	36340098	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36340098	36340098	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN2	80023	broad.mit.edu	37	20	333742	333742	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN2	80023	broad.mit.edu	37	20	333742	333742	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50724419	50724419	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50724419	50724419	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603979	5603979	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603979	5603979	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13417095	13417095	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13417095	13417095	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56867362	56867362	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56867362	56867362	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102332779	102332779	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102332779	102332779	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS1	4938	broad.mit.edu	37	12	113355323	113355323	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS1	4938	broad.mit.edu	37	12	113355323	113355323	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228463741	228463741	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220422763	220422763	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220422763	220422763	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133046998	133046998	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133046998	133046998	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123839006	123839006	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	124028304	124028304	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123839006	123839006	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	124028304	124028304	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78387379	78387379	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78437093	78437093	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78387379	78387379	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78437093	78437093	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMG	4974	broad.mit.edu	37	17	29622582	29622582	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMG	4974	broad.mit.edu	37	17	29622582	29622582	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67290385	67290385	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67290385	67290385	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRK1	4986	broad.mit.edu	37	8	54142028	54142028	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRK1	4986	broad.mit.edu	37	8	54142028	54142028	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1A1	8383	broad.mit.edu	37	17	3119679	3119679	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1F1	4992	broad.mit.edu	37	16	3255074	3255074	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1F1	4992	broad.mit.edu	37	16	3255074	3255074	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B2	81697	broad.mit.edu	37	6	27879562	27879562	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B2	81697	broad.mit.edu	37	6	27879562	27879562	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248486947	248486947	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487446	248487446	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248486947	248486947	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487446	248487446	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A47	403253	broad.mit.edu	37	11	48510784	48510785	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A47	403253	broad.mit.edu	37	11	48510784	48510785	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M1	441670	broad.mit.edu	37	14	20248962	20248962	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M1	441670	broad.mit.edu	37	14	20248962	20248962	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E2	81285	broad.mit.edu	37	11	4703764	4703764	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E2	81285	broad.mit.edu	37	11	4703764	4703764	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579627	55579627	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579627	55579627	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORAI2	80228	broad.mit.edu	37	7	102079390	102079390	+	Splice_Site	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORAI2	80228	broad.mit.edu	37	7	102079390	102079390	+	Splice_Site	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52850704	52850704	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52850704	52850704	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24854888	24854888	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24854888	24854888	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90690795	90690795	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90690795	90690795	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135203244	135203244	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135203244	135203244	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39592064	39592064	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39592064	39592064	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176661496	176661496	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176661496	176661496	+	Intron	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118997534	118997534	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118997534	118997534	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50124151	50124151	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50124151	50124151	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91714745	91714745	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91714745	91714745	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138453002	138453002	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138453002	138453002	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553068	140553068	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553068	140553068	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140744069	140744069	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140744069	140744069	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47783460	47783460	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47783460	47783460	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394270	233394270	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394270	233394270	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142567310	142567310	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142567310	142567310	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78794640	78794640	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78794640	78794640	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PC	5091	broad.mit.edu	37	11	66631269	66631269	+	Silent	SNP	C	A	A	rs148281644	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PC	5091	broad.mit.edu	37	11	66631269	66631269	+	Silent	SNP	C	A	A	rs148281644	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6	10016	broad.mit.edu	37	5	290247	290247	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6	10016	broad.mit.edu	37	5	290247	290247	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178862859	178862859	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178862859	178862859	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	647771	647771	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	647771	647771	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54249936	54249936	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54249936	54249936	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK2	5164	broad.mit.edu	37	17	48186587	48186587	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK4	5166	broad.mit.edu	37	7	95216781	95216781	+	Silent	SNP	T	C	C	rs148379762		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK4	5166	broad.mit.edu	37	7	95216781	95216781	+	Silent	SNP	T	C	C	rs148379762		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPR	55066	broad.mit.edu	37	16	70190519	70190519	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXK	8566	broad.mit.edu	37	21	45175689	45175689	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXK	8566	broad.mit.edu	37	21	45175689	45175689	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF13	148479	broad.mit.edu	37	1	6680330	6680331	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF13	148479	broad.mit.edu	37	1	6680330	6680331	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF17	79960	broad.mit.edu	37	4	129753160	129753160	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60642601	60642601	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60642601	60642601	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI16	221476	broad.mit.edu	37	6	36930861	36930861	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI16	221476	broad.mit.edu	37	6	36930861	36930861	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21178643	21178643	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21178643	21178643	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209142361	209142361	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209142361	209142361	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71532398	71532398	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71532398	71532398	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32955525	32955525	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32955525	32955525	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAUR	5329	broad.mit.edu	37	19	44159543	44159543	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAUR	5329	broad.mit.edu	37	19	44159543	44159543	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB2	5330	broad.mit.edu	37	15	40586546	40586546	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB2	5330	broad.mit.edu	37	15	40586546	40586546	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9374320	9374320	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9438112	9438112	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9374320	9374320	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9438112	9438112	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96014518	96014518	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96014518	96014518	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132066592	132066592	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132066592	132066592	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153694526	153694526	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153694526	153694526	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74290415	74290415	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74290415	74290415	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160222274	160222274	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160222274	160222274	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODN	127435	broad.mit.edu	37	1	53542969	53542969	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODN	127435	broad.mit.edu	37	1	53542969	53542969	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103500	53103500	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103500	53103500	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMGNT1	55624	broad.mit.edu	37	1	46658395	46658395	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMGNT1	55624	broad.mit.edu	37	1	46658395	46658395	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124475445	124475445	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124503323	124503323	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124475445	124475445	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124503323	124503323	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4940293	4940293	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4940293	4940293	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT2	9374	broad.mit.edu	37	6	32130594	32130594	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT2	9374	broad.mit.edu	37	6	32130594	32130594	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64872631	64872631	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64872631	64872631	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12888678	12888678	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12888678	12888678	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF6	440561	broad.mit.edu	37	1	13001343	13001343	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC1	5700	broad.mit.edu	37	14	90731337	90731337	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC1	5700	broad.mit.edu	37	14	90731337	90731337	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71328207	71328207	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71328207	71328207	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPLAD1	51495	broad.mit.edu	37	15	65847232	65847232	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPLAD1	51495	broad.mit.edu	37	15	65847232	65847232	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70948941	70948941	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70948941	70948941	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128562422	128562422	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128562422	128562422	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157369309	157369309	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157959945	157959945	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157369309	157369309	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157959945	157959945	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15668394	15668394	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15668394	15668394	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41306576	41306576	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41306576	41306576	+	Silent	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220406195	220406195	+	Silent	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220406195	220406195	+	Silent	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5C	5878	broad.mit.edu	37	17	40280425	40280425	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5C	5878	broad.mit.edu	37	17	40280425	40280425	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36598045	36598045	+	3'UTR	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36598045	36598045	+	3'UTR	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109383771	109383771	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109383771	109383771	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80409319	80409319	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80409319	80409319	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAVER1	125950	broad.mit.edu	37	19	10444193	10444193	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAVER1	125950	broad.mit.edu	37	19	10444193	10444193	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1CC1	9821	broad.mit.edu	37	8	53580824	53580824	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1CC1	9821	broad.mit.edu	37	8	53580824	53580824	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCAN3	11123	broad.mit.edu	37	1	24840900	24840900	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCAN3	11123	broad.mit.edu	37	1	24840900	24840900	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49076038	49076038	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49076038	49076038	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73657631	73657631	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73657631	73657631	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO1L1	254958	broad.mit.edu	37	8	86840922	86840922	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO1L1	254958	broad.mit.edu	37	8	86840922	86840922	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN2	85415	broad.mit.edu	37	19	33517251	33517251	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN2	85415	broad.mit.edu	37	19	33517251	33517251	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130921572	130921572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130921572	130921572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK1	83732	broad.mit.edu	37	6	7414582	7414582	+	Missense_Mutation	SNP	C	A	A	rs56090491	byFrequency;by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK1	83732	broad.mit.edu	37	6	7414582	7414582	+	Missense_Mutation	SNP	C	A	A	rs56090491	byFrequency;by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486335	94486335	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486335	94486335	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10473896	10473896	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10473896	10473896	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10L	140801	broad.mit.edu	37	14	47120853	47120853	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10L	140801	broad.mit.edu	37	14	47120853	47120853	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL11	6135	broad.mit.edu	37	1	24018423	24018423	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL11	6135	broad.mit.edu	37	1	24018423	24018423	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS11	6205	broad.mit.edu	37	19	50001381	50001381	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS11	6205	broad.mit.edu	37	19	50001381	50001381	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1	54665	broad.mit.edu	37	1	114354250	114354250	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1	54665	broad.mit.edu	37	1	114354250	114354250	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62292695	62292695	+	Silent	SNP	G	C	C	rs114124243	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62292695	62292695	+	Silent	SNP	G	C	C	rs114124243	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67696066	67696066	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67872934	67872934	+	5'UTR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67696066	67696066	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67872934	67872934	+	5'UTR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71644082	71644082	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71644082	71644082	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC1	146923	broad.mit.edu	37	17	41143758	41143758	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC1	146923	broad.mit.edu	37	17	41143758	41143758	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165370562	165370562	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38946065	38946065	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38946065	38946065	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237656342	237656342	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237660131	237660131	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237753866	237753866	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237906849	237906850	+	Intron	DNP	CA	AG	AG			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237656342	237656342	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237660131	237660131	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237753866	237753866	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237906849	237906850	+	Intron	DNP	CA	AG	AG			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33927047	33927047	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34034707	34034707	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33927047	33927047	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34034707	34034707	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134983834	134983834	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134983834	134983834	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15872992	15872992	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15885049	15885049	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15872992	15872992	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15885049	15885049	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224462975	224462975	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224462975	224462975	+	Silent	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	51991556	51991556	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	51991556	51991556	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018615	62018615	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018615	62018615	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30865903	30865903	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30865903	30865903	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13846176	13846176	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13846176	13846176	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94770786	94770786	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94770786	94770786	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936237	94936238	+	Intron	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936237	94936238	+	Intron	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61259614	61259614	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61259614	61259614	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB5	5268	broad.mit.edu	37	18	61166417	61166417	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB5	5268	broad.mit.edu	37	18	61166417	61166417	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198265462	198265462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198265462	198265462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70599102	70599102	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70599102	70599102	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7290439	7290439	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7290439	7290439	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCG	6445	broad.mit.edu	37	13	23853548	23853548	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCG	6445	broad.mit.edu	37	13	23853548	23853548	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77471208	77471208	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77471208	77471208	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19701923	19701923	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19701923	19701923	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51215272	51215272	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51215272	51215272	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	591557	591557	+	5'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	601720	601720	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	591557	591557	+	5'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	591669	591669	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	601720	601720	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH3	283514	broad.mit.edu	37	13	46425646	46425646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH3	283514	broad.mit.edu	37	13	46425646	46425646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72196611	72196611	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72196611	72196611	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1895886	1895886	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1895886	1895886	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIL	6498	broad.mit.edu	37	3	170078605	170078605	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIL	6498	broad.mit.edu	37	3	170078605	170078605	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN1	122060	broad.mit.edu	37	13	78293813	78293813	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127446010	127446010	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127446010	127446010	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25773866	25773866	+	Silent	SNP	G	C	C	rs146741384		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25773866	25773866	+	Silent	SNP	G	C	C	rs146741384		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36608599	36608599	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36608599	36608599	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15063936	15063936	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15075016	15075016	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15063936	15063936	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15075016	15075016	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A35	399512	broad.mit.edu	37	17	8200108	8200108	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A35	399512	broad.mit.edu	37	17	8200108	8200108	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85448795	85448795	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85487830	85487830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85487830	85487830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35A2	7355	broad.mit.edu	37	X	48762073	48762073	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35A2	7355	broad.mit.edu	37	X	48762073	48762073	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A3	84255	broad.mit.edu	37	7	140055426	140055427	+	Intron	DEL	AG	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75684332	75684332	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33951520	33951520	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33951520	33951520	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108604753	108604753	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108604753	108604753	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A9	200010	broad.mit.edu	37	1	48708300	48708300	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A9	200010	broad.mit.edu	37	1	48708300	48708300	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10971110	10971110	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10971110	10971110	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A16	28968	broad.mit.edu	37	19	49812162	49812162	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A16	28968	broad.mit.edu	37	19	49812162	49812162	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A8	6535	broad.mit.edu	37	X	152957588	152957588	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A8	6535	broad.mit.edu	37	X	152957588	152957588	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70149961	70149961	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70149961	70149961	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A7	84679	broad.mit.edu	37	X	46521949	46521949	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A7	84679	broad.mit.edu	37	X	46521949	46521949	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98816044	98816044	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98816044	98816044	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20540984	20540984	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20540984	20540984	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128657272	128657272	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128657272	128657272	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD1	6609	broad.mit.edu	37	11	6415869	6415869	+	3'UTR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD1	6609	broad.mit.edu	37	11	6415869	6415869	+	3'UTR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD3	55512	broad.mit.edu	37	16	68405827	68405827	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD3	55512	broad.mit.edu	37	16	68405827	68405827	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD4	114826	broad.mit.edu	37	17	1690320	1690320	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD4	114826	broad.mit.edu	37	17	1690320	1690320	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI1	6615	broad.mit.edu	37	20	48600678	48600678	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI1	6615	broad.mit.edu	37	20	48600678	48600678	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOCS6	9306	broad.mit.edu	37	18	67992886	67992886	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOCS6	9306	broad.mit.edu	37	18	67992886	67992886	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA6	54558	broad.mit.edu	37	1	48791097	48791097	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA6	54558	broad.mit.edu	37	1	48791097	48791097	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54839186	54839186	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54839186	54839186	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRM	6723	broad.mit.edu	37	1	11119777	11119777	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRM	6723	broad.mit.edu	37	1	11119777	11119777	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38019191	38019191	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100485189	100485189	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100485189	100485189	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53077597	53077597	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53077597	53077597	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104054243	104054243	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104054243	104054243	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171517130	171517130	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171517130	171517130	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOM	2040	broad.mit.edu	37	9	124110399	124110399	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOM	2040	broad.mit.edu	37	9	124110399	124110399	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX2	2054	broad.mit.edu	37	12	131293251	131293251	+	Splice_Site	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX2	2054	broad.mit.edu	37	12	131293251	131293251	+	Splice_Site	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2B	9899	broad.mit.edu	37	15	91809768	91809768	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2B	9899	broad.mit.edu	37	15	91809768	91809768	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SWAP70	23075	broad.mit.edu	37	11	9759806	9759806	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SWAP70	23075	broad.mit.edu	37	11	9759806	9759806	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN2	6854	broad.mit.edu	37	3	12112161	12112161	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN2	6854	broad.mit.edu	37	3	12112161	12112161	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	33260992	33260992	+	Splice_Site	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	33260992	33260992	+	Splice_Site	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64473833	64473833	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64516346	64516346	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64473833	64473833	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64516346	64516346	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYS1	90196	broad.mit.edu	37	20	44004245	44004245	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYS1	90196	broad.mit.edu	37	20	44004245	44004245	+	3'UTR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45275883	45275883	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45275883	45275883	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40853633	40853633	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40853633	40853633	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37893284	37893284	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37893284	37893284	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR5	9038	broad.mit.edu	37	6	132910380	132910380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR5	9038	broad.mit.edu	37	6	132910380	132910380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222736579	222736579	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222736579	222736579	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4B	6875	broad.mit.edu	37	18	23807085	23807085	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4B	6875	broad.mit.edu	37	18	23807085	23807085	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK1	57551	broad.mit.edu	37	17	27857754	27857754	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R60	338398	broad.mit.edu	37	7	143140666	143140666	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R60	338398	broad.mit.edu	37	7	143140666	143140666	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TASP1	55617	broad.mit.edu	37	20	13514864	13514864	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TASP1	55617	broad.mit.edu	37	20	13514864	13514864	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D28	254272	broad.mit.edu	37	17	18539621	18539621	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D28	254272	broad.mit.edu	37	17	18539621	18539621	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBP	6908	broad.mit.edu	37	6	170871076	170871076	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBP	6908	broad.mit.edu	37	6	170871076	170871076	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT1	83659	broad.mit.edu	37	17	6703489	6703489	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT1	83659	broad.mit.edu	37	17	6703489	6703489	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX11	56159	broad.mit.edu	37	X	69902602	69902602	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX11	56159	broad.mit.edu	37	X	69902602	69902602	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50696930	50696931	+	Missense_Mutation	DNP	GC	CA	CA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50696930	50696931	+	Missense_Mutation	DNP	GC	CA	CA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2	7024	broad.mit.edu	37	12	51495784	51495784	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2	7024	broad.mit.edu	37	12	51495784	51495784	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2315719	2315719	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2315719	2315719	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133980005	133980005	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133980005	133980005	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169642065	169642065	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169642065	169642065	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156346503	156346503	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156351545	156351545	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156346503	156346503	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166910706	166910706	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166910706	166910706	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM4SF1	4071	broad.mit.edu	37	3	149093324	149093324	+	Missense_Mutation	SNP	A	T	T	rs140811683		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM4SF1	4071	broad.mit.edu	37	3	149093324	149093324	+	Missense_Mutation	SNP	A	T	T	rs140811683		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC7	79905	broad.mit.edu	37	16	19041391	19041391	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC7	79905	broad.mit.edu	37	16	19041391	19041391	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM196	256130	broad.mit.edu	37	7	19765251	19765251	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM196	256130	broad.mit.edu	37	7	19765251	19765251	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM20	159371	broad.mit.edu	37	10	95661109	95661109	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM20	159371	broad.mit.edu	37	10	95661109	95661109	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68829043	68829043	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68829043	68829043	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29669312	29669312	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29669312	29669312	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10A	8797	broad.mit.edu	37	8	23058174	23058174	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10A	8797	broad.mit.edu	37	8	23058174	23058174	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10D	8793	broad.mit.edu	37	8	22995579	22995579	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10D	8793	broad.mit.edu	37	8	22995579	22995579	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF4	7293	broad.mit.edu	37	1	1147551	1147551	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF4	7293	broad.mit.edu	37	1	1147551	1147551	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170858245	170858245	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170858245	170858245	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT1	7138	broad.mit.edu	37	19	55652219	55652220	+	Intron	INS	-	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT1	7138	broad.mit.edu	37	19	55652219	55652220	+	Intron	INS	-	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175096160	175096160	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175096160	175096160	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32035686	32035686	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32035686	32035686	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577548	7577548	+	Missense_Mutation	SNP	C	A	A	rs28934575		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577548	7577548	+	Missense_Mutation	SNP	C	A	A	rs28934575		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144380159	144380159	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144380159	144380159	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186305610	186305610	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186305610	186305610	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM10	10107	broad.mit.edu	37	6	30121906	30121906	+	Missense_Mutation	SNP	C	A	A	rs137941157	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM10	10107	broad.mit.edu	37	6	30121906	30121906	+	Missense_Mutation	SNP	C	A	A	rs137941157	byFrequency	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM2	23321	broad.mit.edu	37	4	154191528	154191528	+	5'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM2	23321	broad.mit.edu	37	4	154191528	154191528	+	5'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM69	140691	broad.mit.edu	37	15	45059693	45059693	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM69	140691	broad.mit.edu	37	15	45059693	45059693	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189012705	189012705	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189012705	189012705	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111195529	111195529	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111195529	111195529	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135567003	135567003	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135567003	135567003	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45834003	45834003	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45834003	45834003	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3458179	3458179	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3458179	3458179	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142626249	142626249	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142626249	142626249	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51871779	51871780	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51871779	51871780	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKU	25987	broad.mit.edu	37	11	76506673	76506675	+	In_Frame_Del	DEL	CTG	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR2	90121	broad.mit.edu	37	X	54466893	54466893	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR2	90121	broad.mit.edu	37	X	54466893	54466893	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179588668	179588668	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179588668	179588668	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTR	7276	broad.mit.edu	37	18	29178553	29178553	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTR	7276	broad.mit.edu	37	18	29178553	29178553	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1	55253	broad.mit.edu	37	7	66482836	66482836	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN1	29855	broad.mit.edu	37	16	4910738	4910738	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN1	29855	broad.mit.edu	37	16	4910738	4910738	+	Silent	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN2	29978	broad.mit.edu	37	X	56591074	56591074	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN2	29978	broad.mit.edu	37	X	56591074	56591074	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR7	55148	broad.mit.edu	37	14	93688768	93688768	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR7	55148	broad.mit.edu	37	14	93688768	93688768	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128941189	128941189	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128941189	128941189	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK2	9706	broad.mit.edu	37	17	19699311	19699311	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK2	9706	broad.mit.edu	37	17	19699311	19699311	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91482943	91482943	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91482943	91482943	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33513323	33513323	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33513323	33513323	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216011316	216011316	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216011316	216011316	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP16	10600	broad.mit.edu	37	21	30403014	30403014	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP16	10600	broad.mit.edu	37	21	30403014	30403014	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP24	23358	broad.mit.edu	37	1	55600100	55600100	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP24	23358	broad.mit.edu	37	1	55600100	55600100	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP26	83844	broad.mit.edu	37	X	132160953	132160953	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP26	83844	broad.mit.edu	37	X	132160953	132160953	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58268048	58268048	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58268048	58268048	+	Intron	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP51	158880	broad.mit.edu	37	X	55513306	55513306	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP51	158880	broad.mit.edu	37	X	55513306	55513306	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5035773	5035773	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5035773	5035773	+	Intron	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8995984	8995984	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8995984	8995984	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41003923	41003923	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41003923	41003923	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446603	107446603	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39011248	39011248	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42672417	42672417	+	IGR	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46215356	46215356	+	IGR	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65929434	65929434	+	IGR	SNP	T	A	A	rs34995845		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	86320356	86320356	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	98510055	98510055	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104744127	104744127	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56268025	56268025	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58117061	58117061	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58134114	58134114	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6078834	6078834	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	80364984	80364984	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	13003936	13003936	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34318663	34318663	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	45466221	45466221	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	66502095	66502095	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68429987	68429987	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111589644	111589644	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19393386	19393386	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	21668817	21668817	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841256	67841256	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20265420	20265420	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	50517635	50517635	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20178505	20178505	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20457207	20457207	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22777623	22777623	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22777719	22777719	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	80237435	80237435	+	IGR	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	85805938	85805938	+	IGR	SNP	G	A	A	rs1810167		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31985040	31985040	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32489491	32489491	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33123857	33123857	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25998182	25998182	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26080421	26080421	+	IGR	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	29376513	29376513	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11609632	11609632	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	7712771	7712771	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101722155	101722155	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	153353216	153353216	+	IGR	SNP	G	T	T	rs73018447	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248309449	248309449	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	67744389	67744389	+	IGR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29873849	29873849	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40626211	40626211	+	IGR	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181062	11181062	+	IGR	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181686	11181686	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17318487	17318487	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106905396	106905396	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182559235	182559235	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	207275366	207275366	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065290	34065290	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	63911587	63911587	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97716135	97716135	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	125431256	125431256	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	15175666	15175666	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1637518	1637518	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130058989	130058989	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137276357	137276357	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165850732	165850732	+	IGR	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65297522	65297522	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	8984019	8984019	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	138873874	138873874	+	IGR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066710	40066711	+	IGR	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975262	121975262	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	147727892	147727892	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529227	27529227	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	112375735	112375735	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	118590476	118590476	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399677	136399677	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144702752	144702753	+	IGR	DNP	CC	AA	AA	rs76413566		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27501967	27501967	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	45574033	45574033	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55745424	55745424	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56928471	56928471	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216603	57216603	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6970540	6970540	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767588	9767588	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	6940703	6940703	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	6940776	6940776	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7217297	7217297	+	IGR	SNP	C	A	A	rs140787597	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29825973	29825973	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44115070	44115070	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	74204586	74204586	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100211733	100211733	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	113624006	113624006	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118355308	118355308	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120337442	120337442	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127575450	127575450	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	13396838	13396838	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134772517	134772517	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	155059151	155059151	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46278445	46278445	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47663352	47663352	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48291603	48291603	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89294326	89294326	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446603	107446603	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39011248	39011248	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46215356	46215356	+	IGR	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65929434	65929434	+	IGR	SNP	T	A	A	rs34995845		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	86320356	86320356	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	98510055	98510055	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56268025	56268025	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58117061	58117061	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58134114	58134114	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6078834	6078834	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	80364984	80364984	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	13003936	13003936	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34318663	34318663	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	45466221	45466221	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	66502095	66502095	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68429987	68429987	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8167718	8167718	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111589644	111589644	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19393386	19393386	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	21668817	21668817	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841256	67841256	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20265420	20265420	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	50517635	50517635	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20178505	20178505	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20457207	20457207	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22777623	22777623	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22777719	22777719	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	80237435	80237435	+	IGR	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84860734	84860734	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31985040	31985040	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32489491	32489491	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33123856	33123856	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25998182	25998182	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26080421	26080421	+	IGR	DEL	C	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	29376513	29376513	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11609632	11609632	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101722155	101722155	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	153353216	153353216	+	IGR	SNP	G	T	T	rs73018447	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248309449	248309449	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	67744389	67744389	+	IGR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29873849	29873849	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40626211	40626211	+	IGR	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181062	11181062	+	IGR	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181686	11181686	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17318487	17318487	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106905396	106905396	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182559235	182559235	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065290	34065290	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	63911587	63911587	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97716135	97716135	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	125431256	125431256	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	15175666	15175666	+	IGR	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1637518	1637518	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130058989	130058989	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137276357	137276357	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165850732	165850732	+	IGR	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65297522	65297522	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	8984019	8984019	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	138873874	138873874	+	IGR	SNP	T	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	37086022	37086022	+	IGR	DEL	A	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066710	40066711	+	IGR	DNP	GG	TT	TT			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975262	121975262	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	147727892	147727892	+	IGR	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529227	27529227	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	112375735	112375735	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399677	136399677	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144702752	144702753	+	IGR	DNP	CC	AA	AA	rs76413566		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27501967	27501967	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	45574033	45574033	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55745424	55745424	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56928471	56928471	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216603	57216603	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6970540	6970540	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767588	9767588	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	6940703	6940703	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	6940776	6940776	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7217297	7217297	+	IGR	SNP	C	A	A	rs140787597	by1000genomes	TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29825973	29825973	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	74204586	74204586	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100211733	100211733	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	113624006	113624006	+	IGR	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118355308	118355308	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120337442	120337442	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127575450	127575450	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	13396838	13396838	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134772517	134772517	+	IGR	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	155059151	155059151	+	IGR	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46278445	46278445	+	IGR	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47663352	47663352	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48291603	48291603	+	IGR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89294326	89294326	+	IGR	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101185498	101185498	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101185498	101185498	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95668488	95668488	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95668488	95668488	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK2	7444	broad.mit.edu	37	2	58276144	58276144	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK2	7444	broad.mit.edu	37	2	58276144	58276144	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61032546	61032546	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61032546	61032546	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF1	8936	broad.mit.edu	37	6	110428447	110428447	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF1	8936	broad.mit.edu	37	6	110428447	110428447	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9544957	9544957	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9544957	9544957	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR46	9277	broad.mit.edu	37	6	33256835	33256835	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR46	9277	broad.mit.edu	37	6	33256835	33256835	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49044995	49044995	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49044995	49044995	+	Intron	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR92	116143	broad.mit.edu	37	2	68352471	68352471	+	RNA	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR92	116143	broad.mit.edu	37	2	68352471	68352471	+	RNA	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF2	147179	broad.mit.edu	37	17	38420636	38420636	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF2	147179	broad.mit.edu	37	17	38420636	38420636	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT5A	7474	broad.mit.edu	37	3	55504432	55504433	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT5A	7474	broad.mit.edu	37	3	55504432	55504433	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB1	26118	broad.mit.edu	37	17	25630509	25630509	+	Missense_Mutation	SNP	T	C	C	rs142114425		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB1	26118	broad.mit.edu	37	17	25631888	25631888	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB1	26118	broad.mit.edu	37	17	25630509	25630509	+	Missense_Mutation	SNP	T	C	C	rs142114425		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB1	26118	broad.mit.edu	37	17	25631888	25631888	+	Silent	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73064562	73064562	+	RNA	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73064562	73064562	+	RNA	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKRX	402415	broad.mit.edu	37	X	100178004	100178004	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKRX	402415	broad.mit.edu	37	X	100178004	100178004	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128894695	128894695	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128894695	128894695	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135779380	135779380	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135779380	135779380	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC1	91746	broad.mit.edu	37	4	69195782	69195782	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC1	91746	broad.mit.edu	37	4	69195782	69195782	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBP1	81030	broad.mit.edu	37	20	56185428	56185428	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB2	57621	broad.mit.edu	37	6	151687533	151687533	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB2	57621	broad.mit.edu	37	6	151687533	151687533	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB33	10009	broad.mit.edu	37	X	119387450	119387450	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB33	10009	broad.mit.edu	37	X	119387450	119387450	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB48	3104	broad.mit.edu	37	1	6646147	6646147	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB48	3104	broad.mit.edu	37	1	6646147	6646147	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135622977	135622977	+	Intron	SNP	C	A	A	rs35253760		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135622977	135622977	+	Intron	SNP	C	A	A	rs35253760		TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72056983	72056983	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72056983	72056983	+	Silent	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP36	7538	broad.mit.edu	37	19	39898874	39898874	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP36	7538	broad.mit.edu	37	19	39898874	39898874	+	Silent	SNP	G	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106431305	106431305	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106431305	106431305	+	Intron	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC2	7546	broad.mit.edu	37	13	100635008	100635010	+	In_Frame_Del	DEL	CCA	-	-			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70472410	70472410	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70472410	70472410	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF133	7692	broad.mit.edu	37	20	18297153	18297153	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF133	7692	broad.mit.edu	37	20	18297153	18297153	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38108039	38108039	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38108039	38108039	+	Intron	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF260	339324	broad.mit.edu	37	19	37005408	37005408	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF260	339324	broad.mit.edu	37	19	37005408	37005408	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF343	79175	broad.mit.edu	37	20	2464342	2464342	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF343	79175	broad.mit.edu	37	20	2464342	2464342	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21606170	21606170	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21606170	21606170	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF397	84307	broad.mit.edu	37	18	32822650	32822650	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF397	84307	broad.mit.edu	37	18	32822650	32822650	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52937105	52937105	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52937105	52937105	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF546	339327	broad.mit.edu	37	19	40520110	40520110	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF546	339327	broad.mit.edu	37	19	40520110	40520110	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF555	148254	broad.mit.edu	37	19	2852695	2852695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF555	148254	broad.mit.edu	37	19	2852695	2852695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF558	148156	broad.mit.edu	37	19	8932670	8932670	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF558	148156	broad.mit.edu	37	19	8932670	8932670	+	Intron	SNP	C	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF577	84765	broad.mit.edu	37	19	52376255	52376255	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF577	84765	broad.mit.edu	37	19	52376255	52376255	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF793	390927	broad.mit.edu	37	19	38028034	38028034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF793	390927	broad.mit.edu	37	19	38028034	38028034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127014765	127014765	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127014765	127014765	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801850	185801850	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801850	185801850	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5A	79149	broad.mit.edu	37	19	56734248	56734248	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5A	79149	broad.mit.edu	37	19	56734248	56734248	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56704299	56704299	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56704299	56704299	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30992654	30992654	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71527635	71527635	+	5'Flank	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22908059	22908059	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	66480164	66480164	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25430929	25430929	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	62539470	62539470	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21561716	21561716	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29394846	29394846	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16721982	16721982	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	42002721	42002721	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23159803	23159803	+	RNA	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	12164277	12164277	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89890477	89890477	+	5'Flank	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374287	95374287	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28927246	28927246	+	RNA	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86568066	86568066	+	5'Flank	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513818	66513818	+	RNA	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90744544	90744544	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	154045336	154045336	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30992654	30992654	+	Intron	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71527635	71527635	+	5'Flank	SNP	T	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22908059	22908059	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	66480164	66480164	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25430929	25430929	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	62539470	62539470	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21561716	21561716	+	Intron	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29394846	29394846	+	Intron	SNP	G	C	C			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16721982	16721982	+	Intron	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	42002721	42002721	+	5'Flank	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23159803	23159803	+	RNA	SNP	C	A	A			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	12164277	12164277	+	Intron	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89890477	89890477	+	5'Flank	SNP	C	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374287	95374287	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28927246	28927246	+	RNA	SNP	A	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513818	66513818	+	RNA	SNP	A	G	G			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90744544	90744544	+	3'UTR	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	154045336	154045336	+	RNA	SNP	G	T	T			TCGA-44-6774-01A-21D-1855-08	TCGA-44-6774-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
