Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA12	26154	broad.mit.edu	37	2	215821447	215821447	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215821447	215821447	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43639333	43639338	+	5'UTR	DEL	CCGCCG	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABR	29	broad.mit.edu	37	17	1003898	1003898	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABR	29	broad.mit.edu	37	17	1003898	1003898	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89414526	89414526	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89414526	89414526	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT12	134526	broad.mit.edu	37	5	80640895	80640895	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT12	134526	broad.mit.edu	37	5	80640895	80640895	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20435240	20435240	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20435240	20435240	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236900342	236900342	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236900342	236900342	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104244124	104244124	+	Silent	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104244124	104244124	+	Silent	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158390390	158390390	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158390390	158390390	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207406688	207406688	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207406688	207406688	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106110084	106110084	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106963317	106963317	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107169981	107169981	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107282967	107282967	+	RNA	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106110084	106110084	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106963317	106963317	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107282967	107282967	+	RNA	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84488857	84488857	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84488857	84488857	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY4	196883	broad.mit.edu	37	14	24800251	24800251	+	Silent	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY4	196883	broad.mit.edu	37	14	24800251	24800251	+	Silent	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70906010	70906010	+	Silent	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70906010	70906010	+	Silent	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148680815	148680815	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148680815	148680815	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L2	84632	broad.mit.edu	37	10	116056568	116056568	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129265423	129265423	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129265423	129265423	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4771900	4771900	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4771900	4771900	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58247560	58247560	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58247560	58247560	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH7A1	501	broad.mit.edu	37	5	125928449	125928449	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH7A1	501	broad.mit.edu	37	5	125928449	125928449	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29455189	29455189	+	Missense_Mutation	SNP	G	T	T	rs150557024	byFrequency;by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29455189	29455189	+	Missense_Mutation	SNP	G	T	T	rs150557024	byFrequency;by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX15B	247	broad.mit.edu	37	17	7950422	7950422	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX15B	247	broad.mit.edu	37	17	7950422	7950422	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38502605	38502605	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38502605	38502605	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114176842	114176842	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114176842	114176842	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95511198	95511198	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95511198	95511198	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14784490	14784490	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14784490	14784490	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69397269	69397280	+	Intron	DEL	CATTGCCATGGT	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69397269	69397280	+	Intron	DEL	CATTGCCATGGT	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3G	60489	broad.mit.edu	37	22	39479947	39479947	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3G	60489	broad.mit.edu	37	22	39479947	39479947	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7P1	375719	broad.mit.edu	37	9	67281693	67281693	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7P1	375719	broad.mit.edu	37	9	67281693	67281693	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7	364	broad.mit.edu	37	9	33386847	33386847	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAF	369	broad.mit.edu	37	X	47430233	47430233	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAF	369	broad.mit.edu	37	X	47430233	47430233	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP1	116985	broad.mit.edu	37	11	72422035	72422036	+	Intron	DEL	AC	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARC	23237	broad.mit.edu	37	8	143695607	143695608	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARC	23237	broad.mit.edu	37	8	143695607	143695608	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144062360	144062360	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144062360	144062360	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMTL	8623	broad.mit.edu	37	X	1547051	1547051	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMTL	8623	broad.mit.edu	37	X	1547051	1547051	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176863861	176863861	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176863861	176863861	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77289241	77289241	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77289241	77289241	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52511913	52511913	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52511913	52511913	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039319	11039319	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039321	11039321	+	3'UTR	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039319	11039319	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039321	11039321	+	3'UTR	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHD1	22893	broad.mit.edu	37	15	40751953	40751953	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHD1	22893	broad.mit.edu	37	15	40751953	40751953	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAP31	10134	broad.mit.edu	37	X	152988533	152988533	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAP31	10134	broad.mit.edu	37	X	152988533	152988533	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCKDHA	593	broad.mit.edu	37	19	41917064	41917064	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9L	283149	broad.mit.edu	37	11	118772195	118772195	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9L	283149	broad.mit.edu	37	11	118772195	118772195	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112046188	112046188	+	5'Flank	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129155221	129155221	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129155221	129155221	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BFSP1	631	broad.mit.edu	37	20	17492544	17492544	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BFSP1	631	broad.mit.edu	37	20	17492544	17492544	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHE40	8553	broad.mit.edu	37	3	5024990	5024991	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHE40	8553	broad.mit.edu	37	3	5024990	5024991	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22037119	22037119	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22037119	22037119	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPGM	669	broad.mit.edu	37	7	134363847	134363847	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPGM	669	broad.mit.edu	37	7	134363847	134363847	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220232077	220232077	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220232077	220232077	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5782228	5782228	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5782228	5782228	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf115	55237	broad.mit.edu	37	14	74825221	74825221	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf115	55237	broad.mit.edu	37	14	74825221	74825221	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf51	339263	broad.mit.edu	37	17	21476990	21476990	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30804919	30804919	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30804919	30804919	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf61	56006	broad.mit.edu	37	19	44251904	44251904	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf61	56006	broad.mit.edu	37	19	44251904	44251904	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247719802	247719802	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247719802	247719802	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75097536	75097536	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75097536	75097536	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf66	51093	broad.mit.edu	37	1	156703953	156703953	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20168823	20168823	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20168823	20168823	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf99	149992	broad.mit.edu	37	21	14414832	14414832	+	RNA	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf99	149992	broad.mit.edu	37	21	14414832	14414832	+	RNA	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63540452	63540452	+	Intron	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63540452	63540452	+	Intron	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123783854	123783854	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123783854	123783854	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37209865	37209865	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37209865	37209865	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf49	134121	broad.mit.edu	37	5	7831887	7831887	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf49	134121	broad.mit.edu	37	5	7831887	7831887	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf70	55780	broad.mit.edu	37	6	170156936	170156936	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf70	55780	broad.mit.edu	37	6	170156936	170156936	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120907143	120907143	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57411544	57411544	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57411544	57411544	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf172	389813	broad.mit.edu	37	9	139741079	139741079	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf172	389813	broad.mit.edu	37	9	139741079	139741079	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2613703	2613703	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2797830	2797830	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2613703	2613703	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2797830	2797830	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG5	27091	broad.mit.edu	37	17	64876776	64876776	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG5	27091	broad.mit.edu	37	17	64876776	64876776	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG8	59283	broad.mit.edu	37	19	54483022	54483022	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG8	59283	broad.mit.edu	37	19	54483022	54483022	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27459689	27459689	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27459689	27459689	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAP2	10486	broad.mit.edu	37	6	17556694	17556694	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAP2	10486	broad.mit.edu	37	6	17556694	17556694	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42691595	42691595	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42691595	42691595	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC5	57082	broad.mit.edu	37	15	40951477	40951477	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77247224	77247224	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77247224	77247224	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180334034	180334034	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180334036	180334036	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180334034	180334034	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180334036	180334036	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6292734	6292734	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6292734	6292734	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD207	50489	broad.mit.edu	37	2	71058782	71058782	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD207	50489	broad.mit.edu	37	2	71058782	71058782	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPG	55561	broad.mit.edu	37	11	64609042	64609042	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX2	1045	broad.mit.edu	37	13	28538912	28538912	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX2	1045	broad.mit.edu	37	13	28538912	28538912	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CECR1	51816	broad.mit.edu	37	22	17688152	17688152	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CECR1	51816	broad.mit.edu	37	22	17688152	17688152	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214825322	214825322	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214825322	214825322	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CETN3	1070	broad.mit.edu	37	5	89705317	89705317	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CETN3	1070	broad.mit.edu	37	5	89705317	89705317	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87795485	87795485	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87795485	87795485	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40050551	40050551	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40052343	40052343	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40050551	40050551	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40052343	40052343	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125499295	125499295	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125499295	125499295	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	361385	361385	+	5'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	383542	383542	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	361385	361385	+	5'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	383542	383542	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHODL	140578	broad.mit.edu	37	21	19638184	19638184	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRFAM7A	89832	broad.mit.edu	37	15	30659770	30659770	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRFAM7A	89832	broad.mit.edu	37	15	30659770	30659770	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNG	1146	broad.mit.edu	37	2	233406238	233406238	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNG	1146	broad.mit.edu	37	2	233406238	233406238	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST8	64377	broad.mit.edu	37	19	34263296	34263296	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST8	64377	broad.mit.edu	37	19	34263296	34263296	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140282157	140282157	+	Intron	SNP	G	A	A	rs143848411	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140282157	140282157	+	Intron	SNP	G	A	A	rs143848411	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74414733	74414733	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74414733	74414733	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP1	8506	broad.mit.edu	37	17	40840012	40840012	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP1	8506	broad.mit.edu	37	17	40840012	40840012	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7850813	7850813	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7850813	7850813	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103364517	103364517	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103412357	103412357	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103364517	103364517	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103412357	103412357	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121383262	121383262	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121383262	121383262	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110817329	110817329	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110817329	110817329	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107437603	107437603	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107437603	107437603	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137642617	137642617	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137642617	137642617	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO7	79585	broad.mit.edu	37	16	4466396	4466396	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO7	79585	broad.mit.edu	37	16	4466396	4466396	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX4	339302	broad.mit.edu	37	18	56963966	56963966	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX4	339302	broad.mit.edu	37	18	56963966	56963966	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131300384	131300384	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131300384	131300384	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1389175	1389175	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1389175	1389175	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75932314	75932314	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75932314	75932314	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4851865	4851865	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4851865	4851865	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113350062	113350062	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113657234	113657234	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114389117	114389117	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113350062	113350062	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113657234	113657234	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114389117	114389117	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80101445	80101446	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80101445	80101446	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107299764	107299764	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107299764	107299764	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49005982	49005982	+	Missense_Mutation	SNP	G	T	T	rs139364544		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49005982	49005982	+	Missense_Mutation	SNP	G	T	T	rs139364544		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74654301	74654301	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74654301	74654301	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143996498	143996498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143998689	143998689	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143996498	143996498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143998689	143998689	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96740969	96740969	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96740969	96740969	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85559528	85559528	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85559530	85559530	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85559528	85559528	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85559530	85559530	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24586758	24586758	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24586758	24586758	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF16	54876	broad.mit.edu	37	4	17805113	17805113	+	3'UTR	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF16	54876	broad.mit.edu	37	4	17805113	17805113	+	3'UTR	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155312272	155312272	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155312272	155312272	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14996080	14996080	+	5'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14996080	14996080	+	5'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN4	51164	broad.mit.edu	37	5	150121678	150121678	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN4	51164	broad.mit.edu	37	5	150121678	150121678	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31256670	31256670	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31256670	31256670	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX54	79039	broad.mit.edu	37	12	113600946	113600946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX54	79039	broad.mit.edu	37	12	113600946	113600946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169190053	169190053	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169190053	169190053	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65989642	65989642	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65989642	65989642	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42644789	42644789	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42644789	42644789	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS2	10202	broad.mit.edu	37	14	24113979	24113979	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS2	10202	broad.mit.edu	37	14	24113979	24113979	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80677806	80677807	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80677806	80677807	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233195495	233195495	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233195495	233195495	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83673918	83673918	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83673918	83673918	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69670523	69670523	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69670523	69670523	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124359397	124359397	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124359397	124359397	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31645941	31645941	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31645941	31645941	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183605156	183605156	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183605156	183605156	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169129281	169129281	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169423010	169423010	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169129281	169129281	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169423010	169423010	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154587604	154587604	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154587604	154587604	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35144364	35144364	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35144364	35144364	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28986162	28986162	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28986162	28986162	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32400802	32400802	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32400802	32400802	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68109324	68109324	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68109324	68109324	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95657604	95657604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95657604	95657604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	69255353	69255353	+	Missense_Mutation	SNP	G	T	T	rs61747506		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	69255353	69255353	+	Missense_Mutation	SNP	G	T	T	rs61747506		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106406784	106406784	+	3'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106406784	106406784	+	3'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	43986047	43986047	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	43986047	43986047	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC2	80258	broad.mit.edu	37	X	44120233	44120233	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC2	80258	broad.mit.edu	37	X	44120233	44120233	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B5	8893	broad.mit.edu	37	3	183860960	183860960	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B5	8893	broad.mit.edu	37	3	183860960	183860960	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML1	2009	broad.mit.edu	37	14	100345068	100345068	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML1	2009	broad.mit.edu	37	14	100345068	100345068	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENDOU	8909	broad.mit.edu	37	12	48119241	48119241	+	5'UTR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENDOU	8909	broad.mit.edu	37	12	48119241	48119241	+	5'UTR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43930271	43930271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43930271	43930271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66467235	66467235	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66467235	66467235	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22928027	22928027	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22928027	22928027	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23111087	23111087	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23111087	23111087	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562228	142562228	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562228	142562228	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPNL	339768	broad.mit.edu	37	2	239025450	239025450	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPNL	339768	broad.mit.edu	37	2	239025450	239025450	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM104B	90736	broad.mit.edu	37	X	55172504	55172504	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM104B	90736	broad.mit.edu	37	X	55172504	55172504	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139263221	139263221	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139263221	139263221	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	107823182	107823182	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	107823182	107823182	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37029325	37029325	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37029325	37029325	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55B	120406	broad.mit.edu	37	11	114569375	114569375	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55B	120406	broad.mit.edu	37	11	114569375	114569375	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24848310	24848310	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24848310	24848310	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	11985905	11985905	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156592744	156592744	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156592744	156592744	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627205	43627205	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89858871	89858871	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89858871	89858871	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163075857	163075857	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163075857	163075857	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187628565	187628565	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187628565	187628565	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBL	2091	broad.mit.edu	37	19	40337037	40337037	+	5'UTR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127671645	127671645	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL20	84961	broad.mit.edu	37	17	37441718	37441718	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL20	84961	broad.mit.edu	37	17	37441718	37441718	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928306	15928306	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928306	15928306	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40433188	40433188	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40433188	40433188	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125094556	125094556	+	Silent	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125094556	125094556	+	Silent	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38292020	38292020	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38292020	38292020	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135279254	135279254	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135279254	135279254	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL2	2274	broad.mit.edu	37	2	106002685	106002685	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL2	2274	broad.mit.edu	37	2	106002685	106002685	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142505489	142505490	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142505489	142505490	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXS1	2307	broad.mit.edu	37	20	30433325	30433325	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXS1	2307	broad.mit.edu	37	20	30433325	30433325	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79432632	79432632	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79432632	79432632	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13782496	13782496	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13782496	13782496	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD3	5349	broad.mit.edu	37	19	35614273	35614274	+	Intron	DEL	TG	-	-	rs113577293	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD3	5349	broad.mit.edu	37	19	35614273	35614274	+	Intron	DEL	TG	-	-	rs113577293	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46305705	46305705	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46305705	46305705	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46390489	46390489	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRP	2568	broad.mit.edu	37	5	170222178	170222178	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRP	2568	broad.mit.edu	37	5	170222178	170222178	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151818269	151818269	+	Silent	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151818269	151818269	+	Silent	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36034719	36034719	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36034719	36034719	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104019669	104019669	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLM	2730	broad.mit.edu	37	1	94362395	94362395	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLM	2730	broad.mit.edu	37	1	94362395	94362395	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT7	140687	broad.mit.edu	37	20	55091859	55091859	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT7	140687	broad.mit.edu	37	20	55091859	55091859	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1	54332	broad.mit.edu	37	8	75275089	75275089	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1	54332	broad.mit.edu	37	8	75275089	75275089	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58007844	58007844	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58007844	58007844	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA1	2674	broad.mit.edu	37	10	118029077	118029077	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA1	2674	broad.mit.edu	37	10	118029077	118029077	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59610073	59610073	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59610073	59610073	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJD2	57369	broad.mit.edu	37	15	35045635	35045635	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJD2	57369	broad.mit.edu	37	15	35045635	35045635	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKAP1	80318	broad.mit.edu	37	9	86399530	86399530	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKAP1	80318	broad.mit.edu	37	9	86399530	86399530	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134243835	134243835	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134243835	134243835	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6A	342096	broad.mit.edu	37	15	74365170	74365170	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6A	342096	broad.mit.edu	37	15	74365170	74365170	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLM1	51280	broad.mit.edu	37	9	88650566	88650566	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLM1	51280	broad.mit.edu	37	9	88650566	88650566	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42483385	42483385	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42483385	42483385	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136112642	136112642	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136112642	136112642	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR26	2849	broad.mit.edu	37	10	125426536	125426536	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87482866	87482866	+	Missense_Mutation	SNP	G	T	T	rs138984541		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87482866	87482866	+	Missense_Mutation	SNP	G	T	T	rs138984541		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102074079	102074079	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102074079	102074079	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37319110	37319110	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37319110	37319110	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108684589	108684589	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2AFY	9555	broad.mit.edu	37	5	134696094	134696094	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2AFY	9555	broad.mit.edu	37	5	134696094	134696094	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50546389	50546389	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50546389	50546389	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236734657	236734657	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236734657	236734657	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37302722	37302722	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37302722	37302722	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41018002	41018002	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41033002	41033002	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41018002	41018002	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELLS	3070	broad.mit.edu	37	10	96313838	96313838	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELLS	3070	broad.mit.edu	37	10	96313838	96313838	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210797062	210797062	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210797062	210797062	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31324851	31324852	+	Intron	INS	-	C	C	rs148300790	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31324851	31324852	+	Intron	INS	-	C	C	rs148300790	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLX	3142	broad.mit.edu	37	1	221055720	221055720	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLX	3142	broad.mit.edu	37	1	221055720	221055720	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27150309	27150309	+	5'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27150309	27150309	+	5'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46606822	46606822	+	3'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46606839	46606839	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46606822	46606822	+	3'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46606839	46606839	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188100	152188100	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188100	152188100	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148770681	148770681	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148770681	148770681	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118435785	118435786	+	Intron	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118435785	118435786	+	Intron	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATSF1	27336	broad.mit.edu	37	X	135585093	135585093	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATSF1	27336	broad.mit.edu	37	X	135585093	135585093	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTA	283902	broad.mit.edu	37	16	73126801	73126801	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTA	283902	broad.mit.edu	37	16	73126801	73126801	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBTK	25998	broad.mit.edu	37	6	82936912	82936912	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBTK	25998	broad.mit.edu	37	6	82936912	82936912	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94267793	94267793	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94267793	94267793	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA6	3443	broad.mit.edu	37	9	21350395	21350396	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA6	3443	broad.mit.edu	37	9	21350395	21350396	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23509547	23509547	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23509547	23509547	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67795397	67795397	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67795397	67795397	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RA	23765	broad.mit.edu	37	22	17589773	17589773	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RA	23765	broad.mit.edu	37	22	17589773	17589773	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1475018	1475018	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1475018	1475018	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143324296	143324296	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143324296	143324296	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15452366	15452366	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15452366	15452366	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17757877	17757877	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17757877	17757877	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150644119	150644119	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150644119	150644119	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36703176	36703176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36703176	36703176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110986332	110986332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110986332	110986332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55981449	55981449	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55981449	55981449	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610246	10610246	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610246	10610246	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48647674	48647675	+	Intron	DEL	GT	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0355	9710	broad.mit.edu	37	19	34818810	34818810	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0355	9710	broad.mit.edu	37	19	34818810	34818810	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81201518	81201518	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81201518	81201518	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138531204	138531204	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138531204	138531204	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1919959	1919959	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1919959	1919959	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF12	113220	broad.mit.edu	37	9	116859704	116859704	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF12	113220	broad.mit.edu	37	9	116859704	116859704	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26A	26153	broad.mit.edu	37	14	104624007	104624007	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69550032	69550032	+	Silent	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69637839	69637839	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69550032	69550032	+	Silent	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69637839	69637839	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKB1	3818	broad.mit.edu	37	4	187177231	187177231	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKB1	3818	broad.mit.edu	37	4	187177231	187177231	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRAQ1	129285	broad.mit.edu	37	2	48686770	48686770	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	T	T	rs121913529		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	T	T	rs121913529		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT37	8688	broad.mit.edu	37	17	39577329	39577329	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT37	8688	broad.mit.edu	37	17	39577329	39577329	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52845639	52845639	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52845639	52845639	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP11-1	337880	broad.mit.edu	37	21	32253450	32253450	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP11-1	337880	broad.mit.edu	37	21	32253450	32253450	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153135618	153135620	+	In_Frame_Del	DEL	TTG	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153135618	153135620	+	In_Frame_Del	DEL	TTG	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107600230	107600230	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107600230	107600230	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107710341	107710341	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107707065	107707065	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107710341	107710341	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAP3	51056	broad.mit.edu	37	4	17590484	17590484	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAP3	51056	broad.mit.edu	37	4	17590484	17590484	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	129076971	129076971	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	129076971	129076971	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18451592	18451592	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18451592	18451592	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36103274	36103274	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36103274	36103274	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086241	55086241	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086241	55086241	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55144405	55144405	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55144684	55144684	+	Silent	SNP	G	T	T	rs61739244	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55144405	55144405	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55144684	55144684	+	Silent	SNP	G	T	T	rs61739244	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN7A	8825	broad.mit.edu	37	12	81239642	81239642	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN7A	8825	broad.mit.edu	37	12	81239642	81239642	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNA	4000	broad.mit.edu	37	1	156104512	156104512	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNA	4000	broad.mit.edu	37	1	156104512	156104512	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118109401	118109401	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118109401	118109401	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160899576	160899576	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160899576	160899576	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140992521	140992521	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140992521	140992521	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4B	94030	broad.mit.edu	37	19	51021872	51021872	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4B	94030	broad.mit.edu	37	19	51021872	51021872	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC58	116064	broad.mit.edu	37	3	120054769	120054769	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC58	116064	broad.mit.edu	37	3	120054769	120054769	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71490202	71490202	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71490202	71490202	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242162358	242162358	+	5'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242162358	242162358	+	5'UTR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161491814	161491814	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161491814	161491814	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75317068	75317068	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75317068	75317068	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20060444	20060444	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20060444	20060444	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH10	162333	broad.mit.edu	37	17	60802398	60802398	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH10	162333	broad.mit.edu	37	17	60802398	60802398	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217142428	217142428	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217142428	217142428	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66460901	66460901	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66460901	66460901	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47690549	47690549	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47690549	47690549	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49954103	49954103	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49954103	49954103	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS1	4211	broad.mit.edu	37	2	66796016	66796016	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS1	4211	broad.mit.edu	37	2	66796016	66796016	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4C	25834	broad.mit.edu	37	12	86373314	86373314	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4C	25834	broad.mit.edu	37	12	86373314	86373314	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR211	406993	broad.mit.edu	37	15	31357279	31357279	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR211	406993	broad.mit.edu	37	15	31357279	31357279	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158813853	158813853	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158813853	158813853	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108719563	108719563	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108719563	108719563	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50547205	50547205	+	Silent	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50547205	50547205	+	Silent	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60767808	60767808	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47630474	47630474	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47630474	47630474	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9091467	9091467	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9091467	9091467	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100674617	100674617	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100674617	100674617	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1	84939	broad.mit.edu	37	19	1372987	1372987	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1	84939	broad.mit.edu	37	19	1372987	1372987	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3248300	3248300	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3248300	3248300	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC2	4606	broad.mit.edu	37	19	50958926	50958926	+	Intron	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC2	4606	broad.mit.edu	37	19	50958926	50958926	+	Intron	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108117506	108117506	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108117506	108117506	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171260754	171260754	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171260754	171260754	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47463534	47463534	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47566513	47566513	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47463534	47463534	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47566513	47566513	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171607974	171607974	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171607974	171607974	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95069721	95069721	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95069721	95069721	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2021510	2021510	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2044147	2044147	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2021510	2021510	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2044147	2044147	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAB2	4665	broad.mit.edu	37	12	57485446	57485446	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAB2	4665	broad.mit.edu	37	12	57485446	57485446	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145457361	145457361	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145457361	145457361	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160326673	160326673	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160326673	160326673	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161180318	161180318	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161180318	161180318	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152382515	152382515	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152382515	152382515	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBID	84807	broad.mit.edu	37	19	36387872	36387872	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBID	84807	broad.mit.edu	37	19	36387872	36387872	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIZ	64332	broad.mit.edu	37	3	101568463	101568463	+	5'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIZ	64332	broad.mit.edu	37	3	101568463	101568463	+	5'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51243771	51243771	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51243771	51243771	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN1	79570	broad.mit.edu	37	1	31656885	31656885	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN1	79570	broad.mit.edu	37	1	31656885	31656885	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC4	58484	broad.mit.edu	37	2	32476218	32476218	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC4	58484	broad.mit.edu	37	2	32476218	32476218	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56421916	56421916	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56423822	56423822	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56421916	56421916	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56423822	56423822	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15177202	15177202	+	Intron	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC3L	64318	broad.mit.edu	37	10	96109748	96109748	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	73012884	73012884	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	73012884	73012884	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPM3	10360	broad.mit.edu	37	10	103542607	103542607	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPM3	10360	broad.mit.edu	37	10	103542607	103542607	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A2	4929	broad.mit.edu	37	2	157182172	157182172	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A2	4929	broad.mit.edu	37	2	157182172	157182172	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115356917	115356917	+	Silent	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115356917	115356917	+	Silent	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107866076	107866076	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107866076	107866076	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176709697	176709697	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176709697	176709697	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603347	5603347	+	5'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603347	5603347	+	5'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102337309	102337309	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102337309	102337309	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24885566	24885566	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24885566	24885566	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2B	29989	broad.mit.edu	37	9	136081468	136081468	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123556010	123556010	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123556010	123556010	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78399348	78399348	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78399348	78399348	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161976070	161976070	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161976070	161976070	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A2	341276	broad.mit.edu	37	11	6891249	6891249	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A2	341276	broad.mit.edu	37	11	6891249	6891249	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695027	247695027	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695038	247695038	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695027	247695027	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695038	247695038	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247581	248247581	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247581	248247581	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D5	219875	broad.mit.edu	37	11	123810710	123810710	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D5	219875	broad.mit.edu	37	11	123810710	123810710	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22369024	22369024	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22369051	22369051	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22369024	22369024	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22369051	22369051	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22332646	22332646	+	5'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22332646	22332646	+	5'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52M1	119772	broad.mit.edu	37	11	4566472	4566472	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52M1	119772	broad.mit.edu	37	11	4566472	4566472	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275598	58275598	+	5'Flank	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275598	58275598	+	5'Flank	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158736422	158736422	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158736422	158736422	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H1	219469	broad.mit.edu	37	11	56057871	56057871	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H1	219469	broad.mit.edu	37	11	56057871	56057871	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861219	55861219	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48921695	48921695	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48921695	48921695	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTC	5009	broad.mit.edu	37	X	38271301	38271301	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTC	5009	broad.mit.edu	37	X	38271301	38271301	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26703817	26703817	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26703817	26703817	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7A	161725	broad.mit.edu	37	15	32059877	32059877	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25671157	25671157	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25671157	25671157	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163735809	163735809	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163735809	163735809	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2B	389860	broad.mit.edu	37	X	55104034	55104034	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2B	389860	broad.mit.edu	37	X	55104034	55104034	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK4	10298	broad.mit.edu	37	19	39669327	39669327	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9546928	9546928	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9546928	9546928	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169611777	169611777	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169611777	169611777	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52643704	52643704	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52643704	52643704	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91715180	91715180	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91715180	91715180	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH19	57526	broad.mit.edu	37	X	99605775	99605775	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH19	57526	broad.mit.edu	37	X	99605775	99605775	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140589383	140589383	+	Missense_Mutation	SNP	A	T	T	rs147813756		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140589383	140589383	+	Missense_Mutation	SNP	A	T	T	rs147813756		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537229	140537229	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537229	140537229	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140475340	140475340	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140475340	140475340	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140736276	140736276	+	Silent	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140736276	140736276	+	Silent	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165806329	165806329	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165806329	165806329	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57326123	57326123	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57326123	57326123	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111672953	111672953	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R1	5295	broad.mit.edu	37	5	67589621	67589621	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R1	5295	broad.mit.edu	37	5	67589621	67589621	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8794155	8794155	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8794155	8794155	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7988040	7988040	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7988040	7988040	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM3	83394	broad.mit.edu	37	17	6371812	6371812	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22210425	22210425	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22210425	22210425	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25144756	25144756	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102054421	102054421	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102054421	102054421	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKN2	5586	broad.mit.edu	37	1	89270578	89270578	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKN2	5586	broad.mit.edu	37	1	89270578	89270578	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131948881	131948881	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131948881	131948881	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB1	5364	broad.mit.edu	37	3	48463485	48463485	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB1	5364	broad.mit.edu	37	3	48463485	48463485	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMA3	29944	broad.mit.edu	37	X	152226785	152226785	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMA3	29944	broad.mit.edu	37	X	152226785	152226785	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86305001	86305001	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86305001	86305001	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57877298	57877298	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57877298	57877298	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3D	661	broad.mit.edu	37	8	22107690	22107690	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3D	661	broad.mit.edu	37	8	22107690	22107690	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99142345	99142345	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99142345	99142345	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14542880	14542880	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14542880	14542880	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39379533	39379533	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39379533	39379533	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146070557	146070557	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5B	5526	broad.mit.edu	37	11	64693486	64693486	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47276591	47276591	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47276591	47276591	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48767902	48767902	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48767902	48767902	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR15	222171	broad.mit.edu	37	7	29605982	29605982	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR15	222171	broad.mit.edu	37	7	29605982	29605982	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228004870	228004870	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228004870	228004870	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139218197	139218197	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139218197	139218197	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43698997	43698997	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43698997	43698997	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23738319	23738319	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23738319	23738319	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87622342	87622342	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87622342	87622342	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120714600	120714600	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120714600	120714600	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP2	5822	broad.mit.edu	37	21	45527338	45527338	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP2	5822	broad.mit.edu	37	21	45527338	45527338	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135809941	135809941	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135809941	135809941	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080666	103080666	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080666	103080666	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP1	10635	broad.mit.edu	37	12	4657319	4657319	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP1	10635	broad.mit.edu	37	12	4657319	4657319	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22197545	22197545	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22197545	22197545	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP7	5931	broad.mit.edu	37	X	16871023	16871023	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP7	5931	broad.mit.edu	37	X	16871023	16871023	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR1	23186	broad.mit.edu	37	14	103181058	103181058	+	Intron	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCVRN	5957	broad.mit.edu	37	17	9804303	9804303	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCVRN	5957	broad.mit.edu	37	17	9804303	9804303	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79314096	79314096	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79314096	79314096	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103322555	103322555	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103417122	103417122	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103322555	103322555	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103417122	103417122	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERGL	79785	broad.mit.edu	37	12	18237478	18237478	+	Missense_Mutation	SNP	C	T	T	rs61757396	byFrequency;by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERGL	79785	broad.mit.edu	37	12	18237478	18237478	+	Missense_Mutation	SNP	C	T	T	rs61757396	byFrequency;by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101065202	101065202	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101065202	101065202	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDF2	79651	broad.mit.edu	37	17	74473847	74473847	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDF2	79651	broad.mit.edu	37	17	74473847	74473847	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104930687	104930687	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105025815	105025815	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104930687	104930687	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105025815	105025815	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66099844	66099844	+	Missense_Mutation	SNP	G	A	A	rs3181770		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66099844	66099844	+	Missense_Mutation	SNP	G	A	A	rs3181770		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144B	255488	broad.mit.edu	37	6	18457369	18457369	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144B	255488	broad.mit.edu	37	6	18457369	18457369	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11448269	11448270	+	Intron	DNP	GA	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11448269	11448270	+	Intron	DNP	GA	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38176772	38176772	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38176772	38176772	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113334281	113334281	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113334281	113334281	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150337348	150337348	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150337348	150337348	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA3	6197	broad.mit.edu	37	X	20185604	20185604	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA3	6197	broad.mit.edu	37	X	20185604	20185604	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159573154	159573154	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159573154	159573154	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38942303	38942303	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38942303	38942303	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237753866	237753866	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237982323	237982323	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237753866	237753866	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237982323	237982323	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33765371	33765371	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7	6278	broad.mit.edu	37	1	153430323	153430323	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7	6278	broad.mit.edu	37	1	153430323	153430323	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200137490	200137490	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200137490	200137490	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML1	6322	broad.mit.edu	37	X	17771520	17771520	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML1	6322	broad.mit.edu	37	X	17771520	17771520	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCBP2	27111	broad.mit.edu	37	20	1294131	1294131	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCBP2	27111	broad.mit.edu	37	20	1294131	1294131	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169559339	169559339	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169559339	169559339	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84666213	84666213	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84666213	84666213	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA10	51156	broad.mit.edu	37	14	94756668	94756668	+	Missense_Mutation	SNP	C	A	A	rs143859072	byFrequency	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA10	51156	broad.mit.edu	37	14	94756668	94756668	+	Missense_Mutation	SNP	C	A	A	rs143859072	byFrequency	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61310721	61310721	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61310721	61310721	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPC	6440	broad.mit.edu	37	8	22019917	22019917	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK196	84197	broad.mit.edu	37	8	42977285	42977285	+	Silent	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK196	84197	broad.mit.edu	37	8	42977285	42977285	+	Silent	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM2	357	broad.mit.edu	37	X	9859207	9859207	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM2	357	broad.mit.edu	37	X	9859207	9859207	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH2	6478	broad.mit.edu	37	3	150460021	150460021	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH2	6478	broad.mit.edu	37	3	150460021	150460021	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51630545	51630545	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51630545	51630545	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPD	128646	broad.mit.edu	37	20	1538104	1538104	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61597059	61597059	+	Frame_Shift_Del	DEL	T	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61597059	61597059	+	Frame_Shift_Del	DEL	T	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35313759	35313759	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35313759	35313759	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A12	8604	broad.mit.edu	37	2	172693926	172693926	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A37	51312	broad.mit.edu	37	8	23425712	23425712	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A37	51312	broad.mit.edu	37	8	23425712	23425712	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A42	284439	broad.mit.edu	37	19	19215725	19215725	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A42	284439	broad.mit.edu	37	19	19215725	19215725	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103038575	103038575	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103038575	103038575	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85438235	85438235	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85438235	85438235	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9998467	9998467	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9998467	9998467	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32896597	32896597	+	5'Flank	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32896641	32896641	+	5'Flank	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32896597	32896597	+	5'Flank	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32896641	32896641	+	5'Flank	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A2	6530	broad.mit.edu	37	16	55729083	55729083	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A2	6530	broad.mit.edu	37	16	55729083	55729083	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A8	6535	broad.mit.edu	37	X	152958581	152958581	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A8	6535	broad.mit.edu	37	X	152958581	152958581	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40388007	40388007	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40388007	40388007	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103125492	103125492	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103125492	103125492	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4A1	28231	broad.mit.edu	37	20	61297622	61297622	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84454347	84454347	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84454347	84454347	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144903883	144903883	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144903883	144903883	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLURP1	57152	broad.mit.edu	37	8	143822670	143822670	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLURP1	57152	broad.mit.edu	37	8	143822670	143822670	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45741301	45741301	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45741301	45741301	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18839341	18839341	+	Intron	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18839341	18839341	+	Intron	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCA	6622	broad.mit.edu	37	4	90650499	90650499	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCA	6622	broad.mit.edu	37	4	90650499	90650499	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-22	767600	broad.mit.edu	37	14	101449283	101449283	+	RNA	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-22	767600	broad.mit.edu	37	14	101449283	101449283	+	RNA	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPA	6626	broad.mit.edu	37	19	41263354	41263354	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPA	6626	broad.mit.edu	37	19	41263354	41263354	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51664632	51664632	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51664632	51664632	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX10	29887	broad.mit.edu	37	7	26400636	26400636	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX10	29887	broad.mit.edu	37	7	26400636	26400636	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIN4	139886	broad.mit.edu	37	X	62570685	62570685	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIN4	139886	broad.mit.edu	37	X	62570685	62570685	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41008664	41008664	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41008664	41008664	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC1	10558	broad.mit.edu	37	9	94794917	94794917	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC1	10558	broad.mit.edu	37	9	94794917	94794917	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153048494	153048494	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153048494	153048494	+	Silent	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149512183	149512183	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48054602	48054602	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48054602	48054602	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52673659	52673659	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52673659	52673659	+	3'UTR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC6	30815	broad.mit.edu	37	9	130649020	130649020	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC6	30815	broad.mit.edu	37	9	130649020	130649020	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA2	8128	broad.mit.edu	37	15	92977458	92977459	+	Intron	INS	-	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1220640	1220640	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1220640	1220640	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23751823	23751823	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23751823	23751823	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48873794	48873794	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48873794	48873794	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147588364	147588364	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147588364	147588364	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113173762	113173762	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113173762	113173762	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10898397	10898397	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10898397	10898397	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152577926	152577926	+	Intron	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152577926	152577926	+	Intron	SNP	T	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT12	91683	broad.mit.edu	37	11	66807645	66807645	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT12	91683	broad.mit.edu	37	11	66807645	66807645	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT17	51760	broad.mit.edu	37	16	19236108	19236108	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT17	51760	broad.mit.edu	37	16	19236108	19236108	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79679569	79679569	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79679569	79679569	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150463279	150463279	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150463279	150463279	+	Intron	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19168188	19168188	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19168188	19168188	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN3	128387	broad.mit.edu	37	1	212976082	212976082	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN3	128387	broad.mit.edu	37	1	212976082	212976082	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38046205	38046205	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38046205	38046205	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG4	9238	broad.mit.edu	37	7	45139939	45139939	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG4	9238	broad.mit.edu	37	7	45139939	45139939	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114823174	114823174	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114823174	114823174	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL5	340543	broad.mit.edu	37	X	102529326	102529326	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL5	340543	broad.mit.edu	37	X	102529326	102529326	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD2	8463	broad.mit.edu	37	19	49844710	49844710	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD2	8463	broad.mit.edu	37	19	49844710	49844710	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27212622	27212622	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27212622	27212622	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13A	56157	broad.mit.edu	37	X	104463890	104463890	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13A	56157	broad.mit.edu	37	X	104463890	104463890	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56738951	56738951	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56738951	56738951	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX264	51368	broad.mit.edu	37	3	51737635	51737635	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX264	51368	broad.mit.edu	37	3	51737635	51737635	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP1	7027	broad.mit.edu	37	13	114294584	114294584	+	3'UTR	SNP	G	A	A	rs150466630		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP1	7027	broad.mit.edu	37	13	114294584	114294584	+	3'UTR	SNP	G	A	A	rs150466630		TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122840877	122840877	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153539066	153539066	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153539066	153539066	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM171	134285	broad.mit.edu	37	5	72419665	72419665	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM171	134285	broad.mit.edu	37	5	72419665	72419665	+	Silent	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101308647	101308647	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101308647	101308647	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117810558	117810558	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117810558	117810558	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP3	7128	broad.mit.edu	37	6	138197057	138197057	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP3	7128	broad.mit.edu	37	6	138197057	138197057	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60028842	60028842	+	Intron	SNP	G	T	T	rs76477458	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60028842	60028842	+	Intron	SNP	G	T	T	rs76477458	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF18	8784	broad.mit.edu	37	1	1139804	1139804	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF18	8784	broad.mit.edu	37	1	1139804	1139804	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122078406	122078406	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122078406	122078406	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX3	27324	broad.mit.edu	37	16	52502441	52502441	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX3	27324	broad.mit.edu	37	16	52502441	52502441	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72335413	72335413	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72335413	72335413	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38320680	38320680	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38320680	38320680	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR2	90121	broad.mit.edu	37	X	54471045	54471045	+	3'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179648491	179648491	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179648491	179648491	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93939	93939	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93939	93939	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1	55253	broad.mit.edu	37	7	66474559	66474559	+	Intron	DEL	G	-	-	rs4717339	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1	55253	broad.mit.edu	37	7	66474559	66474559	+	Intron	DEL	G	-	-	rs4717339	by1000genomes	TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3B	84959	broad.mit.edu	37	11	122666894	122666894	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3B	84959	broad.mit.edu	37	11	122666894	122666894	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN2	29978	broad.mit.edu	37	X	56591819	56591819	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN2	29978	broad.mit.edu	37	X	56591819	56591819	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39505958	39505958	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39505958	39505958	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128890558	128890558	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128890558	128890558	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35957471	35957471	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35957471	35957471	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216348557	216348557	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216348557	216348557	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP38	84640	broad.mit.edu	37	4	144124648	144124648	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP38	84640	broad.mit.edu	37	4	144124648	144124648	+	Silent	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144758660	144758660	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	36727834	36727834	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38965093	38965093	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46213076	46213076	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57427732	57427732	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107608950	107608950	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110659671	110659671	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	26027034	26027034	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27912539	27912539	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48347481	48347481	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49329449	49329449	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51426210	51426210	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55482364	55482364	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56217000	56217000	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56217002	56217002	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89631575	89631575	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90015928	90015928	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90016343	90016343	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17142113	17142113	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33607899	33607899	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63397359	63397359	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68430168	68430168	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80623041	80623041	+	IGR	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19240040	19240040	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19412016	19412016	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19475815	19475815	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	21631779	21631779	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45335238	45335238	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	62331124	62331124	+	IGR	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60164911	60164911	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32443084	32443084	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33410728	33410728	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20420355	20420355	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	49580227	49580227	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52780557	52780557	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67703488	67703488	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69008948	69008948	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14629940	14629940	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14706326	14706326	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	29547168	29547168	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68097735	68097735	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20243288	20243288	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20874365	20874365	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148853870	148853870	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532545	187532545	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238431869	238431869	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242222724	242222724	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	97145186	97145186	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	25079986	25079986	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898954	14898954	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16350284	16350284	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16940729	16940729	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	21424272	21424272	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130751705	130751705	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	189093028	189093028	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	47918245	47918245	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49143046	49143046	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	85542359	85542359	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91801171	91801171	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	105918038	105918038	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190395917	190395917	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	33012662	33012662	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69578099	69578099	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70274622	70274622	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	168043646	168043646	+	IGR	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	179513473	179513473	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	35946419	35946419	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	52781921	52781921	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	91139645	91139645	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104467032	104467032	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106114527	106114527	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64325940	64325940	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803647	66803647	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10516305	10516305	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159026017	159026017	+	IGR	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57316536	57316536	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766712	9766713	+	IGR	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36952684	36952684	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	5706880	5706880	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62115664	62115664	+	IGR	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801290	88801290	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89497879	89497879	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	96416200	96416200	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69510995	69510995	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120337596	120337596	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127262082	127262082	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	133407614	133407615	+	IGR	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135379049	135379049	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25047807	25047807	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27536074	27536075	+	IGR	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5224182	5224182	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65176474	65176474	+	IGR	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82130766	82130766	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89545007	89545007	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13478361	13478361	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	36727834	36727834	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38965093	38965093	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46213076	46213076	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57427732	57427732	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107608950	107608950	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110659671	110659671	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	26027034	26027034	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27912539	27912539	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48347481	48347481	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49329449	49329449	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51426210	51426210	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55482364	55482364	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56217000	56217000	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56217002	56217002	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89631575	89631575	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90015928	90015928	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90016343	90016343	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33607899	33607899	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63397359	63397359	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68430168	68430168	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80623041	80623041	+	IGR	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19240040	19240040	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19412016	19412016	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19475815	19475815	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	21631779	21631779	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45335238	45335238	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60164911	60164911	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33410728	33410728	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20420355	20420355	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25980489	25980489	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	49580227	49580227	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52780557	52780557	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67703488	67703488	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69008948	69008948	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14629940	14629940	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14706326	14706326	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	29547168	29547168	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68097735	68097735	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20243288	20243288	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20874365	20874365	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148853870	148853870	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532545	187532545	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238431869	238431869	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242222724	242222724	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	97145186	97145186	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	25079986	25079986	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898954	14898954	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16350284	16350284	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16940729	16940729	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	21424272	21424272	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130751705	130751705	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	189093028	189093028	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	47918245	47918245	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49143046	49143046	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	85542359	85542359	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91801171	91801171	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	105918038	105918038	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190395917	190395917	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	33012662	33012662	+	IGR	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69578099	69578099	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70223279	70223279	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70274622	70274622	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	168043646	168043646	+	IGR	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	51227388	51227388	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	52781921	52781921	+	IGR	SNP	A	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	91139645	91139645	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106114527	106114527	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64325940	64325940	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803647	66803647	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10516305	10516305	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159026017	159026017	+	IGR	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766712	9766713	+	IGR	DNP	CC	AA	AA			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36952684	36952684	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	5706880	5706880	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62115664	62115664	+	IGR	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	84206338	84206338	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801290	88801290	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89497879	89497879	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	96416200	96416200	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69510995	69510995	+	IGR	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120337596	120337596	+	IGR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127262082	127262082	+	IGR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	133407614	133407615	+	IGR	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135379049	135379049	+	IGR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25047807	25047807	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27536074	27536075	+	IGR	DNP	GG	TT	TT			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5224182	5224182	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65176474	65176474	+	IGR	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82130766	82130766	+	IGR	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13478361	13478361	+	IGR	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70816778	70816778	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70816778	70816778	+	Intron	SNP	C	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37035875	37035875	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37035875	37035875	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33B	26276	broad.mit.edu	37	15	91549584	91549584	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33B	26276	broad.mit.edu	37	15	91549584	91549584	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64193151	64193151	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64193151	64193151	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK3	51231	broad.mit.edu	37	19	50482553	50482553	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK3	51231	broad.mit.edu	37	19	50482553	50482553	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85715978	85715978	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85715978	85715978	+	Intron	SNP	T	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR46	9277	broad.mit.edu	37	6	33255771	33255771	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113114653	113114653	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113114653	113114653	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36581184	36581184	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54339910	54339910	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54339910	54339910	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1952804	1952804	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1952804	1952804	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10093091	10093091	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10093091	10093091	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168107287	168107287	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168107287	168107287	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100455996	100455996	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100455996	100455996	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21335384	21335384	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21335384	21335384	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF7	285525	broad.mit.edu	37	4	44638039	44638039	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46543921	46543922	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1L	92092	broad.mit.edu	37	7	138713295	138713295	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP41	286128	broad.mit.edu	37	8	144331922	144331922	+	5'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP41	286128	broad.mit.edu	37	8	144331922	144331922	+	5'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70464286	70464286	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70464286	70464286	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF107	51427	broad.mit.edu	37	7	64167704	64167704	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF107	51427	broad.mit.edu	37	7	64167704	64167704	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF263	10127	broad.mit.edu	37	16	3334041	3334041	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF263	10127	broad.mit.edu	37	16	3334041	3334041	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF286B	729288	broad.mit.edu	37	17	18584165	18584165	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF286B	729288	broad.mit.edu	37	17	18584165	18584165	+	Intron	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49672667	49672667	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49672667	49672667	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57193647	57193647	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57193647	57193647	+	Intron	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF493	284443	broad.mit.edu	37	19	21608424	21608424	+	3'UTR	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF493	284443	broad.mit.edu	37	19	21608424	21608424	+	3'UTR	DEL	G	-	-			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30934361	30934361	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30934361	30934361	+	Intron	SNP	T	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	53451	53451	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	53451	53451	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF678	339500	broad.mit.edu	37	1	227843491	227843491	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF678	339500	broad.mit.edu	37	1	227843491	227843491	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57528793	57528793	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57528793	57528793	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP3	7784	broad.mit.edu	37	7	76063014	76063014	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP3	7784	broad.mit.edu	37	7	76063014	76063014	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM3	140831	broad.mit.edu	37	20	44505453	44505453	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM3	140831	broad.mit.edu	37	20	44505453	44505453	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134628239	134628239	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	113661726	113661726	+	RNA	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102318216	102318216	+	5'Flank	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	28996954	28996954	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90161652	90161652	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90161657	90161657	+	3'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	76495072	76495072	+	RNA	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	38709705	38709705	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90249024	90249024	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374561	95374561	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166455	85166455	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142423708	142423708	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84675742	84675742	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134628239	134628239	+	Silent	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	113661726	113661726	+	RNA	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102318216	102318216	+	5'Flank	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	28996954	28996954	+	Intron	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90161652	90161652	+	3'UTR	SNP	C	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90161657	90161657	+	3'UTR	SNP	G	C	C			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	76495072	76495072	+	RNA	SNP	G	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	38709705	38709705	+	Silent	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90249024	90249024	+	Intron	SNP	A	G	G			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374561	95374561	+	RNA	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166455	85166455	+	Intron	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142423708	142423708	+	Intron	SNP	C	A	A			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84675742	84675742	+	3'UTR	SNP	G	T	T			TCGA-44-6776-01A-11D-1855-08	TCGA-44-6776-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
