Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	7714825	7714825	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	9027629	9027629	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2M	2	broad.mit.edu	37	12	9225254	9225254	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASDHPPT	60496	broad.mit.edu	37	11	105967474	105967474	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67149676	67149676	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215914396	215914396	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139905127	139905127	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94463473	94463473	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94510090	94510090	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA5	23461	broad.mit.edu	37	17	67309322	67309322	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67109547	67109547	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169781254	169781254	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179966	87179966	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87229544	87229544	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20721223	20721224	+	Nonsense_Mutation	DNP	GG	TT	TT	rs60403688	byFrequency;by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB8	11194	broad.mit.edu	37	7	150742373	150742373	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC10	89845	broad.mit.edu	37	6	43417772	43417772	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48256510	48256510	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48117862	48117862	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101594239	101594239	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183643372	183643372	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17474562	17474562	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22040803	22040803	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89052318	89052318	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119024758	119024758	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD10	55347	broad.mit.edu	37	3	111697944	111697944	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3	51225	broad.mit.edu	37	17	47299960	47299960	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM2	84448	broad.mit.edu	37	4	8010869	8010869	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148586668	148586668	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109644722	109644722	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD6	84320	broad.mit.edu	37	1	180257594	180257594	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31344625	31344625	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32365683	32365683	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61568583	61568583	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61571364	61571364	+	Missense_Mutation	SNP	G	T	T	rs141139841		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT6	641372	broad.mit.edu	37	14	74086211	74086211	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185697593	185697593	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20648142	20648142	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20487038	20487038	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20548547	20548547	+	3'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20556416	20556416	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81532992	81532992	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTC1	70	broad.mit.edu	37	15	35083397	35083397	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG1	71	broad.mit.edu	37	17	79479283	79479283	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL9	284382	broad.mit.edu	37	19	8808127	8808127	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN3	89	broad.mit.edu	37	11	66328121	66328121	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN4	81	broad.mit.edu	37	19	39138465	39138465	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT2	140625	broad.mit.edu	37	1	2939307	2939307	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42847081	42847081	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87737440	87737440	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106054599	106054599	+	RNA	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106091085	106091085	+	RNA	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106236505	106236505	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106236507	106236507	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106236948	106236948	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106552791	106552791	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106622005	106622005	+	RNA	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725536	106725536	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106733559	106733559	+	RNA	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106805314	106805314	+	RNA	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106974612	106974612	+	RNA	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106993699	106993699	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107012956	107012957	+	RNA	DNP	GG	TT	TT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062063	107062063	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38912024	38912024	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMDEC1	27299	broad.mit.edu	37	8	24255027	24255027	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33643550	33643550	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33649028	33649028	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33649046	33649046	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33751520	33751520	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS15	170689	broad.mit.edu	37	11	130343102	130343102	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43826486	43826486	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28315712	28315712	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64747170	64747170	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK5	203054	broad.mit.edu	37	8	145617269	145617269	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167791452	167791452	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167793718	167793718	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45743059	45743059	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7698241	7698241	+	Intron	SNP	G	T	T	rs112411265		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170083	49170083	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131826547	131826547	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31125054	31125054	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31126008	31126008	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1	116	broad.mit.edu	37	18	909687	909687	+	3'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100200544	100200544	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA1	134	broad.mit.edu	37	1	203097872	203097872	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA3	140	broad.mit.edu	37	1	112042824	112042824	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRH	141	broad.mit.edu	37	3	119304957	119304957	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1B	147	broad.mit.edu	37	5	159398780	159398780	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44153462	44153462	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEN	64782	broad.mit.edu	37	15	89169735	89169735	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148679017	148679017	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236706323	236706323	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGFG2	3268	broad.mit.edu	37	7	100151090	100151090	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGFG2	3268	broad.mit.edu	37	7	100159952	100159952	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGRN	375790	broad.mit.edu	37	1	957543	957543	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGRN	375790	broad.mit.edu	37	1	970603	970603	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGRN	375790	broad.mit.edu	37	1	979000	979000	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247059106	247059106	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL1	10768	broad.mit.edu	37	1	110561046	110561046	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62287559	62287559	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62301100	62301100	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIRE	326	broad.mit.edu	37	21	45707078	45707078	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4772150	4772150	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96858456	96858456	+	5'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96945030	96945030	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134221591	134221591	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137792391	137792391	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125828744	125828744	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH7A1	501	broad.mit.edu	37	5	125929166	125929166	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDOC	230	broad.mit.edu	37	17	26902193	26902193	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29416528	29416528	+	Missense_Mutation	SNP	G	T	T	rs139039449		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29450489	29450489	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29917834	29917834	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMELX	265	broad.mit.edu	37	X	11316746	11316746	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112058742	112058742	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY1A	276	broad.mit.edu	37	1	104297234	104297234	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT1	284	broad.mit.edu	37	8	108315513	108315513	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL5	253935	broad.mit.edu	37	11	101762183	101762183	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL5	253935	broad.mit.edu	37	11	101762327	101762327	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41577265	41577265	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61835269	61835269	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54517785	54517785	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKHD1	54882	broad.mit.edu	37	5	139851881	139851881	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	92015853	92015853	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKK1	255239	broad.mit.edu	37	11	113264195	113264195	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27303640	27303640	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD27	84079	broad.mit.edu	37	19	33113555	33113555	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37431003	37431003	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD42	338699	broad.mit.edu	37	11	82938914	82938914	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD56	345079	broad.mit.edu	37	4	77817745	77817745	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO8	57719	broad.mit.edu	37	19	17438406	17438406	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC3	8639	broad.mit.edu	37	17	41004452	41004452	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99093376	99093376	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA2	336	broad.mit.edu	37	1	161192794	161192794	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227105	21227105	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227527	21227527	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21230966	21230966	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234459	21234459	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21246575	21246575	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL3	80833	broad.mit.edu	37	22	36556806	36556806	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154296832	154296832	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP6	363	broad.mit.edu	37	12	50369313	50369313	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7	364	broad.mit.edu	37	9	33387159	33387159	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF2	10564	broad.mit.edu	37	20	47588817	47588817	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGLU1	55082	broad.mit.edu	37	13	107209283	107209283	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148796291	148796291	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP12	94134	broad.mit.edu	37	10	32098205	32098205	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	144245132	144245132	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP19	84986	broad.mit.edu	37	10	98995163	98995163	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24874021	24874021	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69009461	69009461	+	Intron	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69046344	69046344	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187695	11187695	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1828334	1828334	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156911551	156911551	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13A	392509	broad.mit.edu	37	X	100228626	100228626	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	2999126	2999126	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB18	401036	broad.mit.edu	37	2	237150088	237150088	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100964152	100964152	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMT	438	broad.mit.edu	37	X	1743365	1743365	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNA1	439	broad.mit.edu	37	19	12856311	12856311	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNA1	439	broad.mit.edu	37	19	12856385	12856385	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197069979	197069979	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96795703	96795703	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176983814	176983814	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119737583	119737583	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119737608	119737608	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25991666	25991666	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124333437	124333437	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161736161	161736161	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4D	84971	broad.mit.edu	37	19	10657466	10657466	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A3	79572	broad.mit.edu	37	3	194169424	194169424	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10442757	10442757	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5G2	517	broad.mit.edu	37	12	54063612	54063612	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54714394	54714394	+	Nonsense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154315513	154315513	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRIP	84126	broad.mit.edu	37	3	48501642	48501642	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR1A	552	broad.mit.edu	37	12	63543872	63543873	+	Missense_Mutation	DNP	CG	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT1	11041	broad.mit.edu	37	11	66114503	66114503	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047424	11047424	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11049609	11049609	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69759244	69759244	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BASP1	10409	broad.mit.edu	37	5	17275961	17275961	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT1	7919	broad.mit.edu	37	6	31500659	31500659	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT1	7919	broad.mit.edu	37	6	31514348	31514357	+	5'UTR	DEL	TGGCCGATGC	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L2	23215	broad.mit.edu	37	1	171560734	171560734	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1A	11177	broad.mit.edu	37	14	35234172	35234172	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR1	9564	broad.mit.edu	37	16	75263990	75263990	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR1	9564	broad.mit.edu	37	16	75268814	75268814	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52601742	52601742	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165548187	165548187	+	Missense_Mutation	SNP	G	T	T	rs114706984	byFrequency;by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60689034	60689035	+	Missense_Mutation	DNP	GG	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9L	283149	broad.mit.edu	37	11	118771514	118771514	+	Missense_Mutation	SNP	C	A	A	rs150094487		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599485	136599485	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136600958	136600958	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112065384	112065384	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23524070	23524070	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18192213	18192213	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST3	144453	broad.mit.edu	37	12	70072552	70072552	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152772618	152772618	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60558294	60558294	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127806096	127806096	+	3'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC3	330	broad.mit.edu	37	11	102201833	102201838	+	In_Frame_Del	DEL	AAAACA	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC3	330	broad.mit.edu	37	11	102201846	102201846	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLNK	29760	broad.mit.edu	37	10	97983467	97983467	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22065020	22065020	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13583842	13583842	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13604728	13604728	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOLA1	51027	broad.mit.edu	37	1	149871606	149871606	+	5'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL1	80341	broad.mit.edu	37	20	31601738	31601738	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41276130	41276130	+	5'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD4	23476	broad.mit.edu	37	19	15360012	15360012	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSDC1	55108	broad.mit.edu	37	1	32843761	32843761	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSG	682	broad.mit.edu	37	19	580362	580362	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13427269	13427269	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108012033	108012033	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD8	284697	broad.mit.edu	37	1	92554427	92554427	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1B	701	broad.mit.edu	37	15	40462321	40462321	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111431838	111431838	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf88	80007	broad.mit.edu	37	10	124712588	124712588	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf96	374355	broad.mit.edu	37	10	118137885	118137885	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf65	160140	broad.mit.edu	37	11	108256708	108256708	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf66	220004	broad.mit.edu	37	11	61254452	61254452	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf80	79703	broad.mit.edu	37	11	66605891	66605891	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf83	790955	broad.mit.edu	37	11	62439292	62439292	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112622024	112622024	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112654893	112654893	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf56	115749	broad.mit.edu	37	12	64668647	64668647	+	Intron	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95912351	95912351	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf68	283600	broad.mit.edu	37	14	100795129	100795129	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf23	90417	broad.mit.edu	37	15	40675010	40675010	+	5'UTR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24921212	24921212	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923342	24923342	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24924327	24924327	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100331834	100331834	+	RNA	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf46	124783	broad.mit.edu	37	17	43332457	43332457	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf46	124783	broad.mit.edu	37	17	43333141	43333141	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf58	284018	broad.mit.edu	37	17	65989093	65989093	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf74	201243	broad.mit.edu	37	17	7329271	7329271	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf62	284274	broad.mit.edu	37	18	73139540	73139540	+	5'UTR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf34	255193	broad.mit.edu	37	19	1954120	1954120	+	5'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1GALT1	56913	broad.mit.edu	37	7	7283162	7283162	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QC	714	broad.mit.edu	37	1	22973864	22973864	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244643149	244643149	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf111	284680	broad.mit.edu	37	1	162345014	162345015	+	Intron	DNP	GG	TT	TT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169388190	169388190	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179398751	179398751	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170940798	170940798	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75036735	75036735	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75037806	75037806	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75072430	75072430	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf175	374977	broad.mit.edu	37	1	55148376	55148376	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185143897	185143897	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf51	148523	broad.mit.edu	37	1	150256785	150256785	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35740727	35740727	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf152	140894	broad.mit.edu	37	20	34611601	34611601	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31671451	31671451	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf85	128602	broad.mit.edu	37	20	56728608	56728608	+	Missense_Mutation	SNP	G	T	T	rs16984945	byFrequency;by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf33	8209	broad.mit.edu	37	21	45557284	45557284	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74842036	74842036	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3AR1	719	broad.mit.edu	37	12	8211786	8211786	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf39	84892	broad.mit.edu	37	3	43121603	43121603	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113486350	113486350	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113539234	113539234	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81309141	81309141	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf50	389197	broad.mit.edu	37	4	5975560	5975560	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123753595	123753595	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf36	285600	broad.mit.edu	37	5	93855925	93855926	+	Intron	DNP	CC	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf39	389289	broad.mit.edu	37	5	43040126	43040126	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf40	408263	broad.mit.edu	37	5	156769909	156769910	+	Frame_Shift_Ins	INS	-	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf204	387119	broad.mit.edu	37	6	118805031	118805031	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf222	389384	broad.mit.edu	37	6	36291345	36291345	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf28B	221960	broad.mit.edu	37	7	6864440	6864440	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120876855	120876855	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120906183	120906183	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf63	79846	broad.mit.edu	37	7	89874756	89874756	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf64	84060	broad.mit.edu	37	7	92161862	92161862	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf34	116328	broad.mit.edu	37	8	69730552	69730552	+	3'UTR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf46	254778	broad.mit.edu	37	8	67408724	67408724	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf74	203076	broad.mit.edu	37	8	10555378	10555378	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf79	57604	broad.mit.edu	37	8	12878740	12878740	+	Silent	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39306837	39306837	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf5	23731	broad.mit.edu	37	9	111826617	111826617	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf85	138241	broad.mit.edu	37	9	74526692	74526692	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50008472	50008472	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86158162	86158162	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86163132	86163132	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAB39L	81617	broad.mit.edu	37	13	49956900	49956900	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24459705	24459705	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65120489	65120489	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140952664	140952664	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181620524	181620524	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181680202	181680202	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181702190	181702190	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181725949	181725949	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181754678	181754678	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181754967	181754967	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49070747	49070747	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40068257	40068257	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81746367	81746368	+	Frame_Shift_Del	DEL	AT	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54871258	54871258	+	Splice_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27448142	27448142	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54115109	54115109	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12870690	12870690	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2N1	55450	broad.mit.edu	37	1	20810239	20810239	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7737720	7737720	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44144383	44144383	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN13	92291	broad.mit.edu	37	2	30953540	30953540	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110494367	110494367	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPRIN2	65981	broad.mit.edu	37	12	30883196	30883196	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75706545	75706545	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2984049	2984049	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASKIN1	57524	broad.mit.edu	37	16	2237336	2237336	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	122003851	122003851	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCAR1	55749	broad.mit.edu	37	10	70509542	70509542	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219874831	219874831	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC113	29070	broad.mit.edu	37	16	58293790	58293790	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC148	130940	broad.mit.edu	37	2	159107534	159107534	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC151	115948	broad.mit.edu	37	19	11531872	11531872	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28B	79140	broad.mit.edu	37	1	32669671	32669671	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC33	80125	broad.mit.edu	37	15	74623568	74623568	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC42	146849	broad.mit.edu	37	17	8647024	8647024	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC47	57003	broad.mit.edu	37	17	61829894	61829894	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32739563	32739563	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74B	91409	broad.mit.edu	37	2	130899608	130899608	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64119555	64119555	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC99	54908	broad.mit.edu	37	5	169028523	169028523	+	Missense_Mutation	SNP	G	T	T	rs143182474		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC99	54908	broad.mit.edu	37	5	169028583	169028583	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL13	6357	broad.mit.edu	37	17	32684724	32684724	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL4	6351	broad.mit.edu	37	17	34432800	34432800	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNL1	57018	broad.mit.edu	37	3	156866174	156866174	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT2	905	broad.mit.edu	37	2	135711659	135711659	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR4	1233	broad.mit.edu	37	3	32995815	32995815	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6B	10693	broad.mit.edu	37	17	33255014	33255014	+	3'UTR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158261151	158261151	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262139	158262139	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158152753	158152753	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158323885	158323885	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158326382	158326382	+	Splice_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35835872	35835872	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160811393	160811393	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD274	29126	broad.mit.edu	37	9	5465513	5465513	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2AP	23607	broad.mit.edu	37	6	47592011	47592011	+	3'UTR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LG	146894	broad.mit.edu	37	17	41931464	41931464	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD36	948	broad.mit.edu	37	7	80276204	80276204	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD36	948	broad.mit.edu	37	7	80276206	80276206	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3D	915	broad.mit.edu	37	11	118210166	118210166	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60890252	60890253	+	Intron	DNP	CC	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60739346	60739346	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD96	10225	broad.mit.edu	37	3	111368458	111368458	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD97	976	broad.mit.edu	37	19	14499643	14499643	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100963614	100963614	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100964459	100964459	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227228031	227228031	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91989846	91989846	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24505268	24505268	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64984775	64984775	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65032455	65032455	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21883081	21883081	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95201473	95201473	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473826	19473826	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19839113	19839113	+	Translation_Start_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59206437	59206437	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44841907	44841907	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73462102	73462102	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25543321	25543321	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25570121	25570121	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25572768	25572768	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25589629	25589629	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25616533	25616534	+	Intron	DNP	CA	AT	AT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60419857	60419857	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31302431	31302431	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63529815	63529815	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61688056	61688056	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61854978	61854978	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK12	51755	broad.mit.edu	37	17	37676281	37676281	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40037171	40037171	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP1	51654	broad.mit.edu	37	20	31958555	31958555	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP1	51654	broad.mit.edu	37	20	31982967	31982967	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN1C	1028	broad.mit.edu	37	11	2905952	2905952	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS1	1040	broad.mit.edu	37	4	85556555	85556555	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM19	56971	broad.mit.edu	37	19	45183600	45183600	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM4	1089	broad.mit.edu	37	19	42128180	42128180	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA3B	23436	broad.mit.edu	37	1	22310860	22310860	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46787142	46787142	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123877466	123877466	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117257992	117257992	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88465670	88465670	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	179981084	179981084	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERK	64781	broad.mit.edu	37	22	47087660	47087660	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR2	3080	broad.mit.edu	37	1	196919931	196919931	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196874477	196874477	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196881879	196881879	+	Nonsense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196965196	196965196	+	Missense_Mutation	SNP	T	A	A	rs143240067	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196967403	196967403	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196711029	196711029	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87796049	87796049	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB5	93659	broad.mit.edu	37	19	49547453	49547453	+	5'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB7	94027	broad.mit.edu	37	19	49558646	49558646	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50854444	50854444	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7814693	7814693	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L1	1116	broad.mit.edu	37	1	203153670	203153670	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHM	1121	broad.mit.edu	37	X	85158494	85158494	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109924659	109924659	+	Intron	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109964503	109964504	+	Intron	INS	-	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184104585	184104585	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB3	117286	broad.mit.edu	37	19	16284217	16284217	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIDEC	63924	broad.mit.edu	37	3	10042374	10042374	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIDEC	63924	broad.mit.edu	37	3	9911858	9911858	+	Missense_Mutation	SNP	G	T	T	rs145091411		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CINP	51550	broad.mit.edu	37	14	102825902	102825902	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33557609	33557609	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33558651	33558651	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143047529	143047529	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143047730	143047730	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10162868	10162868	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16356931	16356931	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12A	160364	broad.mit.edu	37	12	10133289	10133289	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC3A	10143	broad.mit.edu	37	16	78056549	78056549	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK1	1195	broad.mit.edu	37	2	201719310	201719310	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2P	1197	broad.mit.edu	37	7	23625071	23625071	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178030931	178030931	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140178589	140178589	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMAS	55907	broad.mit.edu	37	12	22208375	22208375	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM7	112616	broad.mit.edu	37	3	32491135	32491135	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP1	84735	broad.mit.edu	37	18	72247405	72247405	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA3	1261	broad.mit.edu	37	2	99013598	99013598	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6263036	6263036	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR1	10256	broad.mit.edu	37	1	26509049	26509049	+	Missense_Mutation	SNP	G	A	A	rs140239583	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21534583	21534583	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41123265	41123265	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41323782	41323782	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2967317	2967317	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146471330	146471330	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147092746	147092746	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147092781	147092781	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147259350	147259350	+	Splice_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	148080826	148080826	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	148112449	148112449	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76389295	76389295	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125281976	125281976	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7838353	7838353	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51204048	51204048	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103348790	103348790	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103352682	103352682	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103385723	103385723	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103444652	103444652	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103471712	103471712	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75839977	75839977	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71655287	71655287	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101806849	101806849	+	Splice_Site	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70850878	70850878	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70890392	70890392	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL20A1	57642	broad.mit.edu	37	20	61938933	61938933	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177676032	177676032	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86591549	86591549	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86621922	86621922	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86622021	86622022	+	Intron	INS	-	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189876477	189876477	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111156436	111156436	+	Intron	SNP	C	A	A	rs373463		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107840539	107840539	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137703108	137703108	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238244728	238244728	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130305379	130305379	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15499752	15499752	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD7	149951	broad.mit.edu	37	20	31292637	31292637	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD7	149951	broad.mit.edu	37	20	31294522	31294522	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47625771	47625771	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69011535	69011535	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO7	79585	broad.mit.edu	37	16	4458075	4458075	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX4I1	1327	broad.mit.edu	37	16	85838628	85838628	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130024348	130024348	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA5	93979	broad.mit.edu	37	7	130007240	130007240	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148562568	148562568	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPD	1362	broad.mit.edu	37	17	28711868	28711868	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPN1	1369	broad.mit.edu	37	10	101829324	101829324	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131624169	131624169	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211452604	211452604	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211464127	211464127	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211513207	211513207	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8607646	8607646	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CP	1356	broad.mit.edu	37	3	148926985	148926985	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197298196	197298196	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197398517	197398517	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197398720	197398720	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197404326	197404326	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197407898	197407898	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB2	286204	broad.mit.edu	37	9	126136903	126136903	+	Silent	SNP	C	A	A	rs148933240	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75898355	75898355	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152382557	152382557	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC2	200186	broad.mit.edu	37	1	153924738	153924738	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBA4	1413	broad.mit.edu	37	22	27021343	27021343	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGD	1421	broad.mit.edu	37	2	208986726	208986726	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYZ	1429	broad.mit.edu	37	1	75180340	75180340	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDA	8531	broad.mit.edu	37	12	10871718	10871718	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSE1L	1434	broad.mit.edu	37	20	47691870	47691870	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19297446	19297446	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43651081	43651081	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2944759	2944759	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34190095	34190095	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113317142	113317142	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113353818	113353818	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113392565	113392565	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN2	1447	broad.mit.edu	37	4	70823494	70823494	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1D	1453	broad.mit.edu	37	17	80211142	80211142	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1P	283106	broad.mit.edu	37	11	11373750	11373750	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST11	140880	broad.mit.edu	37	20	23433334	23433334	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120007678	120007678	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120008872	120008872	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120009270	120009270	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCF	10664	broad.mit.edu	37	16	67670753	67670753	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80875022	80875022	+	3'UTR	DEL	T	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68535271	68535271	+	Frame_Shift_Del	DEL	T	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11098738	11098738	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15770036	15770036	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSK	1513	broad.mit.edu	37	1	150771612	150771612	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117375213	117375213	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16941090	16941090	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16955835	16955835	+	Missense_Mutation	SNP	G	A	A	rs140983139	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUEDC1	404093	broad.mit.edu	37	17	55962528	55962528	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49019260	49019260	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR2	3579	broad.mit.edu	37	2	219000380	219000380	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYCS	54205	broad.mit.edu	37	7	25163541	25163541	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC1	1538	broad.mit.edu	37	X	83128556	83128556	+	Nonsense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC2	1539	broad.mit.edu	37	9	105767801	105767801	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74631744	74631744	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41455134	41455134	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41512853	41512853	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41522588	41522588	+	Silent	SNP	G	T	T	rs141626689		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C19	1557	broad.mit.edu	37	10	96602702	96602702	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96748758	96748758	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2E1	1571	broad.mit.edu	37	10	135346316	135346316	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP46A1	10858	broad.mit.edu	37	14	100182205	100182205	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4B1	1580	broad.mit.edu	37	1	47283692	47283692	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	16008282	16008282	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	16008286	16008286	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4V2	285440	broad.mit.edu	37	4	187131579	187131579	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D2HGDH	728294	broad.mit.edu	37	2	242689675	242689675	+	Silent	SNP	C	G	G	rs141524359		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM1	23002	broad.mit.edu	37	14	59757934	59757934	+	Splice_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124544764	124544764	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39393458	39393458	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59112625	59112625	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42815923	42815923	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27999046	27999046	+	Missense_Mutation	SNP	C	A	A	rs142810555		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L2	347442	broad.mit.edu	37	X	27766004	27766004	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155156835	155156835	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155219229	155219229	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155256183	155256183	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK2	166614	broad.mit.edu	37	4	151023641	151023641	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1A	9937	broad.mit.edu	37	10	115602144	115602144	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74594431	74594431	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95131209	95131209	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110574341	110574341	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110576332	110576332	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103908012	103908012	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169214843	169214843	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169232422	169232422	+	5'UTR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB114	245928	broad.mit.edu	37	6	49928016	49928016	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB118	117285	broad.mit.edu	37	20	29960763	29960763	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEK	7913	broad.mit.edu	37	6	18236636	18236636	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115138455	115138455	+	Nonsense_Mutation	SNP	C	A	A	rs146178653	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186015086	186015086	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55319740	55319740	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS9	10170	broad.mit.edu	37	2	169939978	169939978	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX16	8449	broad.mit.edu	37	6	30638278	30638278	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX36	170506	broad.mit.edu	37	3	154017577	154017577	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX40P1	653645	broad.mit.edu	37	17	58088452	58088452	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41599346	41599346	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISC1	27185	broad.mit.edu	37	1	231885540	231885540	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISC1	27185	broad.mit.edu	37	1	232144895	232144895	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKFZP434L187	26082	broad.mit.edu	37	15	30515900	30515900	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13357316	13357316	+	Missense_Mutation	SNP	C	A	A	rs150090193		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79593690	79593690	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101194827	101194827	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX6	1750	broad.mit.edu	37	7	96639050	96639050	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMP1	1758	broad.mit.edu	37	4	88583789	88583789	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT2	10655	broad.mit.edu	37	9	1056563	1056563	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTC2	63946	broad.mit.edu	37	19	42354262	42354262	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21639422	21639422	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21723603	21723604	+	Intron	INS	-	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21934680	21934680	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH12	201625	broad.mit.edu	37	3	57487119	57487120	+	Missense_Mutation	DNP	GG	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76435278	76435278	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13776646	13776646	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196834869	196834869	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11795289	11795289	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72287239	72287239	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB2	3300	broad.mit.edu	37	2	220147654	220147654	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB6	10049	broad.mit.edu	37	7	157151371	157151371	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB8	165721	broad.mit.edu	37	3	128181690	128181690	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183582905	183582905	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183622484	183622484	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNASE1L3	1776	broad.mit.edu	37	3	58178443	58178443	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94341979	94341979	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169101515	169101515	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	50824126	50824126	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK1	1796	broad.mit.edu	37	2	74783136	74783136	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY1	23033	broad.mit.edu	37	6	83828546	83828546	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOT1L	84444	broad.mit.edu	37	19	2222371	2222371	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116447425	116447425	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154684122	154684122	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35142703	35142703	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	63976267	63976267	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	63991538	63991538	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	64040973	64040973	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97658654	97658654	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98015157	98015157	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134010260	134010260	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105440265	105440265	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113283382	113283382	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29122774	29122774	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX1	1840	broad.mit.edu	37	12	113495973	113495973	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP10	11221	broad.mit.edu	37	1	221875811	221875811	+	Missense_Mutation	SNP	G	T	T	rs61757363		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP10	11221	broad.mit.edu	37	1	221912792	221912792	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP13	51207	broad.mit.edu	37	10	76857662	76857662	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP26	78986	broad.mit.edu	37	8	33451050	33451050	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167095342	167095342	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95442509	95442509	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95662087	95662087	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	102999623	102999623	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4711846	4711846	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYTN	391475	broad.mit.edu	37	2	207572137	207572137	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137813580	137813580	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158267169	158267169	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25715978	25715978	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43637772	43637772	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDC4	23644	broad.mit.edu	37	16	67916257	67916257	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57896099	57896099	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57897409	57897409	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEA1	8411	broad.mit.edu	37	12	93278249	93278249	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28320374	28320374	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	43995767	43995767	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	44198750	44198750	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB7	84455	broad.mit.edu	37	1	63999713	63999713	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38425037	38425037	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK3	9451	broad.mit.edu	37	2	88913343	88913343	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B5	8893	broad.mit.edu	37	3	183860205	183860205	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C1	26523	broad.mit.edu	37	1	36380996	36380996	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141567304	141567304	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3D	8664	broad.mit.edu	37	22	36922271	36922271	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELANE	1991	broad.mit.edu	37	19	852295	852296	+	5'UTR	DNP	GG	TT	TT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36895148	36895148	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37256147	37256147	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMOD1	55531	broad.mit.edu	37	11	107514308	107514308	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMOD1	55531	broad.mit.edu	37	11	107535886	107535886	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79470928	79470928	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2885191	2885191	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML3	256364	broad.mit.edu	37	11	62378705	62378705	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO3	2027	broad.mit.edu	37	17	4856631	4856631	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120612922	120612922	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTHD1	150350	broad.mit.edu	37	22	40283562	40283562	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD2	954	broad.mit.edu	37	9	139944322	139944322	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EOMES	8320	broad.mit.edu	37	3	27761887	27761887	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132522603	132522603	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L1	2036	broad.mit.edu	37	20	34797560	34797560	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5396036	5396036	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89521734	89521734	+	Nonsense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66270133	66270133	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66356246	66356246	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134514572	134514572	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB3	2049	broad.mit.edu	37	3	184293614	184293614	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564763	142564763	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPO	2056	broad.mit.edu	37	7	100320871	100320871	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144944968	144944968	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220153629	220153629	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56271329	56271329	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56276772	56276773	+	Intron	DNP	CC	AT	AT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAP1	51752	broad.mit.edu	37	5	96117578	96117578	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212251644	212251644	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC2	2068	broad.mit.edu	37	19	45867586	45867586	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERGIC3	51614	broad.mit.edu	37	20	34144838	34144838	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERP44	23071	broad.mit.edu	37	9	102820043	102820043	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT2	57488	broad.mit.edu	37	7	158534156	158534156	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159601639	159601639	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETNK1	55500	broad.mit.edu	37	12	22811970	22811970	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	14028502	14028502	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74010647	74010647	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27285713	27285713	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC1	55763	broad.mit.edu	37	4	56765816	56765816	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3L2	90332	broad.mit.edu	37	19	45716578	45716578	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3	11336	broad.mit.edu	37	5	453846	453846	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57699360	57699360	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC8	149371	broad.mit.edu	37	1	231473215	231473215	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11R	50848	broad.mit.edu	37	1	160969630	160969630	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11	2160	broad.mit.edu	37	4	187192858	187192858	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6167910	6167910	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6305623	6305623	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197024886	197024886	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197024935	197024935	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169510946	169510946	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F7	2155	broad.mit.edu	37	13	113771780	113771780	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A2	10827	broad.mit.edu	37	5	153390742	153390742	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123A	219287	broad.mit.edu	37	13	25745661	25745661	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184767187	184767187	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143053713	143053713	+	Missense_Mutation	SNP	C	G	G	rs143238060	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM133A	286499	broad.mit.edu	37	X	92964820	92964820	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220045025	220045025	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134B	54463	broad.mit.edu	37	5	16477873	16477873	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134B	54463	broad.mit.edu	37	5	16565879	16565879	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139153624	139153624	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139163634	139163634	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139255187	139255187	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89709140	89709140	+	Intron	DEL	A	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM151B	167555	broad.mit.edu	37	5	79797565	79797565	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187605168	187605168	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM178A	55719	broad.mit.edu	37	10	102719030	102719030	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45432037	45432037	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45512869	45512869	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM187B	148109	broad.mit.edu	37	19	35719355	35719355	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30891977	30891977	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26E	254228	broad.mit.edu	37	6	116837003	116837003	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21825448	21825448	+	RNA	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24330701	24330701	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM53B	9679	broad.mit.edu	37	10	126395118	126395118	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12236986	12236986	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90537715	90537715	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90537946	90537946	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM78B	149297	broad.mit.edu	37	1	166039586	166039586	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163059565	163059565	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD5	60493	broad.mit.edu	37	20	3129210	3129210	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187542468	187542468	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150922455	150922455	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150932774	150932774	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92523468	92523468	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92526085	92526085	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126412051	126412051	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127673811	127673811	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127674798	127674798	+	Intron	SNP	G	T	T	rs145050744	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8130964	8130964	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8154868	8154868	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL12	54850	broad.mit.edu	37	19	9921870	9921870	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102580103	102580103	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928643	15928643	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO21	23014	broad.mit.edu	37	12	117583913	117583914	+	Frame_Shift_Ins	INS	-	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO24	26261	broad.mit.edu	37	7	100184157	100184157	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO33	254170	broad.mit.edu	37	14	39870665	39870665	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO39	162517	broad.mit.edu	37	17	6683885	6683885	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW2	26190	broad.mit.edu	37	9	123535119	123535119	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1A	2205	broad.mit.edu	37	1	159271987	159271987	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161479613	161479613	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161641130	161641130	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161641338	161641338	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157665415	157665415	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157485461	157485461	+	3'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157497686	157497686	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125047670	125047670	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125131753	125131753	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERD3L	222894	broad.mit.edu	37	7	19184799	19184799	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERMT1	55612	broad.mit.edu	37	20	6068532	6068532	+	Splice_Site	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERMT1	55612	broad.mit.edu	37	20	6096636	6096636	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FES	2242	broad.mit.edu	37	15	91428191	91428191	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14905750	14905750	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR2	2263	broad.mit.edu	37	10	123274659	123274659	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34081905	34081905	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50514903	50514903	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL2	401720	broad.mit.edu	37	12	52215878	52215878	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328896	152328896	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279701	152279701	+	Nonsense_Mutation	SNP	G	T	T	rs121909626		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ44082	389762	broad.mit.edu	37	9	84564721	84564721	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84603710	84603710	+	5'UTR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84603714	84603714	+	5'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT2	2319	broad.mit.edu	37	17	27208024	27208024	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28893581	28893581	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL1	752	broad.mit.edu	37	17	43313572	43313572	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171162369	171162369	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216272915	216272915	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP2	57600	broad.mit.edu	37	4	159780333	159780333	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89420534	89420534	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89420633	89420633	+	Intron	SNP	A	T	T	rs3018785		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L1	200350	broad.mit.edu	37	2	114256807	114256807	+	5'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN4	121643	broad.mit.edu	37	12	109723261	109723261	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXR1	283150	broad.mit.edu	37	11	118849966	118849966	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79238711	79238711	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79371325	79371325	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14797768	14797768	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14859203	14859203	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85958079	85958079	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48559204	48559204	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44973781	44973781	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44975604	44975604	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCN3	29999	broad.mit.edu	37	7	127239547	127239547	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49190937	49190937	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTCD	10841	broad.mit.edu	37	21	47557348	47557348	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD3	5349	broad.mit.edu	37	19	35611933	35611933	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39119135	39119135	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD3	7976	broad.mit.edu	37	8	28360629	28360629	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC2	57818	broad.mit.edu	37	2	169761157	169761157	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46305517	46305517	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46930427	46930427	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46981053	46981054	+	Frame_Shift_Ins	INS	-	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26825654	26825654	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151130895	151130895	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151809026	151809026	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89888660	89888660	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171685942	171685942	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	844769	844769	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230378980	230378980	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173301565	173301565	+	Intron	SNP	G	T	T	rs7668538		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62394443	62394443	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62396218	62396218	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62400518	62400518	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62400850	62400850	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62402453	62402453	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62406812	62406812	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9923093	9923093	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8100386	8100386	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8115980	8115980	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA6	2627	broad.mit.edu	37	18	19762931	19762931	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104139301	104139301	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89655791	89655791	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFAP	2670	broad.mit.edu	37	17	42992785	42992785	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69586323	69586323	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA1	2674	broad.mit.edu	37	10	117849235	117849235	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGN	199720	broad.mit.edu	37	19	38877550	38877550	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33440034	33440034	+	Missense_Mutation	SNP	G	A	A	rs142938362	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH1	2688	broad.mit.edu	37	17	61995231	61995231	+	Silent	SNP	G	T	T	rs144610881		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42465501	42465501	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK2	2712	broad.mit.edu	37	4	80327728	80327728	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1L2	144321	broad.mit.edu	37	12	75816874	75816874	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14627266	14627266	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102974075	102974075	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL2	219970	broad.mit.edu	37	11	58605904	58605904	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19751491	19751491	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56374811	56374811	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57474422	57474422	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG3	2785	broad.mit.edu	37	11	62476249	62476249	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPTAB	79158	broad.mit.edu	37	12	102164039	102164039	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPTG	84572	broad.mit.edu	37	16	1412444	1412444	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133373168	133373168	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167742850	167742850	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GORAB	92344	broad.mit.edu	37	1	170501310	170501310	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1L1	137362	broad.mit.edu	37	8	37793322	37793322	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1	2805	broad.mit.edu	37	10	101180609	101180609	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAA1	8733	broad.mit.edu	37	8	145139557	145139557	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217783678	217783678	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42501871	42501871	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC2	221914	broad.mit.edu	37	7	99768131	99768131	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135429356	135429357	+	Missense_Mutation	DNP	CT	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043388	20043389	+	Frame_Shift_Ins	INS	-	G	G	rs140063049	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR32	2854	broad.mit.edu	37	19	51273984	51273984	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133174567	133174567	+	5'UTR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150349713	150349713	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR83	10888	broad.mit.edu	37	11	94113286	94113287	+	3'UTR	DNP	CC	AG	AG			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19873269	19873269	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1A	57655	broad.mit.edu	37	19	35510014	35510014	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153078460	153078460	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122460066	122460066	+	Splice_Site	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120732757	120732757	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9934799	9934799	+	Silent	SNP	G	T	T	rs146157761		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9943652	9943652	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9984903	9984903	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104433159	104433159	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104448837	104448837	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP2	80852	broad.mit.edu	37	3	14552836	14552836	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3030840	3030840	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRLF1	2909	broad.mit.edu	37	19	47503629	47503629	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM2	2912	broad.mit.edu	37	3	51743227	51743227	+	Silent	SNP	G	A	A	rs140328919		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88583117	88583117	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126409874	126409874	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126542587	126542587	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRPR	2925	broad.mit.edu	37	X	16168633	16168633	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27512582	27512582	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106558347	106558347	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106579268	106579268	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14772323	14772323	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPC	2995	broad.mit.edu	37	2	127447909	127447909	+	Intron	SNP	T	A	A	rs56350875		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82940520	82940520	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAT1	8520	broad.mit.edu	37	2	172779027	172779027	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS8	93323	broad.mit.edu	37	19	17186188	17186188	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156479247	156479247	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18688097	18688097	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18788727	18788727	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50534961	50534961	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGFRP3	50810	broad.mit.edu	37	15	83832671	83832671	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242174779	242174779	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236736265	236736265	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236754225	236754225	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73967198	73967198	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37280682	37280682	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37280747	37280747	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	40998295	40998295	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41032890	41032890	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41049430	41049430	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31576758	31576758	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43447137	43447137	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43484068	43484068	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43546663	43546663	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43581632	43581632	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197183364	197183364	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197185132	197185132	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM	220296	broad.mit.edu	37	11	124792116	124792116	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28463681	28463681	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28482077	28482077	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210577832	210577832	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BE	8344	broad.mit.edu	37	6	26183982	26183982	+	5'Flank	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BH	8345	broad.mit.edu	37	6	26252218	26252218	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12161902	12161902	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42047512	42047512	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DRA	3122	broad.mit.edu	37	6	32411630	32411630	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186084471	186084471	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186113375	186113375	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMOX1	3162	broad.mit.edu	37	22	35789386	35789386	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPF	3185	broad.mit.edu	37	10	43882617	43882617	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60312696	60312696	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK2	29911	broad.mit.edu	37	19	12877045	12877045	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA5	3202	broad.mit.edu	37	7	27183050	27183050	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46607968	46607968	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD12	3238	broad.mit.edu	37	2	176964475	176964475	+	5'Flank	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP1BP3	50809	broad.mit.edu	37	1	21071429	21071429	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPGD	3248	broad.mit.edu	37	4	175416704	175416704	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS4	89781	broad.mit.edu	37	22	26872994	26872994	+	Nonsense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100481636	100481636	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRC	3270	broad.mit.edu	37	19	49657696	49657696	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRC	3270	broad.mit.edu	37	19	49657763	49657763	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH3	11255	broad.mit.edu	37	20	60791954	60791954	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188223	152188223	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192704	152192704	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST3A1	9955	broad.mit.edu	37	17	13399541	13399541	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B2	3294	broad.mit.edu	37	16	82131939	82131939	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38654458	38654458	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119965140	119965140	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90B1	7184	broad.mit.edu	37	12	104326486	104326486	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3C	170572	broad.mit.edu	37	3	183774708	183774708	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR6	3362	broad.mit.edu	37	1	19992446	19992446	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3149687	3149687	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53652847	53652852	+	Intron	DEL	GCCGGT	-	-	rs11091285	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYAL4	23553	broad.mit.edu	37	7	123508347	123508347	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70902577	70902577	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70926292	70926292	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220269552	220269552	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM5	7087	broad.mit.edu	37	19	10405227	10405227	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IER5	51278	broad.mit.edu	37	1	181058930	181058930	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT1B	439996	broad.mit.edu	37	10	91143375	91143375	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA6	3443	broad.mit.edu	37	9	21350617	21350617	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD2	7866	broad.mit.edu	37	3	50327638	50327638	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129233203	129233203	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT52	51098	broad.mit.edu	37	20	42242616	42242616	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65682616	65682616	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP2	10644	broad.mit.edu	37	3	185541102	185541102	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160517644	160517644	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130410272	130410272	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18661461	18661461	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117122231	117122231	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41173181	41173181	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL10RA	3587	broad.mit.edu	37	11	117859032	117859032	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12A	3592	broad.mit.edu	37	3	159706910	159706910	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67861345	67861345	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL15RA	3601	broad.mit.edu	37	10	5995118	5995118	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17F	112744	broad.mit.edu	37	6	52103604	52103604	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F9	56300	broad.mit.edu	37	2	113737683	113737683	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102626230	102626230	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102626299	102626299	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAP	3556	broad.mit.edu	37	3	190363614	190363614	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL2	8808	broad.mit.edu	37	2	102849440	102849440	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3118193	3118193	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3132013	3132013	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35856993	35856993	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35873708	35873708	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166896490	166896490	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMP4	92856	broad.mit.edu	37	2	131102277	131102277	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH1	3614	broad.mit.edu	37	7	128034704	128034704	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76744338	76744338	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62293239	62293239	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62545357	62545357	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62582973	62582973	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41729730	41729730	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5B	3633	broad.mit.edu	37	1	38409347	38409347	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15260577	15260577	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS10	55174	broad.mit.edu	37	8	19700505	19700505	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62415445	62415445	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62415784	62415784	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS8	55656	broad.mit.edu	37	8	95862156	95862156	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128625376	128625376	+	Intron	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO4	79711	broad.mit.edu	37	14	24656934	24656934	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30805117	30805117	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30827806	30827806	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQUB	154865	broad.mit.edu	37	7	123092745	123092745	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK4	51135	broad.mit.edu	37	12	44167770	44167770	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISL1	3670	broad.mit.edu	37	5	50680542	50680542	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISPD	729920	broad.mit.edu	37	7	16341035	16341035	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173352313	173352313	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15639334	15639334	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15720659	15720659	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37831762	37831762	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31391194	31391194	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP3	27231	broad.mit.edu	37	19	3942236	3942236	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB2	3689	broad.mit.edu	37	21	46308663	46308663	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54783923	54783923	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54784394	54784394	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7621752	7621752	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7659155	7659155	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156649790	156649790	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4711404	4711404	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4816886	4816886	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26568288	26568288	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPRIP	85450	broad.mit.edu	37	10	106074321	106074321	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPRIP	85450	broad.mit.edu	37	10	106074328	106074328	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP3	282973	broad.mit.edu	37	10	133967450	133967450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUB	84962	broad.mit.edu	37	14	23450581	23450581	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAZ	23254	broad.mit.edu	37	1	15430447	15430447	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCMF1	56888	broad.mit.edu	37	2	85276557	85276557	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA10	3744	broad.mit.edu	37	1	111059903	111059903	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	155893779	155893779	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47989936	47989936	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC2	3747	broad.mit.edu	37	12	75444272	75444272	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND1	3750	broad.mit.edu	37	X	48820029	48820029	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNG1	3755	broad.mit.edu	37	20	49626751	49626751	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNG4	93107	broad.mit.edu	37	16	84256462	84256462	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49944164	49944164	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63483472	63483472	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163369192	163369192	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19479502	19479502	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ1	3758	broad.mit.edu	37	11	128708970	128708970	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88693667	88693667	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88792837	88792837	+	5'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK13	56659	broad.mit.edu	37	14	90650807	90650807	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215368183	215368183	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK6	9424	broad.mit.edu	37	19	38818064	38818064	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78846232	78846232	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154744567	154744567	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62044944	62044944	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133192464	133192464	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18112229	18112229	+	5'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138642913	138642913	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196448400	196448400	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36767015	36767015	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD9	54793	broad.mit.edu	37	8	25315782	25315782	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94731714	94731714	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55971037	55971037	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610415	10610415	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142650745	142650745	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26951226	26951226	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0232	9778	broad.mit.edu	37	4	6863811	6863811	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0427	9811	broad.mit.edu	37	18	46284530	46284530	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27692863	27692863	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42335150	42335150	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57173812	57173812	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182846	57182846	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44110791	44110791	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44172088	44172088	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1328	57536	broad.mit.edu	37	18	34740366	34740366	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1328	57536	broad.mit.edu	37	18	34753036	34753036	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94044105	94044105	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59931285	59931285	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1522	57648	broad.mit.edu	37	1	33236143	33236143	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108279370	108279370	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180886939	180886939	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73963350	73963350	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8891728	8891728	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF11	3832	broad.mit.edu	37	10	94389969	94389969	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF14	9928	broad.mit.edu	37	1	200523545	200523545	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF20B	9585	broad.mit.edu	37	10	91476254	91476254	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39705243	39705243	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200971531	200971531	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51900641	51900641	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51900752	51900752	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51902345	51902345	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3C	3797	broad.mit.edu	37	2	26152180	26152180	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF6	221458	broad.mit.edu	37	6	39387722	39387722	+	Splice_Site	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL2	84063	broad.mit.edu	37	19	36350339	36350339	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158064602	158064602	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC7A	127707	broad.mit.edu	37	1	18808309	18808309	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL13	90293	broad.mit.edu	37	X	117043381	117043381	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL17	339451	broad.mit.edu	37	1	897302	897302	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70275706	70275706	+	3'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70413323	70413323	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL24	54800	broad.mit.edu	37	3	183368109	183368109	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL32	114792	broad.mit.edu	37	6	97561554	97561554	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21674824	21674824	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL36	79786	broad.mit.edu	37	16	84690773	84690773	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK15	55554	broad.mit.edu	37	19	51330130	51330130	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK2	3817	broad.mit.edu	37	19	51381924	51381924	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK7	5650	broad.mit.edu	37	19	51483572	51483572	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK9	284366	broad.mit.edu	37	19	51507026	51507026	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPTN	11133	broad.mit.edu	37	19	47978650	47978650	+	3'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT222	125113	broad.mit.edu	37	17	38818144	38818145	+	Intron	DNP	GG	TT	TT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT25	147183	broad.mit.edu	37	17	38910703	38910703	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT33B	3884	broad.mit.edu	37	17	39521116	39521116	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT34	3885	broad.mit.edu	37	17	39535402	39535402	+	Silent	SNP	C	T	T	rs148874673	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52912811	52912811	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52884523	52884523	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52845258	52845258	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52845437	52845437	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT72	140807	broad.mit.edu	37	12	52994868	52994868	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52966145	52966145	+	Intron	SNP	C	G	G	rs34211466		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT79	338785	broad.mit.edu	37	12	53215770	53215770	+	Missense_Mutation	SNP	C	A	A	rs141269667		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT9	3857	broad.mit.edu	37	17	39726652	39726652	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-4	386672	broad.mit.edu	37	21	45994813	45994813	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-4	284827	broad.mit.edu	37	21	31802904	31802904	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-4	337971	broad.mit.edu	37	21	31869266	31869266	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP27-1	643812	broad.mit.edu	37	21	31709507	31709507	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-4	84616	broad.mit.edu	37	17	39316515	39316515	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-8	83901	broad.mit.edu	37	17	39394396	39394396	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTELC1	56983	broad.mit.edu	37	3	119211072	119211072	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTI12	112970	broad.mit.edu	37	1	52498521	52498521	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153129776	153129777	+	Splice_Site	DNP	CC	AT	AT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL2	83746	broad.mit.edu	37	22	41612354	41612354	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACRT	90070	broad.mit.edu	37	12	55026832	55026833	+	Intron	INS	-	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54866781	54866781	+	3'UTR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54867646	54867646	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7015759	7015759	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7043261	7043261	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129513901	129513901	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21338419	21338419	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107600843	107600843	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154182999	154182999	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBXCOR1	390598	broad.mit.edu	37	15	68123046	68123046	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2A	353139	broad.mit.edu	37	1	152671565	152671565	+	Missense_Mutation	SNP	G	C	C	rs61812673		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2D	353141	broad.mit.edu	37	1	152637025	152637025	+	3'UTR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN8	138307	broad.mit.edu	37	9	139652454	139652454	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16587477	16587477	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16590283	16590283	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD2	401944	broad.mit.edu	37	1	22142456	22142456	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLR	3949	broad.mit.edu	37	19	11224363	11224363	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEFTY1	10637	broad.mit.edu	37	1	226108847	226108847	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEKR1	389170	broad.mit.edu	37	3	156763572	156763572	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66042633	66042633	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66088698	66088698	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104308574	104308574	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104309188	104309188	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX8	431707	broad.mit.edu	37	1	75596372	75596372	+	5'UTR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48639152	48639152	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55106837	55106837	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55085190	55085190	+	5'Flank	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55176161	55176161	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55179176	55179176	+	Missense_Mutation	SNP	C	A	A	rs144033928	byFrequency;by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB5	10990	broad.mit.edu	37	19	54754838	54754839	+	Intron	INS	-	G	G	rs11375503		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB5	10990	broad.mit.edu	37	19	54761079	54761079	+	5'UTR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO1	84894	broad.mit.edu	37	15	77906791	77906791	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPA	3988	broad.mit.edu	37	10	90985062	90985062	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPF	8513	broad.mit.edu	37	10	90427215	90427215	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD1	25802	broad.mit.edu	37	1	201869655	201869655	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK3	114783	broad.mit.edu	37	19	49013301	49013301	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100124692	100124692	broad.mit.edu	37	7	141896523	141896523	+	RNA	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100132247	100132247	broad.mit.edu	37	16	22545922	22545922	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC168474	168474	broad.mit.edu	37	7	64313234	64313234	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200726	200726	broad.mit.edu	37	2	207508998	207508998	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC341056	341056	broad.mit.edu	37	11	122889140	122889140	+	RNA	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440563	440563	broad.mit.edu	37	1	13183308	13183308	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC641298	641298	broad.mit.edu	37	16	22446019	22446019	+	5'Flank	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21936678	21936678	+	RNA	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646813	646813	broad.mit.edu	37	11	50368700	50368700	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646813	646813	broad.mit.edu	37	11	50378060	50378060	+	Intron	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121310485	121310485	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298491	22298491	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728855	728855	broad.mit.edu	37	1	149648480	149648480	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL3	84695	broad.mit.edu	37	2	74764011	74764011	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR3	23566	broad.mit.edu	37	1	85331308	85331308	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160978466	160978466	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161010597	161010597	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82416772	82416772	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82418681	82418681	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62845314	62845314	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62849169	62849169	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2934504	2934504	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151849739	151849739	+	Missense_Mutation	SNP	C	G	G	rs61746090		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH4	4034	broad.mit.edu	37	7	100176407	100176407	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42356335	42356335	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133827996	133827996	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133884105	133884105	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133948696	133948696	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRMP	4033	broad.mit.edu	37	12	25232384	25232384	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141356323	141356323	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57569182	57569182	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57569858	57569858	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170058337	170058337	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170094714	170094714	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP5	4041	broad.mit.edu	37	11	68157355	68157355	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC50	123872	broad.mit.edu	37	16	84203839	84203839	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC69	100130742	broad.mit.edu	37	8	92170411	92170411	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70541879	70541879	+	Missense_Mutation	SNP	G	T	T	rs143842567		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85438631	85438631	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85518200	85518200	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85546088	85546088	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74575280	74575280	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40689247	40689247	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN1	57633	broad.mit.edu	37	3	3887744	3887744	+	Silent	SNP	A	T	T	rs150270030	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204587709	204587709	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77746810	77746810	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33500076	33500076	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP3	4054	broad.mit.edu	37	11	65314867	65314867	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6D	8581	broad.mit.edu	37	8	143867131	143867131	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYAR	55646	broad.mit.edu	37	4	4283675	4283675	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLA1	10434	broad.mit.edu	37	8	54978393	54978393	+	Intron	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235915417	235915417	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235973489	235973489	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYVE1	10894	broad.mit.edu	37	11	10589895	10589895	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21348288	21348288	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L2	10586	broad.mit.edu	37	4	151504190	151504190	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L2	10459	broad.mit.edu	37	1	11735035	11735035	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166973340	166973340	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148798282	148798282	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB16	139604	broad.mit.edu	37	X	35821107	35821107	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141290631	141290631	+	3'UTR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141291417	141291417	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78150938	78150938	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	79082684	79082684	+	5'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109178149	109178149	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75656607	75656607	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21201672	21201672	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21206478	21206478	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K15	389840	broad.mit.edu	37	X	19443709	19443709	+	5'UTR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161530849	161530849	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K1	11184	broad.mit.edu	37	19	39108378	39108378	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K5	11183	broad.mit.edu	37	14	50929563	50929563	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	47963399	47963399	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49628332	49628332	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH10	162333	broad.mit.edu	37	17	60814126	60814126	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16091001	16091001	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119731947	119731947	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119752009	119752009	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220791648	220791648	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220799536	220799536	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66437819	66437819	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT2B	27430	broad.mit.edu	37	5	162939126	162939126	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATK	4145	broad.mit.edu	37	19	3778603	3778603	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31188733	31188733	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31189605	31189605	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31194163	31194163	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	98943174	98943174	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	98954084	98954084	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47801936	47801936	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD4	8930	broad.mit.edu	37	3	129151986	129151986	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD4	8930	broad.mit.edu	37	3	129152874	129152874	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBIP	51562	broad.mit.edu	37	14	36789785	36789785	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBL2	4153	broad.mit.edu	37	10	54529127	54529127	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCC2	64087	broad.mit.edu	37	5	70944875	70944875	+	Intron	SNP	G	T	T	rs143245525	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113740611	113740611	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138689785	138689785	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3	4172	broad.mit.edu	37	6	52134160	52134160	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136598469	136598469	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49959862	49959862	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47342692	47342692	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150881588	150881588	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151078261	151078261	+	Splice_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60023740	60023740	+	3'UTR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED15	51586	broad.mit.edu	37	22	20891465	20891465	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37575999	37575999	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37187207	37187207	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL12	751071	broad.mit.edu	37	11	62434555	62434555	+	3'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2B	55798	broad.mit.edu	37	7	128138196	128138196	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL5	29081	broad.mit.edu	37	2	170677819	170677819	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116423428	116423428	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158537473	158537473	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158538032	158538032	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST3	4259	broad.mit.edu	37	1	165623639	165623639	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB1	57534	broad.mit.edu	37	18	19378025	19378025	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR30D	407033	broad.mit.edu	37	8	135817159	135817159	+	RNA	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR365-2	100126356	broad.mit.edu	37	17	29902397	29902397	+	5'Flank	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR892A	100126342	broad.mit.edu	37	X	145078248	145078248	+	RNA	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKNK1	8569	broad.mit.edu	37	1	47025965	47025965	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151970887	151970887	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT11	10962	broad.mit.edu	37	1	151039695	151039695	+	5'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168315512	168315512	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36861986	36861986	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118363824	118363824	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLXIPL	51085	broad.mit.edu	37	7	73008622	73008622	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLX	6945	broad.mit.edu	37	17	40720378	40720378	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2535801	2535801	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89068353	89068353	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89128827	89128827	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89339260	89339260	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102449730	102449730	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP27	64066	broad.mit.edu	37	11	102573517	102573517	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44641127	44641127	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158813156	158813156	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158813815	158813815	+	Missense_Mutation	SNP	C	A	A	rs149728698		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158815621	158815621	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH6	10200	broad.mit.edu	37	16	82197792	82197792	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP3	4356	broad.mit.edu	37	17	41888475	41888475	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP4	58538	broad.mit.edu	37	2	202558754	202558754	+	5'UTR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRAP2	112609	broad.mit.edu	37	6	84772676	84772676	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC1	4360	broad.mit.edu	37	10	18138603	18138603	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL14	64928	broad.mit.edu	37	6	44084201	44084201	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL47	57129	broad.mit.edu	37	3	179316492	179316492	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL50	54534	broad.mit.edu	37	9	104160913	104160913	+	5'UTR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS30	10884	broad.mit.edu	37	5	44809482	44809482	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A13	503497	broad.mit.edu	37	11	60296947	60296947	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60164175	60164175	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLNL	401827	broad.mit.edu	37	16	822938	822938	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86575887	86575887	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR12	54545	broad.mit.edu	37	5	32248925	32248925	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9719630	9719630	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1A	4543	broad.mit.edu	37	4	187455454	187455454	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92715442	92715442	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11264722	11264722	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30611320	30611320	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237001686	237001686	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1	9788	broad.mit.edu	37	8	125601806	125601806	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	30072526	30072526	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC15	143662	broad.mit.edu	37	11	26586719	26586719	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9007664	9007664	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9076553	9076553	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9082905	9082906	+	Missense_Mutation	DNP	CA	AT	AT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9088391	9088391	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9089293	9089293	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100678017	100678017	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1095202	1095202	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1221953	1221953	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1274101	1274101	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71346651	71346651	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71346954	71346954	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUDENG	55745	broad.mit.edu	37	14	57749878	57749878	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42824753	42824753	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42778787	42778787	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102067343	102067343	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102071040	102071040	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48441490	48441490	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15808819	15808819	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10435163	10435163	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23856749	23856749	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23885116	23885116	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16902485	16902485	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26388540	26388540	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192288625	192288625	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	30986161	30986161	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26310512	26310512	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26359099	26359099	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26457730	26457730	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171240296	171240296	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5C	55930	broad.mit.edu	37	15	52568025	52568025	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9B	4650	broad.mit.edu	37	19	17265191	17265191	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2044234	2044234	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2056737	2056737	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41800537	41800537	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926489	1926489	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA10	8260	broad.mit.edu	37	X	153197676	153197676	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89903162	89903162	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89916115	89916115	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NANOS1	340719	broad.mit.edu	37	10	120790054	120790054	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201777167	201777167	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201779675	201779675	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334047	78334047	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78515894	78515894	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78574729	78574729	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78593237	78593237	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15506615	15506615	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16892336	16892336	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16893052	16893052	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144220792	144220792	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBR1	4077	broad.mit.edu	37	17	41352478	41352478	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCK2	8440	broad.mit.edu	37	2	106498470	106498470	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54893129	54893129	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54914393	54914393	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133541199	133541199	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15968780	15968780	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124826399	124826399	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG2	57447	broad.mit.edu	37	14	21499168	21499168	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119174651	119174651	+	Intron	SNP	T	C	C	rs5861383		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA8	4702	broad.mit.edu	37	9	124922030	124922030	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFV1	4723	broad.mit.edu	37	11	67379818	67379818	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152426643	152426643	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB3	63941	broad.mit.edu	37	20	32258671	32258671	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEFM	4741	broad.mit.edu	37	8	24774647	24774647	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156642662	156642662	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NET1	10276	broad.mit.edu	37	10	5495190	5495190	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70461637	70461637	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEU4	129807	broad.mit.edu	37	2	242758367	242758367	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD4	58158	broad.mit.edu	37	12	55421015	55421015	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD4	58158	broad.mit.edu	37	12	55421034	55421034	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	22140241	22140241	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103822447	103822447	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52505472	52505472	+	Silent	SNP	C	A	A	rs149933876		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIF3L1	60491	broad.mit.edu	37	2	201758087	201758087	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37064563	37064563	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124676569	124676569	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63769231	63769231	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKPD1	284353	broad.mit.edu	37	19	45655751	45655752	+	Frame_Shift_Ins	INS	-	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN2	57555	broad.mit.edu	37	17	7317710	7317710	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7981665	7981665	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7063578	7063578	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55485245	55485245	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247582054	247582054	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247592911	247592911	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55450962	55450962	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56466489	56466489	+	Silent	SNP	G	T	T	rs149180489		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56477783	56477783	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56244283	56244283	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRX1	79671	broad.mit.edu	37	11	119045184	119045184	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC4L	79050	broad.mit.edu	37	12	132630208	132630208	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC4L	79050	broad.mit.edu	37	12	132630210	132630210	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14951512	14951512	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2951843	2951843	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP16	51491	broad.mit.edu	37	5	175815678	175815678	+	5'Flank	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26092683	26092683	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26108314	26108314	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32188337	32188337	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	26918030	26918030	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR2	2832	broad.mit.edu	37	20	62737247	62737247	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34888348	34888348	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY1R	4886	broad.mit.edu	37	4	164246890	164246890	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156136234	156136234	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY5R	4889	broad.mit.edu	37	4	164272461	164272461	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502608	108502608	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A2	4929	broad.mit.edu	37	2	157183359	157183359	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129317716	129317716	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32585597	32585597	+	Splice_Site	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32617782	32617782	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84625161	84625161	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50765423	50765423	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64419599	64419599	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSL1	25936	broad.mit.edu	37	1	212911978	212911978	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6599858	6599858	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132177605	132177605	+	Missense_Mutation	SNP	C	A	A	rs138880898		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132204851	132204851	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132204969	132204969	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156849272	156849272	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87486716	87486716	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88726826	88726826	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT19	390916	broad.mit.edu	37	19	33202918	33202918	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163297194	163297194	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229613447	229613447	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUTF2	10204	broad.mit.edu	37	16	67899124	67899124	+	Missense_Mutation	SNP	G	C	C	rs146730920		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXPH3	11248	broad.mit.edu	37	17	47656602	47656602	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24884157	24884157	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYX	60506	broad.mit.edu	37	X	41331555	41331555	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS2	4939	broad.mit.edu	37	12	113444525	113444525	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS3	4940	broad.mit.edu	37	12	113400594	113400594	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228494903	228494903	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228520489	228520489	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71067918	71067918	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123516702	123516702	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123663706	123663706	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167182307	167182307	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132812797	132812797	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1SW	611	broad.mit.edu	37	7	128414653	128414653	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47779328	47779328	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A4	283297	broad.mit.edu	37	11	6898719	6898719	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10C1	442194	broad.mit.edu	37	6	29407951	29407951	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J3	441911	broad.mit.edu	37	1	159283942	159283942	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10K1	391109	broad.mit.edu	37	1	158435340	158435340	+	5'Flank	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10R2	343406	broad.mit.edu	37	1	158450496	158450496	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368428	158368428	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Z1	128368	broad.mit.edu	37	1	158576328	158576328	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Z1	128368	broad.mit.edu	37	1	158576605	158576605	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367420	107367420	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107360953	107360953	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247836003	247836004	+	Frame_Shift_Ins	INS	-	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A2	442361	broad.mit.edu	37	7	143807496	143807496	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AE1	81392	broad.mit.edu	37	7	99474527	99474527	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128964	248128964	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D2	120776	broad.mit.edu	37	11	6913787	6913787	+	5'Flank	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247751823	247751823	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752093	247752093	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752523	247752523	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769067	247769067	+	Nonsense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685080	248685080	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J3	442186	broad.mit.edu	37	6	29080108	29080108	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247621	248247621	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247739	248247739	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L1P	26247	broad.mit.edu	37	1	248154134	248154134	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M1P	388762	broad.mit.edu	37	1	248285297	248285297	+	5'Flank	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343360	248343360	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343446	248343446	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M4	26245	broad.mit.edu	37	1	248402423	248402423	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248309381	248309381	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T11	127077	broad.mit.edu	37	1	248789791	248789791	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T1	26696	broad.mit.edu	37	1	248569919	248569919	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T1	26696	broad.mit.edu	37	1	248570181	248570181	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T27	403239	broad.mit.edu	37	1	248814155	248814155	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551230	248551230	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55111467	55111467	+	Missense_Mutation	SNP	C	A	A	rs138375517		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C13	283092	broad.mit.edu	37	11	49974659	49974659	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C16	219428	broad.mit.edu	37	11	55339944	55339944	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55433423	55433423	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D11	219986	broad.mit.edu	37	11	59271184	59271184	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K5	79317	broad.mit.edu	37	14	20389047	20389047	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22332972	22332972	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4S2	219431	broad.mit.edu	37	11	55418981	55418981	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B4	79339	broad.mit.edu	37	11	5322666	5322666	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020211	5020211	+	5'Flank	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5021140	5021140	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221366	5221366	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52J3	119679	broad.mit.edu	37	11	5067999	5067999	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6007960	6007960	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6008099	6008099	+	Nonsense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5A1	219982	broad.mit.edu	37	11	59210995	59210995	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55761413	55761413	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703324	55703324	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5J2	282775	broad.mit.edu	37	11	55944482	55944482	+	Nonsense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579049	55579049	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595543	55595543	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5P3	120066	broad.mit.edu	37	11	7847327	7847327	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5R1	219479	broad.mit.edu	37	11	56185388	56185388	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000334	56000334	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687240	158687240	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687470	158687470	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158736408	158736408	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6Q1	219952	broad.mit.edu	37	11	57799225	57799225	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6T1	219874	broad.mit.edu	37	11	123814154	123814154	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55872935	55872935	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890265	55890265	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K3	219473	broad.mit.edu	37	11	56086209	56086209	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G4	283189	broad.mit.edu	37	11	56510984	56510984	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC5L	5001	broad.mit.edu	37	7	103808891	103808891	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24874067	24874067	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTF1	26578	broad.mit.edu	37	9	77745657	77745657	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTN	344901	broad.mit.edu	37	3	190930383	190930383	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21698943	21698943	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21742117	21742117	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26699016	26699016	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26706330	26706330	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4199402	4199402	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOS	150677	broad.mit.edu	37	2	241078728	241078728	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD5	55593	broad.mit.edu	37	X	48783166	48783166	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7A	161725	broad.mit.edu	37	15	31796143	31796143	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29614986	29614986	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29648074	29648074	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXGR1	27199	broad.mit.edu	37	13	97639466	97639466	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXGR1	27199	broad.mit.edu	37	13	97639828	97639828	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSR1	9943	broad.mit.edu	37	3	38287626	38287626	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXTR	5021	broad.mit.edu	37	3	8809287	8809287	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX2	22953	broad.mit.edu	37	12	133197533	133197533	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX3	5024	broad.mit.edu	37	11	57114202	57114202	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX4	5025	broad.mit.edu	37	12	121660769	121660769	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX5	5026	broad.mit.edu	37	17	3593445	3593445	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX6P	440799	broad.mit.edu	37	22	21399177	21399177	+	5'Flank	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY1	5028	broad.mit.edu	37	3	152554428	152554428	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PA2G4	5036	broad.mit.edu	37	12	56504553	56504553	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90691552	90691552	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90691715	90691715	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110366331	110366331	+	5'UTR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9560984	9560984	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9560986	9560986	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100155280	100155280	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35456397	35456397	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56713716	56713716	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK2	80025	broad.mit.edu	37	20	3899210	3899210	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176709266	176709266	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR3	152559	broad.mit.edu	37	4	79847698	79847698	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR9	344838	broad.mit.edu	37	3	142681453	142681453	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206364738	206364738	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARN	5073	broad.mit.edu	37	16	14676033	14676033	+	Intron	SNP	C	G	G	rs144238272	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP10	84875	broad.mit.edu	37	8	145060242	145060242	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP2	10038	broad.mit.edu	37	14	20815117	20815117	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASK	23178	broad.mit.edu	37	2	242077446	242077446	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASK	23178	broad.mit.edu	37	2	242079351	242079351	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102566402	102566402	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102587471	102587471	+	3'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127251562	127251562	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX6	5080	broad.mit.edu	37	11	31816191	31816191	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164789339	164789339	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072090	134072090	+	Silent	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55570360	55570360	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55581558	55581558	+	3'UTR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138669	56138669	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH1	5097	broad.mit.edu	37	5	141244261	141244261	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA10	56139	broad.mit.edu	37	5	140237058	140237058	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140256592	140256592	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA13	56136	broad.mit.edu	37	5	140262359	140262359	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181091	140181091	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140308490	140308490	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140348144	140348144	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537664	140537664	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB19P	84054	broad.mit.edu	37	5	140621367	140621367	+	3'UTR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140476327	140476327	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140502416	140502416	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553578	140553578	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140558593	140558593	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559020	140559020	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559032	140559032	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA3	56112	broad.mit.edu	37	5	140725056	140725056	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140772969	140772969	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB4	8641	broad.mit.edu	37	5	140769611	140769611	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB5	56101	broad.mit.edu	37	5	140780026	140780026	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544170	82544170	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82545171	82545171	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233344477	233344477	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71513866	71513866	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCP4	5121	broad.mit.edu	37	21	41239497	41239497	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK2	5126	broad.mit.edu	37	20	17434420	17434420	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78710913	78710913	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183129074	183129074	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20806975	20806975	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	59284456	59284456	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8A	5151	broad.mit.edu	37	15	85679575	85679575	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76627258	76627258	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55138808	55138808	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA6	10130	broad.mit.edu	37	2	10929171	10929171	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPR	55066	broad.mit.edu	37	16	70154580	70154580	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57335796	57335796	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX11G	92960	broad.mit.edu	37	19	7543247	7543247	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179537683	179537683	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5	5830	broad.mit.edu	37	12	7362816	7362816	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB1	5207	broad.mit.edu	37	X	54975428	54975428	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6261507	6261507	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFN1	5216	broad.mit.edu	37	17	4851651	4851651	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAP1	80055	broad.mit.edu	37	2	197712780	197712780	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	71098950	71098950	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGR	5241	broad.mit.edu	37	11	100912825	100912825	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF12	57649	broad.mit.edu	37	17	27233534	27233534	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF3	23469	broad.mit.edu	37	6	64356528	64356528	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71692471	71692471	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYHD1	254295	broad.mit.edu	37	9	131703596	131703596	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYHD1	254295	broad.mit.edu	37	9	131703918	131703918	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	533009	533009	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35092239	35092239	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35094437	35094437	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGV	55650	broad.mit.edu	37	1	27120928	27120928	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17167339	17167339	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39609247	39609247	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130463714	130463714	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIM3	415116	broad.mit.edu	37	22	50356547	50356547	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71555567	71555567	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM1	9600	broad.mit.edu	37	11	67269818	67269818	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47930295	47930295	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102055997	102055997	+	Missense_Mutation	SNP	C	T	T	rs145997401	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110401423	110401423	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110478983	110478983	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110482703	110482703	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125255342	125255342	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32977015	32977015	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	33031388	33031389	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186925481	186925499	+	Intron	DEL	GTGTACAAATATAATTAGT	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC1L	219990	broad.mit.edu	37	11	59814632	59814632	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL2	5326	broad.mit.edu	37	20	30789751	30789751	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28789741	28789741	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28789843	28789843	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28816594	28816594	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8698550	8698550	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81960739	81960739	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCZ1	89869	broad.mit.edu	37	12	18848045	18848045	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171394595	171394595	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171404495	171404495	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD3	23646	broad.mit.edu	37	19	40876170	40876170	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA5	54477	broad.mit.edu	37	12	19506725	19506725	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935267	131935267	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG3	26030	broad.mit.edu	37	14	65210038	65210038	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	155007	155007	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43927793	43927793	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHM3	389072	broad.mit.edu	37	2	208773222	208773223	+	Intron	DNP	CC	GA	GA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68607577	68607577	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161162348	161162348	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN3	10226	broad.mit.edu	37	19	4839200	4839200	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR4	57088	broad.mit.edu	37	3	145914458	145914458	+	Silent	SNP	T	C	C	rs141714822		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126749031	126749031	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844474	131844474	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131872127	131872127	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMPCB	9512	broad.mit.edu	37	7	102939074	102939074	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118355853	118355853	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118364829	118364829	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118220556	118220556	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118307692	118307692	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMAL2	57469	broad.mit.edu	37	19	46997168	46997168	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA5	150379	broad.mit.edu	37	22	44282278	44282278	+	Missense_Mutation	SNP	C	T	T	rs144693499	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA6	10908	broad.mit.edu	37	19	7606248	7606248	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODN	127435	broad.mit.edu	37	1	53543269	53543269	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133214629	133214629	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG	5428	broad.mit.edu	37	15	89866008	89866008	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7406782	7406782	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79743987	79743987	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106760300	106760300	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106895214	106895214	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103830	53103830	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134388752	134388752	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38160919	38160919	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124480939	124480939	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43211911	43211911	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	132021506	132021506	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16279392	16279392	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287187	16287187	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23797582	23797582	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23816059	23816059	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23833288	23833288	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81741468	81741468	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIE	10450	broad.mit.edu	37	1	40211188	40211188	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94915575	94915575	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R1	9989	broad.mit.edu	37	18	9562080	9562080	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF4	400735	broad.mit.edu	37	1	12942121	12942121	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB1	5542	broad.mit.edu	37	12	11506880	11506880	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM14	63978	broad.mit.edu	37	8	70980625	70980625	+	Intron	DEL	A	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM4	11108	broad.mit.edu	37	12	108145650	108145650	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509102	23509102	+	5'UTR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELID2	153768	broad.mit.edu	37	5	145199614	145199614	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105771496	105771496	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69017251	69017251	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57398085	57398085	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAA2	5563	broad.mit.edu	37	1	57158189	57158189	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24192147	24192147	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46378245	46378245	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54403579	54403579	+	Splice_Site	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48790466	48790466	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLHR	2834	broad.mit.edu	37	10	120353854	120353854	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR21	643905	broad.mit.edu	37	2	240981267	240981267	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142457420	142457420	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18793370	18793370	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG11	5680	broad.mit.edu	37	19	43523025	43523025	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43522744	43522744	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43576589	43576589	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43762581	43762581	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH1	5681	broad.mit.edu	37	16	67942625	67942625	+	5'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH1	5681	broad.mit.edu	37	16	67943486	67943486	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23751177	23751177	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD12	5718	broad.mit.edu	37	17	65340938	65340938	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD1	5707	broad.mit.edu	37	2	231926996	231926996	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54149743	54149743	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTK	118672	broad.mit.edu	37	10	124740113	124740113	+	Missense_Mutation	SNP	C	G	G	rs142993778	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP1	5725	broad.mit.edu	37	19	805468	805468	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD1	139411	broad.mit.edu	37	X	23412035	23412035	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11574630	11574630	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11579514	11579514	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD3	374308	broad.mit.edu	37	10	27701854	27701854	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS1	5742	broad.mit.edu	37	9	125154597	125154597	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141754835	141754835	+	Missense_Mutation	SNP	C	A	A	rs146511319	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPDC1	138639	broad.mit.edu	37	9	96860156	96860156	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87693953	87693953	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70948995	70948995	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668713	198668713	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8499764	8499764	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8501071	8501071	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8518231	8518231	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128294835	128294835	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15733636	15733636	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRS	5802	broad.mit.edu	37	19	5286034	5286034	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40757307	40757307	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121597092	121597092	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20463123	20463123	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1648339	1648339	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYHIN1	149628	broad.mit.edu	37	1	158908283	158908284	+	Frame_Shift_Ins	INS	-	A	A	rs138593148		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74286987	74286987	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSOX1	5768	broad.mit.edu	37	1	180155358	180155358	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM2	22864	broad.mit.edu	37	12	57663634	57663634	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB1B	81876	broad.mit.edu	37	11	66039310	66039310	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB21	23011	broad.mit.edu	37	12	72179334	72179334	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB28	9364	broad.mit.edu	37	4	13378359	13378359	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB37	326624	broad.mit.edu	37	17	72741407	72741407	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5A	5868	broad.mit.edu	37	3	20017161	20017161	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD18	56852	broad.mit.edu	37	3	8940734	8940734	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD50	10111	broad.mit.edu	37	5	131931247	131931247	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP1	10635	broad.mit.edu	37	12	4665604	4665604	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L3	5892	broad.mit.edu	37	17	33446641	33446641	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1AP1	55974	broad.mit.edu	37	1	155200945	155200945	+	Intron	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALB	5899	broad.mit.edu	37	2	121050904	121050904	+	3'UTR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170626798	170626798	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36270162	36270162	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1B	5908	broad.mit.edu	37	12	69036588	69036588	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160264503	160264503	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA1	5921	broad.mit.edu	37	5	86648978	86648978	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178380796	178380796	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178410824	178410824	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82366732	82366732	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH10	157506	broad.mit.edu	37	8	74235397	74235397	+	3'UTR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79348047	79348047	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79348453	79348453	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79350261	79350261	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384867	79384867	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79385498	79385498	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79385742	79385742	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103130446	103130446	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103163867	103163867	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103244704	103244704	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103368565	103368565	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV1	51455	broad.mit.edu	37	2	100019053	100019053	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFPL4B	442247	broad.mit.edu	37	6	112671283	112671283	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117244365	117244365	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183895386	183895386	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS1	5996	broad.mit.edu	37	1	192544930	192544930	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163137970	163137970	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72939587	72939587	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	73029216	73029216	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241099828	241099828	+	Intron	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHAG	6005	broad.mit.edu	37	6	49583235	49583235	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156354617	156354617	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90023382	90023382	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHD	6007	broad.mit.edu	37	1	25599284	25599284	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOXF1	158800	broad.mit.edu	37	X	119249255	119249255	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152293374	152293374	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104581201	104581201	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104898239	104898239	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104973126	104973126	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105001583	105001583	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43385798	43385798	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN3	79890	broad.mit.edu	37	14	93125862	93125862	+	Intron	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK3	8780	broad.mit.edu	37	18	21047356	21047356	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPK1	8737	broad.mit.edu	37	6	3105950	3105950	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40701547	40701547	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31429561	31429561	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF133	168433	broad.mit.edu	37	7	122338680	122338680	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF138	51444	broad.mit.edu	37	18	29706687	29706687	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63509680	63509680	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78325513	78325513	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNPEPL1	57140	broad.mit.edu	37	2	241513651	241513651	+	Missense_Mutation	SNP	G	C	C	rs139059683		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124748584	124748584	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18534823	18534823	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR1	4919	broad.mit.edu	37	1	64515413	64515413	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORC	6097	broad.mit.edu	37	1	151785401	151785401	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10469147	10469147	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55542122	55542122	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113314541	113314541	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPIA	22934	broad.mit.edu	37	2	89037542	89037542	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL19	6143	broad.mit.edu	37	17	37359396	37359396	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL37	6167	broad.mit.edu	37	5	40834695	40834695	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL4	6124	broad.mit.edu	37	15	66792653	66792653	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPN2	6185	broad.mit.edu	37	20	35833128	35833128	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KC1	26750	broad.mit.edu	37	1	213415049	213415049	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78516009	78516009	+	5'Flank	SNP	G	T	T	rs142324009	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSAD2	91543	broad.mit.edu	37	2	7030450	7030450	+	Missense_Mutation	SNP	C	A	A	rs139075974	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO1	284654	broad.mit.edu	37	1	38078700	38078700	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO1	284654	broad.mit.edu	37	1	38095354	38095354	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC1	51319	broad.mit.edu	37	3	157994009	157994009	+	Intron	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC2	65117	broad.mit.edu	37	12	122991382	122991382	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100738823	100738823	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP2	344892	broad.mit.edu	37	3	187416829	187416829	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67869201	67869201	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87370923	87370923	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX3	864	broad.mit.edu	37	1	25229066	25229066	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155294114	155294114	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237551515	237551515	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608548	237608548	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237796776	237796776	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33916196	33916196	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33925287	33925287	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33991970	33991970	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34115218	34115218	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A12	6283	broad.mit.edu	37	1	153347110	153347110	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR4	8698	broad.mit.edu	37	19	3179494	3179494	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134987498	134987498	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL3	27164	broad.mit.edu	37	18	76753771	76753771	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL3	27164	broad.mit.edu	37	18	76757010	76757010	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50407808	50407808	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4B	55095	broad.mit.edu	37	19	39869131	39869131	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMHD1	25939	broad.mit.edu	37	20	35539642	35539642	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAR1A	56681	broad.mit.edu	37	10	71923601	71923601	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136573484	136573484	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136595406	136595406	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108936916	108936916	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB1	6304	broad.mit.edu	37	3	18427954	18427954	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBK1	388228	broad.mit.edu	37	16	28330425	28330425	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBK1	388228	broad.mit.edu	37	16	28331561	28331561	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBSN	374897	broad.mit.edu	37	19	36017517	36017517	+	Intron	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARA5	286133	broad.mit.edu	37	8	27824142	27824142	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCIN	85477	broad.mit.edu	37	7	12679984	12679984	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166854551	166854551	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166245431	166245431	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165956856	165956856	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62022892	62022892	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1D	6339	broad.mit.edu	37	1	1225810	1225811	+	Intron	INS	-	G	G	rs148154742	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRG1	11341	broad.mit.edu	37	4	174312230	174312230	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	235330	235330	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16B	89866	broad.mit.edu	37	1	177929539	177929539	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61G	23480	broad.mit.edu	37	7	54826833	54826833	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169698749	169698749	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83606315	83606315	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83739857	83739857	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3B	7869	broad.mit.edu	37	3	50308357	50308357	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84642099	84642099	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9042987	9042987	+	3'UTR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115818122	115818122	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6B	10501	broad.mit.edu	37	19	4556015	4556015	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48022784	48022784	+	Intron	SNP	C	A	A	rs116672515	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP3	26168	broad.mit.edu	37	17	7473579	7473579	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPN1	57190	broad.mit.edu	37	1	26140371	26140371	+	Splice_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT10	151011	broad.mit.edu	37	2	110350700	110350700	+	Intron	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61259757	61259757	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61323407	61323407	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPING1	710	broad.mit.edu	37	11	57367360	57367360	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD3	29946	broad.mit.edu	37	19	40947909	40947909	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30977436	30977436	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B2	10992	broad.mit.edu	37	11	65823007	65823007	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS12IP1	285672	broad.mit.edu	37	5	64064294	64064294	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFT2D2	375035	broad.mit.edu	37	1	168206008	168206008	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTA3	253970	broad.mit.edu	37	14	36946141	36946141	+	Intron	SNP	C	A	A	rs138661494	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK3	23678	broad.mit.edu	37	8	67755904	67755904	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK494	124923	broad.mit.edu	37	17	26938634	26938634	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPP2	130367	broad.mit.edu	37	2	223317210	223317210	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTB	54557	broad.mit.edu	37	5	64968033	64968033	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130511549	130511549	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17795576	17795576	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105362061	105362061	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF2	153769	broad.mit.edu	37	5	145383585	145383585	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHCBP1	79801	broad.mit.edu	37	16	46655349	46655349	+	5'Flank	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146275911	146275911	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM3	57619	broad.mit.edu	37	4	77675466	77675466	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH2	6478	broad.mit.edu	37	3	150460046	150460046	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC12	89858	broad.mit.edu	37	19	52002672	52002672	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100898177	100898177	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232600887	232600887	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164724667	164724667	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164727003	164727003	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164777083	164777083	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164777759	164777759	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKI	6497	broad.mit.edu	37	1	2234312	2234312	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103703647	103703647	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103718110	103718110	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A6	345274	broad.mit.edu	37	4	87770178	87770178	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48566838	48566838	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44671910	44671910	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26821353	26821353	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45194872	45194872	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135366290	135366290	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22364938	22364938	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A12	116085	broad.mit.edu	37	11	64360942	64360942	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A12	116085	broad.mit.edu	37	11	64366241	64366241	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38316314	38316314	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A12	8604	broad.mit.edu	37	2	172691217	172691217	+	Intron	SNP	T	A	A	rs150832118	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A18	83733	broad.mit.edu	37	22	18070679	18070679	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A3	5250	broad.mit.edu	37	12	98987861	98987861	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A41	284427	broad.mit.edu	37	19	6433462	6433462	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107414696	107414696	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A3	64078	broad.mit.edu	37	9	86912137	86912137	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9836505	9836505	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B1	10237	broad.mit.edu	37	17	47781515	47781515	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A11	151258	broad.mit.edu	37	2	165765220	165765220	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47186734	47186734	+	Splice_Site	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18270328	18270328	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18280127	18280127	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A3	126969	broad.mit.edu	37	1	95290214	95290214	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8397904	8397904	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42340169	42340169	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220493218	220493218	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74479239	74479239	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24895464	24895464	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24909447	24909447	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A5	6528	broad.mit.edu	37	19	17986864	17986864	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108626831	108626831	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A8	160728	broad.mit.edu	37	12	101587480	101587480	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85264245	85264246	+	Intron	INS	-	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A7	6534	broad.mit.edu	37	5	149576274	149576274	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44467346	44467346	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170184886	170184886	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40366863	40366863	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40397428	40397428	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40656313	40656313	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40656998	40656998	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A2	6543	broad.mit.edu	37	19	47969343	47969343	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111988940	111988940	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A1	6548	broad.mit.edu	37	1	27432341	27432341	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3	6550	broad.mit.edu	37	5	480128	480128	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21349863	21349863	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21355639	21355639	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21391852	21391852	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B3	28234	broad.mit.edu	37	12	21175772	21175772	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20543244	20543244	+	Splice_Site	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD1	4086	broad.mit.edu	37	4	146463845	146463845	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106858613	106858613	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC5	23137	broad.mit.edu	37	9	72967157	72967157	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC6	79677	broad.mit.edu	37	2	17897437	17897437	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC6	79677	broad.mit.edu	37	2	17913206	17913206	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG7	9887	broad.mit.edu	37	1	183518882	183518882	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70419097	70419097	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP91	9892	broad.mit.edu	37	6	84324566	84324566	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25327915	25327915	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51569693	51569693	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51621488	51621488	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX14	57231	broad.mit.edu	37	6	86277094	86277094	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX24	28966	broad.mit.edu	37	5	122337653	122337653	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101589249	101589249	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS1	10580	broad.mit.edu	37	10	97174272	97174272	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108366972	108366972	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108434727	108434727	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108438988	108438988	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108923870	108923870	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106959779	106959780	+	Missense_Mutation	DNP	CG	TT	TT	rs146574756		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231313918	231313918	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214204937	214204937	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	215274850	215274850	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118548121	118548121	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26912271	26912271	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG6	9576	broad.mit.edu	37	10	22678165	22678165	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG7	9552	broad.mit.edu	37	17	4863265	4863265	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172641962	172641962	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172835507	172835507	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA22	84690	broad.mit.edu	37	17	3352051	3352051	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATC1	375686	broad.mit.edu	37	8	145101812	145101812	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATS1	221409	broad.mit.edu	37	6	44328107	44328107	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE4	388333	broad.mit.edu	37	17	8656562	8656562	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35659183	35659183	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35691205	35691205	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220332170	220332170	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220332280	220332280	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220341530	220341530	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220341568	220341568	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220344787	220344788	+	Frame_Shift_Ins	INS	-	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220354469	220354469	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220354645	220354645	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG7	6687	broad.mit.edu	37	16	89611205	89611205	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228882377	228882377	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	229046406	229046406	+	5'Flank	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167833911	167833911	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55652819	55652819	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158585251	158585251	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158613118	158613118	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158615169	158615169	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158626560	158626560	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158651107	158651107	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158653036	158653036	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66483327	66483327	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC3	55304	broad.mit.edu	37	20	13053194	13053194	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30740171	30740171	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRFBP1	153443	broad.mit.edu	37	5	121356095	121356095	+	Missense_Mutation	SNP	C	T	T	rs78373051	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRMS	6725	broad.mit.edu	37	20	62174615	62174615	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK1	6732	broad.mit.edu	37	6	35810348	35810348	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182785398	182785398	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149509063	149509063	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149521636	149521636	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53079446	53079446	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL1	6482	broad.mit.edu	37	8	134488273	134488273	+	5'UTR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL2	6483	broad.mit.edu	37	16	70415690	70415690	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76779596	76779596	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104136306	104136306	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBPL1	57559	broad.mit.edu	37	10	90697797	90697797	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68456587	68456587	+	Intron	DEL	T	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT5B	6777	broad.mit.edu	37	17	40354326	40354326	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23871748	23871748	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32A	202374	broad.mit.edu	37	5	146658824	146658824	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219556840	219556840	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STMN3	50861	broad.mit.edu	37	20	62273466	62273466	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX6	10228	broad.mit.edu	37	1	180933677	180933677	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130432211	130432211	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147680374	147680374	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C3	442038	broad.mit.edu	37	2	108881755	108881755	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27010460	27010460	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27023851	27023851	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27025109	27025109	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223400986	223400986	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113275161	113275161	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCE1	93426	broad.mit.edu	37	10	135369516	135369516	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115400159	115400159	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2	10388	broad.mit.edu	37	20	58490245	58490245	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85648917	85648917	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152560625	152560625	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64518958	64518958	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33403423	33403424	+	Intron	INS	-	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGR1	9145	broad.mit.edu	37	22	39760179	39760179	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33532745	33532745	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT14	255928	broad.mit.edu	37	1	210267718	210267718	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT15	83849	broad.mit.edu	37	10	46962009	46962009	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT16	83851	broad.mit.edu	37	14	62536500	62536500	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123843657	123843657	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF15	8148	broad.mit.edu	37	17	34171871	34171871	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF5L	27097	broad.mit.edu	37	1	229738095	229738095	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF7	6879	broad.mit.edu	37	5	140698604	140698604	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAL1	6886	broad.mit.edu	37	1	47685674	47685674	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118598074	118598074	+	Silent	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARP	445347	broad.mit.edu	37	7	38305109	38305109	+	Nonsense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19166166	19166166	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R3	83756	broad.mit.edu	37	1	1268367	1268367	+	Nonsense_Mutation	SNP	G	T	T	rs143311630	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R1	50834	broad.mit.edu	37	5	9630090	9630090	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38008381	38008381	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37299039	37299039	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D29	26083	broad.mit.edu	37	17	28886707	28886707	+	5'UTR	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCC	6903	broad.mit.edu	37	6	42713641	42713641	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9673185	9673185	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79277918	79277918	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX4	9496	broad.mit.edu	37	17	59556082	59556082	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152082419	152082419	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCOF1	6949	broad.mit.edu	37	5	149751720	149751720	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP10L2	401285	broad.mit.edu	37	6	167591995	167591995	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179558153	179558153	+	5'Flank	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179621306	179621306	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179659919	179659919	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104492515	104492515	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65155456	65155456	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20864809	20864809	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70450475	70450475	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50681882	50681882	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF2	7032	broad.mit.edu	37	21	43766726	43766726	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF2	7032	broad.mit.edu	37	21	43771156	43771156	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195792371	195792371	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133475876	133475876	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133494434	133494434	+	Silent	SNP	C	T	T	rs142894328		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM2	7052	broad.mit.edu	37	20	36776546	36776546	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM5	9333	broad.mit.edu	37	15	43560424	43560424	+	5'Flank	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43585556	43585556	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGS1	96764	broad.mit.edu	37	8	56723451	56723451	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133881998	133881999	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134024420	134024420	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134108322	134108322	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD1	55901	broad.mit.edu	37	13	52960290	52960290	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11632780	11632780	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137928425	137928425	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138400070	138400071	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIA1	7072	broad.mit.edu	37	2	70443655	70443655	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32537392	32537392	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155485821	155485821	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156381792	156381792	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84202840	84202840	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82269041	82269041	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82323190	82323190	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166999245	166999245	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35700302	35700302	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35700304	35700304	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63017352	63017352	+	Intron	SNP	G	C	C	rs148179202	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63063229	63063229	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476336	120476336	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476778	120476778	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64883491	64883491	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105361010	105361010	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105367361	105367361	+	Nonsense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68961558	68961558	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED1	11018	broad.mit.edu	37	19	10946030	10946030	+	Splice_Site	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98414014	98414014	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129566543	129566543	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	130184738	130184738	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32954040	32954040	+	Missense_Mutation	SNP	C	G	G	rs150343983	byFrequency	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32956090	32956090	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5754307	5754307	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM178	130733	broad.mit.edu	37	2	39944445	39944445	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15240919	15240919	+	Silent	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15584536	15584536	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15601446	15601446	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762366	130762366	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM225	338661	broad.mit.edu	37	11	123754007	123754007	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63A	9725	broad.mit.edu	37	1	226034840	226034842	+	In_Frame_Del	DEL	CTG	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM74	157753	broad.mit.edu	37	8	109796454	109796454	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPO	7112	broad.mit.edu	37	12	98940250	98940250	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68934442	68934442	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68934589	68934589	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19685426	19685426	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29673641	29673641	+	Frame_Shift_Del	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29757039	29757039	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29908738	29908738	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF19	55504	broad.mit.edu	37	13	24234412	24234412	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF1A	7132	broad.mit.edu	37	12	6442365	6442365	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12164553	12164553	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170811560	170811560	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNK2	10188	broad.mit.edu	37	3	195593961	195593962	+	Intron	DNP	CC	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57069468	57069468	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57077513	57077513	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI1	7135	broad.mit.edu	37	1	201382136	201382136	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74701175	74701175	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74957690	74957690	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO1	3842	broad.mit.edu	37	5	72171445	72171445	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175293685	175293685	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175332791	175332791	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175334200	175334200	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175372489	175372489	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39721125	39721125	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42635430	42635430	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189607033	189607033	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPRG1	285386	broad.mit.edu	37	3	188707188	188707188	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186308841	186308841	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20039551	20039551	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20066930	20066930	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20067795	20067795	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209951493	209951493	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209951495	209951495	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK2	66008	broad.mit.edu	37	2	202245493	202245493	+	Nonsense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141285683	141285683	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	73012611	73012611	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	73056937	73056937	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM3	10612	broad.mit.edu	37	11	6472661	6472661	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140401413	140401413	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248039227	248039227	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	895012	895012	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIT1	54802	broad.mit.edu	37	1	40313476	40313476	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72966087	72966087	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72967971	72967971	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72975657	72975657	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC1	7220	broad.mit.edu	37	3	142499758	142499758	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM7	54822	broad.mit.edu	37	15	50925278	50925278	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234872068	234872068	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV1	7442	broad.mit.edu	37	17	3474934	3474934	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV1	7442	broad.mit.edu	37	17	3477168	3477168	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV6	55503	broad.mit.edu	37	7	142569428	142569428	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV6	55503	broad.mit.edu	37	7	142571321	142571321	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51870390	51870390	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51871070	51871070	+	Missense_Mutation	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31767679	31767679	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769600	31769601	+	Nonsense_Mutation	DNP	CG	AT	AT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL5	85453	broad.mit.edu	37	8	98288962	98288962	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR2	90121	broad.mit.edu	37	X	54467179	54467179	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSK3	81629	broad.mit.edu	37	1	32829695	32829695	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231081095	231081095	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166799738	166799738	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40095152	40095152	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC27	55622	broad.mit.edu	37	2	32958990	32958990	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC29	83894	broad.mit.edu	37	4	147824814	147824814	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC9C	283237	broad.mit.edu	37	11	62502894	62502894	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC9C	283237	broad.mit.edu	37	11	62502931	62502931	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC9C	283237	broad.mit.edu	37	11	62503055	62503055	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84394841	84394841	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179399169	179399169	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179412653	179412653	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179443488	179443488	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179443726	179443726	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179447386	179447386	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179578693	179578693	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605401	179605401	+	Frame_Shift_Del	DEL	T	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179610640	179610640	+	Frame_Shift_Del	DEL	A	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179622489	179622489	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72218555	72218555	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72249262	72249263	+	Frame_Shift_Ins	INS	-	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19751540	19751540	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6495419	6495419	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFT1	7286	broad.mit.edu	37	1	151512777	151512777	+	5'Flank	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWISTNB	221830	broad.mit.edu	37	7	19738424	19738424	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWISTNB	221830	broad.mit.edu	37	7	19748335	19748335	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW3	127253	broad.mit.edu	37	1	75229748	75229748	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA1	7317	broad.mit.edu	37	X	47062972	47062972	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA7	7318	broad.mit.edu	37	3	49845456	49845456	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154238930	154238930	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q1	55585	broad.mit.edu	37	1	154524003	154524003	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109959375	109959375	+	Intron	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118243415	118243415	+	Intron	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10207066	10207066	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN1	29855	broad.mit.edu	37	16	4924548	4924548	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43252977	43252977	+	Intron	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43348568	43348568	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19486754	19486754	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19513693	19513693	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103291194	103291194	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103306085	103306085	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103354694	103354694	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62444224	62444224	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62444240	62444240	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62444306	62444306	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62444318	62444318	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62445457	62445457	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62445970	62445970	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62446042	62446042	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62446048	62446048	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN1	51035	broad.mit.edu	37	11	62446178	62446178	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN4	23190	broad.mit.edu	37	2	136505764	136505764	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70460813	70460813	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70071210	70071210	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70071213	70071213	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346329	70346329	+	3'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69964461	69964461	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35954247	35954247	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35991185	35991185	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43531672	43531672	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20352594	20352594	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54306940	54306940	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167719471	167719471	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRB	7381	broad.mit.edu	37	8	97247745	97247745	+	Missense_Mutation	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126201071	126201071	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215812410	215812410	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215956147	215956147	+	Silent	SNP	C	T	T	rs114719960	byFrequency;by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215960131	215960131	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216052364	216052364	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216222099	216222099	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216420490	216420490	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP26	83844	broad.mit.edu	37	X	132160979	132160979	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113705088	113705088	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57640629	57640629	+	Nonsense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61558393	61558393	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP48	84196	broad.mit.edu	37	1	22078012	22078012	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41000658	41000658	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31221131	31221131	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP15	84135	broad.mit.edu	37	5	72872701	72872701	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP23	84294	broad.mit.edu	37	8	117783872	117783872	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144757052	144757052	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144757093	144757093	+	Missense_Mutation	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UXS1	80146	broad.mit.edu	37	2	106729029	106729029	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	29188357	29188357	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30669530	30669530	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	32477325	32477325	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37283907	37283907	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44910246	44910246	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	91738386	91738386	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107047598	107047598	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107609380	107609380	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	15010038	15010038	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18885668	18885668	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18932674	18932674	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48442265	48442265	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48534550	48534550	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49329384	49329384	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49437229	49437229	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49455229	49455229	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49854664	49854664	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49855164	49855164	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49860461	49860461	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49898262	49898262	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55059569	55059569	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55059641	55059641	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55059885	55059885	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55069809	55069809	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55783373	55783373	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55945046	55945046	+	IGR	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216373	56216373	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56507837	56507837	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58133739	58133739	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59055668	59055668	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	62012282	62012282	+	IGR	SNP	G	T	T	rs151306435	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	74790564	74790564	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90017121	90017121	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94646588	94646588	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94647042	94647054	+	IGR	DEL	GGTGACTTTCCTG	-	-	rs141007786	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10658488	10658488	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	107665581	107665581	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499658	129499658	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	22161704	22161704	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33608480	33608480	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58377979	58377979	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	75057609	75057609	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80626689	80626689	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80704502	80704502	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80707360	80707360	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8168125	8168125	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88177350	88177350	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	97639162	97639162	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19299601	19299601	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19529340	19529340	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	38567557	38567557	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	41959316	41959316	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57747587	57747587	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86929238	86929238	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86929479	86929479	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88545496	88545496	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90824166	90824166	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19118118	19118118	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19468900	19468900	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19476426	19476426	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806973	19806973	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137699	20137699	+	IGR	SNP	C	A	A	rs76813015	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44589582	44589582	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45331480	45331480	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45335029	45335029	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54458251	54458251	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	66347727	66347727	+	IGR	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102369422	102369422	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20456633	20456633	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20482172	20482172	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22566870	22566870	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22691709	22691709	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22691919	22691919	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31127599	31127599	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50086968	50086968	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60346024	60346024	+	IGR	DEL	C	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	15457585	15457585	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	16457674	16457674	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33414075	33414075	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33414221	33414221	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33499158	33499158	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605150	33605150	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33629845	33629845	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768198	33768198	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34327744	34327744	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34660465	34660465	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52689334	52689334	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52969196	52969196	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20420408	20420408	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60318984	60318984	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14208210	14208210	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14393364	14393364	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	58331114	58331114	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22654469	22654469	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23031288	23031288	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675013	23675013	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54809154	54809154	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	56719941	56719941	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	56720452	56720452	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	9236663	9236663	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106435057	106435057	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106435213	106435213	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106435389	106435389	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	11939763	11939764	+	IGR	DNP	GC	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120114313	120114313	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146522983	146522983	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	147314310	147314310	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903339	148903339	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149047894	149047894	+	IGR	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149050377	149050377	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149092214	149092214	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149093731	149093731	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149262727	149262727	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	154350720	154350720	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164312403	164312403	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246712	166246712	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246740	166246740	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	17012546	17012546	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115499	191115499	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192216191	192216191	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	194158929	194158929	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209405824	209405824	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228636868	228636868	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242223164	242223164	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902020	247902020	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	26546882	26546882	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	38733183	38733183	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175071	39175071	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	77166454	77166454	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91489992	91489992	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32553138	32553138	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899133	10899133	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899835	10899835	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181406	11181406	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20230013	20230013	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31933236	31933236	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32007814	32007815	+	IGR	DNP	CC	AT	AT			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16341140	16341140	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405814	16405814	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17414555	17414555	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34985495	34985495	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107314965	107314965	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107579894	107579894	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	108537652	108537652	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	113611467	113611467	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130988453	130988453	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131027162	131027162	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	164009835	164009835	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	219818347	219818347	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	231437950	231437950	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	33861776	33861776	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4562346	4562346	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800120	91800120	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	11925690	11925690	+	IGR	SNP	G	T	T	rs137925487	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	132107304	132107304	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137600368	137600368	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	155831775	155831775	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166012177	166012177	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166579737	166579737	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	182178199	182178199	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	182178819	182178819	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	46184442	46184442	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75433196	75433196	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	119415030	119415030	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	125384424	125384424	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	139482905	139482905	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	179207844	179207844	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190394524	190394524	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	22595890	22595890	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	24773483	24773483	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27587497	27587497	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	28825441	28825441	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	33012982	33012982	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4086055	4086055	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57461959	57461959	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57576325	57576325	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64216169	64216169	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69991145	69991145	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70108454	70108454	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70223011	70223011	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70261332	70261332	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	81001040	81001040	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	84299084	84299084	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9386334	9386334	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9696787	9696787	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	125971986	125971986	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14961347	14961347	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14961349	14961349	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451021	15451021	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	154872183	154872183	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	177482667	177482667	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180582922	180582922	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304783	20304783	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	54153973	54153973	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	72021275	72021275	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	72021292	72021292	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7290945	7290945	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75206879	75206879	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84845649	84845649	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104465690	104465690	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	113544322	113544322	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27979678	27979678	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	56297532	56297532	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58446172	58446172	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58446916	58446916	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66804016	66804016	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10491548	10491548	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10516233	10516233	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138125900	138125900	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144708117	144708117	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	16624346	16624346	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	20629297	20629297	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	36859162	36859162	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	46039359	46039359	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48886955	48886955	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55706387	55706387	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56297393	56297393	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56570173	56570173	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665485	56665485	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665819	56665819	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57128266	57128266	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63602006	63602006	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64721543	64721543	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	66359584	66359584	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767075	9767075	+	IGR	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767308	9767308	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	100015558	100015558	+	IGR	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	13880154	13880154	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	34732057	34732057	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653562	50653562	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61851577	61851577	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7055957	7055957	+	IGR	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	70772449	70772449	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	81480538	81480538	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	85074771	85074771	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	87055484	87055484	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90255759	90255760	+	IGR	DNP	CC	AA	AA			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	120845213	120845213	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	121526167	121526167	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13987958	13987958	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30559241	30559241	+	IGR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689119	30689119	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689643	30689643	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66836749	66836749	+	IGR	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	71224453	71224453	+	IGR	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84674594	84674594	+	IGR	SNP	A	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90805055	90805055	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124460739	124460739	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127262071	127262071	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	133407366	133407366	+	IGR	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134808549	134808549	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52853324	52853324	+	IGR	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	53483609	53483609	+	IGR	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65295599	65295599	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89368559	89368559	+	IGR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92478632	92478632	+	IGR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VASH2	79805	broad.mit.edu	37	1	213134569	213134569	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	78011438	78011438	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108307697	108307697	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101197881	101197881	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837667	82837667	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82850754	82850754	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177648957	177648957	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VENTX	27287	broad.mit.edu	37	10	135051581	135051581	+	Silent	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEPH1	79674	broad.mit.edu	37	3	157178033	157178033	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219294218	219294218	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79929505	79929505	+	Nonsense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100454878	100454878	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS25	84313	broad.mit.edu	37	17	40925712	40925712	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122723133	122723133	+	Splice_Site	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4A	27183	broad.mit.edu	37	16	69350147	69350147	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17836575	17836575	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54617582	54617582	+	Frame_Shift_Del	DEL	G	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6140834	6140834	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71036223	71036223	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71142239	71142239	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR1	9948	broad.mit.edu	37	4	10079203	10079203	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74951836	74951836	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241964543	241964543	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDTC1	23038	broad.mit.edu	37	1	27618560	27618560	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	95992121	95992121	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT10B	7480	broad.mit.edu	37	12	49360250	49360250	+	Silent	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7A	7476	broad.mit.edu	37	3	13916501	13916501	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRNIP1	56897	broad.mit.edu	37	6	2770673	2770673	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32413565	32413565	+	Missense_Mutation	SNP	C	A	A	rs121907903		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	78859467	78859467	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP1	11059	broad.mit.edu	37	8	87448011	87448011	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31591561	31591561	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31599964	31599964	+	Missense_Mutation	SNP	T	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	167992503	167992503	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168101996	168101996	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168104699	168104699	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73061383	73061383	+	RNA	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56436481	56436481	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR7	343702	broad.mit.edu	37	20	30556125	30556125	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC5	7520	broad.mit.edu	37	2	217069067	217069067	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC6BP1	91419	broad.mit.edu	37	12	58347494	58347494	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC6	2547	broad.mit.edu	37	22	42024183	42024183	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLB	9942	broad.mit.edu	37	3	38454547	38454547	+	3'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17228602	17228602	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100359848	100359848	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100383678	100383678	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46577534	46577534	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H18	124245	broad.mit.edu	37	16	88694450	88694451	+	Frame_Shift_Ins	INS	-	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H7B	23264	broad.mit.edu	37	22	41737150	41737150	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC11	23318	broad.mit.edu	37	1	52923946	52923946	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC12	170261	broad.mit.edu	37	X	117960378	117960378	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111624591	111624591	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC13	54503	broad.mit.edu	37	11	19184859	19184859	+	Missense_Mutation	SNP	G	T	T	rs115205445	by1000genomes	TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99214594	99214594	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31791232	31791232	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135613823	135613823	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72004554	72004554	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77617295	77617295	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77618422	77618422	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77764421	77764421	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77767836	77767836	+	Missense_Mutation	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP37	7539	broad.mit.edu	37	9	115811584	115811584	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP82	284406	broad.mit.edu	37	19	36900715	36900715	+	5'UTR	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC3	7547	broad.mit.edu	37	X	136649858	136649858	+	Silent	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57649714	57649714	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25255428	25255428	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN5	23660	broad.mit.edu	37	7	99117525	99117525	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40438800	40438800	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6953714	6953714	+	Nonsense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6962865	6962865	+	Nonsense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF230	7773	broad.mit.edu	37	19	44515399	44515399	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74592256	74592256	+	Missense_Mutation	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF250	58500	broad.mit.edu	37	8	146107494	146107494	+	Silent	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF267	10308	broad.mit.edu	37	16	31906244	31906244	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF267	10308	broad.mit.edu	37	16	31927483	31927483	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87964645	87964646	+	Frame_Shift_Ins	INS	-	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF324B	388569	broad.mit.edu	37	19	58962953	58962953	+	5'Flank	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF335	63925	broad.mit.edu	37	20	44596133	44596133	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33B	7582	broad.mit.edu	37	10	43127492	43127492	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64159473	64159473	+	Silent	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37B	100129482	broad.mit.edu	37	10	43019018	43019018	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF416	55659	broad.mit.edu	37	19	58087211	58087211	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49559190	49559190	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF43	7594	broad.mit.edu	37	19	22018890	22018890	+	5'UTR	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22836109	22836109	+	5'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99218978	99218978	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF502	91392	broad.mit.edu	37	3	44751719	44751719	+	5'Flank	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF502	91392	broad.mit.edu	37	3	44751907	44751907	+	5'Flank	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512	84450	broad.mit.edu	37	2	27825867	27825867	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039133	31039133	+	Missense_Mutation	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039148	31039148	+	Silent	SNP	G	C	C	rs142296958		TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF570	148268	broad.mit.edu	37	19	37975731	37975731	+	Nonsense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF572	137209	broad.mit.edu	37	8	125988958	125988958	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF573	126231	broad.mit.edu	37	19	38282414	38282414	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF600	162966	broad.mit.edu	37	19	53268921	53268921	+	Silent	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF652	22834	broad.mit.edu	37	17	47376118	47376118	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363097	22363097	+	Missense_Mutation	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63726720	63726720	+	Missense_Mutation	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF684	127396	broad.mit.edu	37	1	41006196	41006196	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF711	7552	broad.mit.edu	37	X	84525621	84525621	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF773	374928	broad.mit.edu	37	19	58018006	58018006	+	Silent	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF781	163115	broad.mit.edu	37	19	38184215	38184215	+	5'Flank	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185731271	185731271	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801171	185801171	+	Missense_Mutation	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88956839	88956839	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53994115	53994116	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57766700	57766700	+	Missense_Mutation	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57829836	57829836	+	3'UTR	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21215803	21215803	+	Intron	SNP	T	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187702302	187702302	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113639463	113639463	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYX	7791	broad.mit.edu	37	7	143078840	143078840	+	Missense_Mutation	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	4005736	4005736	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30926700	30926700	+	RNA	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55063043	55063043	+	RNA	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22236760	22236760	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22337611	22337611	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22409345	22409345	+	Intron	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22975596	22975596	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22473147	22473147	+	RNA	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	74554932	74554932	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23309718	23309718	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23310461	23310461	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23414805	23414805	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	24097864	24097864	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	24102335	24102335	+	RNA	SNP	A	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36912955	36912955	+	RNA	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	179556809	179556809	+	5'Flank	SNP	C	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15399930	15399930	+	Intron	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133070598	133070598	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075547	133075547	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89231762	89231762	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90211902	90211902	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458167	90458167	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	905261	905261	+	Intron	SNP	A	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95613881	95613881	+	5'Flank	SNP	G	C	C			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180539005	180539005	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	187250682	187250682	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	33969925	33969925	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	3939220	3939220	+	5'Flank	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	3940282	3940282	+	5'Flank	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	75174200	75174200	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	79655823	79655823	+	Translation_Start_Site	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552899	100552899	+	RNA	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142032070	142032070	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142119802	142119802	+	Intron	SNP	C	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142247411	142247411	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125155679	125155679	+	Intron	SNP	G	T	T			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7808224	7808224	+	Silent	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15054995	15054995	+	Intron	SNP	C	G	G			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43828271	43828271	+	Intron	SNP	T	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66516675	66516675	+	Intron	SNP	G	A	A			TCGA-64-5781-01A-01D-1625-08	TCGA-64-5781-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
