Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCF2	10061	genome.wustl.edu	37	7	150916218	150916219	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	150916218	150916219	-	C	INS	ABCF2	NM_005692.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.949_948	p.R316fs	0.995:0.690	NULL	HMMPfam_ABC_tran,HMMSmart_AAA,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ADAMTS5	11096	genome.wustl.edu	37	21	28302261	28302261	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	21	28302261	28302261	T	C	SNP	ADAMTS5	NM_007038.3	human	genbank	58_37c	-1	reviewed	silent	c.2169	p.V723	0.009	NULL	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMSmart_SM00608,HMMPfam_ADAM_spacer1,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
APCDD1	147495	genome.wustl.edu	37	18	10471922	10471922	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	18	10471922	10471922	G	A	SNP	APCDD1	NM_153000.4	human	genbank	58_37c	+1	validated	missense	c.638	p.R213Q	1.000	NULL	NULL	-	no_errors
ARHGEF10L	55160	genome.wustl.edu	37	1	17958870	17958870	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	1	17958870	17958870	G	T	SNP	ARHGEF10L	NM_018125.3	human	genbank	58_37c	+1	validated	missense	c.1639	p.V547L	1.000	superfamily_PH domain-like	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),superfamily_WD40 repeat-like,superfamily_PH domain-like	-	no_errors
ARHGEF15	22899	genome.wustl.edu	37	17	8219162	8219162	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	17	8219162	8219162	T	A	SNP	ARHGEF15	NM_173728.2	human	genbank	58_37c	+1	reviewed	missense	c.1511	p.F504Y	1.000	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,PatternScan_DH_1,superfamily_SSF50729	-	no_errors
CCDC141	285025	genome.wustl.edu	37	2	179702153	179702153	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	2	179702153	179702153	C	G	SNP	CCDC141	NM_173648.2	human	genbank	58_37c	-1	provisional	missense	c.2068	p.V690L	0.179	NULL	NULL	-	no_errors
CCR2	1231	genome.wustl.edu	37	3	46399864	46399864	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	3	46399864	46399864	A	T	SNP	CCR2	NM_001123041.2	human	genbank	58_37c	+1	validated	missense	c.846	p.Q282H	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
CELSR2	1952	genome.wustl.edu	37	1	109794101	109794101	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	1	109794101	109794101	C	T	SNP	CELSR2	NM_001408.2	human	genbank	58_37c	+1	reviewed	missense	c.1400	p.T467I	0.126	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,HMMSmart_TNFR,HMMSmart_LamG,HMMPfam_HRM,HMMSmart_HormR,HMMSmart_EGF_CA,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_SSF57196	-	no_errors
CLEC17A	388512	genome.wustl.edu	37	19	14705309	14705309	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	19	14705309	14705309	C	T	SNP	CLEC17A	NM_207390.2	human	genbank	58_37c	+1	validated	silent	c.207	p.T69	0.000	NULL	HMMPfam_Lectin_C,superfamily_C-type lectin-like	-	no_errors
COL6A6	131873	genome.wustl.edu	37	3	130327755	130327755	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	3	130327755	130327755	G	C	SNP	COL6A6	NM_001102608.1	human	genbank	58_37c	+1	provisional	missense	c.4699	p.G1567R	0.545	NULL	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Collagen,superfamily_vWA-like	-	no_errors
DLGAP4	22839	genome.wustl.edu	37	20	35128703	35128703	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	20	35128703	35128703	C	T	SNP	DLGAP4	NM_014902.4	human	genbank	58_37c	+1	reviewed	missense	c.2192	p.P731L	0.992	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors
DNAH14	127602	genome.wustl.edu	37	1	225266935	225266935	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	1	225266935	225266935	G	A	SNP	DNAH14	NM_001373.1	human	genbank	58_37c	+1	validated	silent	c.2451	p.L817	0.092	NULL	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_RVT_thumb,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DSCAML1	57453	genome.wustl.edu	37	11	117376409	117376409	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	117376409	117376409	A	G	SNP	DSCAML1	NM_020693.2	human	genbank	58_37c	-1	provisional	missense	c.2002	p.S668P	1.000	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DYNC1H1	1778	genome.wustl.edu	37	14	102514950	102514950	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	14	102514950	102514950	A	G	SNP	DYNC1H1	NM_001376.4	human	genbank	58_37c	+1	reviewed	missense	c.13316	p.E4439G	1.000	HMMPfam_Dynein_heavy	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_SSF52540	-	no_errors
EIF4ENIF1	56478	genome.wustl.edu	37	22	31836773	31836773	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	22	31836773	31836773	G	C	SNP	EIF4ENIF1	NM_019843.3	human	genbank	58_37c	-1	reviewed	missense	c.2633	p.P878R	0.774	NULL	HMMPfam_EIF4E-T	-	no_errors
ENSG00000186082	0	genome.wustl.edu	37	11	35883042	35883042	+	Missense_Mutation	SNP	A	A	G	rs71480090	byCluster;by1000genomes	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	35883042	35883042	A	G	SNP	ENSG00000186082	ENST00000333983	human	ensembl	58_37c	-1	known	missense	c.56	p.V19A	0.001	NULL	HMMPfam_Filament	-	no_errors
ENSG00000231497	0	genome.wustl.edu	37	8	86568004	86568004	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	8	86568004	86568004	G	C	SNP	ENSG00000231497	ENST00000418228	human	ensembl	58_37c	-1	known	missense	c.610	p.L204V	0.971	NULL	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T	-	no_errors
ENSG00000237362	0	genome.wustl.edu	37	15	80736697	80736698	+	Frame_Shift_Del	DEL	GT	GT	-	rs111434302	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	GT	GT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	15	80736697	80736698	GT	-	DEL	ENSG00000237362	ENST00000447682	human	ensembl	58_37c	-1	known	frame_shift_del	c.535_534	p.P179fs	0.557:0.569	NULL	NULL	-	no_errors
ENSG00000245008	0	genome.wustl.edu	37	11	128552085	128552085	+	RNA	SNP	C	T	T	rs145242943	by1000genomes	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	128552085	128552085	C	T	SNP	ENSG00000245008	ENST00000501648	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors
ENSG00000248078	0	genome.wustl.edu	37	18	43915008	43915009	+	RNA	INS	-	-	GT	rs35886766	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	18	43915008	43915009	-	GT	INS	ENSG00000248078	ENST00000422709	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.051:0.062	-	-	-	no_errors
ERC2	26059	genome.wustl.edu	37	3	56468977	56468977	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	3	56468977	56468977	C	T	SNP	ERC2	NM_015576.1	human	genbank	58_37c	-1	validated	missense	c.59	p.R20H	1.000	NULL	superfamily_Prefoldin,HMMPfam_Cast	-	no_errors
ERV3	2086	genome.wustl.edu	37	7	64452362	64452362	+	Missense_Mutation	SNP	C	C	G	rs140714007	by1000genomes	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	64452362	64452362	C	G	SNP	ERV3	NM_001007253.3	human	genbank	58_37c	-1	reviewed	missense	c.1043	p.R348P	0.901	NULL	NULL	-	no_errors
FAM155A	728215	genome.wustl.edu	37	13	108518036	108518036	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	13	108518036	108518036	G	T	SNP	FAM155A	NM_001080396.2	human	genbank	58_37c	-1	validated	missense	c.909	p.D303E	1.000	NULL	NULL	-	no_errors
FAM184A	79632	genome.wustl.edu	37	6	119301436	119301436	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	6	119301436	119301436	G	C	SNP	FAM184A	NM_024581.4	human	genbank	58_37c	-1	validated	missense	c.2168	p.T723R	1.000	NULL	NULL	-	no_errors
FAM69C	125704	genome.wustl.edu	37	18	72109212	72109212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	18	72109212	72109212	G	A	SNP	FAM69C	NM_001044369.2	human	genbank	58_37c	-1	validated	missense	c.1016	p.A339V	0.984	NULL	NULL	-	no_errors
FAM90A12	645879	genome.wustl.edu	37	8	7885818	7885818	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	8	7885818	7885818	G	A	SNP	FAM90A12	XM_928853.4	human	genbank	58_37c	-1	model	silent	c.735	p.S245	0.005	NULL	superfamily_SSF57756	-	no_errors
FBN3	84467	genome.wustl.edu	37	19	8174244	8174244	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	19	8174244	8174244	C	G	SNP	FBN3	NM_032447.3	human	genbank	58_37c	-1	reviewed	missense	c.4485	p.E1495D	0.256	superfamily_TB module/8-cys domain	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FLRT1	23769	genome.wustl.edu	37	11	63884894	63884894	+	Silent	SNP	C	C	T	rs141342857	byFrequency	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	63884894	63884894	C	T	SNP	FLRT1	NM_013280.4	human	genbank	58_37c	+1	reviewed	silent	c.1155	p.G385	0.000	NULL	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_fn3,HMMSmart_SM00364,superfamily_L domain-like	-	no_errors
HEATR5A	25938	genome.wustl.edu	37	14	31763097	31763097	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	14	31763097	31763097	G	A	SNP	HEATR5A	NM_015473.2	human	genbank	58_37c	-1	validated	missense	c.4954	p.R1652C	1.000	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
HEXB	3074	genome.wustl.edu	37	5	73981270	73981270	+	Missense_Mutation	SNP	T	T	C	rs820878	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	5	73981270	73981270	T	C	SNP	HEXB	NM_000521.3	human	genbank	58_37c	+1	reviewed	missense	c.185	p.L62S	0.004	superfamily_beta-N-acetylhexosaminidase-like domain	HMMPfam_Glyco_hydro_20b,HMMPfam_Glyco_hydro_20,superfamily_(Trans)glycosidases,superfamily_beta-N-acetylhexosaminidase-like domain	-	no_errors
HIST1H2AD	3013	genome.wustl.edu	37	6	26199312	26199312	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	6	26199312	26199312	C	A	SNP	HIST1H2AD	NM_021065.2	human	genbank	58_37c	-1	reviewed	missense	c.160	p.A54S	0.999	HMMSmart_H2A,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_H2A,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HSPA2	3306	genome.wustl.edu	37	14	65007620	65007620	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	14	65007620	65007620	G	A	SNP	HSPA2	NM_021979.3	human	genbank	58_37c	+1	validated	missense	c.53	p.C18Y	1.000	HMMPfam_HSP70,superfamily_SSF53067	HMMPfam_HSP70,PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934,superfamily_SSF53067	-	no_errors
HYAL2	8692	genome.wustl.edu	37	3	50357070	50357070	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	3	50357070	50357070	G	C	SNP	HYAL2	NM_003773.4	human	genbank	58_37c	-1	reviewed	missense	c.851	p.A284G	0.490	HMMPfam_Glyco_hydro_56,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_56,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_(Trans)glycosidases	-	no_errors
KRTAP10-1	386677	genome.wustl.edu	37	21	45959988	45959988	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	21	45959988	45959988	A	T	SNP	KRTAP10-1	NM_198691.2	human	genbank	58_37c	-1	reviewed	missense	c.46	p.S16T	0.109	NULL	HMMPfam_Keratin_B2	-	no_errors
LAMA5	3911	genome.wustl.edu	37	20	60885879	60885879	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	20	60885879	60885879	C	G	SNP	LAMA5	NM_005560.3	human	genbank	58_37c	-1	reviewed	missense	c.10288	p.V3430L	0.000	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	HMMPfam_Laminin_B,PatternScan_TNFR_NGFR_1,HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Galactose-binding domain-like,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00281,superfamily_EGF/Laminin	-	no_errors
LOC100129118	0	genome.wustl.edu	37	19	14903297	14903297	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	19	14903297	14903297	T	C	SNP	LOC100129118	XM_001726779.2	human	genbank	58_37c	+1	model	silent	c.168	p.Y56	0.998	NULL	HMMPfam_DUF1242	-	no_errors
LOC731932	731932	genome.wustl.edu	37	13	47033313	47033313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	13	47033313	47033313	C	T	SNP	LOC731932	XM_001716667.2	human	genbank	58_37c	-1	model	missense	c.236	p.G79D	0.004	NULL	NULL	-	no_errors
LRRC41	10489	genome.wustl.edu	37	1	46768864	46768864	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	1	46768864	46768864	G	C	SNP	LRRC41	NM_006369.4	human	genbank	58_37c	-1	validated	missense	c.131	p.P44R	1.000	NULL	HMMSmart_SM00368,superfamily_RNI-like	-	no_errors
LRRK2	120892	genome.wustl.edu	37	12	40745469	40745469	+	Silent	SNP	C	C	T	rs34869625	byCluster;byFrequency	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	12	40745469	40745469	C	T	SNP	LRRK2	NM_198578.3	human	genbank	58_37c	+1	reviewed	silent	c.6510	p.G2170	0.996	superfamily_WD40_like	PatternScan_RCC1_2,HMMPfam_LRR_1,HMMSmart_WD40,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_WD40_like,HMMPfam_Miro,superfamily_ARM-type_fold,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF52058,superfamily_SSF52540	-	no_errors
MAGI2	9863	genome.wustl.edu	37	7	77762343	77762343	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	77762343	77762343	C	G	SNP	MAGI2	NM_012301.3	human	genbank	58_37c	-1	reviewed	missense	c.3066	p.E1022D	1.000	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MDS1	4197	genome.wustl.edu	37	3	168833597	168833597	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	3	168833597	168833597	G	T	SNP	MECOM	ENST00000494292	human	ensembl	58_37c	-1	known	missense	c.2063	p.A688D	1.000	NULL	HMMSmart_SM00317,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
MLL	4297	genome.wustl.edu	37	11	118375750	118375750	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	118375750	118375750	A	C	SNP	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	missense	c.9134	p.K3045T	1.000	NULL	PatternScan_HMGI_Y,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,PatternScan_RECR,HMMPfam_AT_hook,PatternScan_EF_HAND_1,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151873388	151873390	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	151873388	151873390	TTC	-	DEL	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.9150_9148	p.E3050in_frame_del	0.989:1.000:1.000	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
NARS2	79731	genome.wustl.edu	37	11	78154716	78154716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	78154716	78154716	C	T	SNP	NARS2	NM_024678.4	human	genbank	58_37c	-1	validated	missense	c.1253	p.R418H	0.423	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	HMMPfam_tRNA-synt_2,HMMPfam_tRNA_anti,superfamily_Nucleic acid-binding proteins,superfamily_Class II aaRS and biotin synthetases	-	no_errors
NDUFS2	4720	genome.wustl.edu	37	1	161183954	161183954	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	1	161183954	161183954	G	A	SNP	NDUFS2	NM_004550.4	human	genbank	58_37c	+1	reviewed	missense	c.1363	p.D455N	1.000	HMMPfam_Complex1_49kDa,superfamily_SSF56762	HMMPfam_Complex1_49kDa,PatternScan_COMPLEX1_49K,superfamily_SSF56762	-	no_errors
NLRP5	126206	genome.wustl.edu	37	19	56569642	56569642	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	19	56569642	56569642	G	A	SNP	NLRP5	NM_153447.4	human	genbank	58_37c	+1	reviewed	silent	c.3336	p.E1112	0.009	superfamily_SSF52047	HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH_like,superfamily_SSF52047,superfamily_SSF52540	-	no_errors
OR52N2	390077	genome.wustl.edu	37	11	5842404	5842404	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	11	5842404	5842404	C	G	SNP	OR52N2	NM_001005174.1	human	genbank	58_37c	+1	provisional	missense	c.839	p.A280G	0.755	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PARP8	79668	genome.wustl.edu	37	5	50091197	50091197	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	5	50091197	50091197	C	A	SNP	PARP8	NM_024615.3	human	genbank	58_37c	+1	validated	silent	c.1374	p.T458	1.000	NULL	HMMPfam_PARP,superfamily_ADP-ribosylation	-	no_errors
PPP1R9A	55607	genome.wustl.edu	37	7	94750069	94750069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	94750069	94750069	C	T	SNP	PPP1R9A	NM_017650.2	human	genbank	58_37c	+1	validated	missense	c.1574	p.A525V	1.000	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2	-	no_errors
PTCHD3	374308	genome.wustl.edu	37	10	27687828	27687828	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	10	27687828	27687828	A	C	SNP	PTCHD3	NM_001034842.3	human	genbank	58_37c	-1	validated	missense	c.1699	p.C567G	0.998	HMMPfam_Patched	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
RAE1	8480	genome.wustl.edu	37	20	55949798	55949798	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	20	55949798	55949798	T	A	SNP	RAE1	NM_001015885.1	human	genbank	58_37c	+1	reviewed	missense	c.961	p.C321S	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
RBM33	155435	genome.wustl.edu	37	7	155537935	155537935	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	155537935	155537935	G	T	SNP	RBM33	NM_053043.2	human	genbank	58_37c	+1	validated	missense	c.2618	p.R873I	1.000	NULL	HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RDH14	57665	genome.wustl.edu	37	2	18736890	18736890	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	2	18736890	18736890	T	C	SNP	RDH14	NM_020905.3	human	genbank	58_37c	-1	validated	missense	c.578	p.K193R	1.000	superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
RRP12	23223	genome.wustl.edu	37	10	99133604	99133604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	10	99133604	99133604	C	T	SNP	RRP12	NM_015179.3	human	genbank	58_37c	-1	validated	missense	c.1846	p.D616N	1.000	HMMPfam_NUC173,superfamily_ARM repeat	HMMPfam_NUC173,superfamily_ARM repeat	-	no_errors
SFI1	9814	genome.wustl.edu	37	22	31942922	31942922	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	22	31942922	31942922	G	A	SNP	SFI1	NM_001007467.1	human	genbank	58_37c	+1	validated	silent	c.414	p.E138	0.998	NULL	NULL	-	no_errors
SHPK	23729	genome.wustl.edu	37	17	3524661	3524661	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	17	3524661	3524661	G	A	SNP	SHPK	NM_013276.2	human	genbank	58_37c	-1	reviewed	silent	c.693	p.A231	0.000	HMMPfam_FGGY_N,superfamily_Actin-like ATPase domain	HMMPfam_FGGY_N,superfamily_Actin-like ATPase domain	-	no_errors
SNAP91	9892	genome.wustl.edu	37	6	84366485	84366485	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	6	84366485	84366485	T	C	SNP	SNAP91	NM_014841.2	human	genbank	58_37c	-1	validated	missense	c.646	p.I216V	1.000	HMMPfam_ANTH,superfamily_GAT-like domain	superfamily_ENTH/VHS domain,HMMPfam_ANTH,HMMSmart_SM00273,superfamily_GAT-like domain	-	no_errors
SNX25	83891	genome.wustl.edu	37	4	186180136	186180136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	4	186180136	186180136	G	A	SNP	SNX25	NM_031953.2	human	genbank	58_37c	+1	validated	missense	c.157	p.V53M	0.998	HMMPfam_PXA	HMMPfam_RGS,HMMSmart_RGS,HMMPfam_PX,HMMSmart_PX,superfamily_PX,HMMPfam_PXA,HMMPfam_Nexin_C,superfamily_Regulat_G_prot_signal_superfam	-	no_errors
SORCS2	57537	genome.wustl.edu	37	4	7725534	7725534	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	4	7725534	7725534	C	T	SNP	SORCS2	ENST00000507866	human	ensembl	58_37c	+1	known	missense	c.2434	p.R812W	0.071	HMMPfam_PKD,HMMSmart_SM00089,superfamily_PKD domain	HMMPfam_PKD,HMMSmart_SM00089,superfamily_PKD domain,HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
SUZ12	23512	genome.wustl.edu	37	17	30267315	30267315	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	17	30267315	30267315	G	C	SNP	SUZ12	NM_015355.2	human	genbank	58_37c	+1	reviewed	missense	c.285	p.Q95H	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,HMMPfam_VEFS-Box	-	no_errors
TAF1L	138474	genome.wustl.edu	37	9	32634818	32634818	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	9	32634818	32634818	G	A	SNP	TAF1L	NM_153809.2	human	genbank	58_37c	-1	provisional	nonsense	c.760	p.R254*	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
TCHHL1	126637	genome.wustl.edu	37	1	152058008	152058008	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	1	152058008	152058008	T	A	SNP	TCHHL1	NM_001008536.1	human	genbank	58_37c	-1	provisional	missense	c.2150	p.Q717L	0.025	NULL	PatternScan_S100_CABP,HMMPfam_S_100,superfamily_SSF47473	-	no_errors
TCTN2	79867	genome.wustl.edu	37	12	124191572	124191572	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	12	124191572	124191572	G	A	SNP	TCTN2	NM_024809.3	human	genbank	58_37c	+1	validated	missense	c.1936	p.E646K	1.000	NULL	HMMPfam_DUF1619	-	no_errors
TMEM195	392636	genome.wustl.edu	37	7	15584395	15584395	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	7	15584395	15584395	A	G	SNP	TMEM195	NM_001004320.1	human	genbank	58_37c	-1	provisional	splice_site	c.409+2	e3+2	1.000	-	-	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7574003	7574003	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	17	7574003	7574003	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.1024	p.R342*	0.307	HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
UBQLN1	29979	genome.wustl.edu	37	9	86292621	86292649	+	Splice_Site	DEL	CCTGAGTTGTTAAAAGCATACCTCCTACT	CCTGAGTTGTTAAAAGCATACCTCCTACT	-	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	CCTGAGTTGTTAAAAGCATACCTCCTACT	CCTGAGTTGTTAAAAGCATACCTCCTACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	9	86292621	86292649	CCTGAGTTGTTAAAAGCATACCTCCTACT	-	DEL	UBQLN1	NM_013438.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1126_1098	p.V367fs	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.027:0.031:0.025:0.000:0.000:0.000:0.000:0.161:0.140:0.934:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMPfam_UBA,HMMPfam_ubiquitin,HMMSmart_SM00213,HMMSmart_SM00727,superfamily_UBA-like,HMMSmart_SM00165,superfamily_Ubiquitin-like	-	no_errors
UHRF1BP1L	23074	genome.wustl.edu	37	12	100451829	100451829	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	12	100451829	100451829	G	C	SNP	UHRF1BP1L	NM_015054.1	human	genbank	58_37c	-1	validated	missense	c.3226	p.L1076V	1.000	NULL	NULL	-	no_errors
UNC119	9094	genome.wustl.edu	37	17	26875691	26875691	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	17	26875691	26875691	T	C	SNP	UNC119	NM_005148.3	human	genbank	58_37c	-1	reviewed	missense	c.253	p.K85E	1.000	HMMPfam_GMP_PDE_delta,superfamily_E set domains	HMMPfam_GMP_PDE_delta,superfamily_E set domains	-	no_errors
VASH1	22846	genome.wustl.edu	37	14	77244414	77244414	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	14	77244414	77244414	G	T	SNP	VASH1	NM_014909.4	human	genbank	58_37c	+1	validated	missense	c.1025	p.R342L	1.000	NULL	NULL	-	no_errors
ZNF430	80264	genome.wustl.edu	37	19	21240799	21240799	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	19	21240799	21240799	C	A	SNP	ZNF430	NM_025189.3	human	genbank	58_37c	+1	validated	nonsense	c.1685	p.S562*	0.969	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF524	147807	genome.wustl.edu	37	19	56113589	56113589	+	Silent	SNP	G	C	C	novel	unknown	TCGA-A2-A0YJ-01A-11D-A10G-09	TCGA-A2-A0YJ-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3fe8e99f-dce5-4df9-983e-efe63d56bdd5	0fb6d352-b236-4ecf-9d79-39d49a387277	19	56113589	56113589	G	C	SNP	ZNF524	NM_153219.2	human	genbank	58_37c	+1	validated	silent	c.111	p.G37	0.016	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,HMMPfam_AT_hook,HMMSmart_AT_hook,superfamily_SSF57667	-	no_errors
