Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	
ADRA2B	151	hgsc.bcm.edu	37	2	96780986	96780987	+	In_Frame_Ins	INS	-	-	TCCTCCTCT	rs34667759	bycluster;by1000genomes	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ALS2CR11	151254	hgsc.bcm.edu	37	2	202430456	202430456	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ANKRD55	79722	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	55407417	55407417	+	Silent	SNP	A	A	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ASB10	136371	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	150873237	150873237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ASPM	259266	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	197093276	197093276	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
BRCA2	675	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	13	32944606	32944606	+	Missense_Mutation	SNP	C	C	G	rs80359087		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
C1orf106	55765	hgsc.bcm.edu;ucsc.edu	37	1	200880644	200880647	+	Frame_Shift_Del	DEL	CACT	CACT	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	CACT	CACT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
C1orf26	0	hgsc.bcm.edu;ucsc.edu	37	1	185171842	185171844	+	In_Frame_Del	DEL	AAG	AAG	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	AAG	AAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CACNA1H	8912	broad.mit.edu;hgsc.bcm.edu	37	16	1254064	1254064	+	Missense_Mutation	SNP	C	C	T	rs145376050	by1000genomes	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CCDC163P	126661	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	45962262	45962262	+	RNA	SNP	G	G	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CCDC48	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	128757716	128757716	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CCDC57	284001	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	80156290	80156290	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CCDC59	29080	broad.mit.edu;hgsc.bcm.edu	37	12	82746875	82746875	+	RNA	SNP	T	T	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CCDC60	160777	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	119909965	119909965	+	Silent	SNP	T	T	C	rs139079166	bycluster;byfrequency;by1000genomes	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CDCP2	200008	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	54610216	54610216	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CDH6	1004	hgsc.bcm.edu;ucsc.edu	37	5	31305299	31305302	+	Frame_Shift_Del	DEL	AAGA	AAGA	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	AAGA	AAGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CS	1431	hgsc.bcm.edu	37	12	56676232	56676232	+	Missense_Mutation	SNP	T	T	C	rs77708038	bycluster	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CSMD3	114788	broad.mit.edu;hgsc.bcm.edu	37	8	113246594	113246594	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
DCAF13	25879	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	104427735	104427735	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
DERL3	91319	broad.mit.edu;ucsc.edu	37	22	24179339	24179339	+	Missense_Mutation	SNP	T	C	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
EPS8	2059	broad.mit.edu;hgsc.bcm.edu	37	12	15822749	15822749	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ERO1L	30001	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	53118958	53118958	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
EXOSC10	5394	hgsc.bcm.edu;ucsc.edu	37	1	11155902	11155902	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
FAM47B	170062	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	34962088	34962088	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
FN1	2335	broad.mit.edu;hgsc.bcm.edu	37	2	216298131	216298131	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
GRIK1	2897	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	21	30961307	30961307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
HMCN1	83872	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	186158774	186158774	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	WXS	PGM			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
HTR1A	3350	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	63257288	63257288	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
IL17RB	55540	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	53898830	53898830	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ILF3	3609	hgsc.bcm.edu	37	19	10793910	10793911	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
IMPG2	50939	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	100949947	100949947	+	Silent	SNP	A	A	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
INADL	10207	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	62288627	62288627	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
INPP5F	22876	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	121587100	121587100	+	Silent	SNP	T	T	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
IQGAP1	8826	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	91025444	91025444	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
KIF25	3834	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	168440859	168440859	+	Silent	SNP	G	G	A	rs147571413	byfrequency;alternate_allele	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
LEO1	123169	hgsc.bcm.edu	37	15	52246708	52246708	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
LGSN	51557	broad.mit.edu;ucsc.edu	37	6	63990712	63990712	+	Nonsense_Mutation	SNP	A	C	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
LMO7	4008	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	13	76369561	76369561	+	Silent	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
LRIT1	26103	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	85991773	85991773	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
LRRN3	54674	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	110764578	110764578	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MANEAL	149175	broad.mit.edu;hgsc.bcm.edu	37	1	38260262	38260262	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MAP3K12	7786	broad.mit.edu;hgsc.bcm.edu	37	12	53880961	53880961	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MAP3K15	389840	hgsc.bcm.edu	37	X	19387229	19387230	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MFAP5	8076	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	8802129	8802129	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MID1	4281	broad.mit.edu;hgsc.bcm.edu	37	X	10437719	10437719	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MLL2	8085	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	49442951	49442951	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MSR1	4481	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	15967631	15967631	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	WXS	PGM			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MYO1D	4642	broad.mit.edu;hgsc.bcm.edu	37	17	30986144	30986144	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MYOM1	8736	broad.mit.edu;hgsc.bcm.edu	37	18	3155065	3155065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
NCAPG2	54892	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	158447321	158447321	+	Silent	SNP	T	T	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
NLRP7	199713	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	55451743	55451743	+	Silent	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
NOS1	4842	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	117672374	117672374	+	Silent	SNP	A	A	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
NYNRIN	57523	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	24878537	24878537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
OR1I1	126370	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	15198108	15198108	+	Missense_Mutation	SNP	G	G	A	rs146090785	byfrequency	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
OR2L2	26246	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	248201987	248201987	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
OR5H2	79310	broad.mit.edu;hgsc.bcm.edu	37	3	98001737	98001737	+	Silent	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PHF2	5253	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	96415638	96415638	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PPIL4	85313	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	149838510	149838510	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	WXS	PGM			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PPP1R7	5510	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	242102749	242102749	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PRG3	10394	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	57147060	57147060	+	Silent	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PTEN	5728	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	89712017	89712017	+	Splice_Site	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PTEN	5728	hgsc.bcm.edu	37	10	89692949	89692949	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PTK2B	2185	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	27301762	27301762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PTPRZ1	5803	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	121668608	121668608	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
RAB11FIP1	80223	broad.mit.edu;hgsc.bcm.edu	37	8	37756812	37756812	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
RCC1	1104	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	28858360	28858360	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
RIF1	55183	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	152324541	152324541	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
RNF17	56163	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	13	25353868	25353868	+	Silent	SNP	T	T	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
RPE65	6121	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	68906539	68906539	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
SHMT2	6472	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	57627609	57627609	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
SPRY4	81848	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	141694601	141694601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
SULT2A1	6822	hgsc.bcm.edu;ucsc.edu	37	19	48385414	48385415	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
SYCP2L	221711	hgsc.bcm.edu;ucsc.edu	37	6	10955449	10955449	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TAF1	6872	broad.mit.edu;hgsc.bcm.edu	37	X	70643015	70643015	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TDRD10	126668	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	154493879	154493879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TFB1M	51106	hgsc.bcm.edu;ucsc.edu	37	6	155635515	155635515	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TMPRSS3	64699	hgsc.bcm.edu;ucsc.edu	37	21	43804123	43804130	+	Frame_Shift_Del	DEL	CTAAAGCG	CTAAAGCG	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	CTAAAGCG	CTAAAGCG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TPT1	7178	broad.mit.edu;hgsc.bcm.edu	37	13	45914269	45914269	+	Silent	SNP	A	A	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TRAM1L1	133022	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	4	118005505	118005505	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TTBK2	146057	hgsc.bcm.edu	37	15	43038015	43038032	+	In_Frame_Del	DEL	GGCTTACTCTTCCCTTGG	GGCTTACTCTTCCCTTGG	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	GGCTTACTCTTCCCTTGG	GGCTTACTCTTCCCTTGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TTN	7273	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	179566270	179566270	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TTN	7273	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	179584416	179584416	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TXNDC11	51061	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	11773280	11773280	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
USH2A	7399	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	215955404	215955404	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
VHL	7428	hgsc.bcm.edu;ucsc.edu	37	3	10191522	10191525	+	Frame_Shift_Del	DEL	CTGA	CTGA	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	CTGA	CTGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
WASL	8976	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	123332672	123332672	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
WDHD1	11169	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	55448374	55448374	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
YSK4	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	135744718	135744718	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ZBTB10	65986	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	81399984	81399984	+	Silent	SNP	T	T	C	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ZFP112	7771	hgsc.bcm.edu;ucsc.edu	37	19	44832084	44832084	+	Silent	SNP	C	C	T	rs61733035	bycluster;byfrequency;by1000genomes	TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ZNF347	84671	hgsc.bcm.edu;ucsc.edu	37	19	53645671	53645671	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ZSCAN2	54993	hgsc.bcm.edu;ucsc.edu	37	15	85164518	85164519	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ADAMTSL5	339366	broad.mit.edu	37	19	1508527	1508527	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
ATP1A4	480	broad.mit.edu	37	1	160143468	160143468	+	Missense_Mutation	SNP	C	G	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CAPN1	823	broad.mit.edu	37	11	64955442	64955442	+	Frame_Shift_Del	DEL	A	-	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
CT47B1	643311	broad.mit.edu	37	X	120009353	120009353	+	Missense_Mutation	SNP	C	G	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
INTS1	26173	broad.mit.edu	37	7	1543553	1543553	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
LOC285501	285501	broad.mit.edu	37	4	178911782	178911782	+	RNA	SNP	A	G	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MAP3K9	4293	broad.mit.edu	37	14	71197381	71197381	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MED6	10001	broad.mit.edu	37	14	71067337	71067337	+	Silent	SNP	G	A	A	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
MUC4	4585	broad.mit.edu	37	3	195511925	195511925	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
PTPN21	11099	broad.mit.edu	37	14	88946198	88946198	+	Missense_Mutation	SNP	T	G	G	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
TRIM67	440730	broad.mit.edu	37	1	231298765	231298765	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
Unknown	0	broad.mit.edu	37	9	68413569	68413569	+	RNA	SNP	C	T	T	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
Unknown	0	broad.mit.edu	37	9	68413605	68413606	+	RNA	DEL	CT	-	-	novel		TCGA-A3-3308-01A-01D-0966-08	TCGA-A3-3308-11A-01D-0966-08	CT	CT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	30f89396-6b77-4592-908c-39cc24a829da	0d282a88-0ebd-4c51-b3f1-72b11dcbcbdb	
