Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADA	100	genome.wustl.edu	37	20	43249699	43249699	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	20	43249699	43249699	T	C	SNP	ADA	NM_000022.2	human	genbank	58_37c	-1	reviewed	missense	c.935	p.K312R	0.004	HMMPfam_A_deaminase,superfamily_SSF51556	HMMPfam_A_deaminase,PatternScan_A_DEAMINASE,superfamily_SSF51556	-	no_errors
APOB	338	genome.wustl.edu	37	2	21234125	21234125	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	2	21234125	21234125	A	T	SNP	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	missense	c.5615	p.I1872N	0.076	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
ATF7IP	55729	genome.wustl.edu	37	12	14631311	14631311	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	12	14631311	14631311	G	A	SNP	ATF7IP	NM_018179.3	human	genbank	58_37c	+1	validated	missense	c.3002	p.R1001Q	1.000	NULL	HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
C11orf41	25758	genome.wustl.edu	37	11	33628300	33628300	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	11	33628300	33628300	A	C	SNP	C11orf41	NM_012194.1	human	genbank	58_37c	+1	validated	missense	c.4120	p.T1374P	0.207	NULL	NULL	-	no_errors
C1orf116	79098	genome.wustl.edu	37	1	207196236	207196236	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	1	207196236	207196236	A	G	SNP	C1orf116	NM_023938.5	human	genbank	58_37c	-1	validated	silent	c.873	p.A291	0.000	NULL	NULL	-	no_errors
CD1D	912	genome.wustl.edu	37	1	158151458	158151458	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	1	158151458	158151458	G	A	SNP	CD1D	NM_001766.3	human	genbank	58_37c	+1	reviewed	missense	c.275	p.R92Q	0.000	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog	HMMPfam_MHC_I,HMMPfam_C1-set,HMMSmart_IGc1,superfamily_MHC_I/II-like_Ag-recog,superfamily_SSF48726	-	no_errors
CELSR2	1952	genome.wustl.edu	37	1	109814973	109814973	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	1	109814973	109814973	A	C	SNP	CELSR2	NM_001408.2	human	genbank	58_37c	+1	reviewed	missense	c.8000	p.H2667P	1.000	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,HMMSmart_TNFR,HMMSmart_LamG,HMMPfam_HRM,HMMSmart_HormR,HMMSmart_EGF_CA,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_SSF57196	-	no_errors
CLCN4	1183	genome.wustl.edu	37	X	10176393	10176393	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	X	10176393	10176393	C	T	SNP	CLCN4	NM_001830.3	human	genbank	58_37c	+1	reviewed	silent	c.1152	p.A384	1.000	HMMPfam_Voltage_CLC,superfamily_Clc chloride channel	HMMPfam_CBS,HMMSmart_SM00116,HMMPfam_Voltage_CLC,superfamily_Clc chloride channel,superfamily_CBS-domain	-	no_errors
CSHL1	1444	genome.wustl.edu	37	17	61988207	61988207	+	Missense_Mutation	SNP	C	C	T	rs137902098	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	17	61988207	61988207	C	T	SNP	CSHL1	NM_022579.1	human	genbank	58_37c	-1	reviewed	missense	c.88	p.V30I	0.612	HMMPfam_Hormone_1,superfamily_4-helical cytokines	HMMPfam_Hormone_1,superfamily_4-helical cytokines,PatternScan_SOMATOTROPIN_2	-	no_errors
DDX10	1662	genome.wustl.edu	37	11	108722938	108722938	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	11	108722938	108722938	T	G	SNP	DDX10	NM_004398.2	human	genbank	58_37c	+1	reviewed	splice_site	c.2304+2	e16+2	1.000	-	-	-	no_errors
EGF	1950	genome.wustl.edu	37	4	110901145	110901145	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	4	110901145	110901145	G	A	SNP	EGF	NM_001963.4	human	genbank	58_37c	+1	reviewed	missense	c.2071	p.A691T	0.993	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
ELOVL3	83401	genome.wustl.edu	37	10	103986408	103986408	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	10	103986408	103986408	T	G	SNP	ELOVL3	NM_152310.1	human	genbank	58_37c	+1	provisional	splice_site	c.101+2	e1+2	1.000	-	-	-	no_errors
ENSG00000247325	0	genome.wustl.edu	37	5	178030990	178030990	+	RNA	SNP	A	A	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	5	178030990	178030990	A	C	SNP	CLK4	NM_020666.2	human	genbank	58_37c	-1	reviewed	intronic	c.1215-55	e11-55	0.001	-	-	-	no_errors
FAM134C	162427	genome.wustl.edu	37	17	40733786	40733786	+	RNA	SNP	A	A	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	17	40733786	40733786	A	G	SNP	FAM134C	NR_026697.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	no_errors
FUS	2521	genome.wustl.edu	37	16	31202420	31202420	+	Missense_Mutation	SNP	G	G	C	rs1132415	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	16	31202420	31202420	G	C	SNP	FUS	NM_004960.3	human	genbank	58_37c	+1	reviewed	missense	c.1530	p.K510N	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_RNA-binding domain RBD,superfamily_Znf265 first zinc-finger domain	-	no_errors
GDI1	2664	genome.wustl.edu	37	X	153670141	153670141	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	X	153670141	153670141	G	A	SNP	GDI1	NM_001493.2	human	genbank	58_37c	+1	reviewed	missense	c.991	p.D331N	1.000	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain	-	no_errors
GPR109B	8843	genome.wustl.edu	37	12	123201175	123201175	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	12	123201175	123201175	T	C	SNP	GPR109B	NM_006018.2	human	genbank	58_37c	-1	validated	missense	c.110	p.E37G	1.000	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HSP90AB1	3326	genome.wustl.edu	37	6	44217181	44217197	+	Frame_Shift_Del	DEL	AAATTGACATCATCCCC	AAATTGACATCATCCCC	-	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	AAATTGACATCATCCCC	AAATTGACATCATCCCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	6	44217181	44217197	AAATTGACATCATCCCC	-	DEL	HSP90AB1	NM_007355.2	human	genbank	58_37c	+1	provisional	frame_shift_del	c.215_231	p.I73fs	1.000:0.993:1.000:1.000:0.968:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997	HMMPfam_HATPase_c,HMMSmart_SM00387,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HMMPfam_HATPase_c,HMMSmart_SM00387,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,PatternScan_HSP90,superfamily_Ribosomal protein S5 domain 2-like,HMMPfam_HSP90,superfamily_HSP90 C-terminal domain (C-terminal part of Pfam 00183)	-	no_errors
LDB1	8861	genome.wustl.edu	37	10	103869779	103869779	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	10	103869779	103869779	A	G	SNP	LDB1	NM_001113407.1	human	genbank	58_37c	-1	validated	missense	c.547	p.Y183H	1.000	HMMPfam_LIM_bind	HMMPfam_LIM_bind	-	no_errors
LOC100289119	0	genome.wustl.edu	37	19	36293136	36293136	+	Missense_Mutation	SNP	G	G	A	rs150865499	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	19	36293136	36293136	G	A	SNP	LOC100289119	XM_002343676.1	human	genbank	58_37c	+1	model	missense	c.254	p.R85Q	0.961	NULL	NULL	-	no_errors
MALAT1	378938	genome.wustl.edu	37	11	65273405	65273407	+	RNA	DEL	CTG	CTG	-	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	11	65273405	65273407	CTG	-	DEL	MALAT1	NR_002819.2	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors
MYH3	4621	genome.wustl.edu	37	17	10552971	10552971	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	17	10552971	10552971	T	G	SNP	MYH3	NM_002470.2	human	genbank	58_37c	-1	reviewed	missense	c.565	p.T189P	1.000	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYL6	4637	genome.wustl.edu	37	12	56554049	56554049	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	12	56554049	56554049	A	C	SNP	MYL6	NM_021019.3	human	genbank	58_37c	+1	reviewed	missense	c.372	p.E124D	1.000	superfamily_EF-hand	HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
OR8K1	390157	genome.wustl.edu	37	11	56114030	56114030	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	11	56114030	56114030	G	A	SNP	OR8K1	NM_001002907.1	human	genbank	58_37c	+1	provisional	silent	c.516	p.L172	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
P2RX4	5025	genome.wustl.edu	37	12	121659957	121659957	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	12	121659957	121659957	A	C	SNP	P2RX4	NM_002560.2	human	genbank	58_37c	+1	reviewed	missense	c.415	p.T139P	0.630	HMMPfam_P2X_receptor	HMMPfam_P2X_receptor,PatternScan_P2X_RECEPTOR	-	no_errors
PADI1	29943	genome.wustl.edu	37	1	17567195	17567195	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	1	17567195	17567195	G	T	SNP	PADI1	NM_013358.2	human	genbank	58_37c	+1	reviewed	silent	c.1698	p.V566	0.980	HMMPfam_PAD,superfamily_Pentein	superfamily_Cupredoxins,HMMPfam_PAD,HMMPfam_PAD_N,HMMPfam_PAD_M,superfamily_Peptidylarginine deiminase Pad4 middle domain,superfamily_Pentein	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3R4	30849	genome.wustl.edu	37	3	130463555	130463566	+	In_Frame_Del	DEL	AACTGGCAAAAT	AACTGGCAAAAT	-	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	AACTGGCAAAAT	AACTGGCAAAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	3	130463555	130463566	AACTGGCAAAAT	-	DEL	PIK3R4	NM_014602.2	human	genbank	58_37c	-1	validated	in_frame_del	c.508_497	p.DFASF166in_frame_delV	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like	HMMPfam_HEAT,HMMPfam_Pkinase_Tyr,HMMSmart_WD40,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_WD40_like,superfamily_ARM-type_fold,PatternScan_PROTEIN_KINASE_ATP,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
PLEKHH1	57475	genome.wustl.edu	37	14	68042723	68042723	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	14	68042723	68042723	G	T	SNP	PLEKHH1	NM_020715.2	human	genbank	58_37c	+1	validated	splice_site	c.2352+1	e15+1	1.000	-	-	-	no_errors
PPP2CA	5515	genome.wustl.edu	37	5	133537565	133537565	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	5	133537565	133537565	G	A	SNP	PPP2CA	NM_002715.2	human	genbank	58_37c	-1	reviewed	missense	c.460	p.P154S	1.000	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases	HMMPfam_Metallophos,HMMSmart_SM00156,PatternScan_SER_THR_PHOSPHATASE,superfamily_Metallo-dependent phosphatases	-	no_errors
PRKAR1A	5573	genome.wustl.edu	37	17	66526534	66526534	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	17	66526534	66526534	G	T	SNP	PRKAR1A	NM_002734.3	human	genbank	58_37c	+1	reviewed	missense	c.1090	p.D364Y	1.000	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like	HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMPfam_RIIa,HMMSmart_SM00394,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cAMP-binding domain-like	-	no_errors
ROBO3	64221	genome.wustl.edu	37	11	124740064	124740064	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	11	124740064	124740064	G	A	SNP	ROBO3	NM_022370.3	human	genbank	58_37c	+1	reviewed	missense	c.770	p.R257H	1.000	superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
SKAP1	8631	genome.wustl.edu	37	17	46257608	46257608	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	17	46257608	46257608	G	A	SNP	SKAP1	NM_003726.3	human	genbank	58_37c	-1	reviewed	silent	c.634	p.L212	1.000	HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
SPATA17	128153	genome.wustl.edu	37	1	217975165	217975165	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	1	217975165	217975165	A	G	SNP	SPATA17	NM_138796.2	human	genbank	58_37c	+1	provisional	silent	c.978	p.E326	0.980	NULL	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TAF1L	138474	genome.wustl.edu	37	9	32633083	32633083	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	9	32633083	32633083	C	T	SNP	TAF1L	NM_153809.2	human	genbank	58_37c	-1	provisional	missense	c.2495	p.R832H	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
TRANK1	9881	genome.wustl.edu	37	3	36874921	36874921	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	3	36874921	36874921	G	C	SNP	TRANK1	NM_014831.2	human	genbank	58_37c	-1	provisional	missense	c.4371	p.F1457L	0.069	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TSSK3	81629	genome.wustl.edu	37	1	32828449	32828449	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	1	32828449	32828449	T	G	SNP	TSSK3	NM_052841.3	human	genbank	58_37c	+1	reviewed	splice_site	c.145+2	e1+2	1.000	-	-	-	no_errors
TUBGCP4	27229	genome.wustl.edu	37	15	43696712	43696712	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08O-01A-21W-A071-09	TCGA-A8-A08O-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	bc1398b9-d4ec-43e8-86bc-7025afaf93d5	ed048af2-2fc2-4c5c-9f8d-086a864a8b77	15	43696712	43696712	T	C	SNP	TUBGCP4	NM_014444.2	human	genbank	58_37c	+1	provisional	silent	c.1950	p.Y650	1.000	NULL	HMMPfam_Spc97_Spc98	-	no_errors
