Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	
ABCB11	8647	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	169869900	169869900	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ADAMTSL2	9719	broad.mit.edu;ucsc.edu	37	9	136412244	136412244	+	Missense_Mutation	SNP	T	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ADCY3	109	broad.mit.edu;ucsc.edu	37	2	25050900	25050900	+	Missense_Mutation	SNP	A	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ALPK3	57538	hgsc.bcm.edu;ucsc.edu	37	15	85407697	85407697	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ANGPT4	51378	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	896710	896710	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ARFGEF2	10564	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	47604916	47604916	+	Silent	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ASAP1	50807	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	131136342	131136342	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
BAZ2B	29994	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	160245882	160245882	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
C1orf114	57821	hgsc.bcm.edu;ucsc.edu	37	1	169394116	169394117	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
C22orf41	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	50994825	50994825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
C6orf118	168090	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	165715542	165715542	+	Missense_Mutation	SNP	C	C	T	rs143539145		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CALD1	800	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	134618404	134618404	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CAMTA2	23125	broad.mit.edu;ucsc.edu	37	17	4877038	4877038	+	Silent	SNP	T	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CDH8	1006	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	61854956	61854956	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CKAP2L	150468	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	113509843	113509843	+	Splice_Site	SNP	C	C	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CLCN1	1180	hgsc.bcm.edu;ucsc.edu	37	7	143048913	143048913	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CLTC	1213	broad.mit.edu;ucsc.edu	37	17	57746161	57746161	+	Missense_Mutation	SNP	A	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
COASY	80347	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	40715165	40715165	+	Silent	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
COL12A1	1303	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	75864169	75864169	+	Silent	SNP	G	G	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CSMD3	114788	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	113349913	113349913	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CTAGE9	643854	hgsc.bcm.edu	37	6	132032041	132032041	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
DPF2	5977	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	65113420	65113420	+	Silent	SNP	A	A	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
DYNC2H1	79659	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	103057148	103057148	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
EEF1D	1936	broad.mit.edu;hgsc.bcm.edu	37	8	144668953	144668953	+	Silent	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
EIF3C	8663	hgsc.bcm.edu	37	16	28403353	28403355	+	In_Frame_Del	DEL	TCC	TCC	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	TCC	TCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
EP300	2033	broad.mit.edu;ucsc.edu	37	22	41573737	41573737	+	Missense_Mutation	SNP	T	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
EPB41L3	23136	broad.mit.edu;hgsc.bcm.edu	37	18	5396318	5396318	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ESPL1	9700	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	53685805	53685805	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ESRP2	80004	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	68264909	68264909	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
FAM18A	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	10864178	10864178	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
FAM59A	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	29847906	29847906	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
FLG2	388698	hgsc.bcm.edu;ucsc.edu	37	1	152327665	152327670	+	In_Frame_Del	DEL	CCCGAA	CCCGAA	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	CCCGAA	CCCGAA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
FTSJD1	55783	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	71318090	71318090	+	Silent	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
GATAD2B	57459	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	153782691	153782691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
GPR83	10888	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	94113463	94113463	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
GREB1	9687	broad.mit.edu;hgsc.bcm.edu	37	2	11767208	11767208	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
GRIN3A	116443	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	104499650	104499650	+	Silent	SNP	G	G	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
GZF1	64412	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	23345603	23345603	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
HN1L	90861	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	1735538	1735538	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
IDI1	3422	hgsc.bcm.edu;ucsc.edu	37	10	1088643	1088643	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
IL2RB	3560	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	37539570	37539570	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
INSC	387755	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	15267524	15267524	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ITGB1	3688	broad.mit.edu;hgsc.bcm.edu	37	10	33199330	33199330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
KCNH7	90134	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	163241253	163241253	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
KRTAP9-2	83899	hgsc.bcm.edu	37	17	39383323	39383334	+	In_Frame_Del	DEL	CTGCTGCCAGCC	CTGCTGCCAGCC	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	CTGCTGCCAGCC	CTGCTGCCAGCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
LAMA5	3911	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	60895846	60895846	+	Silent	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
LENG9	94059	broad.mit.edu;ucsc.edu	37	19	54973869	54973869	+	Missense_Mutation	SNP	G	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
LMBR1L	55716	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	49495927	49495927	+	Silent	SNP	A	A	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
LOXHD1	125336	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	44137417	44137417	+	Silent	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MCM3AP	8888	broad.mit.edu;ucsc.edu	37	21	47685911	47685911	+	Missense_Mutation	SNP	T	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MGAT5	4249	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	135012082	135012082	+	Silent	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MIR548N	100302152	hgsc.bcm.edu;ucsc.edu	37	2	179344242	179344242	+	RNA	SNP	C	C	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MLL2	8085	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	49436557	49436557	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MLL2	8085	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	49436558	49436558	+	Silent	SNP	G	G	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MUC15	143662	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	26582750	26582750	+	Silent	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MUC16	94025	hgsc.bcm.edu	37	19	9048364	9048369	+	In_Frame_Del	DEL	AGTTGG	AGTTGG	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	AGTTGG	AGTTGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MUC17	140453	hgsc.bcm.edu;ucsc.edu	37	7	100678377	100678378	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MUC17	140453	hgsc.bcm.edu;ucsc.edu	37	7	100678380	100678380	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MYH1	4619	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	10404734	10404734	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MYO18A	399687	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	27438508	27438508	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MYO18A	399687	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	27438520	27438520	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
NAV2	89797	broad.mit.edu;ucsc.edu	37	11	20078104	20078104	+	Silent	SNP	C	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
NEK9	91754	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	75553771	75553771	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
NOTCH2	4853	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	120497758	120497758	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
NR2C1	7181	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	95422176	95422176	+	Silent	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
NR4A1	3164	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	52448382	52448382	+	Silent	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
NUDT12	83594	hgsc.bcm.edu;ucsc.edu	37	5	102894735	102894736	+	In_Frame_Ins	INS	-	-	CAG	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
OR4F6	390648	hgsc.bcm.edu;ucsc.edu	37	15	102346601	102346601	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PABPC1	26986	broad.mit.edu;hgsc.bcm.edu	37	8	101725345	101725345	+	Silent	SNP	T	T	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PABPC1	26986	broad.mit.edu;hgsc.bcm.edu	37	8	101725366	101725366	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PAPOLG	64895	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	61021866	61021866	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PARP10	84875	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	145059205	145059205	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PCDHB6	56130	hgsc.bcm.edu;ucsc.edu	37	5	140529900	140529900	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PDRG1	81572	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	30538174	30538174	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PIK3R4	30849	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	130452841	130452841	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PKN3	29941	broad.mit.edu;ucsc.edu	37	9	131480826	131480826	+	Splice_Site	SNP	A	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PRPF8	10594	broad.mit.edu;ucsc.edu	37	17	1564002	1564002	+	Missense_Mutation	SNP	T	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PRR14	78994	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	30667486	30667486	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PSMA6	5687	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	35777199	35777199	+	Splice_Site	SNP	G	G	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PTPRQ	374462	hgsc.bcm.edu	37	12	80943506	80943523	+	In_Frame_Del	DEL	TGAAACAGGTAACTAACG	TGAAACAGGTAACTAACG	-	rs141686707	by1000genomes	TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	TGAAACAGGTAACTAACG	TGAAACAGGTAACTAACG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
QPRT	23475	broad.mit.edu;ucsc.edu	37	16	29706503	29706503	+	Missense_Mutation	SNP	G	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
RAC3	5881	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	79990881	79990881	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
REV1	51455	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	100055089	100055089	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
RNF25	64320	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	219532706	219532706	+	Splice_Site	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SCTR	6344	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	120204412	120204412	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SEMA6D	80031	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	48063502	48063502	+	Silent	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SEPHS2	22928	broad.mit.edu;ucsc.edu	37	16	30456187	30456187	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SERPINB8	5271	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	61654390	61654390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SETD2	29072	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	47127749	47127749	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SLC27A1	376497	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	17611618	17611618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SLC2A14	144195	broad.mit.edu;hgsc.bcm.edu	37	12	7967042	7967042	+	Missense_Mutation	SNP	C	C	T	rs140568143	byfrequency	TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SLC35B2	347734	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	44224429	44224429	+	Silent	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SLC44A1	23446	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	108147762	108147762	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
SLC5A10	125206	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	18863863	18863863	+	Silent	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TAF15	8148	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	34147197	34147197	+	Silent	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TBC1D1	23216	broad.mit.edu;ucsc.edu	37	4	38023333	38023333	+	Missense_Mutation	SNP	A	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TECRL	253017	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	4	65147225	65147225	+	Silent	SNP	A	A	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TG	7038	broad.mit.edu;ucsc.edu	37	8	134030154	134030154	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TJP2	9414	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	71855060	71855060	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TM7SF4	0	broad.mit.edu;ucsc.edu	37	8	105361373	105361373	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TREML1	340205	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	41117371	41117371	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TTN	7273	hgsc.bcm.edu;ucsc.edu	37	2	179516214	179516219	+	In_Frame_Del	DEL	CACCAG	CACCAG	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	CACCAG	CACCAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
UGT1A7	54577	broad.mit.edu;hgsc.bcm.edu	37	2	234591121	234591121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
USH2A	7399	hgsc.bcm.edu;ucsc.edu	37	1	216595674	216595674	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
USP37	57695	broad.mit.edu;ucsc.edu	37	2	219353073	219353073	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
VPS13C	54832	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	62254726	62254726	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
WDFY4	57705	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	50034823	50034823	+	Silent	SNP	C	C	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF232	7775	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	5009701	5009701	+	Silent	SNP	A	A	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF345	25850	hgsc.bcm.edu	37	19	37368165	37368166	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF345	25850	hgsc.bcm.edu	37	19	37368169	37368169	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF496	84838	broad.mit.edu;ucsc.edu	37	1	247463877	247463877	+	Missense_Mutation	SNP	G	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF621	285268	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	40574189	40574189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF799	90576	broad.mit.edu;hgsc.bcm.edu	37	19	12501322	12501322	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ALMS1	7840	broad.mit.edu	37	2	73680749	73680749	+	Silent	SNP	A	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ARIH1	25820	broad.mit.edu	37	15	72873082	72873082	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
COL4A6	1288	broad.mit.edu	37	X	107400258	107400258	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
CROCCL1	0	broad.mit.edu	37	1	16946437	16946437	+	RNA	SNP	C	T	T	rs2262202	by2hit2allele;alternate_allele	TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
DCAF8L2	347442	broad.mit.edu	37	X	27765420	27765421	+	In_Frame_Ins	INS	-	ATACAA	ATACAA	rs34350719	alternate_allele	TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
DGKZ	8525	broad.mit.edu	37	11	46388175	46388175	+	Silent	SNP	G	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
IPO13	9670	broad.mit.edu	37	1	44433044	44433044	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
IRX6	79190	broad.mit.edu	37	16	55362619	55362619	+	Silent	SNP	T	C	C	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
MOBKL2C	0	broad.mit.edu	37	1	47075867	47075867	+	Missense_Mutation	SNP	A	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PDE4C	5143	broad.mit.edu	37	19	18322678	18322678	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
PLXNB1	5364	broad.mit.edu	37	3	48461366	48461366	+	Missense_Mutation	SNP	C	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
RAET1E	135250	broad.mit.edu	37	6	150211277	150211277	+	Silent	SNP	A	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
TMUB2	79089	broad.mit.edu	37	17	42266658	42266658	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
Unknown	0	broad.mit.edu	37	15	29084045	29084045	+	RNA	SNP	T	G	G	rs75345913	bycluster	TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
Unknown	0	broad.mit.edu	37	9	68413565	68413565	+	RNA	SNP	G	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
Unknown	0	broad.mit.edu	37	9	68413569	68413569	+	RNA	SNP	C	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
VMO1	284013	broad.mit.edu	37	17	4689557	4689557	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
WDR52	55779	broad.mit.edu	37	3	113128137	113128137	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF256	10172	broad.mit.edu	37	19	58453894	58453894	+	Silent	SNP	T	A	A	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
ZNF256	10172	broad.mit.edu	37	19	58453896	58453896	+	Missense_Mutation	SNP	T	G	G	novel		TCGA-B0-4811-01A-01D-1501-10	TCGA-B0-4811-11A-02D-1501-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a46182dc-2481-4911-9f6b-9532666f9f8c	96a5756f-57e4-4f88-9a51-b92d406a578a	
