Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
NADK	65220	genome.wustl.edu	37	1	1685773	1685773	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_023018.3	-1	validated	p.N298I	1.000	31	0%	32	46.9%	-	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_NAD_kinase,superfamily_NAD kinase (Pfam 01513)
ARHGEF19	128272	genome.wustl.edu	37	1	16535180	16535181	+	Frame_Shift_Ins	INS	-	-	CTGTGTGTGT	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_153213.3	-1	provisional	p.P123fs	1.000:0.999	-	-	-	-	-	-	-	-	-	NULL
ARID1A	8289	genome.wustl.edu	37	1	27057741	27057742	+	Frame_Shift_Ins	INS	-	-	CC	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_006015.4	+1	reviewed	p.Y484fs	0.464:0.694	-	-	-	-	-	-	-	-	-	NULL
GCLM	2730	genome.wustl.edu	37	1	94354601	94354601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_002061.2	-1	reviewed	p.R257K	1.000	224	0%	245	37.1%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRIG2	9860	genome.wustl.edu	37	1	113661869	113661869	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_014813.1	+1	provisional	p.R899W	0.998	67	0%	54	40.7%	-	-	probably_damaging(0.994)	tolerated(0.06)	deleterious(0.774)	NULL
POLR3GL	84265	genome.wustl.edu	37	1	145460194	145460194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_032305.1	-1	provisional	p.R10H	0.997	27	0%	33	45.5%	-	-	possibly_damaging(0.499)	deleterious(0.03)	deleterious(0.531)	NULL
CD5L	922	genome.wustl.edu	37	1	157804385	157804385	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_005894.2	-1	validated	p.R177Q	0.998	63	0%	94	43.6%	-	-	possibly_damaging(0.834)	tolerated(0.1)	deleterious(0.605)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
LYST	1130	genome.wustl.edu	37	1	235963685	235963685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_000081.2	-1	reviewed	p.G1314V	1.000	121	0%	71	39.4%	-	-	possibly_damaging(0.876)	tolerated(0.07)	deleterious(0.660)	NULL
ADRA2B	151	genome.wustl.edu	37	2	96780986	96780987	+	In_Frame_Ins	INS	-	-	TCCTCCTCT	rs4426564	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000409345	-1	known	p.305in_frame_insEEE	0.205:0.289	-	-	-	-	-	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
KANSL3	55683	genome.wustl.edu	37	2	97302679	97302679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001115016.1	-1	validated	p.R65L	1.000	31	0%	54	40.7%	-	-	possibly_damaging(0.456)	tolerated(0.13)	neutral(0.402)	NULL
BUB1	699	genome.wustl.edu	37	2	111398898	111398898	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_004336.3	-1	reviewed	p.F923L	1.000	143	0%	126	42.9%	-	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like)
SCN9A	6335	genome.wustl.edu	37	2	167133582	167133588	+	Frame_Shift_Del	DEL	TCCACTC	TCCACTC	-	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	TCCACTC	TCCACTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_002977.3	-1	reviewed	p.E916fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
ARMC9	80210	genome.wustl.edu	37	2	232225535	232225536	+	Frame_Shift_Ins	INS	-	-	G	rs35889244	byCluster;by1000genomes	TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000359743	+1	known	p.P735fs	0.000:0.000	-	-	-	-	-	-	-	-	-	NULL
ADAMTS9	56999	genome.wustl.edu	37	3	64666930	64666930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_182920.1	-1	reviewed	p.R209H	0.003	417	0.2%	479	40.9%	-	-	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
SI	6476	genome.wustl.edu	37	3	164786523	164786523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001041.3	-1	reviewed	p.R157H	1.000	241	0.8%	214	36%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRRIQ4	344657	genome.wustl.edu	37	3	169540297	169540297	+	Silent	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001080460.1	+1	provisional	p.D196	0.387	24	0%	31	29%	-	-	-	-	-	HMMPfam_LRR_1,superfamily_SSF52058
LYAR	55646	genome.wustl.edu	37	4	4276125	4276125	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001145725.1	-1	validated	p.G267	0.000	185	0%	260	40.8%	-	-	-	-	-	NULL
FAM184B	27146	genome.wustl.edu	37	4	17640922	17640922	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_015688.1	-1	validated	p.S873G	1.000	27	0%	31	38.7%	-	-	possibly_damaging(0.94)	deleterious(0.03)	deleterious(0.750)	NULL
PIK3R1	5295	genome.wustl.edu	37	5	67591135	67591149	+	In_Frame_Del	DEL	GAGAGACCAATACTT	GAGAGACCAATACTT	-	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	GAGAGACCAATACTT	GAGAGACCAATACTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_181523.1	+1	reviewed	p.RDQYL577in_frame_del	0.016:0.975:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.989:1.000:1.000:1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
RHOBTB3	22836	genome.wustl.edu	37	5	95115960	95115960	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000510313	+1	known	p.R11Q	0.001	93	0%	108	43.5%	-	-	-	-	-	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
PCDHA2	56146	genome.wustl.edu	37	5	140174749	140174749	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_018905.2	+1	reviewed	p.A67V	0.537	48	0%	45	46.7%	-	-	benign(0.001)	tolerated(1)	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
ANKS1A	23294	genome.wustl.edu	37	6	35053569	35053569	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_015245.2	+1	validated	p.T1053	0.399	43	0%	53	32.1%	-	-	-	-	-	HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729
TTK	7272	genome.wustl.edu	37	6	80732173	80732173	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_003318.4	+1	reviewed	p.R414Q	0.003	94	0%	85	42.4%	-	-	benign(0.006)	tolerated(0.35)	neutral(0.021)	NULL
ASCC3	10973	genome.wustl.edu	37	6	101248252	101248252	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_006828.2	-1	validated	p.E351Q	1.000	579	0.2%	525	38.3%	-	-	possibly_damaging(0.492)	tolerated(0.58)	neutral(0.169)	NULL
MGAM	8972	genome.wustl.edu	37	7	141747587	141747587	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_004668.2	+1	reviewed	p.R834Q	0.997	145	0%	160	34.4%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
KEL	3792	genome.wustl.edu	37	7	142651032	142651032	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_000420.2	-1	reviewed	p.P312	0.986	57	0%	92	38%	-	-	-	-	-	"HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain"
PCM1	5108	genome.wustl.edu	37	8	17838200	17838200	+	Silent	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_006197.3	+1	validated	p.S1348	1.000	123	0%	76	35.5%	-	-	-	-	-	NULL
SULF1	23213	genome.wustl.edu	37	8	70498601	70498601	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001128204.1	+1	validated	p.G141V	1.000	144	0%	95	33.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
SNTB1	6641	genome.wustl.edu	37	8	121644790	121644790	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_021021.3	-1	reviewed	p.V297G	0.998	94	0%	155	40%	-	-	possibly_damaging(0.49)	deleterious(0)	deleterious(0.608)	HMMSmart_SM00233
CYP11B1	1584	genome.wustl.edu	37	8	143958607	143958607	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_000497.3	-1	reviewed	p.R143W	0.046	27	0%	56	46.4%	-	-	benign(0.002)	tolerated(0.2)	neutral(0.049)	HMMPfam_p450,superfamily_Cytochrome_P450
FAM189A2	9413	genome.wustl.edu	37	9	72002911	72002912	+	In_Frame_Ins	INS	-	-	GTTATA	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000377216	+1	known	p.20in_frame_insYS	0.000:0.000	-	-	-	-	-	-	-	-	-	NULL
ZNF367	195828	genome.wustl.edu	37	9	99160557	99160557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_153695.3	-1	validated	p.R154C	1.000	186	0.5%	169	35.5%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PRRC2B	84726	genome.wustl.edu	37	9	134340460	134340460	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_013318.3	+1	validated	p.H572R	0.007	12	0%	26	50%	-	-	benign(0)	tolerated(1)	-	NULL
FAM188A	80013	genome.wustl.edu	37	10	15828607	15828607	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_024948.2	-1	validated	p.G357R	1.000	129	0%	86	34.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_EF-hand
WDFY4	57705	genome.wustl.edu	37	10	49939578	49939578	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_020945.1	+1	validated	p.R518Q	1.000	19	0%	33	30.3%	-	-	probably_damaging(1)	tolerated(0.25)	deleterious(0.537)	superfamily_ARM repeat
ANXA7	310	genome.wustl.edu	37	10	75139703	75139703	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_004034.2	-1	reviewed	p.R389*	1.000	144	0.7%	157	28%	-	-	-	-	-	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_SM00335
NRAP	4892	genome.wustl.edu	37	10	115383389	115383389	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_198060.2	-1	validated	p.Y786H	1.000	198	0.5%	184	34.8%	-	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_Nebulin,HMMSmart_SM00227
PNPLA2	57104	genome.wustl.edu	37	11	824410	824410	+	Silent	SNP	G	G	A	rs150770244	byCluster;by1000genomes	TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_020376.2	+1	provisional	p.R383	1.000	1	0.000	8	1.000	-	-	-	-	-	NULL
DCHS1	8642	genome.wustl.edu	37	11	6662745	6662746	+	In_Frame_Ins	INS	-	-	CAG	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_003737.2	-1	reviewed	p.33in_frame_insL	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
GYLTL1B	120071	genome.wustl.edu	37	11	45946345	45946345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_152312.3	+1	validated	p.A225V	0.998	41	0%	76	38.2%	-	-	benign(0.001)	tolerated(1)	-	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases
ENSG00000230416	0	genome.wustl.edu	37	11	56216372	56216372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000415874	+1	known	p.P77T	1.000	106	0%	71	21.1%	-	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZFP91	80829	genome.wustl.edu	37	11	58377419	58377419	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_053023.3	+1	reviewed	p.R163C	1.000	96	0%	120	33.3%	-	-	benign(0.021)	deleterious(0.01)	neutral(0.407)	NULL
CCND1	595	genome.wustl.edu	37	11	69466040	69466040	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_053056.2	+1	reviewed	p.V293G	1.000	10	0%	13	38.5%	-	-	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
TECTA	7007	genome.wustl.edu	37	11	121016477	121016477	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_005422.2	+1	reviewed	p.E1253Q	1.000	95	0%	113	42.5%	-	-	benign(0.001)	tolerated(0.66)	neutral(0.003)	HMMPfam_VWD,HMMSmart_SM00216
C12orf60	144608	genome.wustl.edu	37	12	14976512	14976512	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_175874.3	+1	validated	p.V215F	0.308	40	0%	39	35.9%	-	-	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
SARNP	84324	genome.wustl.edu	37	12	56188666	56188666	+	Splice_Site	SNP	T	T	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_033082.3	-1	reviewed	e6-2	0.998	64	0%	91	40.7%	-	-	-	-	-	-
CMKLR1	1240	genome.wustl.edu	37	12	108685821	108685821	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001142343.1	-1	validated	p.A307S	0.439	85	0%	115	12.2%	-	-	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
NALCN	259232	genome.wustl.edu	37	13	101712255	101712255	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_052867.2	-1	validated	p.R1607Q	0.998	112	0%	126	48.4%	-	-	benign(0.279)	tolerated(0.22)	neutral(0.072)	NULL
LOC643677	643677	genome.wustl.edu	37	13	103383899	103383899	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	XM_002344085.1	-1	model	p.P6231L	0.017	138	0%	127	35.4%	-	-	unknown(0)	-	-	NULL
IGHD3-10	28499	genome.wustl.edu	37	14	106370373	106370373	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000390583	-1	known	p.F5L	0.001	152	0.7%	231	34.6%	-	-	unknown(0)	-	-	NULL
ATP10A	57194	genome.wustl.edu	37	15	26026347	26026347	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_024490.3	-1	reviewed	p.R158Q	1.000	139	0%	151	39.1%	-	-	benign(0.137)	tolerated(0.59)	neutral(0.016)	HMMPfam_E1-E2_ATPase,superfamily_SSF81653
CILP	8483	genome.wustl.edu	37	15	65490022	65490022	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_003613.3	-1	reviewed	p.R868W	0.006	82	0%	130	29.2%	-	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
ISLR	3671	genome.wustl.edu	37	15	74467244	74467244	+	Silent	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_005545.3	+1	validated	p.L15	0.000	13	0%	20	40%	-	-	-	-	-	NULL
MFGE8	4240	genome.wustl.edu	37	15	89450600	89450600	+	Silent	SNP	G	G	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_005928.2	-1	validated	p.V71	0.000	36	0%	52	30.8%	-	-	-	-	-	HMMSmart_SM00231,superfamily_Galactose-binding domain-like
SRRM2	23524	genome.wustl.edu	37	16	2808547	2808547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_016333.3	+1	validated	p.R198C	1.000	142	0%	159	39.6%	-	-	unknown(0)	-	-	NULL
DNAH3	55567	genome.wustl.edu	37	16	20994087	20994087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_017539.1	-1	provisional	p.N2605K	1.000	81	0%	84	28.6%	-	-	benign(0.021)	tolerated(0.53)	neutral(0.009)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ITGAL	3683	genome.wustl.edu	37	16	30495497	30495497	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_002209.2	+1	reviewed	p.A307T	0.000	93	0%	102	43.1%	-	-	benign(0.002)	tolerated(0.26)	neutral(0.034)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like,superfamily_Integrin alpha N-terminal domain
IRX3	79191	genome.wustl.edu	37	16	54319128	54319128	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_024336.2	-1	validated	p.G222D	0.569	64	1.6%	113	40.7%	-	-	benign(0.153)	tolerated(1)	neutral(0.013)	NULL
CTCF	10664	genome.wustl.edu	37	16	67650722	67650722	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_006565.2	+1	reviewed	p.Y343H	1.000	134	0.7%	202	34.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SPIRE2	84501	genome.wustl.edu	37	16	89911763	89911763	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_032451.1	+1	validated	p.S93L	0.879	170	0%	175	38.9%	-	-	benign(0.002)	deleterious(0.02)	neutral(0.383)	HMMSmart_SM00750
COASY	80347	genome.wustl.edu	37	17	40717981	40717981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001042532.2	+1	validated	p.D593N	0.000	19	0%	32	43.8%	-	-	benign(0.001)	tolerated(0.14)	neutral(0.249)	NULL
SEPT4	5414	genome.wustl.edu	37	17	56599153	56599153	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_004574.2	-1	reviewed	p.I287V	1.000	101	0%	148	29.1%	-	-	benign(0)	tolerated(1)	-	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases
HCN2	610	genome.wustl.edu	37	19	615947	615955	+	In_Frame_Del	DEL	CCGCCGCCG	CCGCCGCCG	-	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	CCGCCGCCG	CCGCCGCCG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001194.3	+1	validated	p.PPP718in_frame_del	0.991:0.983:0.975:0.967:0.966:0.968:0.999:0.999:0.546	-	-	-	-	-	-	-	-	-	NULL
DAPK3	1613	genome.wustl.edu	37	19	3964960	3964960	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001348.1	-1	reviewed	p.R31Q	1.000	22	0%	47	38.3%	-	-	benign(0.024)	tolerated(0.4)	neutral(0.017)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
TICAM1	148022	genome.wustl.edu	37	19	4817288	4817289	+	In_Frame_Ins	INS	-	-	AGG	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_182919.2	-1	validated	p.367in_frame_insP	0.000:0.000	-	-	-	-	-	-	-	-	-	NULL
ZNF724P	440519	genome.wustl.edu	37	19	23406636	23406636	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000418100	-1	known	p.L137F	0.000	127	0%	74	29.7%	-	-	benign(0.029)	tolerated(0.13)	neutral(0.254)	NULL
SLC24A3	57419	genome.wustl.edu	37	20	19261705	19261705	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_020689.3	+1	validated	p.R82Q	0.000	119	0.8%	145	38.6%	-	-	benign(0.005)	tolerated(0.85)	neutral(0.001)	NULL
ZNRF3	84133	genome.wustl.edu	37	22	29444383	29444383	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_032173.2	+1	validated	p.R207W	0.999	64	0%	91	79.1%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box
ENSG00000211459	0	genome.wustl.edu	37	MT	1000	1000	+	RNA	SNP	T	T	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000389680	+1	known	NULL	NULL	36	0%	23	87%	-	-	-	-	-	-
ENSG00000210082	0	genome.wustl.edu	37	MT	2997	2997	+	RNA	SNP	A	A	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	ENST00000387347	+1	known	NULL	NULL	4	0.000	6	1.000	-	-	-	-	-	-
GUCY2F	2986	genome.wustl.edu	37	X	108691388	108691388	+	Silent	SNP	A	A	G	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001522.2	-1	reviewed	p.R493	0.721	299	0%	277	37.2%	-	-	-	-	-	NULL
RBMXL3	139804	genome.wustl.edu	37	X	114424064	114424064	+	Silent	SNP	C	C	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001145346.1	+1	validated	p.D20	0.890	58	0%	64	39.1%	-	-	-	-	-	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
OR13H1	347468	genome.wustl.edu	37	X	130678908	130678908	+	Silent	SNP	G	G	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001004486.1	+1	provisional	p.L287	0.059	136	0%	120	25%	-	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
MAGEA11	4110	genome.wustl.edu	37	X	148794854	148794854	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_005366.4	+1	reviewed	p.C12F	0.005	115	0%	138	34.8%	-	-	possibly_damaging(0.952)	-	-	NULL
NSDHL	50814	genome.wustl.edu	37	X	152027348	152027348	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BS-A0U5-01A-11D-A10G-09	TCGA-BS-A0U5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	45fb474e-7c99-4678-8d96-ab60f1d02d87	a0138bfb-7eba-4650-8d06-29bb8ecc1357	NM_001129765.1	+1	reviewed	p.V101A	1.000	194	0%	235	36.2%	-	-	possibly_damaging(0.863)	deleterious(0.04)	deleterious(0.682)	HMMPfam_3Beta_HSD,superfamily_NAD(P)-bd
