Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACTG1	0	genome.wustl.edu	37	17	79478289	79478289	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	17	79478289	79478289	G	C	SNP	ACTG1	NM_001614.2	human	genbank	58_37c	-1	reviewed	missense	c.727	p.P243A	1.000	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Actin,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE,PatternScan_ACTINS_1,PatternScan_ACTINS_2,superfamily_Actin-like ATPase domain	-	no_errors
CELF1	0	genome.wustl.edu	37	11	47498507	47498507	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	11	47498507	47498507	C	A	SNP	CELF1	NM_001025596.2	human	genbank	58_37c	-1	reviewed	silent	c.894	p.G298	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
COG3	0	genome.wustl.edu	37	13	46054421	46054421	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	13	46054421	46054421	A	G	SNP	COG3	NM_031431.2	human	genbank	58_37c	+1	reviewed	missense	c.545	p.E182G	1.000	HMMPfam_Sec34	HMMPfam_Sec34	-	no_errors
COL6A5	0	genome.wustl.edu	37	3	130145079	130145079	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	3	130145079	130145079	C	A	SNP	COL6A5	NM_153264.5	human	genbank	58_37c	+1	validated	missense	c.5185	p.Q1729K	0.000	NULL	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Collagen,superfamily_SSF53300	-	no_errors
CXorf40B	0	genome.wustl.edu	37	X	149101992	149101992	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	X	149101992	149101992	T	C	SNP	CXorf40B	NM_001013845.1	human	genbank	58_37c	-1	validated	missense	c.101	p.Q34R	0.005	NULL	NULL	-	no_errors
DNAH3	0	genome.wustl.edu	37	16	20994169	20994169	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	16	20994169	20994169	C	T	SNP	DNAH3	NM_017539.1	human	genbank	58_37c	-1	provisional	missense	c.7733	p.R2578Q	0.964	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_Dynein_heavy,superfamily_Prefoldin,HMMPfam_AAA_5,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DSP	0	genome.wustl.edu	37	6	7580379	7580379	+	Missense_Mutation	SNP	C	C	T	rs138599871	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	6	7580379	7580379	C	T	SNP	DSP	NM_004415.2	human	genbank	58_37c	+1	reviewed	missense	c.3956	p.T1319I	0.997	NULL	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Prefoldin,superfamily_tRNA-binding arm,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat	-	no_errors
EFCAB9	0	genome.wustl.edu	37	5	171621224	171621224	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	5	171621224	171621224	A	C	SNP	EFCAB9	ENST00000398186	human	ensembl	58_37c	+1	known	missense	c.48	p.K16N	0.012	NULL	superfamily_SSF47473	-	no_errors
EFHA2	0	genome.wustl.edu	37	8	16921636	16921636	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	8	16921636	16921636	C	-	DEL	EFHA2	NM_181723.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.425	p.T143fs	0.997	NULL	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
FAM22B	0	genome.wustl.edu	37	10	81466181	81466181	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	10	81466181	81466181	C	T	SNP	FAM22B	ENST00000429828	human	ensembl	58_37c	+1	known	missense	c.766	p.P256S	0.000	NULL	NULL	-	no_errors
FTSJD2	0	genome.wustl.edu	37	6	37429325	37429325	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	6	37429325	37429325	G	T	SNP	FTSJD2	NM_015050.2	human	genbank	58_37c	+1	validated	missense	c.1096	p.G366C	1.000	HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_G-patch,HMMSmart_SM00443,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
ITIH4	0	genome.wustl.edu	37	3	52863161	52863161	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	3	52863161	52863161	C	T	SNP	ITIH4	NM_002218.4	human	genbank	58_37c	-1	reviewed	silent	c.225	p.K75	1.000	HMMSmart_SM00609,HMMPfam_VIT	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00609,HMMPfam_ITI_HC_C,HMMPfam_VIT,superfamily_vWA-like	-	no_errors
KIAA2022	0	genome.wustl.edu	37	X	73961112	73961112	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	X	73961112	73961112	T	C	SNP	KIAA2022	NM_001008537.2	human	genbank	58_37c	-1	validated	missense	c.3280	p.T1094A	0.258	NULL	NULL	-	no_errors
LOC653781	0	genome.wustl.edu	37	2	131379061	131379061	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	2	131379061	131379061	T	A	SNP	LOC653781	XM_929706.3	human	genbank	58_37c	+1	model	missense	c.829	p.C277S	0.207	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Actin,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE,PatternScan_ACTINS_2,superfamily_Actin-like ATPase domain	-	no_errors
LOC727858	0	genome.wustl.edu	37	15	85747556	85747556	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	15	85747556	85747556	C	T	SNP	LOC727858	XM_001126151.2	human	genbank	58_37c	+1	model	silent	c.114	p.I38	1.000	HMMPfam_GED	HMMPfam_GED	-	no_errors
LOC729057	0	genome.wustl.edu	37	22	16123793	16123793	+	RNA	SNP	G	G	A	rs11703326	byHapMap	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	22	16123793	16123793	G	A	SNP	LOC729057	XR_042044.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.007	-	-	-	no_errors
LRRTM3	0	genome.wustl.edu	37	10	68687255	68687255	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	10	68687255	68687255	G	A	SNP	LRRTM3	NM_178011.3	human	genbank	58_37c	+1	validated	missense	c.581	p.R194Q	1.000	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
MAMLD1	0	genome.wustl.edu	37	X	149638546	149638546	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	X	149638546	149638546	C	T	SNP	MAMLD1	NM_005491.3	human	genbank	58_37c	+1	reviewed	missense	c.701	p.A234V	0.000	NULL	NULL	-	no_errors
METTL5	0	genome.wustl.edu	37	2	170672017	170672017	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	2	170672017	170672017	C	T	SNP	METTL5	NM_014168.2	human	genbank	58_37c	-1	provisional	missense	c.511	p.E171K	1.000	superfamily_SSF53335	PatternScan_N6_MTASE,HMMPfam_MTS,superfamily_SSF53335	-	no_errors
MIR620	0	genome.wustl.edu	37	12	116586415	116586416	+	RNA	DEL	TA	TA	-	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	TA	TA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	12	116586415	116586416	TA	-	DEL	MIR620	ENST00000385232	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
NPTXR	0	genome.wustl.edu	37	22	39218663	39218663	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	22	39218663	39218663	C	T	SNP	NPTXR	NM_014293.2	human	genbank	58_37c	-1	reviewed	missense	c.1454	p.G485D	1.000	HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	byCluster	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	3	178936091	178936091	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1633	p.E545K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PINX1	0	genome.wustl.edu	37	8	10623423	10623423	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	8	10623423	10623423	C	T	SNP	PINX1	NM_017884.4	human	genbank	58_37c	-1	provisional	missense	c.475	p.D159N	0.000	NULL	HMMPfam_G-patch,HMMSmart_SM00443	-	no_errors
PITPNM1	0	genome.wustl.edu	37	11	67264729	67264729	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	11	67264729	67264729	G	A	SNP	PITPNM1	NM_004910.2	human	genbank	58_37c	-1	validated	missense	c.2119	p.R707C	1.000	HMMPfam_DDHD	HMMPfam_IP_trans,HMMPfam_DDHD,HMMPfam_LNS2,HMMSmart_SM00775,superfamily_Bet v1-like,superfamily_HAD-like	-	no_errors
PPFIA3	0	genome.wustl.edu	37	19	49643310	49643310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	19	49643310	49643310	G	A	SNP	PPFIA3	NM_003660.2	human	genbank	58_37c	+1	reviewed	missense	c.2333	p.R778Q	0.962	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2	-	no_errors
RBBP8	0	genome.wustl.edu	37	18	20573334	20573361	+	Frame_Shift_Del	DEL	AATTTAGGCAAGTGACTCTTTATGAGGC	AATTTAGGCAAGTGACTCTTTATGAGGC	-	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	AATTTAGGCAAGTGACTCTTTATGAGGC	AATTTAGGCAAGTGACTCTTTATGAGGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	18	20573334	20573361	AATTTAGGCAAGTGACTCTTTATGAGGC	-	DEL	RBBP8	NM_002894.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1544_1571	p.K515fs	0.002:0.007:0.016:0.079:0.076:0.822:0.943:0.957:0.999:0.998:0.916:0.917:0.969:0.998:1.000:1.000:1.000:1.000:0.997:0.836:0.973:0.989:0.998:1.000:1.000:0.985:0.984:0.984	NULL	HMMPfam_SAE2,HMMPfam_CtIP_N	-	no_errors
SCRN3	0	genome.wustl.edu	37	2	175264705	175264705	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	2	175264705	175264705	G	A	SNP	SCRN3	NM_024583.3	human	genbank	58_37c	+1	validated	missense	c.215	p.R72H	1.000	NULL	NULL	-	no_errors
SFXN4	0	genome.wustl.edu	37	10	120917220	120917220	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	10	120917220	120917220	A	C	SNP	SFXN4	NM_213649.1	human	genbank	58_37c	-1	validated	nonsense	c.497	p.L166*	0.006	HMMPfam_Mtc	HMMPfam_Mtc	-	no_errors
SLC12A5	0	genome.wustl.edu	37	20	44680375	44680375	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	20	44680375	44680375	C	T	SNP	SLC12A5	NM_001134771.1	human	genbank	58_37c	+1	reviewed	missense	c.2312	p.S771F	1.000	NULL	HMMPfam_AA_permease	-	no_errors
SLC5A6	0	genome.wustl.edu	37	2	27430388	27430388	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	2	27430388	27430388	A	C	SNP	SLC5A6	NM_021095.2	human	genbank	58_37c	-1	validated	missense	c.131	p.L44R	1.000	NULL	HMMPfam_SSF,PatternScan_NA_SOLUT_SYMP_1,PatternScan_NA_SOLUT_SYMP_2	-	no_errors
SOX30	0	genome.wustl.edu	37	5	157073789	157073789	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	5	157073789	157073789	G	A	SNP	SOX30	NM_178424.1	human	genbank	58_37c	-1	reviewed	nonsense	c.1243	p.R415*	1.000	NULL	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box	-	no_errors
TNN	0	genome.wustl.edu	37	1	175067535	175067535	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	1	175067535	175067535	C	T	SNP	TNN	NM_022093.1	human	genbank	58_37c	+1	validated	silent	c.1923	p.D641	0.257	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00181,superfamily_Fibronectin type III,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin	-	no_errors
UGT1A4	0	genome.wustl.edu	37	2	234680926	234680926	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	2	234680926	234680926	G	A	SNP	UGT1A4	NM_007120.2	human	genbank	58_37c	+1	reviewed	missense	c.1326	p.M442I	1.000	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
USP15	0	genome.wustl.edu	37	12	62786084	62786084	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	12	62786084	62786084	A	G	SNP	USP15	NM_006313.1	human	genbank	58_37c	+1	provisional	silent	c.2250	p.K750	1.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,HMMSmart_DUSP,HMMPfam_DUF1055,superfamily_RNA3apos_cycl/enolpyr_transf_A/B,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
ZNF181	0	genome.wustl.edu	37	19	35232612	35232612	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	19	35232612	35232612	C	T	SNP	ZNF181	NM_001029997.3	human	genbank	58_37c	+1	validated	silent	c.1326	p.F442	0.170	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00614,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF587	0	genome.wustl.edu	37	19	58370865	58370865	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	19	58370865	58370865	G	A	SNP	ZNF587	ENST00000339656	human	ensembl	58_37c	+1	known	missense	c.1085	p.R362H	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNFX1	0	genome.wustl.edu	37	20	47863858	47863858	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A146-01A-31D-A10Y-09	TCGA-D8-A146-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9a7548dc-fc79-4ad4-a324-0e9f63c91a20	6d63e128-669b-4ac6-b2d3-10f6d7cf82d1	20	47863858	47863858	C	T	SNP	ZNFX1	NM_021035.2	human	genbank	58_37c	-1	validated	nonsense	c.5703	p.W1901*	1.000	NULL	HMMPfam_zf-NF-X1,HMMSmart_SM00438,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
