Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADAD1	0	genome.wustl.edu	37	4	123332537	123332538	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	4	123332537	123332538	AA	-	DEL	ADAD1	NM_139243.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.1009_1010	p.K337fs	1.000:1.000	HMMPfam_A_deamin,HMMSmart_SM00552	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_dsrm,HMMSmart_SM00358,HMMPfam_A_deamin,HMMSmart_SM00552,superfamily_dsRNA-binding domain-like	-	no_errors
ADAM11	0	genome.wustl.edu	37	17	42850750	42850750	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	42850750	42850750	G	A	SNP	ADAM11	NM_002390.4	human	genbank	58_37c	+1	reviewed	missense	c.947	p.R316Q	1.000	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_CR,HMMSmart_SM00608,PatternScan_EGF_1,HMMPfam_EGF_2,PatternScan_DISINTEGRIN_1,superfamily_Metalloproteases (""zincins"") catalytic domain,superfamily_EGF/Laminin"	-	no_errors
ANKRD12	0	genome.wustl.edu	37	18	9254875	9254875	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	18	9254875	9254875	A	G	SNP	ANKRD12	NM_015208.3	human	genbank	58_37c	+1	validated	missense	c.1610	p.H537R	1.000	superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ANXA10	0	genome.wustl.edu	37	4	169085364	169085364	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	4	169085364	169085364	G	A	SNP	ANXA10	NM_007193.3	human	genbank	58_37c	+1	reviewed	missense	c.325	p.E109K	0.994	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX	-	no_errors
APEX1	0	genome.wustl.edu	37	14	20924089	20924089	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	14	20924089	20924089	G	A	SNP	APEX1	NM_001641.2	human	genbank	58_37c	+1	reviewed	silent	c.75	p.K25	1.000	NULL	PatternScan_AP_NUCLEASE_F1_1,PatternScan_AP_NUCLEASE_F1_2,PatternScan_AP_NUCLEASE_F1_3,HMMPfam_Exo_endo_phos,superfamily_DNase I-like	-	no_errors
ARHGAP6	0	genome.wustl.edu	37	X	11206973	11206973	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	11206973	11206973	A	C	SNP	ARHGAP6	NM_013427.2	human	genbank	58_37c	-1	reviewed	missense	c.952	p.F318V	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
ARHGEF1	0	genome.wustl.edu	37	19	42399493	42399493	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	19	42399493	42399493	C	T	SNP	ARHGEF1	NM_199002.1	human	genbank	58_37c	+1	reviewed	missense	c.994	p.P332S	0.001	NULL	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,HMMSmart_PH,HMMPfam_RGS-like,superfamily_Regulat_G_prot_signal_superfam,superfamily_SSF50729	-	no_errors
BACH2	0	genome.wustl.edu	37	6	90718472	90718472	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	6	90718472	90718472	C	T	SNP	BACH2	NM_021813.2	human	genbank	58_37c	-1	validated	missense	c.92	p.R31Q	1.000	superfamily_BTB/POZ_fold,HMMPfam_BTB	HMMSmart_BTB,HMMSmart_BRLZ,PatternScan_BZIP_BASIC,superfamily_Euk_transcr_DNA,superfamily_BTB/POZ_fold,HMMPfam_bZIP_1,HMMPfam_BTB	-	no_errors
BCORL1	0	genome.wustl.edu	37	X	129147257	129147259	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	129147257	129147259	AGA	-	DEL	BCORL1	NM_021946.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.509_511	p.K171in_frame_del	0.988:0.981:0.995	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
C1orf55	0	genome.wustl.edu	37	1	226180127	226180127	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	226180127	226180127	A	G	SNP	C1orf55	NM_152608.3	human	genbank	58_37c	-1	validated	silent	c.492	p.A164	0.003	NULL	NULL	-	no_errors
CACNA1C	0	genome.wustl.edu	37	12	2558201	2558201	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	12	2558201	2558201	C	A	SNP	CACNA1C	NM_199460.2	human	genbank	58_37c	+1	reviewed	silent	c.537	p.I179	0.997	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CAD	0	genome.wustl.edu	37	2	27445851	27445851	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	27445851	27445851	G	T	SNP	CAD	NM_004341.3	human	genbank	58_37c	+1	reviewed	missense	c.755	p.C252F	1.000	HMMPfam_GATase,superfamily_SSF52317	HMMPfam_GATase,PatternScan_DIHYDROOROTASE_1,PatternScan_DIHYDROOROTASE_2,HMMPfam_CPSase_sm_chain,superfamily_CP_synthsmall,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_D3,superfamily_CarbamoylP_synth_lsu_oligo,HMMPfam_CPSase_L_chain,PatternScan_CARBAMOYLTRANSFERASE,superfamily_Asp/Orn_carbamoyltranf,HMMPfam_OTCace,HMMPfam_OTCace_N,HMMPfam_Amidohydro_1,superfamily_Metalo_hydrolase,HMMPfam_MGS,superfamily_PreATP-grasp-like,superfamily_SSF51556,superfamily_SSF52317,superfamily_SSF52335,superfamily_SSF56059	-	no_errors
CCDC150	0	genome.wustl.edu	37	2	197521850	197521850	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	197521850	197521850	C	T	SNP	CCDC150	NM_001080539.1	human	genbank	58_37c	+1	provisional	missense	c.566	p.S189L	0.994	NULL	NULL	-	no_errors
CLDN17	0	genome.wustl.edu	37	21	31538298	31538298	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	21	31538298	31538298	G	A	SNP	CLDN17	NM_012131.2	human	genbank	58_37c	-1	reviewed	missense	c.638	p.T213M	0.000	NULL	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors
CLSTN2	0	genome.wustl.edu	37	3	139894828	139894828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	139894828	139894828	C	T	SNP	CLSTN2	NM_022131.2	human	genbank	58_37c	+1	validated	missense	c.145	p.H49Y	1.000	HMMPfam_Cadherin,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	-	no_errors
COL11A1	0	genome.wustl.edu	37	1	103540280	103540280	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	103540280	103540280	C	A	SNP	COL11A1	NM_080629.2	human	genbank	58_37c	-1	reviewed	missense	c.545	p.C182F	1.000	HMMSmart_LamG,HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	HMMPfam_COLFI,HMMSmart_COLFI,HMMSmart_LamG,HMMSmart_TSPN,HMMPfam_Collagen,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	-	no_errors
COL12A1	0	genome.wustl.edu	37	6	75893097	75893097	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	6	75893097	75893097	G	A	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	silent	c.1560	p.G520	1.000	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
CYSLTR1	0	genome.wustl.edu	37	X	77528896	77528896	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	77528896	77528896	G	T	SNP	CYSLTR1	NM_006639.2	human	genbank	58_37c	-1	reviewed	silent	c.348	p.A116	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
DDX6	0	genome.wustl.edu	37	11	118629524	118629524	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	11	118629524	118629524	C	T	SNP	DDX6	NM_004397.4	human	genbank	58_37c	-1	reviewed	missense	c.952	p.E318K	1.000	superfamily_SSF52540	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
DGKK	0	genome.wustl.edu	37	X	50146532	50146532	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	50146532	50146532	G	A	SNP	DGKK	NM_001013742.1	human	genbank	58_37c	-1	validated	missense	c.1142	p.T381I	0.999	superfamily_Cysteine-rich domain	HMMPfam_DAGK_acc,HMMSmart_SM00045,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
DVL2	0	genome.wustl.edu	37	17	7129292	7129292	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	7129292	7129292	G	A	SNP	DVL2	NM_004422.2	human	genbank	58_37c	-1	reviewed	silent	c.2103	p.A701	0.931	NULL	"HMMPfam_DEP,HMMSmart_SM00049,HMMPfam_DIX,HMMSmart_SM00021,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Dishevelled,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
DZIP1L	0	genome.wustl.edu	37	3	137807223	137807223	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	137807223	137807223	G	A	SNP	DZIP1L	NM_173543.2	human	genbank	58_37c	-1	validated	nonsense	c.997	p.Q333*	0.949	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
EBF3	0	genome.wustl.edu	37	10	131671777	131671777	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	10	131671777	131671777	G	A	SNP	EBF3	NM_001005463.1	human	genbank	58_37c	-1	validated	silent	c.720	p.H240	1.000	NULL	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains,PatternScan_COE	-	no_errors
EFR3B	0	genome.wustl.edu	37	2	25314227	25314227	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	25314227	25314227	G	A	SNP	EFR3B	NM_014971.1	human	genbank	58_37c	+1	validated	missense	c.41	p.R14K	1.000	NULL	superfamily_ARM repeat	-	no_errors
ENSG00000198886	0	genome.wustl.edu	37	MT	11634	11634	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	MT	11634	11634	G	A	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.875	p.S292N	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000198899	0	genome.wustl.edu	37	MT	8741	8743	+	In_Frame_Del	DEL	TAG	TAG	-	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	TAG	TAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	MT	8741	8743	TAG	-	DEL	ENSG00000198899	ENST00000361899	human	ensembl	58_37c	+1	known	in_frame_del	c.215_217	p.V73in_frame_del	NULL	HMMPfam_ATP-synt_A,superfamily_F1F0 ATP synthase subunit A	HMMPfam_ATP-synt_A,PatternScan_ATPASE_A,superfamily_F1F0 ATP synthase subunit A	-	mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	2819	2819	+	RNA	SNP	G	A	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	MT	2819	2819	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000251657	0	genome.wustl.edu	37	5	178950687	178950687	+	RNA	SNP	C	C	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	5	178950687	178950687	C	A	SNP	ENSG00000251657	ENST00000506689	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors
EP400	0	genome.wustl.edu	37	12	132547093	132547094	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	12	132547093	132547094	-	CAG	INS	EP400	NM_015409.3	human	genbank	58_37c	+1	validated	in_frame_ins	c.8178_8179	p.2730in_frame_insQ	0.900:0.920	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HSA,superfamily_Homeodomain_like,HMMSmart_HSA,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
ERICH1	0	genome.wustl.edu	37	8	614677	614677	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	8	614677	614677	C	G	SNP	ERICH1	NM_207332.1	human	genbank	58_37c	-1	provisional	splice_site	c.1259-1	e6-1	0.995	-	-	-	no_errors
FAM65C	0	genome.wustl.edu	37	20	49219050	49219050	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	20	49219050	49219050	C	T	SNP	FAM65C	NM_080829.2	human	genbank	58_37c	-1	predicted	silent	c.1206	p.E402	0.985	NULL	NULL	-	no_errors
FAM75A2	0	genome.wustl.edu	37	9	39890233	39890233	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	9	39890233	39890233	G	T	SNP	FAM75A2	NM_001040065.1	human	genbank	58_37c	+1	predicted	missense	c.3220	p.D1074Y	0.001	NULL	NULL	-	no_errors
FANK1	0	genome.wustl.edu	37	10	127697978	127697978	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	10	127697978	127697978	C	T	SNP	FANK1	NM_145235.3	human	genbank	58_37c	+1	validated	nonsense	c.1009	p.Q337*	0.014	superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
FMNL2	0	genome.wustl.edu	37	2	153476066	153476067	+	In_Frame_Ins	INS	-	-	CCA	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	153476066	153476067	-	CCA	INS	FMNL2	NM_052905.3	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.1671_1672	p.561in_frame_insP	0.918:0.955	NULL	HMMSmart_FH2,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_FH2_actin_bd	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29628251	29628251	+	Missense_Mutation	SNP	A	A	G	rs75883191	byFrequency	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	20	29628251	29628251	A	G	SNP	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	missense	c.253	p.N85D	1.000	superfamily_Actin_crosslink,HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
FUT5	0	genome.wustl.edu	37	19	5866759	5866759	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	19	5866759	5866759	G	A	SNP	FUT5	NM_002034.2	human	genbank	58_37c	-1	validated	silent	c.978	p.H326	0.000	HMMPfam_Glyco_transf_10	HMMPfam_Glyco_transf_10	-	no_errors
GBAP1	0	genome.wustl.edu	37	1	155187367	155187367	+	RNA	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	155187367	155187367	C	T	SNP	GBAP1	NR_002188.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	pseudogene
GJA9	0	genome.wustl.edu	37	1	39341552	39341552	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	39341552	39341552	G	T	SNP	GJA9	NM_030772.3	human	genbank	58_37c	-1	provisional	silent	c.219	p.S73	1.000	HMMPfam_Connexin,HMMSmart_SM00037	HMMPfam_Connexin,HMMSmart_SM00037,PatternScan_CONNEXINS_1,PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC	-	no_errors
GPR45	0	genome.wustl.edu	37	2	105859375	105859375	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	105859375	105859375	C	T	SNP	GPR45	NM_007227.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1060	p.R354*	0.960	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HDAC5	0	genome.wustl.edu	37	17	42168760	42168760	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	42168760	42168760	G	A	SNP	HDAC5	NM_001015053.1	human	genbank	58_37c	-1	reviewed	missense	c.1268	p.S423F	1.000	NULL	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase	-	no_errors
HOXA4	0	genome.wustl.edu	37	7	27168854	27168854	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	7	27168854	27168854	G	A	SNP	HOXA4	NM_002141.4	human	genbank	58_37c	-1	reviewed	missense	c.953	p.S318F	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,PatternScan_ANTENNAPEDIA,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
KCNQ1	0	genome.wustl.edu	37	11	2683237	2683237	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	11	2683237	2683237	G	A	SNP	KCNQ1	NM_000218.2	human	genbank	58_37c	+1	reviewed	missense	c.1440	p.M480I	0.909	HMMPfam_KCNQ_channel	HMMPfam_Ion_trans,HMMPfam_KCNQ_channel,superfamily_Voltage-gated potassium channels	-	no_errors
KIAA0196	0	genome.wustl.edu	37	8	126059486	126059486	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	8	126059486	126059486	G	A	SNP	KIAA0196	NM_014846.3	human	genbank	58_37c	-1	reviewed	nonsense	c.2467	p.R823*	1.000	HMMPfam_Strumpellin	HMMPfam_Strumpellin	-	no_errors
KIAA0226	0	genome.wustl.edu	37	3	197402344	197402344	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	197402344	197402344	C	T	SNP	KIAA0226	NM_001145642.2	human	genbank	58_37c	-1	validated	missense	c.2554	p.E852K	1.000	NULL	HMMSmart_SM00593	-	no_errors
L1TD1	0	genome.wustl.edu	37	1	62672320	62672320	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	62672320	62672320	G	T	SNP	L1TD1	NM_019079.4	human	genbank	58_37c	+1	validated	missense	c.20	p.S7I	0.000	NULL	HMMPfam_Transposase_22	-	no_errors
LANCL2	0	genome.wustl.edu	37	7	55466215	55466215	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	7	55466215	55466215	A	G	SNP	LANCL2	NM_018697.3	human	genbank	58_37c	+1	validated	missense	c.422	p.N141S	0.993	HMMPfam_LANC_like	HMMPfam_LANC_like,superfamily_Glyco_trans_6hp	-	no_errors
LCK	0	genome.wustl.edu	37	1	32742227	32742227	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	32742227	32742227	G	A	SNP	LCK	NM_001042771.1	human	genbank	58_37c	+1	reviewed	silent	c.804	p.T268	0.909	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
LOC100129942	0	genome.wustl.edu	37	15	89533536	89533537	+	RNA	INS	-	-	GGCGGG	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	15	89533536	89533537	-	GGCGGG	INS	LOC100129942	XR_038237.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.000:0.001	-	-	-	pseudogene
LOC100287197	0	genome.wustl.edu	37	7	56891622	56891622	+	RNA	SNP	C	T	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	7	56891622	56891622	C	T	SNP	LOC100287197	XR_078364.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.699	-	-	-	pseudogene
LOC100287543	0	genome.wustl.edu	37	10	16859243	16859244	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	10	16859243	16859244	-	A	INS	LOC100287543	XM_002342962.1	human	genbank	58_37c	+1	model	frame_shift_ins	c.252_253	p.G84fs	0.000:0.001	NULL	NULL	-	no_errors
LOC100287647	0	genome.wustl.edu	37	16	33941726	33941726	+	Missense_Mutation	SNP	G	G	T	rs414350	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	16	33941726	33941726	G	T	SNP	LOC100287647	XM_002343473.1	human	genbank	58_37c	+1	model	missense	c.168	p.M56I	0.999	NULL	NULL	-	no_errors
LOC391798	0	genome.wustl.edu	37	5	75127127	75127127	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	5	75127127	75127127	G	A	SNP	LOC391798	XR_078320.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.049	-	-	-	pseudogene
LOC646214	0	genome.wustl.edu	37	15	21939603	21939603	+	RNA	SNP	A	A	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	15	21939603	21939603	A	G	SNP	LOC646214	NR_027053.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.010	-	-	-	pseudogene
LOC731797	0	genome.wustl.edu	37	19	35596982	35596982	+	RNA	SNP	A	G	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	19	35596982	35596982	A	G	SNP	LOC731797	XR_040843.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
LRIG1	0	genome.wustl.edu	37	3	66433747	66433747	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	66433747	66433747	G	A	SNP	LRIG1	NM_015541.2	human	genbank	58_37c	-1	validated	missense	c.2150	p.T717M	0.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMSmart_SM00365,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
MAGEB18	0	genome.wustl.edu	37	X	26157853	26157853	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	26157853	26157853	C	T	SNP	MAGEB18	NM_173699.3	human	genbank	58_37c	+1	validated	silent	c.751	p.L251	0.406	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MAPK13	0	genome.wustl.edu	37	6	36106757	36106757	+	Missense_Mutation	SNP	G	G	A	rs3179150	byFrequency	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	6	36106757	36106757	G	A	SNP	MAPK13	NM_002754.3	human	genbank	58_37c	+1	reviewed	missense	c.943	p.E315K	1.000	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAPT	0	genome.wustl.edu	37	17	44073872	44073872	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	44073872	44073872	G	C	SNP	MAPT	NM_001123066.3	human	genbank	58_37c	+1	validated	missense	c.1669	p.E557Q	1.000	NULL	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
MICALCL	0	genome.wustl.edu	37	11	12371384	12371384	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	11	12371384	12371384	G	A	SNP	MICALCL	NM_032867.2	human	genbank	58_37c	+1	validated	splice_site	c.1730-1	e6-1	1.000	-	-	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195512698	195512698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	195512698	195512698	G	A	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.5753	p.A1918V	0.006	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MYH8	0	genome.wustl.edu	37	17	10307784	10307784	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	10307784	10307784	C	T	SNP	MYH8	NM_002472.2	human	genbank	58_37c	-1	reviewed	missense	c.2551	p.E851K	1.000	NULL	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
NASP	0	genome.wustl.edu	37	1	46079800	46079800	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	46079800	46079800	G	A	SNP	NASP	NM_172164.1	human	genbank	58_37c	+1	reviewed	silent	c.1545	p.G515	0.995	superfamily_SSF48452	HMMPfam_TPR_1,HMMPfam_SHNi-TPR,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
NDUFB5	0	genome.wustl.edu	37	3	179322679	179322679	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	179322679	179322679	C	T	SNP	NDUFB5	NM_002492.2	human	genbank	58_37c	+1	reviewed	missense	c.76	p.R26C	0.000	HMMPfam_NDUF_B5	HMMPfam_NDUF_B5	-	no_errors
NDUFS8	0	genome.wustl.edu	37	11	67803732	67803732	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	11	67803732	67803732	G	A	SNP	NDUFS8	NM_002496.3	human	genbank	58_37c	+1	reviewed	missense	c.385	p.E129K	1.000	superfamily_alpha-helical ferredoxin	HMMPfam_Fer4,superfamily_alpha-helical ferredoxin,PatternScan_4FE4S_FER_1	-	no_errors
NEDD4L	0	genome.wustl.edu	37	18	56054707	56054707	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	18	56054707	56054707	A	C	SNP	NEDD4L	NM_001144967.1	human	genbank	58_37c	+1	validated	missense	c.2524	p.I842L	1.000	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
NLRX1	0	genome.wustl.edu	37	11	119043070	119043070	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	11	119043070	119043070	C	T	SNP	NLRX1	NM_024618.2	human	genbank	58_37c	+1	reviewed	missense	c.76	p.R26C	0.001	NULL	HMMSmart_SM00368,HMMPfam_NACHT,superfamily_RNI-like	-	no_errors
OR1I1	0	genome.wustl.edu	37	19	15198028	15198028	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	19	15198028	15198028	C	T	SNP	OR1I1	NM_001004713.1	human	genbank	58_37c	+1	provisional	missense	c.152	p.T51M	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR6C74	0	genome.wustl.edu	37	12	55641891	55641891	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	12	55641891	55641891	C	T	SNP	OR6C74	NM_001005490.1	human	genbank	58_37c	+1	provisional	silent	c.820	p.L274	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OTOP2	0	genome.wustl.edu	37	17	72926997	72926997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	72926997	72926997	G	A	SNP	OTOP2	NM_178160.2	human	genbank	58_37c	+1	validated	missense	c.1267	p.E423K	1.000	NULL	HMMPfam_DUF270	-	no_errors
PARD3	0	genome.wustl.edu	37	10	34649154	34649154	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	10	34649154	34649154	C	T	SNP	PARD3	NM_019619.3	human	genbank	58_37c	-1	validated	missense	c.1741	p.D581N	1.000	superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
PIR	0	genome.wustl.edu	37	X	15425651	15425651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	15425651	15425651	G	A	SNP	PIR	NM_001018109.1	human	genbank	58_37c	-1	reviewed	missense	c.587	p.T196M	0.986	HMMPfam_Pirin_C,superfamily_RmlC_like_cupin	HMMPfam_Pirin,HMMPfam_Pirin_C,superfamily_RmlC_like_cupin	-	no_errors
PNN	0	genome.wustl.edu	37	14	39648302	39648302	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	14	39648302	39648302	G	A	SNP	PNN	NM_002687.3	human	genbank	58_37c	+1	validated	missense	c.506	p.R169Q	1.000	HMMPfam_Pinin_SDK_memA	HMMPfam_Pinin_SDK_memA,HMMPfam_Pinin_SDK_N	-	no_errors
PPA2	0	genome.wustl.edu	37	4	106395125	106395125	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	4	106395125	106395125	G	A	SNP	PPA2	NM_176869.2	human	genbank	58_37c	-1	reviewed	missense	c.83	p.S28L	0.012	NULL	HMMPfam_Pyrophosphatase,PatternScan_PPASE,superfamily_Inorganic pyrophosphatase	-	no_errors
PPHLN1	0	genome.wustl.edu	37	12	42778795	42778796	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	12	42778795	42778796	AG	-	DEL	PPHLN1	NM_016488.6	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.565_566	p.D190fs	1.000:1.000	NULL	NULL	-	no_errors
PRR23B	0	genome.wustl.edu	37	3	138739098	138739098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	3	138739098	138739098	C	T	SNP	PRR23B	NM_001013650.2	human	genbank	58_37c	-1	validated	missense	c.406	p.V136I	0.000	HMMPfam_DUF2476	HMMPfam_DUF2476	-	no_errors
PTPN18	0	genome.wustl.edu	37	2	131127382	131127382	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	131127382	131127382	C	A	SNP	PTPN18	NM_014369.3	human	genbank	58_37c	+1	reviewed	silent	c.528	p.L176	0.085	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799	HMMPfam_Y_phosphatase,HMMSmart_PTPc,PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799	-	no_errors
RPS6KA3	0	genome.wustl.edu	37	X	20212321	20212321	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	X	20212321	20212321	G	A	SNP	RPS6KA3	NM_004586.2	human	genbank	58_37c	-1	reviewed	missense	c.472	p.R158C	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
RYR2	0	genome.wustl.edu	37	1	237675055	237675055	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	237675055	237675055	G	A	SNP	RYR2	NM_001035.2	human	genbank	58_37c	+1	reviewed	missense	c.2786	p.R929H	1.000	HMMPfam_RyR	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SCAMP1	0	genome.wustl.edu	37	5	77717661	77717661	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	5	77717661	77717661	G	A	SNP	SCAMP1	NM_004866.4	human	genbank	58_37c	+1	reviewed	missense	c.509	p.C170Y	1.000	HMMPfam_SCAMP	HMMPfam_SCAMP	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
SLC4A5	0	genome.wustl.edu	37	2	74474339	74474339	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	2	74474339	74474339	A	G	SNP	SLC4A5	NM_021196.3	human	genbank	58_37c	-1	reviewed	missense	c.1883	p.I628T	1.000	HMMPfam_HCO3_cotransp	HMMPfam_HCO3_cotransp,HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein	-	no_errors
SPRY1	0	genome.wustl.edu	37	4	124323620	124323620	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	4	124323620	124323620	C	T	SNP	SPRY1	NM_005841.1	human	genbank	58_37c	+1	validated	missense	c.874	p.R292C	0.941	HMMPfam_Sprouty	HMMPfam_Sprouty	-	no_errors
STX4	0	genome.wustl.edu	37	16	31050965	31050965	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	16	31050965	31050965	C	T	SNP	STX4	NM_004604.3	human	genbank	58_37c	+1	provisional	missense	c.806	p.A269V	0.998	NULL	HMMPfam_SNARE,HMMSmart_t_SNARE,HMMPfam_Syntaxin,HMMSmart_SynN,PatternScan_SYNTAXIN,superfamily_t-snare	-	no_errors
SYNGAP1	0	genome.wustl.edu	37	6	33403296	33403296	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	6	33403296	33403296	C	T	SNP	SYNGAP1	NM_006772.2	human	genbank	58_37c	+1	reviewed	missense	c.668	p.T223I	1.000	HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00233,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	-	no_errors
TEK	0	genome.wustl.edu	37	9	27183605	27183605	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	9	27183605	27183605	C	G	SNP	TEK	NM_000459.3	human	genbank	58_37c	+1	reviewed	silent	c.1179	p.L393	0.050	superfamily_SSF48726	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_fn3,HMMSmart_FN3,HMMSmart_EGF,PatternScan_PROTEIN_KINASE_TYR,superfamily_FN_III-like,superfamily_Kinase_like,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Ig_Tie2_1,superfamily_SSF48726	-	no_errors
TP53	0	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	C	rs28934574	byCluster	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	17	7577094	7577094	G	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.844	p.R282G	0.997	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TPD52L2	0	genome.wustl.edu	37	20	62505106	62505106	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	20	62505106	62505106	C	T	SNP	TPD52L2	NM_199360.1	human	genbank	58_37c	+1	validated	missense	c.251	p.S84F	0.833	HMMPfam_TPD52	HMMPfam_TPD52	-	no_errors
TXLNA	0	genome.wustl.edu	37	1	32647073	32647073	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	1	32647073	32647073	G	A	SNP	TXLNA	NM_175852.3	human	genbank	58_37c	+1	validated	missense	c.400	p.E134K	1.000	NULL	HMMPfam_Taxilin	-	no_errors
VCAN	0	genome.wustl.edu	37	5	82817555	82817555	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	5	82817555	82817555	G	T	SNP	VCAN	NM_004385.4	human	genbank	58_37c	+1	reviewed	missense	c.3430	p.G1144C	0.547	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMSmart_SM00179,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_V-set,superfamily_Complement control module/SCR domain,superfamily_C-type lectin-like,PatternScan_EGF_CA,PatternScan_C_TYPE_LECTIN_1,superfamily_Immunoglobulin,superfamily_EGF/Laminin	-	no_errors
WDR85	0	genome.wustl.edu	37	9	140449871	140449871	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	9	140449871	140449871	C	T	SNP	WDR85	NM_138778.2	human	genbank	58_37c	-1	provisional	silent	c.1179	p.Q393	0.000	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZNF551	0	genome.wustl.edu	37	19	58197963	58197966	+	Frame_Shift_Del	DEL	AGAT	AGAT	-	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	AGAT	AGAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	19	58197963	58197966	AGAT	-	DEL	ZNF551	NM_138347.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.272_275	p.K91fs	0.008:0.003:0.003:0.025	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF563	0	genome.wustl.edu	37	19	12429836	12429836	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XJ-01A-11D-A14K-09	TCGA-D8-A1XJ-10A-01W-A16I-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a37b27a2-c3b0-4f62-82a2-94e9205b1d6e	bb7de09d-aefe-45f2-8e12-7af57c30cbf4	19	12429836	12429836	G	A	SNP	ZNF563	NM_145276.2	human	genbank	58_37c	-1	validated	nonsense	c.1003	p.R335*	0.976	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
