Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACSL5	0	genome.wustl.edu	37	10	114185175	114185175	+	Missense_Mutation	SNP	T	T	C	rs144236262	byFrequency	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	10	114185175	114185175	T	C	SNP	ACSL5	NM_016234.3	human	genbank	58_37c	+1	reviewed	missense	c.1841	p.I614T	1.000	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
ADAM23	0	genome.wustl.edu	37	2	207431970	207431970	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	2	207431970	207431970	C	T	SNP	ADAM23	NM_003812.2	human	genbank	58_37c	+1	reviewed	missense	c.1418	p.S473L	1.000	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_CR,HMMSmart_SM00608,PatternScan_EGF_1,HMMPfam_EGF_2,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AKT1	207	genome.wustl.edu	37	14	105246551	105246551	+	Missense_Mutation	SNP	C	C	T	rs121434592	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	14	105246551	105246551	C	T	SNP	AKT1	NM_001014431.1	human	genbank	58_37c	-1	reviewed	missense	c.49	p.E17K	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like	-	no_errors
ANKRD33B	0	genome.wustl.edu	37	5	10618519	10618519	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	5	10618519	10618519	C	T	SNP	ANKRD33B	ENST00000296657	human	ensembl	58_37c	+1	known	silent	c.441	p.D147	0.995	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
C20orf112	0	genome.wustl.edu	37	20	31041156	31041156	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	20	31041156	31041156	C	T	SNP	C20orf112	NM_080616.3	human	genbank	58_37c	-1	validated	missense	c.716	p.R239H	1.000	NULL	PatternScan_ILVD_EDD_1	-	no_errors
C5orf51	0	genome.wustl.edu	37	5	41911259	41911259	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	5	41911259	41911259	G	A	SNP	C5orf51	NM_175921.4	human	genbank	58_37c	+1	validated	missense	c.464	p.R155K	0.052	NULL	NULL	-	no_errors
C6orf97	0	genome.wustl.edu	37	6	151869573	151869573	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	6	151869573	151869573	A	G	SNP	C6orf97	NM_025059.3	human	genbank	58_37c	+1	validated	silent	c.723	p.R241	1.000	NULL	superfamily_Prefoldin	-	no_errors
CCNYL3	0	genome.wustl.edu	37	16	34285738	34285738	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	16	34285738	34285738	A	T	SNP	CCNYL3	XM_925865.4	human	genbank	58_37c	+1	model	missense	c.454	p.N152Y	1.000	HMMPfam_Cyclin_N,superfamily_Cyclin-like	HMMPfam_Cyclin_N,superfamily_Cyclin-like	-	no_errors
ENSG00000198899	0	genome.wustl.edu	37	MT	9182	9182	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	MT	9182	9182	G	A	SNP	ENSG00000198899	ENST00000361899	human	ensembl	58_37c	+1	known	missense	c.656	p.S219N	NULL	HMMPfam_ATP-synt_A,superfamily_F1F0 ATP synthase subunit A	HMMPfam_ATP-synt_A,PatternScan_ATPASE_A,superfamily_F1F0 ATP synthase subunit A	-	mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	1767	1767	+	RNA	SNP	G	A	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	MT	1767	1767	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000232637	0	genome.wustl.edu	37	1	146215204	146215204	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	1	146215204	146215204	G	C	SNP	ENSG00000232637	ENST00000436832	human	ensembl	58_37c	-1	known	nonsense	c.2646	p.Y882*	0.003	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors
ENSG00000249665	0	genome.wustl.edu	37	8	86786410	86786410	+	RNA	SNP	A	A	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	8	86786410	86786410	A	T	SNP	ENSG00000249665	ENST00000503540	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.024	-	-	-	no_errors
FLG2	0	genome.wustl.edu	37	1	152329961	152329961	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	1	152329961	152329961	T	A	SNP	FLG2	NM_001014342.2	human	genbank	58_37c	-1	provisional	nonsense	c.301	p.K101*	0.993	NULL	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_efhand,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29625924	29625925	+	In_Frame_Ins	INS	-	-	CTT	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	20	29625924	29625925	-	CTT	INS	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	in_frame_ins	c.168_169	p.57in_frame_insL	0.996:0.999	superfamily_Actin_crosslink,HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
GALNTL6	0	genome.wustl.edu	37	4	173150860	173150860	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	4	173150860	173150860	G	A	SNP	GALNTL6	NM_001034845.2	human	genbank	58_37c	+1	validated	silent	c.192	p.L64	1.000	NULL	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
GRLF1	0	genome.wustl.edu	37	19	47424345	47424345	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	19	47424345	47424345	C	T	SNP	GRLF1	NM_004491.4	human	genbank	58_37c	+1	reviewed	nonsense	c.2413	p.Q805*	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_FF,HMMSmart_SM00441,superfamily_GTPase activation domain GAP,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HYAL2	0	genome.wustl.edu	37	3	50357256	50357256	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	3	50357256	50357256	C	A	SNP	HYAL2	NM_003773.4	human	genbank	58_37c	-1	reviewed	missense	c.665	p.S222I	0.993	HMMPfam_Glyco_hydro_56,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_56,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_(Trans)glycosidases	-	no_errors
KIAA0284	0	genome.wustl.edu	37	14	105352885	105352890	+	In_Frame_Del	DEL	GCAGGA	GCAGGA	-	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	GCAGGA	GCAGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	14	105352885	105352890	GCAGGA	-	DEL	KIAA0284	NM_001112726.1	human	genbank	58_37c	+1	validated	in_frame_del	c.2309_2314	p.RS771in_frame_del	0.001:0.000:0.000:0.003:0.103:0.181	NULL	HMMPfam_FHA,HMMSmart_FHA,superfamily_SMAD_FHA	-	no_errors
LBXCOR1	0	genome.wustl.edu	37	15	68124619	68124619	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	15	68124619	68124619	G	A	SNP	LBXCOR1	NM_001031807.1	human	genbank	58_37c	+1	provisional	silent	c.2463	p.L821	1.000	NULL	HMMPfam_Ski_Sno,superfamily_Putativ_DNA_bind,superfamily_SAND_like,HMMPfam_c-SKI_SMAD_bind	-	no_errors
LOC283685	0	genome.wustl.edu	37	15	23685207	23685207	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	15	23685207	23685207	T	C	SNP	LOC283685	XM_002343322.1	human	genbank	58_37c	-1	model	missense	c.1970	p.E657G	0.004	NULL	NULL	-	no_errors
LOC729225	0	genome.wustl.edu	37	1	52834392	52834392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	1	52834392	52834392	C	T	SNP	LOC729225	XM_001129716.1	human	genbank	58_37c	-1	model	missense	c.241	p.E81K	0.125	NULL	NULL	-	no_errors
MACF1	0	genome.wustl.edu	37	1	39797714	39797714	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	1	39797714	39797714	G	T	SNP	MACF1	NM_033044.2	human	genbank	58_37c	+1	reviewed	silent	c.774	p.T258	0.976	HMMPfam_Plectin,HMMSmart_PLEC,superfamily_SSF75399	HMMPfam_Plectin,HMMSmart_PLEC,HMMPfam_Spectrin,HMMSmart_EFh,HMMPfam_GAS2,HMMSmart_GAS2,PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SPEC,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin,superfamily_SSF47473,superfamily_SSF75399	-	no_errors
MUC12	0	genome.wustl.edu	37	7	100641745	100641745	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	7	100641745	100641745	G	A	SNP	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	missense	c.8330	p.R2777H	0.000	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
MUC20	0	genome.wustl.edu	37	3	195452649	195452649	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	3	195452649	195452649	C	T	SNP	MUC20	ENST00000436408	human	ensembl	58_37c	+1	known	missense	c.1175	p.P392L	0.001	NULL	NULL	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16914275	16914275	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	1	16914275	16914275	C	A	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	missense	c.511	p.D171Y	0.004	NULL	HMMPfam_DUF1220	-	no_errors
PHC3	0	genome.wustl.edu	37	3	169847215	169847215	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	3	169847215	169847215	T	C	SNP	PHC3	NM_024947.3	human	genbank	58_37c	-1	validated	missense	c.1045	p.I349V	0.986	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	-	no_errors
RABL2B	0	genome.wustl.edu	37	22	51215160	51215160	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	22	51215160	51215160	G	T	SNP	RABL2B	NM_001130923.1	human	genbank	58_37c	-1	reviewed	missense	c.155	p.S52Y	1.000	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ROS1	0	genome.wustl.edu	37	6	117658378	117658378	+	Silent	SNP	C	C	T	rs146280016	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	6	117658378	117658378	C	T	SNP	ROS1	NM_002944.2	human	genbank	58_37c	-1	reviewed	silent	c.5205	p.T1735	0.967	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	HMMSmart_LY,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_II,HMMPfam_fn3,HMMSmart_FN3,PatternScan_PROTEIN_KINASE_TYR,superfamily_FN_III-like,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF63825	-	no_errors
SLC2A13	0	genome.wustl.edu	37	12	40223928	40223928	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	12	40223928	40223928	A	G	SNP	SLC2A13	NM_052885.3	human	genbank	58_37c	-1	validated	silent	c.1422	p.S474	0.721	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,PatternScan_SUGAR_TRANSPORT_2,superfamily_MFS general substrate transporter	-	no_errors
SPTA1	0	genome.wustl.edu	37	1	158590173	158590173	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	1	158590173	158590173	C	T	SNP	SPTA1	NM_003126.2	human	genbank	58_37c	-1	reviewed	silent	c.6204	p.E2068	0.982	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Spectrin,HMMPfam_efhand_Ca_insen,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
ST8SIA6	0	genome.wustl.edu	37	10	17373535	17373535	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	10	17373535	17373535	A	T	SNP	ST8SIA6	NM_001004470.1	human	genbank	58_37c	-1	validated	missense	c.394	p.C132S	1.000	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
SYT3	0	genome.wustl.edu	37	19	51132704	51132704	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	19	51132704	51132704	C	T	SNP	SYT3	NM_032298.2	human	genbank	58_37c	-1	validated	silent	c.1128	p.E376	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
TTC21A	0	genome.wustl.edu	37	3	39174599	39174599	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	3	39174599	39174599	G	A	SNP	TTC21A	NM_001105513.2	human	genbank	58_37c	+1	validated	missense	c.2643	p.M881I	0.998	superfamily_TPR-like	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
TTC28	0	genome.wustl.edu	37	22	28494912	28494912	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	22	28494912	28494912	C	T	SNP	TTC28	NM_001145418.1	human	genbank	58_37c	-1	validated	missense	c.3538	p.V1180I	1.000	NULL	HMMPfam_TPR_1,HMMPfam_TPR_2,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
UNC13C	0	genome.wustl.edu	37	15	54590048	54590048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	15	54590048	54590048	G	A	SNP	UNC13C	NM_001080534.1	human	genbank	58_37c	+1	provisional	missense	c.4028	p.R1343Q	0.978	superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_C2_CaLB,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD,superfamily_SSF57889	-	no_errors
ZNF217	0	genome.wustl.edu	37	20	52188259	52188259	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	20	52188259	52188259	C	G	SNP	ZNF217	NM_006526.2	human	genbank	58_37c	-1	validated	splice_site	c.3147+1	e4+1	0.996	-	-	-	no_errors
ZNF614	0	genome.wustl.edu	37	19	52521732	52521732	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	19	52521732	52521732	C	T	SNP	ZNF614	NM_025040.3	human	genbank	58_37c	-1	validated	missense	c.31	p.E11K	0.631	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF749	0	genome.wustl.edu	37	19	57956839	57956839	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XU-01A-11D-A14K-09	TCGA-D8-A1XU-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	55c547ee-7cc9-4b7a-aaca-22f2a8c8c3a4	fd7947df-6e44-4e50-9fe7-e16b0ddc3eb5	19	57956839	57956839	G	T	SNP	ZNF749	NM_001023561.2	human	genbank	58_37c	+1	provisional	nonsense	c.2323	p.G775*	0.839	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
