Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
BCL2L11	0	genome.wustl.edu	37	2	111886207	111886207	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	2	111886207	111886207	T	A	SNP	BCL2L11	NM_207002.2	human	genbank	58_37c	+1	reviewed	missense	c.218	p.V73D	0.007	NULL	HMMPfam_Bim_N	-	no_errors
CCM2	0	genome.wustl.edu	37	7	45113873	45113873	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	7	45113873	45113873	G	A	SNP	CCM2	NM_001029835.2	human	genbank	58_37c	+1	reviewed	missense	c.983	p.R328H	1.000	NULL	NULL	-	no_errors
DCC	0	genome.wustl.edu	37	18	50278619	50278619	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	18	50278619	50278619	C	G	SNP	DCC	NM_005215.3	human	genbank	58_37c	+1	reviewed	missense	c.287	p.S96C	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_Neogenin_C,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DSEL	0	genome.wustl.edu	37	18	65178268	65178268	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	18	65178268	65178268	A	T	SNP	DSEL	NM_032160.2	human	genbank	58_37c	-1	validated	missense	c.3608	p.L1203Q	0.672	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000198804	0	genome.wustl.edu	37	MT	6277	6277	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	MT	6277	6277	G	A	SNP	ENSG00000198804	ENST00000361624	human	ensembl	58_37c	+1	known	missense	c.374	p.G125D	NULL	HMMPfam_COX1,superfamily_Cytochrome c oxidase subunit I-like	HMMPfam_COX1,PatternScan_COX1_CUB,superfamily_Cytochrome c oxidase subunit I-like	-	mismatch_between_exon_seq_and_reference
ENSG00000201990	0	genome.wustl.edu	37	7	6043965	6043966	+	RNA	DEL	TG	TG	-	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	TG	TG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	7	6043965	6043966	TG	-	DEL	ENSG00000201990	ENST00000365120	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.544:0.504	-	-	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	2256	2256	+	RNA	SNP	T	T	C	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	MT	2256	2256	T	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	3115	3115	+	RNA	SNP	T	T	C	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	MT	3115	3115	T	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000231520	0	genome.wustl.edu	37	10	42380254	42380254	+	Missense_Mutation	SNP	C	C	G	rs191944116	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	10	42380254	42380254	C	G	SNP	ENSG00000231520	ENST00000429113	human	ensembl	58_37c	-1	known	missense	c.8	p.W3S	0.000	NULL	NULL	-	no_stop_codon
ENSG00000249665	0	genome.wustl.edu	37	8	86786337	86786337	+	RNA	SNP	C	C	A	rs150701799	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	8	86786337	86786337	C	A	SNP	ENSG00000249665	ENST00000503540	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors
FAAH2	0	genome.wustl.edu	37	X	57358083	57358083	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	X	57358083	57358083	A	G	SNP	FAAH2	NM_174912.3	human	genbank	58_37c	+1	reviewed	silent	c.465	p.T155	0.766	HMMPfam_Amidase,superfamily_Amidase signature (AS) enzymes	HMMPfam_Amidase,superfamily_Amidase signature (AS) enzymes,PatternScan_AMIDASES	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29623210	29623210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	20	29623210	29623210	C	T	SNP	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	missense	c.22	p.H8Y	1.000	HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
GRIK5	0	genome.wustl.edu	37	19	42569462	42569462	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	19	42569462	42569462	C	T	SNP	GRIK5	NM_002088.3	human	genbank	58_37c	-1	reviewed	missense	c.157	p.G53R	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
GTPBP5	0	genome.wustl.edu	37	20	60772932	60772932	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	20	60772932	60772932	C	G	SNP	GTPBP5	NM_015666.3	human	genbank	58_37c	+1	validated	missense	c.377	p.S126W	0.958	HMMPfam_GTP1_OBG,superfamily_GTP1_OBG_sub	HMMPfam_MMR_HSR1,HMMPfam_GTP1_OBG,superfamily_GTP1_OBG_sub,superfamily_SSF52540	-	no_errors
HUWE1	0	genome.wustl.edu	37	X	53562452	53562452	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	X	53562452	53562452	A	C	SNP	HUWE1	NM_031407.4	human	genbank	58_37c	-1	reviewed	missense	c.12542	p.F4181C	1.000	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_UBA,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WWE,superfamily_UBA-like,HMMPfam_DUF908,HMMPfam_DUF913,HMMSmart_SM00165,superfamily_ARM repeat	-	no_errors
IL1RAPL1	0	genome.wustl.edu	37	X	29935696	29935696	+	Silent	SNP	T	T	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	X	29935696	29935696	T	G	SNP	IL1RAPL1	NM_014271.3	human	genbank	58_37c	+1	reviewed	silent	c.894	p.V298	0.998	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LOC100287541	0	genome.wustl.edu	37	22	18843242	18843242	+	Missense_Mutation	SNP	C	C	G	rs140437	byHapMap	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	22	18843242	18843242	C	G	SNP	LOC100287541	XM_002344189.1	human	genbank	58_37c	+1	model	missense	c.358	p.H120D	0.997	NULL	PatternScan_PHOSPHOPANTETHEINE	-	no_errors
LOC728377	0	genome.wustl.edu	37	7	143982408	143982408	+	RNA	SNP	C	C	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	7	143982408	143982408	C	T	SNP	LOC728377	XR_078379.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
MAML1	0	genome.wustl.edu	37	5	179200977	179200977	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	5	179200977	179200977	A	T	SNP	MAML1	NM_014757.4	human	genbank	58_37c	+1	reviewed	missense	c.2150	p.N717I	0.108	NULL	HMMPfam_MamL-1	-	no_errors
NMBR	0	genome.wustl.edu	37	6	142396871	142396871	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	6	142396871	142396871	T	A	SNP	NMBR	NM_002511.2	human	genbank	58_37c	-1	validated	missense	c.1087	p.T363S	1.000	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDH10	0	genome.wustl.edu	37	4	134073920	134073920	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	4	134073920	134073920	C	T	SNP	PCDH10	NM_032961.1	human	genbank	58_37c	+1	reviewed	silent	c.2625	p.S875	1.000	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,PatternScan_EGF_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDH19	0	genome.wustl.edu	37	X	99662058	99662058	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	X	99662058	99662058	C	G	SNP	PCDH19	NM_001105243.1	human	genbank	58_37c	-1	reviewed	missense	c.1538	p.G513A	1.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PLCG1	0	genome.wustl.edu	37	20	39798164	39798164	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	20	39798164	39798164	T	A	SNP	PLCG1	NM_002660.2	human	genbank	58_37c	+1	reviewed	missense	c.2648	p.I883N	1.000	HMMSmart_PH,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF50729	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_SH2,HMMSmart_SH2,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,HMMPfam_PH,HMMSmart_PH,superfamily_C2_CaLB,superfamily_PLC-like_Pdiesterase_TIM-brl,PatternScan_EF_HAND_1,superfamily_SSF47473,superfamily_SSF50729,superfamily_SSF55550	-	no_errors
SAMD1	0	genome.wustl.edu	37	19	14199928	14199928	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	19	14199928	14199928	T	G	SNP	SAMD1	NM_138352.1	human	genbank	58_37c	-1	provisional	missense	c.883	p.T295P	0.768	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	-	no_errors
SHROOM4	0	genome.wustl.edu	37	X	50377007	50377007	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	X	50377007	50377007	T	G	SNP	SHROOM4	NM_020717.3	human	genbank	58_37c	-1	reviewed	missense	c.2066	p.Q689P	0.536	NULL	HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_ASD2,HMMPfam_ASD1	-	no_errors
SLC5A5	0	genome.wustl.edu	37	19	17986867	17986867	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	19	17986867	17986867	G	A	SNP	SLC5A5	NM_000453.2	human	genbank	58_37c	+1	reviewed	missense	c.650	p.R217H	0.000	NULL	HMMPfam_SSF,PatternScan_NA_SOLUT_SYMP_1,PatternScan_NA_SOLUT_SYMP_2	-	no_errors
STAG3L2	0	genome.wustl.edu	37	7	74300557	74300564	+	Frame_Shift_Del	DEL	AGAGCTCC	AGAGCTCC	-	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	AGAGCTCC	AGAGCTCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	7	74300557	74300564	AGAGCTCC	-	DEL	STAG3L2	NM_001025202.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.250_243	p.E82fs	1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
TMEM181	0	genome.wustl.edu	37	6	159029468	159029468	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	6	159029468	159029468	G	C	SNP	TMEM181	NM_020823.1	human	genbank	58_37c	+1	validated	silent	c.1188	p.L396	1.000	NULL	NULL	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578556	7578556	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	17	7578556	7578556	T	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	splice_site	c.376-2	e4-2	1.000	-	-	-	no_errors
TUBG1	0	genome.wustl.edu	37	17	40762178	40762178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	17	40762178	40762178	G	A	SNP	TUBG1	NM_001070.4	human	genbank	58_37c	+1	reviewed	silent	c.102	p.E34	1.000	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like	HMMPfam_Tubulin,superfamily_Tubulin C-terminal domain-like,PatternScan_TUBULIN,HMMPfam_Tubulin_C,superfamily_Tubulin nucleotide-binding domain-like	-	no_errors
UBR5	0	genome.wustl.edu	37	8	103297830	103297830	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	8	103297830	103297830	T	C	SNP	UBR5	NM_015902.4	human	genbank	58_37c	-1	reviewed	missense	c.5395	p.M1799V	1.000	NULL	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_PABP,HMMSmart_PolyA,superfamily_PABP_HYD,HMMPfam_zf-UBR,HMMSmart_ZnF_UBR1	-	no_errors
WHSC1L1	0	genome.wustl.edu	37	8	38162915	38162915	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	8	38162915	38162915	C	T	SNP	WHSC1L1	NM_023034.1	human	genbank	58_37c	-1	reviewed	missense	c.2291	p.R764H	1.000	HMMSmart_SM00249	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00249,HMMSmart_SM00508,HMMSmart_SM00570,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_Tudor/PWWP/MBT,superfamily_SET domain	-	no_errors
ZNF275	0	genome.wustl.edu	37	X	152612458	152612458	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	X	152612458	152612458	G	A	SNP	ZNF275	NM_001080485.2	human	genbank	58_37c	+1	validated	silent	c.315	p.E105	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF292	0	genome.wustl.edu	37	6	87965080	87965080	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1II-01A-11D-A142-09	TCGA-E2-A1II-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	698c8a73-c6b6-45bd-82fc-9bd0f140729d	22909312-dbd6-43ff-b741-78400439c1b6	6	87965080	87965080	T	G	SNP	ZNF292	NM_015021.1	human	genbank	58_37c	+1	validated	missense	c.1733	p.F578C	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
