Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC9	0	genome.wustl.edu	37	12	22005315	22005315	+	Missense_Mutation	SNP	G	G	A	rs140872303	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	12	22005315	22005315	G	A	SNP	ABCC9	NM_005691.2	human	genbank	58_37c	-1	reviewed	missense	c.2630	p.T877M	1.000	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
BZRAP1	0	genome.wustl.edu	37	17	56382901	56382901	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	17	56382901	56382901	C	G	SNP	BZRAP1	NM_004758.2	human	genbank	58_37c	-1	validated	missense	c.5361	p.E1787D	1.000	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_SH3_2	-	no_errors
C4orf34	0	genome.wustl.edu	37	4	39553738	39553738	+	Nonstop_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	4	39553738	39553738	T	A	SNP	C4orf34	ENST00000511809	human	ensembl	58_37c	-1	known	nonstop	c.165	p.*55C	0.178	NULL	NULL	-	no_errors
CALR3	0	genome.wustl.edu	37	19	16593495	16593495	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	19	16593495	16593495	C	T	SNP	CALR3	NM_145046.3	human	genbank	58_37c	-1	validated	silent	c.780	p.P260	0.010	HMMPfam_Calreticulin,superfamily_ConA_like_lec_gl,superfamily_Calret_calnex_P	PatternScan_ER_TARGET,HMMPfam_Calreticulin,superfamily_ConA_like_lec_gl,superfamily_Calret_calnex_P,PatternScan_CALRETICULIN_1,PatternScan_CALRETICULIN_2	-	no_errors
CHAF1B	0	genome.wustl.edu	37	21	37771831	37771831	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	21	37771831	37771831	A	G	SNP	CHAF1B	NM_005441.2	human	genbank	58_37c	+1	reviewed	silent	c.591	p.V197	0.210	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DCAF8L1	0	genome.wustl.edu	37	X	27999081	27999081	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	X	27999081	27999081	C	A	SNP	DCAF8L1	NM_001017930.1	human	genbank	58_37c	-1	reviewed	missense	c.371	p.G124V	0.077	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DHRS12	0	genome.wustl.edu	37	13	52345423	52345423	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	13	52345423	52345423	G	A	SNP	DHRS12	NM_001031719.1	human	genbank	58_37c	-1	provisional	silent	c.768	p.L256	0.001	NULL	superfamily_NAD(P)-bd	-	no_errors
EMID2	0	genome.wustl.edu	37	7	101091052	101091052	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	7	101091052	101091052	G	T	SNP	EMID2	ENST00000397927	human	ensembl	58_37c	+1	known	silent	c.369	p.G123	0.992	HMMPfam_EMI	HMMPfam_Collagen,HMMPfam_EMI	-	no_errors
ENSG00000229527	0	genome.wustl.edu	37	19	24362994	24362995	+	Frame_Shift_Ins	INS	-	-	AG	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	19	24362994	24362995	-	AG	INS	ENSG00000229527	ENST00000441339	human	ensembl	58_37c	+1	known	frame_shift_ins	c.114_115	p.R39fs	0.127:0.162	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ENSG00000234045	0	genome.wustl.edu	37	18	61391449	61391450	+	In_Frame_Ins	INS	-	-	TCT	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	18	61391449	61391450	-	TCT	INS	ENSG00000234045	ENST00000447812	human	ensembl	58_37c	-1	known	in_frame_ins	c.186_185	p.65in_frame_insE	0.000:0.001	NULL	NULL	-	no_start_codon:no_stop_codon
F8	0	genome.wustl.edu	37	X	154159944	154159944	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	X	154159944	154159944	C	T	SNP	F8	NM_000132.3	human	genbank	58_37c	-1	reviewed	nonsense	c.2121	p.W707*	1.000	PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxins	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMPfam_Cu-oxidase,PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxins,superfamily_Galactose-binding domain-like,HMMPfam_Cu-oxidase_2,HMMPfam_Cu-oxidase_3	-	no_errors
FREM2	0	genome.wustl.edu	37	13	39453040	39453040	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	13	39453040	39453040	G	A	SNP	FREM2	NM_207361.4	human	genbank	58_37c	+1	reviewed	missense	c.8932	p.D2978N	1.000	NULL	HMMPfam_Calx-beta,HMMSmart_SM00237	-	no_errors
FXR1	0	genome.wustl.edu	37	3	180680687	180680687	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	3	180680687	180680687	G	C	SNP	FXR1	NM_005087.2	human	genbank	58_37c	+1	reviewed	missense	c.1094	p.R365T	1.000	superfamily_Eukaryotic type KH-domain (KH-domain type I)	HMMSmart_SM00322,HMMPfam_Agenet,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors
ITGA8	0	genome.wustl.edu	37	10	15614253	15614253	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	10	15614253	15614253	A	G	SNP	ITGA8	NM_003638.1	human	genbank	58_37c	-1	provisional	missense	c.2594	p.L865P	0.676	HMMPfam_Integrin_alpha2,superfamily_SSF69179	HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_Int_alpha,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_SSF69179,superfamily_SSF69318	-	no_errors
KCNA5	0	genome.wustl.edu	37	12	5153951	5153951	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	12	5153951	5153951	T	A	SNP	KCNA5	NM_002234.2	human	genbank	58_37c	+1	reviewed	missense	c.638	p.F213Y	1.000	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
KIF4A	0	genome.wustl.edu	37	X	69510363	69510363	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	X	69510363	69510363	C	T	SNP	KIF4A	NM_012310.4	human	genbank	58_37c	+1	reviewed	silent	c.55	p.L19	0.999	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LOC728297	0	genome.wustl.edu	37	9	45362640	45362642	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	9	45362640	45362642	AGA	-	DEL	LOC728297	XM_001127111.2	human	genbank	58_37c	+1	model	in_frame_del	c.614_616	p.K206in_frame_del	1.000:1.000:1.000	HMMPfam_7tm_1	HMMPfam_7tm_1	-	no_errors
LSM1	0	genome.wustl.edu	37	8	38033806	38033806	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	8	38033806	38033806	G	A	SNP	LSM1	NM_014462.1	human	genbank	58_37c	-1	provisional	silent	c.33	p.I11	1.000	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins	-	no_errors
MAP3K1	0	genome.wustl.edu	37	5	56178577	56178577	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	5	56178577	56178577	G	T	SNP	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	nonsense	c.3550	p.E1184*	1.000	NULL	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MAPKBP1	0	genome.wustl.edu	37	15	42111445	42111445	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	15	42111445	42111445	C	T	SNP	MAPKBP1	NM_001128608.1	human	genbank	58_37c	+1	validated	missense	c.2311	p.H771Y	0.971	NULL	HMMSmart_SM00320,PatternScan_PTS_HPR_SER,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
MDM4	0	genome.wustl.edu	37	1	204507346	204507346	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	1	204507346	204507346	G	A	SNP	MDM4	NM_002393.3	human	genbank	58_37c	+1	validated	missense	c.421	p.E141K	0.105	NULL	PatternScan_ZF_RANBP2_1,HMMPfam_SWIB,superfamily_SWIB/MDM2 domain,superfamily_RING/U-box	-	no_errors
MED12	0	genome.wustl.edu	37	X	70356252	70356252	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	X	70356252	70356252	G	A	SNP	MED12	NM_005120.2	human	genbank	58_37c	+1	reviewed	missense	c.5147	p.R1716Q	0.420	NULL	HMMPfam_Med12	-	no_errors
MXRA5	0	genome.wustl.edu	37	X	3235331	3235331	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	X	3235331	3235331	C	T	SNP	MXRA5	NM_015419.3	human	genbank	58_37c	-1	reviewed	missense	c.6391	p.A2131T	0.851	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
NASP	0	genome.wustl.edu	37	1	46073697	46073697	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	1	46073697	46073697	C	A	SNP	NASP	NM_172164.1	human	genbank	58_37c	+1	reviewed	missense	c.1120	p.P374T	0.000	superfamily_SSF48452	HMMPfam_TPR_1,HMMPfam_SHNi-TPR,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
NCOA2	0	genome.wustl.edu	37	8	71078828	71078828	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	8	71078828	71078828	G	T	SNP	NCOA2	NM_006540.2	human	genbank	58_37c	-1	validated	missense	c.703	p.P235T	1.000	NULL	HMMSmart_PAS,HMMSmart_HLH,HMMSmart_PAC,superfamily_Nuc_recept_coact,HMMPfam_DUF1518,superfamily_HLH_basic,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_SSF55785	-	no_errors
OR4F17	0	genome.wustl.edu	37	19	111016	111016	+	Missense_Mutation	SNP	T	T	G	rs71245814	byFrequency	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	19	111016	111016	T	G	SNP	OR4F17	NM_001005240.1	human	genbank	58_37c	+1	provisional	missense	c.338	p.F113C	0.999	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
POU3F2	0	genome.wustl.edu	37	6	99283256	99283256	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	6	99283256	99283256	G	C	SNP	POU3F2	NM_005604.2	human	genbank	58_37c	+1	validated	silent	c.507	p.R169	1.000	NULL	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,PatternScan_POU_2,HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains,PatternScan_HOMEOBOX_1	-	no_errors
SLC25A13	0	genome.wustl.edu	37	7	95822421	95822421	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	7	95822421	95822421	G	A	SNP	SLC25A13	NM_014251.2	human	genbank	58_37c	-1	reviewed	silent	c.543	p.I181	0.997	superfamily_SSF47473	superfamily_Mitoch_carrier,HMMSmart_EFh,HMMPfam_Mito_carr,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
TCERG1L	0	genome.wustl.edu	37	10	133058579	133058579	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	10	133058579	133058579	G	A	SNP	TCERG1L	NM_174937.3	human	genbank	58_37c	-1	validated	missense	c.799	p.R267C	0.718	NULL	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,HMMPfam_FF,HMMSmart_FF,superfamily_FF	-	no_errors
TMPO	0	genome.wustl.edu	37	12	98926744	98926744	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	12	98926744	98926744	G	A	SNP	TMPO	NM_003276.2	human	genbank	58_37c	+1	reviewed	missense	c.709	p.E237K	1.000	NULL	HMMPfam_LEM,HMMSmart_SM00540,superfamily_LEM domain,HMMPfam_Thymopoietin	-	no_errors
TRIM64B	0	genome.wustl.edu	37	11	89607385	89607385	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	11	89607385	89607385	G	C	SNP	TRIM64B	ENST00000329862	human	ensembl	58_37c	-1	known	silent	c.567	p.L189	0.002	NULL	HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,HMMPfam_SPRY,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
TXNRD1	0	genome.wustl.edu	37	12	104682625	104682625	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	12	104682625	104682625	G	A	SNP	TXNRD1	ENST00000378070	human	ensembl	58_37c	+1	known	missense	c.68	p.R23Q	0.346	NULL	HMMPfam_Pyr_redox_dim,PatternScan_PYRIDINE_REDOX_1,HMMPfam_Pyr_redox_2,superfamily_FAD/NAD-linked reductases dimerisation (C-terminal) domain,superfamily_FAD/NAD(P)-binding domain	-	no_errors
YWHAG	0	genome.wustl.edu	37	7	75959501	75959501	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	7	75959501	75959501	G	C	SNP	YWHAG	NM_012479.3	human	genbank	58_37c	-1	reviewed	missense	c.137	p.S46C	0.998	HMMPfam_14-3-3,HMMSmart_SM00101,PatternScan_1433_1,superfamily_14-3-3 protein	HMMPfam_14-3-3,HMMSmart_SM00101,PatternScan_1433_1,PatternScan_1433_2,superfamily_14-3-3 protein	-	no_errors
ZNF35	0	genome.wustl.edu	37	3	44701222	44701222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1N4-01A-11D-A14K-09	TCGA-E9-A1N4-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a3784a48-47a7-4587-91dd-5b8873a24ca9	a7a3cf1b-eb9b-468a-b613-55bb99265df8	3	44701222	44701222	C	T	SNP	ZNF35	NM_003420.3	human	genbank	58_37c	+1	validated	missense	c.1367	p.T456I	0.798	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
