Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AKD1	0	genome.wustl.edu	37	6	109850199	109850201	+	In_Frame_Del	DEL	AAC	AAC	-	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	AAC	AAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	6	109850199	109850201	AAC	-	DEL	AKD1	ENST00000355283	human	ensembl	58_37c	-1	known	in_frame_del	c.885_883	p.V295in_frame_del	0.003:0.000:0.000	NULL	HMMPfam_ADK,HMMPfam_YHS,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ALMS1	0	genome.wustl.edu	37	2	73653617	73653617	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	2	73653617	73653617	C	A	SNP	ALMS1	NM_015120.4	human	genbank	58_37c	+1	reviewed	missense	c.1274	p.T425N	0.002	NULL	NULL	-	no_errors
C6orf182	0	genome.wustl.edu	37	6	109483990	109483990	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	6	109483990	109483990	G	T	SNP	C6orf182	NM_001083535.1	human	genbank	58_37c	+1	validated	missense	c.1200	p.M400I	0.912	NULL	HMMPfam_DUF1167	-	no_errors
CABP2	0	genome.wustl.edu	37	11	67290059	67290060	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	11	67290059	67290060	-	G	INS	CABP2	NM_016366.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.171_170	p.A58fs	0.022:0.996	superfamily_EF-hand	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
CBX1	0	genome.wustl.edu	37	17	46148872	46148872	+	Silent	SNP	T	T	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	17	46148872	46148872	T	A	SNP	CBX1	NM_001127228.1	human	genbank	58_37c	-1	reviewed	silent	c.483	p.I161	1.000	HMMSmart_SM00298,HMMPfam_Chromo_shadow,superfamily_Chromo domain-like,HMMSmart_SM00300	HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Chromo_shadow,superfamily_Chromo domain-like,HMMSmart_SM00300	-	no_errors
CELSR1	0	genome.wustl.edu	37	22	46932208	46932208	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	22	46932208	46932208	A	G	SNP	CELSR1	NM_014246.1	human	genbank	58_37c	-1	reviewed	missense	c.860	p.L287P	0.999	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00282,HMMPfam_HRM,HMMSmart_SM00008,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
COL6A5	0	genome.wustl.edu	37	3	130095411	130095411	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	3	130095411	130095411	G	A	SNP	COL6A5	NM_153264.5	human	genbank	58_37c	+1	validated	silent	c.399	p.Q133	0.293	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Collagen,superfamily_SSF53300	-	no_errors
DCTN1	0	genome.wustl.edu	37	2	74595859	74595859	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	2	74595859	74595859	C	T	SNP	DCTN1	NM_004082.3	human	genbank	58_37c	-1	reviewed	missense	c.1850	p.C617Y	1.000	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Spectrin repeat,superfamily_Cap-Gly domain	-	no_errors
DHPS	0	genome.wustl.edu	37	19	12788175	12788175	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	19	12788175	12788175	G	A	SNP	DHPS	NM_001930.2	human	genbank	58_37c	-1	reviewed	silent	c.714	p.D238	0.463	HMMPfam_DS,superfamily_DHS-like NAD/FAD-binding domain	HMMPfam_DS,superfamily_DHS-like NAD/FAD-binding domain	-	no_errors
ECEL1	0	genome.wustl.edu	37	2	233350770	233350771	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	2	233350770	233350771	-	A	INS	ECEL1	NM_004826.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.594_593	p.R199fs	0.458:0.998	"HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Peptidase_M13_N,HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ENSG00000232657	0	genome.wustl.edu	37	4	49110189	49110193	+	Frame_Shift_Del	DEL	CATTT	CATTT	-	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	CATTT	CATTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	4	49110189	49110193	CATTT	-	DEL	ENSG00000232657	ENST00000417204	human	ensembl	58_37c	-1	known	frame_shift_del	c.90_86	p.E29fs	0.000:0.000:0.000:0.000:0.000	NULL	NULL	-	no_stop_codon
FAM157C	0	genome.wustl.edu	37	16	90168699	90168700	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	16	90168699	90168700	CA	-	DEL	FAM157C	XM_001714162.2	human	genbank	58_37c	+1	model	frame_shift_del	c.220_221	p.Q74fs	0.022:0.021	NULL	NULL	-	no_errors
FAT3	0	genome.wustl.edu	37	11	92507304	92507304	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	11	92507304	92507304	G	C	SNP	FAT3	NM_001008781.2	human	genbank	58_37c	+1	validated	missense	c.4293	p.M1431I	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29623251	29623252	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	20	29623251	29623252	-	A	INS	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	frame_shift_ins	c.63_64	p.S24fs	1.000:1.000	superfamily_Actin_crosslink,HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
GOLGA3	0	genome.wustl.edu	37	12	133351864	133351864	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	12	133351864	133351864	G	C	SNP	GOLGA3	NM_005895.3	human	genbank	58_37c	-1	reviewed	missense	c.4006	p.Q1336E	0.984	NULL	superfamily_Prefoldin,superfamily_Spectrin repeat	-	no_errors
HGC6.3	0	genome.wustl.edu	37	6	168376880	168376881	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	6	168376880	168376881	-	G	INS	HGC6.3	NM_001129895.1	human	genbank	58_37c	-1	predicted	frame_shift_ins	c.453_452	p.Q151fs	0.600:0.584	NULL	NULL	-	no_errors
HTR2C	0	genome.wustl.edu	37	X	114141530	114141530	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	X	114141530	114141530	C	T	SNP	HTR2C	NM_000868.2	human	genbank	58_37c	+1	reviewed	missense	c.929	p.S310L	0.994	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
LOC149501	0	genome.wustl.edu	37	1	157043172	157043173	+	RNA	INS	-	-	GCA	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	1	157043172	157043173	-	GCA	INS	LOC149501	XR_017100.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.993:0.996	-	-	-	pseudogene
LOC283685	0	genome.wustl.edu	37	15	23686010	23686011	+	In_Frame_Ins	INS	-	-	CTC	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	15	23686010	23686011	-	CTC	INS	LOC283685	XM_002343322.1	human	genbank	58_37c	-1	model	in_frame_ins	c.1438_1437	p.479in_frame_insE	0.002:0.005	NULL	NULL	-	no_errors
LOC441666	0	genome.wustl.edu	37	10	42833686	42833686	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	10	42833686	42833686	C	T	SNP	LOC441666	NR_024380.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.388	-	-	-	pseudogene
LOC642236	0	genome.wustl.edu	37	9	68438558	68438560	+	RNA	DEL	CTT	CTT	-	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	9	68438558	68438560	CTT	-	DEL	LOC642236	XR_041085.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors
LOC646214	0	genome.wustl.edu	37	15	21937977	21937977	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	15	21937977	21937977	C	T	SNP	LOC646214	NR_027053.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.003	-	-	-	pseudogene
MEPE	0	genome.wustl.edu	37	4	88767390	88767390	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	4	88767390	88767390	C	T	SNP	MEPE	NM_020203.3	human	genbank	58_37c	+1	validated	missense	c.1370	p.P457L	0.000	NULL	HMMPfam_Osteoregulin	-	no_errors
MSL1	0	genome.wustl.edu	37	17	38282588	38282588	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	17	38282588	38282588	G	A	SNP	MSL1	NM_001012241.1	human	genbank	58_37c	+1	validated	silent	c.132	p.E44	1.000	NULL	NULL	-	no_errors
OR7E87P	0	genome.wustl.edu	37	11	71304933	71304935	+	In_Frame_Del	DEL	TCG	TCG	-	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	TCG	TCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	11	71304933	71304935	TCG	-	DEL	OR7E87P	ENST00000329336	human	ensembl	58_37c	+1	known	in_frame_del	c.506_508	p.V170in_frame_del	0.023:0.028:0.021	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,superfamily_SSF81321	-	no_errors
PCDHB11	0	genome.wustl.edu	37	5	140580709	140580709	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	5	140580709	140580709	C	T	SNP	PCDHB11	NM_018931.2	human	genbank	58_37c	+1	reviewed	silent	c.1362	p.T454	0.000	superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178948044	178948044	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	3	178948044	178948044	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.2816	p.D939G	1.000	HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PKHD1L1	0	genome.wustl.edu	37	8	110412471	110412471	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	8	110412471	110412471	T	A	SNP	PKHD1L1	NM_177531.4	human	genbank	58_37c	+1	validated	missense	c.1179	p.S393R	1.000	HMMSmart_SM00758,superfamily_Anthrax protective antigen	HMMPfam_TIG,HMMSmart_SM00429,HMMSmart_SM00710,superfamily_Cupredoxins,superfamily_Pectin lyase-like,HMMSmart_SM00758,superfamily_E set domains,HMMPfam_G8,superfamily_Anthrax protective antigen	-	no_errors
PLCZ1	0	genome.wustl.edu	37	12	18837138	18837138	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	12	18837138	18837138	A	G	SNP	PLCZ1	NM_033123.2	human	genbank	58_37c	-1	provisional	missense	c.1667	p.V556A	0.998	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,superfamily_EF-hand	-	no_errors
PPFIBP1	0	genome.wustl.edu	37	12	27832871	27832871	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	12	27832871	27832871	G	C	SNP	PPFIBP1	NM_003622.2	human	genbank	58_37c	+1	reviewed	missense	c.1772	p.R591T	0.997	NULL	HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_Integrase_DNA,superfamily_SAM_homology,HMMPfam_SAM_2	-	no_errors
RAP2C	0	genome.wustl.edu	37	X	131348321	131348321	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	X	131348321	131348321	T	C	SNP	RAP2C	NM_021183.3	human	genbank	58_37c	-1	provisional	missense	c.427	p.M143V	1.000	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TNFRSF19	0	genome.wustl.edu	37	13	24242970	24242970	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	13	24242970	24242970	C	A	SNP	TNFRSF19	NM_018647.2	human	genbank	58_37c	+1	reviewed	missense	c.979	p.P327T	0.057	NULL	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like	-	no_errors
TTN	0	genome.wustl.edu	37	2	179550299	179550299	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1P0-01A-11D-A142-09	TCGA-EW-A1P0-10A-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6475f4dd-782c-411a-b7ce-9c9ebd0753b8	b71deea6-58d2-42b0-89f6-8a195ffe6213	2	179550299	179550299	C	A	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.28606	p.V9536L	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
