Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC2	1244	genome.wustl.edu	37	10	101567986	101567986	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	101567986	101567986	G	C	SNP	ABCC2	NM_000392.3	human	genbank	58_37c	+1	reviewed	missense	c.1815	p.Q605H	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ATXN2L	11273	genome.wustl.edu	37	16	28844517	28844517	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	16	28844517	28844517	G	A	SNP	ATXN2L	NM_148414.1	human	genbank	58_37c	+1	reviewed	silent	c.1797	p.K599	1.000	NULL	HMMPfam_LsmAD,HMMPfam_PAM2	-	no_errors
BTAF1	9044	genome.wustl.edu	37	10	93768685	93768685	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	93768685	93768685	C	G	SNP	BTAF1	NM_003972.2	human	genbank	58_37c	+1	validated	missense	c.3913	p.L1305V	1.000	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_HEAT,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00487,superfamily_ARM repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
C21orf121	150142	genome.wustl.edu	37	21	43444542	43444542	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	21	43444542	43444542	G	A	SNP	C21orf121	NR_027273.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.001	-	-	-	no_errors
C21orf99	149992	genome.wustl.edu	37	21	14424652	14424652	+	RNA	SNP	G	A	A	rs3875769	byCluster;byFrequency;by2Hit2Allele;byHapmap	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	21	14424652	14424652	G	A	SNP	C21orf99	NR_026916.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.042	-	-	-	pseudogene
C2orf62	375307	genome.wustl.edu	37	2	219232206	219232206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	219232206	219232206	G	A	SNP	C2orf62	NM_198559.1	human	genbank	58_37c	+1	predicted	missense	c.886	p.D296N	0.993	NULL	NULL	-	no_errors
C6orf35	55836	genome.wustl.edu	37	6	157713934	157713934	+	Nonstop_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	157713934	157713934	C	G	SNP	C6orf35	NM_018452.4	human	genbank	58_37c	-1	validated	nonstop	c.425	p.*142S	1.000	NULL	HMMPfam_DUF1358	-	no_errors
CCNA2	890	genome.wustl.edu	37	4	122743651	122743651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	122743651	122743651	G	A	SNP	CCNA2	NM_001237.3	human	genbank	58_37c	-1	validated	missense	c.364	p.R122C	0.000	NULL	HMMPfam_Cyclin_C,HMMSmart_SM00385,HMMPfam_Cyclin_N,PatternScan_CYCLINS,superfamily_Cyclin-like	-	no_errors
CDC25B	994	genome.wustl.edu	37	20	3783790	3783790	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	20	3783790	3783790	C	G	SNP	CDC25B	NM_021873.2	human	genbank	58_37c	+1	reviewed	missense	c.1293	p.I431M	0.992	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase	HMMPfam_M-inducer_phosp,HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase	-	no_errors
CLTCL1	8218	genome.wustl.edu	37	22	19220950	19220950	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	22	19220950	19220950	C	A	SNP	CLTCL1	NM_007098.3	human	genbank	58_37c	-1	reviewed	missense	c.1363	p.D455Y	1.000	superfamily_ARM repeat	HMMPfam_Clathrin,HMMSmart_SM00299,HMMPfam_Clathrin_propel,superfamily_Clathrin heavy-chain terminal domain,HMMPfam_Clathrin-link,superfamily_ARM repeat	-	no_errors
COX19	90639	genome.wustl.edu	37	7	966263	966263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	7	966263	966263	C	T	SNP	COX19	ENST00000457254	human	ensembl	58_37c	-1	known	missense	c.343	p.E115K	0.996	NULL	HMMPfam_CHCH	-	no_errors
CR1	1378	genome.wustl.edu	37	1	207760857	207760857	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	207760857	207760857	C	G	SNP	CR1	NM_000651.4	human	genbank	58_37c	+1	reviewed	missense	c.5657	p.S1886C	1.000	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	-	no_errors
DOT1L	84444	genome.wustl.edu	37	19	2211749	2211749	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	19	2211749	2211749	G	T	SNP	DOT1L	NM_032482.2	human	genbank	58_37c	+1	validated	splice_site	c.1466-1	e16-1	1.000	-	-	-	no_errors
ENSG00000188014	0	genome.wustl.edu	37	4	113468473	113468473	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	113468473	113468473	C	A	SNP	C4orf21	ENST00000505019	human	ensembl	58_37c	-1	known	nonsense	c.5566	p.E1856*	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_zf-GRF,HMMPfam_DUF2439,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000245838	0	genome.wustl.edu	37	11	77524412	77524412	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	11	77524412	77524412	G	C	SNP	ENSG00000219529	ENST00000404439	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-77524412	NULL	1.000	-	-	-	no_coding_region:pseudogene
FAM75A2	642265	genome.wustl.edu	37	9	39887042	39887042	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	9	39887042	39887042	C	A	SNP	FAM75A2	NM_001040065.1	human	genbank	58_37c	+1	predicted	nonsense	c.284	p.S95*	0.000	NULL	NULL	-	no_errors
FLNA	2316	genome.wustl.edu	37	X	153580297	153580297	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	X	153580297	153580297	G	-	DEL	FLNA	NM_001110556.1	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.6862	p.R2288fs	1.000	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin	HMMSmart_SM00557,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_E set domains,superfamily_Calponin-homology domain CH-domain,HMMPfam_Filamin	-	no_errors
FSHR	2492	genome.wustl.edu	37	2	49295407	49295407	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	49295407	49295407	G	A	SNP	FSHR	NM_000145.3	human	genbank	58_37c	-1	reviewed	nonsense	c.175	p.R59*	1.000	superfamily_L domain-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GNB3	2784	genome.wustl.edu	37	12	6952186	6952186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	12	6952186	6952186	C	T	SNP	GNB3	NM_002075.2	human	genbank	58_37c	+1	reviewed	missense	c.149	p.T50M	1.000	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
GPR75	10936	genome.wustl.edu	37	2	54081234	54081234	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	54081234	54081234	G	C	SNP	GPR75	NM_006794.2	human	genbank	58_37c	-1	validated	silent	c.660	p.V220	0.977	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HNRNPCL1	343069	genome.wustl.edu	37	1	12907682	12907682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	12907682	12907682	C	T	SNP	HNRNPCL1	NM_001013631.1	human	genbank	58_37c	-1	validated	missense	c.461	p.R154Q	0.963	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
KDM4C	23081	genome.wustl.edu	37	9	6887970	6887970	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	9	6887970	6887970	A	T	SNP	KDM4C	NM_015061.3	human	genbank	58_37c	+1	reviewed	silent	c.690	p.P230	0.868	HMMSmart_SM00558,HMMPfam_JmjC	HMMSmart_SM00249,HMMSmart_SM00333,HMMSmart_SM00558,HMMPfam_JmjN,HMMSmart_SM00545,superfamily_FYVE/PHD zinc finger,HMMPfam_JmjC,superfamily_Tudor/PWWP/MBT	-	no_errors
LPIN3	64900	genome.wustl.edu	37	20	39974484	39974484	+	Missense_Mutation	SNP	C	C	T	rs140565889	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	20	39974484	39974484	C	T	SNP	LPIN3	NM_022896.1	human	genbank	58_37c	+1	validated	missense	c.41	p.T14M	0.997	HMMPfam_Lipin_N	HMMPfam_Lipin_N,HMMPfam_LNS2,HMMSmart_SM00775,superfamily_HAD-like	-	no_errors
MTA3	57504	genome.wustl.edu	37	2	42871362	42871362	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	42871362	42871362	C	T	SNP	MTA3	NM_020744.2	human	genbank	58_37c	+1	provisional	silent	c.477	p.D159	1.000	HMMPfam_ELM2	HMMPfam_GATA,HMMSmart_ZnF_GATA,HMMPfam_ELM2,HMMSmart_SANT,HMMPfam_BAH,HMMSmart_BAH,superfamily_Homeodomain_like,HMMPfam_Myb_DNA-binding	-	no_errors
MTSS1	9788	genome.wustl.edu	37	8	125575147	125575147	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	125575147	125575147	G	C	SNP	MTSS1	NM_014751.4	human	genbank	58_37c	-1	validated	missense	c.911	p.S304C	1.000	NULL	HMMPfam_WH2,HMMPfam_IMD	-	no_errors
NFKB1	4790	genome.wustl.edu	37	4	103522129	103522129	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	103522129	103522129	C	T	SNP	NFKB1	NM_003998.3	human	genbank	58_37c	+1	reviewed	missense	c.1715	p.S572F	0.997	HMMSmart_ANK,superfamily_ANK	PatternScan_REL_1,HMMPfam_Death,HMMSmart_DEATH,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_TIG,HMMSmart_IPT,superfamily_P53_like_DNA_bnd,superfamily_DEATH_like,HMMPfam_RHD,superfamily_Ig_E-set	-	no_errors
NR4A1	3164	genome.wustl.edu	37	12	52451198	52451198	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	12	52451198	52451198	G	A	SNP	NR4A1	NM_002135.3	human	genbank	58_37c	+1	reviewed	missense	c.1424	p.C475Y	1.000	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
OR5T2	219464	genome.wustl.edu	37	11	56000599	56000599	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	11	56000599	56000599	A	T	SNP	OR5T2	NM_001004746.1	human	genbank	58_37c	-1	provisional	silent	c.63	p.S21	0.002	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PBX1	5087	genome.wustl.edu	37	1	164815893	164815893	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	164815893	164815893	C	A	SNP	PBX1	NM_002585.2	human	genbank	58_37c	+1	validated	missense	c.1273	p.H425N	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_PBC,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
PCDHGC3	5098	genome.wustl.edu	37	5	140855927	140855927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	5	140855927	140855927	G	A	SNP	PCDHGC3	NM_002588.2	human	genbank	58_37c	+1	reviewed	missense	c.244	p.E82K	1.000	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDZRN3	23024	genome.wustl.edu	37	3	73453303	73453303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	73453303	73453303	C	T	SNP	PDZRN3	NM_015009.1	human	genbank	58_37c	-1	provisional	missense	c.1162	p.E388K	1.000	superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00184,superfamily_TRAF domain-like,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178921553	178921553	+	Missense_Mutation	SNP	T	T	A	rs121913284	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	178921553	178921553	T	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1035	p.N345K	1.000	HMMSmart_C2,HMMSmart_PI3K_C2,superfamily_C2_CaLB	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PLEKHA1	59338	genome.wustl.edu	37	10	124189401	124189401	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	10	124189401	124189401	G	C	SNP	PLEKHA1	NM_001001974.1	human	genbank	58_37c	+1	validated	missense	c.1162	p.D388H	0.169	NULL	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	-	no_errors
POLR2H	5437	genome.wustl.edu	37	3	184082777	184082777	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	184082777	184082777	G	A	SNP	POLR2H	NM_006232.2	human	genbank	58_37c	+1	reviewed	missense	c.97	p.E33K	1.000	HMMPfam_RNA_pol_Rpb8,HMMSmart_SM00658,superfamily_Nucleic acid-binding proteins	HMMPfam_RNA_pol_Rpb8,HMMSmart_SM00658,superfamily_Nucleic acid-binding proteins	-	no_errors
PSG1	5669	genome.wustl.edu	37	19	43376163	43376163	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	19	43376163	43376163	G	A	SNP	PSG1	NM_006905.2	human	genbank	58_37c	-1	validated	silent	c.465	p.N155	0.011	superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
PSMA3	5684	genome.wustl.edu	37	14	58724656	58724656	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	14	58724656	58724656	G	C	SNP	PSMA3	NM_002788.2	human	genbank	58_37c	+1	reviewed	missense	c.344	p.R115T	1.000	HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	HMMPfam_Proteasome_A_N,PatternScan_PROTEASOME_A,HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	-	no_errors
PTPRG	5793	genome.wustl.edu	37	3	61975361	61975361	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	3	61975361	61975361	C	G	SNP	PTPRG	NM_002841.3	human	genbank	58_37c	+1	reviewed	missense	c.253	p.P85A	1.000	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
PYGB	5834	genome.wustl.edu	37	20	25257355	25257355	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	20	25257355	25257355	G	-	DEL	PYGB	NM_002862.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.734	p.W245fs	1.000	HMMPfam_Phosphorylase,superfamily_SSF53756	HMMPfam_Phosphorylase,PatternScan_PHOSPHORYLASE,superfamily_SSF53756	-	no_errors
RHCE	6006	genome.wustl.edu	37	1	25688942	25688942	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	1	25688942	25688942	A	C	SNP	RHCE	ENST00000413854	human	ensembl	58_37c	-1	known	silent	c.816	p.R272	0.000	HMMPfam_Ammonium_transp	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	-	no_errors
RTN4R	65078	genome.wustl.edu	37	22	20230142	20230142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	22	20230142	20230142	C	T	SNP	RTN4R	NM_023004.5	human	genbank	58_37c	-1	reviewed	missense	c.514	p.D172N	0.952	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
RXFP1	59350	genome.wustl.edu	37	4	159547979	159547979	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	159547979	159547979	G	A	SNP	RXFP1	NM_021634.2	human	genbank	58_37c	+1	provisional	missense	c.763	p.E255K	1.000	HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	HMMPfam_7tm_1,HMMPfam_LRR_1,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like	-	no_errors
SCN9A	6335	genome.wustl.edu	37	2	167149874	167149874	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	167149874	167149874	G	-	DEL	SCN9A	NM_002977.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.974	p.P325fs	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SENP6	26054	genome.wustl.edu	37	6	76385620	76385620	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	76385620	76385620	C	G	SNP	SENP6	NM_015571.2	human	genbank	58_37c	+1	validated	missense	c.1471	p.L491V	1.000	NULL	HMMPfam_Peptidase_C48,superfamily_Cysteine proteinases	-	no_errors
SEPT14	346288	genome.wustl.edu	37	7	55910784	55910784	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	7	55910784	55910784	C	G	SNP	SEPT14	NM_207366.2	human	genbank	58_37c	-1	validated	missense	c.409	p.E137Q	1.000	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SLITRK5	26050	genome.wustl.edu	37	13	88329051	88329051	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	13	88329051	88329051	G	C	SNP	SLITRK5	NM_015567.1	human	genbank	58_37c	+1	validated	missense	c.1408	p.E470Q	1.000	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
SORL1	6653	genome.wustl.edu	37	11	121425982	121425982	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	11	121425982	121425982	C	T	SNP	SORL1	NM_003105.4	human	genbank	58_37c	+1	reviewed	silent	c.2526	p.L842	1.000	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_COPPER_BLUE,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00602,superfamily_Fibronectin type III,PatternScan_EGF_2,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase,superfamily_YWTD domain	-	no_errors
STAP1	26228	genome.wustl.edu	37	4	68459065	68459065	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	68459065	68459065	G	A	SNP	STAP1	NM_012108.2	human	genbank	58_37c	+1	reviewed	missense	c.817	p.E273K	0.932	superfamily_SH2 domain	HMMSmart_SM00252,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like,superfamily_SH2 domain	-	no_errors
STAU2	27067	genome.wustl.edu	37	8	74526082	74526082	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	74526082	74526082	C	T	SNP	STAU2	NM_014393.2	human	genbank	58_37c	-1	reviewed	missense	c.692	p.R231H	0.997	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	-	no_errors
SUZ12	23512	genome.wustl.edu	37	17	30315462	30315462	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	17	30315462	30315462	G	A	SNP	SUZ12	NM_015355.2	human	genbank	58_37c	+1	reviewed	missense	c.1147	p.E383K	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,HMMPfam_VEFS-Box	-	no_errors
SYNE1	23345	genome.wustl.edu	37	6	152563452	152563452	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	6	152563452	152563452	G	T	SNP	SYNE1	NM_182961.2	human	genbank	58_37c	-1	reviewed	missense	c.19816	p.Q6606K	0.000	superfamily_Spectrin repeat	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMPfam_KASH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors
TBC1D8B	54885	genome.wustl.edu	37	X	106066621	106066621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	X	106066621	106066621	C	T	SNP	TBC1D8B	NM_017752.2	human	genbank	58_37c	+1	validated	missense	c.752	p.A251V	1.000	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_GRAM,HMMSmart_SM00568,PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
TJP1	7082	genome.wustl.edu	37	15	30001020	30001020	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	15	30001020	30001020	T	C	SNP	TJP1	NM_003257.3	human	genbank	58_37c	-1	validated	silent	c.4593	p.P1531	0.315	NULL	HMMPfam_ZU5,HMMSmart_SM00218,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,HMMPfam_SH3_2,HMMPfam_Gua_kin_assoc_C,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577105	7577105	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	17	7577105	7577105	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.833	p.P278L	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TPM2	7169	genome.wustl.edu	37	9	35682764	35682765	+	Frame_Shift_Ins	INS	-	-	G	rs138163723	byCluster;by1000genomes	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	9	35682764	35682765	-	G	INS	TPM2	ENST00000378300	human	ensembl	58_37c	-1	known	frame_shift_ins	c.910_909	p.W303fs	0.001:0.004	NULL	HMMPfam_Tropomyosin,PatternScan_TROPOMYOSIN	-	no_errors
TRPV2	51393	genome.wustl.edu	37	17	16335539	16335539	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	17	16335539	16335539	C	G	SNP	TRPV2	NM_016113.3	human	genbank	58_37c	+1	reviewed	silent	c.1914	p.L638	1.000	HMMPfam_Ion_trans	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_Ion_trans	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179445267	179445267	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	2	179445267	179445267	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.59129	p.R19710K	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
USP25	29761	genome.wustl.edu	37	21	17177479	17177479	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	21	17177479	17177479	C	G	SNP	USP25	NM_013396.3	human	genbank	58_37c	+1	validated	missense	c.682	p.L228V	1.000	HMMPfam_UCH,superfamily_Cysteine proteinases	HMMPfam_UCH,HMMPfam_UIM,HMMSmart_SM00726,superfamily_UBA-like,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
VAMP7	6845	genome.wustl.edu	37	X	155130211	155130211	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	X	155130211	155130211	C	T	SNP	VAMP7	NM_005638.4	human	genbank	58_37c	+1	validated	silent	c.393	p.A131	1.000	HMMPfam_Synaptobrevin	HMMPfam_Synaptobrevin,PatternScan_SYNAPTOBREVIN,superfamily_SNARE-like	-	no_errors
WDFY3	23001	genome.wustl.edu	37	4	85617213	85617213	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	4	85617213	85617213	C	T	SNP	WDFY3	NM_014991.4	human	genbank	58_37c	-1	reviewed	silent	c.8811	p.E2937	1.000	HMMPfam_Beach,superfamily_BEACH domain,superfamily_WD40 repeat-like	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_Concanavalin A-like lectins/glucanases,superfamily_FYVE/PHD zinc finger,superfamily_Cyclin-like,superfamily_WD40 repeat-like,superfamily_ARM repeat,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
ZCWPW1	55063	genome.wustl.edu	37	7	100014811	100014811	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	7	100014811	100014811	C	T	SNP	ZCWPW1	ENST00000379559	human	ensembl	58_37c	-1	known	splice_site	c.362-2	e4-2	0.918	-	-	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77616868	77616868	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	77616868	77616868	C	T	SNP	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	missense	c.545	p.S182F	0.998	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77776717	77776717	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	8	77776717	77776717	T	A	SNP	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	missense	c.10632	p.D3544E	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF532	55205	genome.wustl.edu	37	18	56587811	56587811	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0YH-01A-11D-A10G-09	TCGA-A2-A0YH-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5558a39-eab2-4216-ba88-b63c2de48b01	b5036146-9005-41b6-ad70-1906a7c6c8c7	18	56587811	56587811	G	-	DEL	ZNF532	NM_018181.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.2292	p.D765fs	1.000	HMMSmart_ZnF_C2H2	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
