Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ARHGAP11A	9824	genome.wustl.edu	37	15	32929250	32929250	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	15	32929250	32929250	C	A	SNP	ARHGAP11A	NM_014783.3	human	genbank	58_37c	+1	validated	missense	c.2276	p.A759D	0.007	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
ARMC5	79798	genome.wustl.edu	37	16	31474228	31474228	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	16	31474228	31474228	C	T	SNP	ARMC5	NM_001105247.1	human	genbank	58_37c	+1	validated	missense	c.1360	p.R454W	0.991	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
ASTN2	23245	genome.wustl.edu	37	9	119188282	119188282	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	9	119188282	119188282	C	T	SNP	ASTN2	NM_198187.3	human	genbank	58_37c	-1	reviewed	missense	c.3868	p.V1290M	0.996	NULL	HMMSmart_SM00457,HMMPfam_fn3,superfamily_Fibronectin type III,superfamily_EGF/Laminin	-	no_errors
BTBD6	90135	genome.wustl.edu	37	14	105716214	105716214	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	14	105716214	105716214	C	T	SNP	BTBD6	NM_033271.2	human	genbank	58_37c	+1	validated	silent	c.438	p.S146	0.003	NULL	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_PHR,HMMPfam_BTB	-	no_errors
C1orf185	284546	genome.wustl.edu	37	1	51584393	51584393	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	1	51584393	51584393	C	T	SNP	C1orf185	NM_001136508.1	human	genbank	58_37c	+1	predicted	missense	c.178	p.P60S	0.133	NULL	NULL	-	no_errors
CFHR3	10878	genome.wustl.edu	37	1	196757392	196757392	+	Silent	SNP	C	C	T	rs61735322	byFrequency	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	1	196757392	196757392	C	T	SNP	CFHR3	NM_021023.5	human	genbank	58_37c	+1	reviewed	silent	c.477	p.S159	0.026	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	-	no_errors
COL1A1	1277	genome.wustl.edu	37	17	48267939	48267939	+	Missense_Mutation	SNP	C	C	T	rs67879854	byCluster	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	48267939	48267939	C	T	SNP	COL1A1	NM_000088.3	human	genbank	58_37c	-1	reviewed	missense	c.2362	p.G788S	1.000	HMMPfam_Collagen	HMMPfam_COLFI,HMMSmart_SM00038,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_Collagen	-	no_errors
DAZAP1	26528	genome.wustl.edu	37	19	1418354	1418354	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	1418354	1418354	G	T	SNP	DAZAP1	NM_018959.2	human	genbank	58_37c	+1	reviewed	silent	c.222	p.T74	0.140	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
DHX32	55760	genome.wustl.edu	37	10	127530353	127530353	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	10	127530353	127530353	T	G	SNP	DHX32	NM_018180.2	human	genbank	58_37c	-1	reviewed	missense	c.1502	p.D501A	1.000	HMMPfam_HA2,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_HA2,HMMPfam_DUF1605,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DULLARD	23399	genome.wustl.edu	37	17	7154582	7154582	+	Missense_Mutation	SNP	T	C	C	rs3744399	byCluster;byFrequency;by1000genomes	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	7154582	7154582	T	C	SNP	DULLARD	NM_001143775.1	human	genbank	58_37c	-1	validated	missense	c.34	p.T12A	1.000	NULL	HMMPfam_NIF,HMMSmart_SM00577,superfamily_HAD-like	-	no_errors
EIF5	1983	genome.wustl.edu	37	14	103802230	103802230	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	14	103802230	103802230	C	G	SNP	EIF5	NM_001969.3	human	genbank	58_37c	+1	validated	missense	c.33	p.D11E	1.000	HMMPfam_eIF-5_eIF-2B,superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain	HMMPfam_eIF-5_eIF-2B,HMMSmart_SM00653,HMMPfam_W2,HMMSmart_SM00515,superfamily_ARM repeat,superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain,superfamily_Zinc-binding domain of translation initiation factor 2 beta	-	no_errors
EMR2	30817	genome.wustl.edu	37	19	14866468	14866468	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	14866468	14866468	G	A	SNP	EMR2	NM_013447.2	human	genbank	58_37c	-1	reviewed	missense	c.1414	p.R472C	0.047	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_G_PROTEIN_RECEP_F2_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
ENSG00000220161	0	genome.wustl.edu	37	17	18315107	18315108	+	Frame_Shift_Ins	INS	-	-	CT	rs78560884	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	18315107	18315108	-	CT	INS	ENSG00000220161	ENST00000407600	human	ensembl	58_37c	+1	known	frame_shift_ins	c.258_259	p.T87fs	0.946:0.948	NULL	NULL	-	no_errors
ENSG00000247772	0	genome.wustl.edu	37	11	47377894	47377895	+	RNA	DEL	CA	CA	-	rs141558426	byCluster;by1000genomes	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	11	47377894	47377895	CA	-	DEL	SPI1	NM_001080547.1	human	genbank	58_37c	-1	reviewed	intronic	c.497-798_497-797	e5-797	0.007:0.007	-	-	-	no_errors
ERVWE1	30816	genome.wustl.edu	37	7	92098206	92098206	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	7	92098206	92098206	A	T	SNP	ERVWE1	NM_014590.3	human	genbank	58_37c	-1	reviewed	missense	c.1490	p.I497N	0.371	NULL	HMMPfam_TLV_coat	-	no_errors
FAM133A	286499	genome.wustl.edu	37	X	92964617	92964617	+	Missense_Mutation	SNP	G	G	A	rs34123774	byCluster;byFrequency;by1000genomes	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	92964617	92964617	G	A	SNP	FAM133A	NM_173698.2	human	genbank	58_37c	+1	validated	missense	c.199	p.E67K	0.792	NULL	NULL	-	no_errors
FLII	2314	genome.wustl.edu	37	17	18149307	18149307	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	18149307	18149307	C	T	SNP	FLII	NM_002018.2	human	genbank	58_37c	-1	reviewed	missense	c.3337	p.E1113K	1.000	HMMSmart_GEL,HMMPfam_Gelsolin,superfamily_SSF55753	HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_GEL,HMMPfam_Gelsolin,superfamily_SSF52047,superfamily_SSF52058,superfamily_SSF55753	-	no_errors
FXYD8	0	genome.wustl.edu	37	X	73094954	73094954	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	73094954	73094954	G	T	SNP	FXYD8	ENST00000495569	human	ensembl	58_37c	+1	known	3_prime_untranslated_region	c.*73094954	NULL	0.106	-	-	-	no_coding_region:pseudogene
GLYR1	84656	genome.wustl.edu	37	16	4862120	4862122	+	In_Frame_Del	DEL	AGC	AGC	-	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	AGC	AGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	16	4862120	4862122	AGC	-	DEL	GLYR1	NM_032569.3	human	genbank	58_37c	-1	validated	in_frame_del	c.1249_1247	p.C416in_frame_del	1.000:1.000:1.000	HMMPfam_NAD_binding_2,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_NAD_binding_2,superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_AT_hook,superfamily_Tudor/PWWP/MBT	-	no_errors
IRAK1	3654	genome.wustl.edu	37	X	153284685	153284685	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	153284685	153284685	C	A	SNP	IRAK1	NM_001569.3	human	genbank	58_37c	-1	reviewed	silent	c.399	p.R133	0.037	NULL	HMMPfam_Death,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),superfamily_DEATH domain,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
LATS1	9113	genome.wustl.edu	37	6	150001395	150001395	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	6	150001395	150001395	G	A	SNP	LATS1	NM_004690.2	human	genbank	58_37c	-1	reviewed	nonsense	c.2209	p.R737*	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_UBA,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_UBA-like,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
MLLT10	8028	genome.wustl.edu	37	10	21959565	21959565	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	10	21959565	21959565	G	A	SNP	MLLT10	NM_004641.2	human	genbank	58_37c	+1	validated	missense	c.983	p.R328K	1.000	NULL	HMMSmart_PHD,superfamily_FYVE_PHD_ZnF,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
NKTR	4820	genome.wustl.edu	37	3	42659115	42659115	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	3	42659115	42659115	A	G	SNP	NKTR	NM_005385.3	human	genbank	58_37c	+1	reviewed	missense	c.112	p.N38D	1.000	HMMPfam_Pro_isomerase,superfamily_CSA_PPIase	HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1,superfamily_CSA_PPIase	-	no_errors
OR2T2	401992	genome.wustl.edu	37	1	248616513	248616513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	1	248616513	248616513	C	T	SNP	OR2T2	NM_001004136.1	human	genbank	58_37c	+1	provisional	missense	c.415	p.R139C	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PCDH7	5099	genome.wustl.edu	37	4	30725334	30725334	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	4	30725334	30725334	G	T	SNP	PCDH7	NM_032457.3	human	genbank	58_37c	+1	reviewed	missense	c.2149	p.A717S	1.000	HMMPfam_Cadherin,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin	-	no_errors
PITPNM1	9600	genome.wustl.edu	37	11	67269453	67269453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	11	67269453	67269453	C	T	SNP	PITPNM1	NM_004910.2	human	genbank	58_37c	-1	validated	missense	c.520	p.D174N	1.000	HMMPfam_IP_trans,superfamily_Bet v1-like	HMMPfam_IP_trans,HMMPfam_DDHD,HMMPfam_LNS2,HMMSmart_SM00775,superfamily_Bet v1-like,superfamily_HAD-like	-	no_errors
PJA1	64219	genome.wustl.edu	37	X	68382547	68382547	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	X	68382547	68382547	G	A	SNP	PJA1	NM_145119.3	human	genbank	58_37c	-1	reviewed	nonsense	c.535	p.R179*	0.001	NULL	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
PLXNA4	91584	genome.wustl.edu	37	7	131908302	131908302	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	7	131908302	131908302	C	T	SNP	PLXNA4	NM_020911.1	human	genbank	58_37c	-1	validated	missense	c.2081	p.R694Q	1.000	HMMPfam_PSI,HMMSmart_SM00423	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_SM00429,HMMSmart_SM00423,superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl,superfamily_E set domains,superfamily_Plexin repeat	-	no_errors
PLXND1	23129	genome.wustl.edu	37	3	129289712	129289712	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	3	129289712	129289712	C	T	SNP	PLXND1	NM_015103.2	human	genbank	58_37c	-1	validated	missense	c.3667	p.D1223N	0.998	superfamily_E set domains	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_SM00429,HMMSmart_SM00423,superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl,superfamily_E set domains,superfamily_Plexin repeat	-	no_errors
RASAL3	64926	genome.wustl.edu	37	19	15565621	15565621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	15565621	15565621	C	T	SNP	RASAL3	NM_022904.1	human	genbank	58_37c	-1	validated	missense	c.1805	p.R602Q	0.992	HMMPfam_RasGAP,HMMSmart_SM00323,superfamily_GTPase activation domain GAP	HMMPfam_C2,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	-	no_errors
RFX2	5990	genome.wustl.edu	37	19	6040046	6040046	+	Missense_Mutation	SNP	C	C	A	rs143838272	byFrequency	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	6040046	6040046	C	A	SNP	RFX2	NM_000635.3	human	genbank	58_37c	-1	reviewed	missense	c.467	p.G156V	0.975	HMMPfam_RFX1_trans_act	"HMMPfam_RFX_DNA_binding,HMMPfam_RFX1_trans_act,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
SDK1	221935	genome.wustl.edu	37	7	4008969	4008969	+	Missense_Mutation	SNP	G	G	A	rs140446821	byFrequency	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	7	4008969	4008969	G	A	SNP	SDK1	NM_152744.3	human	genbank	58_37c	+1	validated	missense	c.1627	p.V543I	0.039	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
SEMA4G	57715	genome.wustl.edu	37	10	102732993	102732993	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	10	102732993	102732993	T	G	SNP	SEMA4G	NM_017893.2	human	genbank	58_37c	+1	reviewed	missense	c.232	p.S78A	1.000	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMSmart_IG,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_SSF48726	-	no_errors
SGSM1	129049	genome.wustl.edu	37	22	25315810	25315810	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	22	25315810	25315810	G	A	SNP	SGSM1	NM_001039948.2	human	genbank	58_37c	+1	validated	missense	c.3208	p.V1070I	1.000	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_RUN,HMMSmart_SM00593	-	no_errors
SPRYD4	283377	genome.wustl.edu	37	12	56862936	56862936	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	12	56862936	56862936	A	C	SNP	SPRYD4	NM_207344.3	human	genbank	58_37c	+1	validated	missense	c.199	p.N67H	1.000	NULL	HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
STMN4	81551	genome.wustl.edu	37	8	27098633	27098633	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	8	27098633	27098633	G	A	SNP	STMN4	NM_030795.2	human	genbank	58_37c	-1	provisional	missense	c.337	p.R113W	1.000	HMMPfam_Stathmin,PatternScan_STATHMIN_1,superfamily_Stathmin	HMMPfam_Stathmin,PatternScan_STATHMIN_1,PatternScan_STATHMIN_2,superfamily_Stathmin	-	no_errors
SYT12	91683	genome.wustl.edu	37	11	66811295	66811295	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	11	66811295	66811295	G	T	SNP	SYT12	NM_177963.3	human	genbank	58_37c	+1	reviewed	missense	c.808	p.G270C	0.998	HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
TANC2	26115	genome.wustl.edu	37	17	61498828	61498828	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	17	61498828	61498828	A	G	SNP	TANC2	NM_025185.3	human	genbank	58_37c	+1	validated	missense	c.5485	p.T1829A	1.000	NULL	HMMPfam_TPR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00028,superfamily_TPR-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TBL3	10607	genome.wustl.edu	37	16	2027601	2027601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	16	2027601	2027601	G	A	SNP	TBL3	NM_006453.2	human	genbank	58_37c	+1	reviewed	missense	c.1829	p.G610E	1.000	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_Utp13,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TRIP10	9322	genome.wustl.edu	37	19	6750615	6750615	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	19	6750615	6750615	G	T	SNP	TRIP10	NM_004240.2	human	genbank	58_37c	+1	validated	missense	c.1460	p.G487V	1.000	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	HMMPfam_FCH,HMMSmart_SM00055,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
ZNF705G	100131980	genome.wustl.edu	37	8	7217792	7217792	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14O-01A-31D-A10Y-09	TCGA-E2-A14O-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6ab6f8d-0e65-40a3-bf98-7249e4075395	3315cbc2-91d3-407d-b030-0d20dc9f4aff	8	7217792	7217792	C	A	SNP	ZNF705G	ENST00000400156	human	ensembl	58_37c	-1	known	nonsense	c.202	p.E68*	0.514	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
