Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACY1	95	genome.wustl.edu	37	3	52019910	52019910	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	52019910	52019910	G	C	SNP	ACY1	NM_000666.1	human	genbank	58_37c	+1	reviewed	missense	c.307	p.E103Q	0.543	HMMPfam_Peptidase_M20,superfamily_SSF53187	PatternScan_ARGE_DAPE_CPG2_1,PatternScan_ARGE_DAPE_CPG2_2,HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Peptidase_M20_dimer,superfamily_SSF53187	-	no_errors
AMPD1	270	genome.wustl.edu	37	1	115226908	115226908	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	1	115226908	115226908	C	G	SNP	AMPD1	NM_000036.2	human	genbank	58_37c	-1	reviewed	missense	c.459	p.K153N	0.999	NULL	HMMPfam_A_deaminase,PatternScan_A_DEAMINASE,superfamily_SSF51556	-	no_errors
ANKRD31	256006	genome.wustl.edu	37	5	74364415	74364415	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	74364415	74364415	C	T	SNP	ANKRD31	ENST00000274361	human	ensembl	58_37c	-1	known	missense	c.5551	p.E1851K	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
ARFGEF1	10565	genome.wustl.edu	37	8	68178346	68178346	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	8	68178346	68178346	G	A	SNP	ARFGEF1	NM_006421.3	human	genbank	58_37c	-1	reviewed	missense	c.2018	p.S673L	1.000	superfamily_ARM-type_fold	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMPfam_DUF1981,superfamily_ARM-type_fold	-	no_errors
ATP10B	23120	genome.wustl.edu	37	5	160059363	160059363	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	160059363	160059363	C	G	SNP	ATP10B	NM_025153.2	human	genbank	58_37c	-1	validated	missense	c.1393	p.E465Q	1.000	superfamily_HAD-like	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
CARD6	84674	genome.wustl.edu	37	5	40843622	40843622	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	40843622	40843622	G	C	SNP	CARD6	NM_032587.3	human	genbank	58_37c	+1	reviewed	missense	c.652	p.V218L	0.001	NULL	HMMPfam_CARD,superfamily_DEATH_like	-	no_errors
CCNB3	85417	genome.wustl.edu	37	X	50089661	50089662	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	X	50089661	50089662	-	A	INS	CCNB3	NM_033031.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.3665_3666	p.P1223fs	0.933:0.937	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like	HMMPfam_Cyclin_C,HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like	-	no_errors
CCT8L2	150160	genome.wustl.edu	37	22	17072619	17072619	+	Silent	SNP	G	G	A	rs145079801	byFrequency	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	22	17072619	17072619	G	A	SNP	CCT8L2	NM_014406.4	human	genbank	58_37c	-1	validated	silent	c.822	p.S274	0.013	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like	-	no_errors
CD33	945	genome.wustl.edu	37	19	51738413	51738413	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	51738413	51738413	G	T	SNP	CD33	NM_001772.3	human	genbank	58_37c	+1	validated	silent	c.747	p.G249	0.008	NULL	HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
CIRBP	1153	genome.wustl.edu	37	19	1272339	1272339	+	Missense_Mutation	SNP	G	G	A	rs148277498	by1000genomes	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	1272339	1272339	G	A	SNP	CIRBP	ENST00000413636	human	ensembl	58_37c	+1	known	missense	c.689	p.R230H	0.000	NULL	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
CSF2RA	1438	genome.wustl.edu	37	X	1407467	1407467	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	X	1407467	1407467	T	A	SNP	CSF2RA	NM_006140.4	human	genbank	58_37c	+1	reviewed	missense	c.275	p.V92D	0.044	NULL	HMMPfam_Haemat_rec_S_F2,PatternScan_HEMATOPO_REC_S_F2,superfamily_Fibronectin type III	-	no_errors
CYP2C19	1557	genome.wustl.edu	37	10	96580363	96580363	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	10	96580363	96580363	C	A	SNP	CYP2C19	NM_000769.1	human	genbank	58_37c	+1	reviewed	silent	c.930	p.L310	0.001	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DDX41	51428	genome.wustl.edu	37	5	176943429	176943429	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	176943429	176943429	C	T	SNP	DDX41	NM_016222.2	human	genbank	58_37c	-1	reviewed	missense	c.158	p.R53Q	1.000	NULL	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_zf-CCHC,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DTX1	1840	genome.wustl.edu	37	12	113532664	113532664	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	12	113532664	113532664	T	A	SNP	DTX1	NM_004416.2	human	genbank	58_37c	+1	reviewed	missense	c.1298	p.V433E	1.000	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850	HMMSmart_RING,HMMPfam_WWE,PatternScan_ZF_RING_1,HMMSmart_WWE,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
ENSG00000222301	0	genome.wustl.edu	37	13	103472394	103472394	+	RNA	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	13	103472394	103472394	C	T	SNP	ENSG00000222301	ENST00000410369	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	0.011	-	-	-	no_errors
ENSG00000245306	0	genome.wustl.edu	37	3	20212139	20212139	+	RNA	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	20212139	20212139	C	T	SNP	SGOL1	ENST00000460637	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-20212139	NULL	0.001	-	-	-	no_coding_region
EPHA7	2045	genome.wustl.edu	37	6	94068126	94068126	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	6	94068126	94068126	C	A	SNP	EPHA7	NM_004440.3	human	genbank	58_37c	-1	reviewed	missense	c.836	p.C279F	1.000	superfamily_Growth factor receptor domain	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMPfam_SAM_1,HMMSmart_SM00454,HMMSmart_SM00220,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Galactose-binding domain-like,superfamily_Growth factor receptor domain,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),PatternScan_EGF_2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
F2RL2	2151	genome.wustl.edu	37	5	75914384	75914384	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	75914384	75914384	C	T	SNP	F2RL2	NM_004101.2	human	genbank	58_37c	-1	reviewed	missense	c.148	p.E50K	0.038	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
FRMPD4	9758	genome.wustl.edu	37	X	12736883	12736883	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	X	12736883	12736883	G	T	SNP	FRMPD4	NM_014728.3	human	genbank	58_37c	+1	reviewed	missense	c.3938	p.R1313L	1.000	NULL	PatternScan_WW_DOMAIN_1,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41	-	no_errors
GGT3P	2679	genome.wustl.edu	37	22	18769145	18769145	+	RNA	SNP	G	G	A	rs4532044	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	22	18769145	18769145	G	A	SNP	GGT3P	NR_003267.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.858	-	-	-	pseudogene
GMEB1	10691	genome.wustl.edu	37	1	29023445	29023445	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	1	29023445	29023445	G	A	SNP	GMEB1	NM_006582.2	human	genbank	58_37c	+1	reviewed	missense	c.477	p.M159I	1.000	HMMPfam_SAND,HMMSmart_SM00258,superfamily_SAND domain-like	HMMPfam_SAND,HMMSmart_SM00258,superfamily_SAND domain-like	-	no_errors
GPR98	84059	genome.wustl.edu	37	5	90024745	90024745	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	90024745	90024745	T	G	SNP	GPR98	NM_032119.3	human	genbank	58_37c	+1	reviewed	missense	c.10421	p.F3474C	0.111	NULL	HMMPfam_GPS,PatternScan_LIPOYL,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMPfam_EPTP,PatternScan_A_DEAMINASE,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
GRIK2	2898	genome.wustl.edu	37	6	102074363	102074363	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	6	102074363	102074363	A	C	SNP	GRIK2	NM_021956.4	human	genbank	58_37c	+1	reviewed	missense	c.392	p.Q131P	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
GSTA4	2941	genome.wustl.edu	37	6	52849324	52849324	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	6	52849324	52849324	G	A	SNP	GSTA4	NM_001512.3	human	genbank	58_37c	-1	reviewed	nonsense	c.352	p.Q118*	0.080	HMMPfam_GST_C,superfamily_Glutathione S-transferase (GST) C-terminal domain	HMMPfam_GST_N,HMMPfam_GST_C,superfamily_Glutathione S-transferase (GST) C-terminal domain,superfamily_Thioredoxin-like	-	no_errors
GUCY1B3	2983	genome.wustl.edu	37	4	156721140	156721140	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	4	156721140	156721140	C	T	SNP	GUCY1B3	NM_000857.2	human	genbank	58_37c	+1	validated	silent	c.1089	p.Y363	1.000	HMMPfam_HNOBA	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_HNOB,superfamily_H-NOX domain,HMMPfam_HNOBA,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
HAUS4	54930	genome.wustl.edu	37	14	23421871	23421871	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	14	23421871	23421871	G	A	SNP	HAUS4	NM_017815.2	human	genbank	58_37c	-1	reviewed	missense	c.77	p.P26L	1.000	NULL	NULL	-	no_errors
HOXA5	3202	genome.wustl.edu	37	7	27181585	27181585	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	7	27181585	27181585	T	C	SNP	HOXA5	NM_019102.2	human	genbank	58_37c	-1	reviewed	missense	c.682	p.I228V	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	HMMPfam_Homeobox,HMMSmart_SM00389,PatternScan_ANTENNAPEDIA,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
IL13RA2	3598	genome.wustl.edu	37	X	114244201	114244201	+	Silent	SNP	A	A	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	X	114244201	114244201	A	C	SNP	IL13RA2	NM_000640.2	human	genbank	58_37c	-1	reviewed	silent	c.735	p.T245	0.000	superfamily_FN_III-like	HMMPfam_Haemat_rec_S_F2,PatternScan_HEMATOPO_REC_S_F2,superfamily_FN_III-like	-	no_errors
IL17RD	54756	genome.wustl.edu	37	3	57132384	57132384	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	57132384	57132384	G	A	SNP	IL17RD	NM_017563.3	human	genbank	58_37c	-1	validated	silent	c.1347	p.L449	1.000	HMMPfam_SEFIR	HMMPfam_SEFIR	-	no_errors
ILF3	3609	genome.wustl.edu	37	19	10781755	10781755	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	10781755	10781755	C	G	SNP	ILF3	NM_017620.2	human	genbank	58_37c	+1	reviewed	missense	c.109	p.H37D	1.000	NULL	HMMPfam_dsrm,HMMSmart_SM00358,HMMPfam_DZF,HMMSmart_SM00572,superfamily_dsRNA-binding domain-like	-	no_errors
ITGAE	3682	genome.wustl.edu	37	17	3620003	3620003	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	17	3620003	3620003	C	T	SNP	ITGAE	NM_002208.4	human	genbank	58_37c	-1	reviewed	silent	c.3423	p.V1141	0.192	NULL	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_Int_alpha,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_SSF53300,superfamily_SSF69179,superfamily_SSF69318	-	no_errors
KIAA0564	23078	genome.wustl.edu	37	13	42149921	42149921	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	13	42149921	42149921	C	T	SNP	KIAA0564	NM_015058.1	human	genbank	58_37c	-1	validated	missense	c.5325	p.M1775I	0.000	HMMSmart_SM00327,superfamily_vWA-like	HMMSmart_SM00327,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_vWA-like	-	no_errors
KIRREL3	84623	genome.wustl.edu	37	11	126396533	126396533	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	11	126396533	126396533	C	T	SNP	KIRREL3	NM_032531.3	human	genbank	58_37c	-1	reviewed	silent	c.183	p.S61	0.003	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
LOC100132672	0	genome.wustl.edu	37	9	69501032	69501032	+	RNA	SNP	T	T	C	rs79662748	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	9	69501032	69501032	T	C	SNP	LOC100132672	XR_038504.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.960	-	-	-	pseudogene
LOC100289661	0	genome.wustl.edu	37	19	40704346	40704346	+	Missense_Mutation	SNP	C	C	T	rs142393148	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	40704346	40704346	C	T	SNP	LOC100289661	XM_002343682.1	human	genbank	58_37c	-1	model	missense	c.1735	p.E579K	0.968	NULL	NULL	-	no_errors
LOC440300	440300	genome.wustl.edu	37	15	84860930	84860930	+	RNA	SNP	G	G	A	rs4273011	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	15	84860930	84860930	G	A	SNP	LOC440300	XR_078504.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.981	-	-	-	pseudogene
MED25	81857	genome.wustl.edu	37	19	50322461	50322461	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	50322461	50322461	C	G	SNP	MED25	NM_030973.3	human	genbank	58_37c	+1	reviewed	missense	c.213	p.F71L	1.000	NULL	NULL	-	no_errors
MPP6	51678	genome.wustl.edu	37	7	24718895	24718895	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	7	24718895	24718895	T	C	SNP	MPP6	NM_016447.2	human	genbank	58_37c	+1	provisional	silent	c.1260	p.D420	1.000	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00569,HMMPfam_Guanylate_kin,HMMSmart_SM00072,HMMPfam_SH3_2,HMMPfam_L27,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MSH5	4439	genome.wustl.edu	37	6	31727737	31727737	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	6	31727737	31727737	G	A	SNP	MSH5	NM_025259.5	human	genbank	58_37c	+1	reviewed	missense	c.1721	p.R574Q	0.977	HMMPfam_MutS_V,HMMSmart_MUTSd,superfamily_SSF52540	HMMPfam_MutS_V,HMMSmart_MUTSac,PatternScan_DNA_MISMATCH_REPAIR_2,HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII,HMMPfam_MutS_IV,superfamily_SSF52540	-	no_errors
MTHFD1L	25902	genome.wustl.edu	37	6	151334924	151334924	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	6	151334924	151334924	G	A	SNP	MTHFD1L	NM_015440.3	human	genbank	58_37c	+1	validated	missense	c.2275	p.G759S	1.000	HMMPfam_FTHFS,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_FTHFS,PatternScan_FTHFS_1,PatternScan_FTHFS_2,HMMPfam_THF_DHG_CYH,HMMPfam_THF_DHG_CYH_C,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Aminoacid dehydrogenase-like N-terminal domain	-	no_errors
NBEA	26960	genome.wustl.edu	37	13	35517230	35517230	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	13	35517230	35517230	C	T	SNP	NBEA	NM_015678.4	human	genbank	58_37c	+1	validated	silent	c.273	p.I91	1.000	superfamily_ARM repeat	HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF1088,superfamily_WD40 repeat-like,superfamily_ARM repeat,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
NCOA5	57727	genome.wustl.edu	37	20	44692114	44692114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	20	44692114	44692114	G	A	SNP	NCOA5	NM_020967.2	human	genbank	58_37c	-1	reviewed	silent	c.1035	p.L345	1.000	NULL	superfamily_Anticodon-binding domain of Class II aaRS	-	no_errors
OR51Q1	390061	genome.wustl.edu	37	11	5444328	5444328	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	11	5444328	5444328	C	G	SNP	OR51Q1	NM_001004757.2	human	genbank	58_37c	+1	validated	missense	c.898	p.Q300E	1.000	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5R1	219479	genome.wustl.edu	37	11	56185676	56185676	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	11	56185676	56185676	T	C	SNP	OR5R1	NM_001004744.1	human	genbank	58_37c	-1	provisional	silent	c.33	p.V11	0.353	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDHB14	56122	genome.wustl.edu	37	5	140604455	140604455	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	140604455	140604455	G	A	SNP	PCDHB14	NM_018934.2	human	genbank	58_37c	+1	reviewed	missense	c.1378	p.V460I	0.000	HMMPfam_Cadherin,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PKD2L1	9033	genome.wustl.edu	37	10	102054793	102054793	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	10	102054793	102054793	C	T	SNP	PKD2L1	NM_016112.2	human	genbank	58_37c	-1	reviewed	missense	c.1444	p.V482I	0.495	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels	-	no_errors
PKNOX2	63876	genome.wustl.edu	37	11	125280153	125280153	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	11	125280153	125280153	T	C	SNP	PKNOX2	NM_022062.2	human	genbank	58_37c	+1	validated	missense	c.650	p.V217A	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
PRPF6	24148	genome.wustl.edu	37	20	62658961	62658961	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	20	62658961	62658961	G	A	SNP	PRPF6	NM_012469.3	human	genbank	58_37c	+1	reviewed	silent	c.2211	p.K737	1.000	HMMPfam_TPR_1,HMMSmart_HAT,superfamily_SSF48452	HMMPfam_TPR_1,HMMSmart_HAT,HMMPfam_PRP1_N,superfamily_SSF48452	-	no_errors
PSG6	5675	genome.wustl.edu	37	19	43411997	43411997	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	43411997	43411997	G	T	SNP	PSG6	NM_002782.3	human	genbank	58_37c	-1	provisional	missense	c.716	p.P239H	0.002	superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
PTEN	5728	genome.wustl.edu	37	10	89717727	89717737	+	Frame_Shift_Del	DEL	GTGATATCAAA	GTGATATCAAA	-	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	GTGATATCAAA	GTGATATCAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	10	89717727	89717737	GTGATATCAAA	-	DEL	PTEN	ENST00000371953	human	ensembl	58_37c	+1	known	frame_shift_del	c.752_762	p.D252fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2	HMMPfam_DSPc,HMMSmart_SM00404,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RASA2	5922	genome.wustl.edu	37	3	141277776	141277776	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	141277776	141277776	G	T	SNP	RASA2	NM_006506.2	human	genbank	58_37c	+1	reviewed	nonsense	c.733	p.E245*	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,HMMPfam_BTK,HMMSmart_BTK,HMMPfam_PH,HMMSmart_PH,HMMPfam_RasGAP,HMMSmart_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_Rho_GAP,superfamily_C2_CaLB,superfamily_SSF50729	-	no_errors
RBM6	10180	genome.wustl.edu	37	3	50005657	50005657	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	50005657	50005657	C	A	SNP	RBM6	NM_005777.2	human	genbank	58_37c	+1	validated	missense	c.799	p.Q267K	1.000	NULL	HMMPfam_G-patch,HMMSmart_G_patch,HMMSmart_RRM,HMMSmart_ZnF_C2H2,superfamily_SSF54928	-	no_errors
ROM1	6094	genome.wustl.edu	37	11	62381062	62381062	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	11	62381062	62381062	G	T	SNP	ROM1	NM_000327.3	human	genbank	58_37c	+1	reviewed	silent	c.309	p.L103	0.931	NULL	superfamily_Tetraspanin,PatternScan_RDS_ROM1,HMMPfam_Tetraspannin	-	no_errors
SLC22A3	6581	genome.wustl.edu	37	6	160858113	160858113	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	6	160858113	160858113	G	A	SNP	SLC22A3	NM_021977.2	human	genbank	58_37c	+1	reviewed	silent	c.1158	p.S386	0.984	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	PatternScan_SUGAR_TRANSPORT_1,HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SLC4A7	9497	genome.wustl.edu	37	3	27418337	27418337	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	27418337	27418337	C	T	SNP	SLC4A7	NM_003615.3	human	genbank	58_37c	-1	validated	splice_site	c.3564-1	e25-1	1.000	-	-	-	no_errors
SPANXD	64648	genome.wustl.edu	37	X	140786506	140786506	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	X	140786506	140786506	G	A	SNP	SPANXD	NM_032417.2	human	genbank	58_37c	-1	reviewed	silent	c.57	p.N19	0.016	HMMPfam_SPAN-X	HMMPfam_SPAN-X	-	no_errors
SPATA9	83890	genome.wustl.edu	37	5	95011246	95011246	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	95011246	95011246	G	A	SNP	SPATA9	NM_031952.3	human	genbank	58_37c	-1	validated	missense	c.248	p.S83F	0.629	NULL	NULL	-	no_errors
TATDN3	128387	genome.wustl.edu	37	1	212985604	212985604	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	1	212985604	212985604	G	A	SNP	TATDN3	NM_001042552.2	human	genbank	58_37c	+1	validated	silent	c.615	p.V205	1.000	HMMPfam_TatD_DNase,superfamily_Metallo-dependent hydrolases	HMMPfam_TatD_DNase,superfamily_Metallo-dependent hydrolases	-	no_errors
TGFBRAP1	9392	genome.wustl.edu	37	2	105897089	105897089	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	2	105897089	105897089	G	A	SNP	TGFBRAP1	NM_001142621.1	human	genbank	58_37c	-1	validated	missense	c.1213	p.H405Y	1.000	NULL	HMMPfam_Vps39_1,HMMPfam_Vps39_2	-	no_errors
TMCO6	55374	genome.wustl.edu	37	5	140022500	140022500	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	140022500	140022500	C	T	SNP	TMCO6	ENST00000252100	human	ensembl	58_37c	+1	known	missense	c.698	p.S233F	0.990	superfamily_ARM-type_fold	HMMSmart_ARM,superfamily_ARM-type_fold	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	A	rs28934574	byCluster	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	17	7577094	7577094	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.844	p.R282W	0.997	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
WDR70	55100	genome.wustl.edu	37	5	37605229	37605229	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	5	37605229	37605229	G	A	SNP	WDR70	NM_018034.2	human	genbank	58_37c	+1	provisional	silent	c.981	p.T327	0.185	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
XIRP1	165904	genome.wustl.edu	37	3	39226889	39226889	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	3	39226889	39226889	G	A	SNP	XIRP1	NM_194293.2	human	genbank	58_37c	-1	provisional	missense	c.4048	p.P1350S	0.000	NULL	HMMPfam_Xin	-	no_errors
ZFHX3	463	genome.wustl.edu	37	16	72984482	72984482	+	Silent	SNP	G	G	A	rs150708280	by1000genomes	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	16	72984482	72984482	G	A	SNP	ZFHX3	NM_006885.3	human	genbank	58_37c	-1	reviewed	silent	c.3102	p.I1034	0.985	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZKSCAN2	342357	genome.wustl.edu	37	16	25266659	25266659	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	16	25266659	25266659	C	T	SNP	ZKSCAN2	NM_001012981.4	human	genbank	58_37c	-1	validated	missense	c.454	p.V152M	0.013	HMMSmart_SM00431	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF780B	163131	genome.wustl.edu	37	19	40541078	40541078	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Z-01A-11D-A10Y-09	TCGA-E2-A14Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c83eaaca-ced5-4630-abb5-ef34db888753	ef3b19d2-804c-4f88-bfc7-b0057d166e81	19	40541078	40541078	C	T	SNP	ZNF780B	NM_001005851.2	human	genbank	58_37c	-1	validated	missense	c.1688	p.G563E	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
