
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/mRNAseq_preprocessor/broadinstitute.org/cancer.genome.analysis/10090/32/mRNA_seq_preprocess.R")
> result <- main("-m", "-n", "-oCOADREAD", "-l/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COADREAD/4392087/GDAC_MergeDataFiles_3202188/COADREAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data.data.txt", "-a/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COADREAD/4392076/GDAC_MergeDataFiles_4310882/COADREAD.rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data.data.txt", "-b", "-c/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COADREAD/4392090/GDAC_MergeDataFiles_4310857/COADREAD.rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data.data.txt", "-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/mRNAseq_preprocessor/broadinstitute.org/cancer.genome.analysis/10090/32/")
> q(save="no")
