Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1BG	1	broad.mit.edu	37	19	58864777	58864777	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1BG	1	broad.mit.edu	37	19	58864777	58864777	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL3	126767	broad.mit.edu	37	1	12785399	12785399	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL3	126767	broad.mit.edu	37	1	12785399	12785399	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215855534	215855534	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215855534	215855534	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107645531	107645532	+	Intron	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107645531	107645532	+	Intron	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	66978850	66978850	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	66978850	66978850	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169830481	169830481	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169830481	169830481	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD2	225	broad.mit.edu	37	12	39947896	39947896	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD2	225	broad.mit.edu	37	12	39947896	39947896	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148586546	148586546	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148586546	148586546	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132345611	132345611	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132345611	132345611	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADM	34	broad.mit.edu	37	1	76190403	76190403	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADM	34	broad.mit.edu	37	1	76190403	76190403	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20448612	20448612	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20448612	20448612	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236911057	236911057	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236911057	236911057	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM15	8751	broad.mit.edu	37	1	155028998	155028998	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM15	8751	broad.mit.edu	37	1	155028998	155028998	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM18	8749	broad.mit.edu	37	8	39442795	39442795	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM18	8749	broad.mit.edu	37	8	39442795	39442795	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106091221	106091221	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106369488	106369488	+	Splice_Site	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106511918	106511918	+	RNA	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106518244	106518244	+	Splice_Site	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106559690	106559690	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926344	106926344	+	RNA	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107048915	107048915	+	RNA	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107099338	107099338	+	RNA	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107099351	107099351	+	RNA	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107131276	107131276	+	RNA	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106369488	106369488	+	Splice_Site	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106511918	106511918	+	RNA	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926344	106926344	+	RNA	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107048915	107048915	+	RNA	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107099338	107099338	+	RNA	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107099351	107099351	+	RNA	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107131276	107131276	+	RNA	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72490001	72490001	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72490001	72490001	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77317919	77317919	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77317919	77317919	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43823527	43823527	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43823527	43823527	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79080466	79080466	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79080466	79080466	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131964280	131964280	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131964280	131964280	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44150526	44150526	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44150526	44150526	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFMID	125061	broad.mit.edu	37	17	76203015	76203015	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFMID	125061	broad.mit.edu	37	17	76203015	76203015	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP7	653268	broad.mit.edu	37	10	51464849	51464849	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP7	653268	broad.mit.edu	37	10	51464849	51464849	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50307914	50307914	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50307914	50307914	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105407065	105407065	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105407065	105407065	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77984490	77984490	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77984490	77984490	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96890213	96890213	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96890213	96890213	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33147594	33147594	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33147594	33147594	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137801497	137801497	+	3'UTR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137801497	137801497	+	3'UTR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125850120	125850120	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125850120	125850120	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45907736	45907736	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45907736	45907736	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41513275	41513275	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41522546	41522546	+	Intron	SNP	G	T	T	rs138948238	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41571699	41571699	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41513275	41513275	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41522546	41522546	+	Intron	SNP	G	T	T	rs138948238	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41571699	41571699	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114278125	114278125	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114278125	114278125	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91980363	91980363	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91980363	91980363	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73956470	73956470	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73956470	73956470	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A3	441425	broad.mit.edu	37	9	43133199	43133199	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A3	441425	broad.mit.edu	37	9	43133199	43133199	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A4	728747	broad.mit.edu	37	9	69420354	69420354	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A4	728747	broad.mit.edu	37	9	69420354	69420354	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD35	148741	broad.mit.edu	37	1	145555761	145555761	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD35	148741	broad.mit.edu	37	1	145555761	145555761	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD5	63926	broad.mit.edu	37	20	10025083	10025083	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD5	63926	broad.mit.edu	37	20	10025083	10025083	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99898150	99898150	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99898150	99898150	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	69933978	69933978	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	69933978	69933978	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26353816	26353816	+	5'UTR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26353816	26353816	+	5'UTR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101368503	101368503	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101368503	101368503	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M1	8907	broad.mit.edu	37	19	16339013	16339013	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M1	8907	broad.mit.edu	37	19	16339013	16339013	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M2	10053	broad.mit.edu	37	19	10692296	10692296	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M2	10053	broad.mit.edu	37	19	10692296	10692296	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCS	325	broad.mit.edu	37	1	159558125	159558125	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCS	325	broad.mit.edu	37	1	159558125	159558125	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36109390	36109390	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24885534	24885534	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24959146	24959147	+	Splice_Site	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24885534	24885534	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24959146	24959147	+	Splice_Site	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP24	83478	broad.mit.edu	37	4	86916250	86916250	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP24	83478	broad.mit.edu	37	4	86916250	86916250	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145759399	145759399	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145759399	145759399	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4A	5926	broad.mit.edu	37	14	58772783	58772783	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4A	5926	broad.mit.edu	37	14	58830859	58830859	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4A	5926	broad.mit.edu	37	14	58772783	58772783	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4A	5926	broad.mit.edu	37	14	58830859	58830859	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL2	56938	broad.mit.edu	37	12	27554138	27554138	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL2	56938	broad.mit.edu	37	12	27554138	27554138	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155327419	155327419	+	Missense_Mutation	SNP	C	A	A	rs142726363		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPHD2	57168	broad.mit.edu	37	22	26839048	26839048	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPHD2	57168	broad.mit.edu	37	22	26839048	26839048	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119737474	119737474	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119943142	119943142	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119737474	119737474	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119943142	119943142	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96779353	96779353	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96779353	96779353	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATIC	471	broad.mit.edu	37	2	216200872	216200872	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATIC	471	broad.mit.edu	37	2	216200872	216200872	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138882100	138882100	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138882100	138882100	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25276228	25276228	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25276228	25276228	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A3	79572	broad.mit.edu	37	3	194180297	194180297	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A3	79572	broad.mit.edu	37	3	194180297	194180297	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160105515	160105515	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160105515	160105515	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50244027	50244027	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50244027	50244027	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3527985	3527985	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3527985	3527985	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79425854	79425854	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79425854	79425854	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1A	11177	broad.mit.edu	37	14	35253077	35253077	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1A	11177	broad.mit.edu	37	14	35253077	35253077	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599263	136599263	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599263	136599263	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND7	222389	broad.mit.edu	37	10	13541840	13541840	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND7	222389	broad.mit.edu	37	10	13541840	13541840	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST1	7439	broad.mit.edu	37	11	61725728	61725728	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST1	7439	broad.mit.edu	37	11	61725728	61725728	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC7	79444	broad.mit.edu	37	20	61867933	61867933	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69092865	69092865	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7861999	7861999	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7861999	7861999	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD8	10902	broad.mit.edu	37	5	137475931	137475931	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD8	10902	broad.mit.edu	37	5	137475931	137475931	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	886955	886955	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	886955	886955	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55815000	55815000	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55815000	55815000	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BST1	683	broad.mit.edu	37	4	15713580	15713580	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BST1	683	broad.mit.edu	37	4	15713580	15713580	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13427330	13427330	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13427330	13427330	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107937684	107937684	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107937684	107937684	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A2	11118	broad.mit.edu	37	6	26373142	26373142	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A2	11118	broad.mit.edu	37	6	26373142	26373142	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf28	27291	broad.mit.edu	37	10	99968844	99968844	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf28	27291	broad.mit.edu	37	10	99968844	99968844	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102753055	102753055	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102753055	102753055	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf58	10944	broad.mit.edu	37	11	16760379	16760379	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf58	10944	broad.mit.edu	37	11	16760379	16760379	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf104	55172	broad.mit.edu	37	14	50100519	50100519	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf104	55172	broad.mit.edu	37	14	50100519	50100519	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf106	55320	broad.mit.edu	37	14	45711635	45711635	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf106	55320	broad.mit.edu	37	14	45711635	45711635	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	81289166	81289166	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	81289166	81289166	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24922707	24922707	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24922707	24922707	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90168410	90168410	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf102	400591	broad.mit.edu	37	17	32905798	32905798	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf102	400591	broad.mit.edu	37	17	32905798	32905798	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45502609	45502609	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45502609	45502609	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf22	79863	broad.mit.edu	37	18	77805852	77805852	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QL4	338761	broad.mit.edu	37	12	49726876	49726876	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QL4	338761	broad.mit.edu	37	12	49726876	49726876	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf106	55765	broad.mit.edu	37	1	200876863	200876863	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf106	55765	broad.mit.edu	37	1	200876863	200876863	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf177	163747	broad.mit.edu	37	1	55273638	55273638	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf177	163747	broad.mit.edu	37	1	55273638	55273638	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf200	644997	broad.mit.edu	37	1	9714445	9714445	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf200	644997	broad.mit.edu	37	1	9714445	9714445	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf27	54953	broad.mit.edu	37	1	186367533	186367533	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf27	54953	broad.mit.edu	37	1	186367533	186367533	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf12	55184	broad.mit.edu	37	20	18365244	18365244	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf12	55184	broad.mit.edu	37	20	18365244	18365244	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31683109	31683109	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31683109	31683109	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf54	113278	broad.mit.edu	37	20	742592	742592	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106690424	106690424	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf15	89876	broad.mit.edu	37	3	119445029	119445029	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf15	89876	broad.mit.edu	37	3	119445029	119445029	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf18	51161	broad.mit.edu	37	3	50598513	50598513	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf18	51161	broad.mit.edu	37	3	50598513	50598513	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98762100	98762100	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98762100	98762100	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123731377	123731377	+	Silent	SNP	G	A	A	rs142157475		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123731377	123731377	+	Silent	SNP	G	A	A	rs142157475		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41172184	41172184	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41172184	41172184	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32293213	32293213	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32293213	32293213	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976771	47976771	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976771	47976771	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127804197	127804197	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127804197	127804197	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf221	154288	broad.mit.edu	37	6	74072850	74072850	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf221	154288	broad.mit.edu	37	6	74072850	74072850	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf64	55776	broad.mit.edu	37	6	39073161	39073161	+	3'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf64	55776	broad.mit.edu	37	6	39073605	39073605	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf64	55776	broad.mit.edu	37	6	39073161	39073161	+	3'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf64	55776	broad.mit.edu	37	6	39073605	39073605	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf31	286122	broad.mit.edu	37	8	144124596	144124596	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf31	286122	broad.mit.edu	37	8	144124596	144124596	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf45	157777	broad.mit.edu	37	8	67786809	67786809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf45	157777	broad.mit.edu	37	8	67786809	67786809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135374960	135374960	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135374960	135374960	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA11	770	broad.mit.edu	37	19	49147768	49147768	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA11	770	broad.mit.edu	37	19	49147768	49147768	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9005911	9005911	+	5'Flank	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9005911	9005911	+	5'Flank	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181708384	181708384	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181759781	181759781	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181708384	181708384	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181759781	181759781	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1H	8912	broad.mit.edu	37	16	1262143	1262143	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1H	8912	broad.mit.edu	37	16	1262143	1262143	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54676191	54676191	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54676191	54676191	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7331418	7331418	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7331418	7331418	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71406162	71406162	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71406162	71406162	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12708721	12708722	+	Intron	INS	-	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3040126	3040126	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3041536	3041536	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3040126	3040126	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3041536	3041536	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC102B	79839	broad.mit.edu	37	18	66504561	66504561	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC102B	79839	broad.mit.edu	37	18	66504561	66504561	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179701637	179701637	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179701637	179701637	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC21	64793	broad.mit.edu	37	1	26597677	26597677	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC21	64793	broad.mit.edu	37	1	26597677	26597677	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86120478	86120478	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86120478	86120478	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNG2	901	broad.mit.edu	37	4	78081781	78081781	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNG2	901	broad.mit.edu	37	4	78081781	78081781	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325067	158325067	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325067	158325067	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD226	10666	broad.mit.edu	37	18	67563048	67563049	+	Missense_Mutation	DNP	CG	TT	TT	rs148019790		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD226	10666	broad.mit.edu	37	18	67563048	67563049	+	Missense_Mutation	DNP	CG	TT	TT	rs148019790		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD46	4179	broad.mit.edu	37	1	207941319	207941319	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD46	4179	broad.mit.edu	37	1	207941319	207941319	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121822487	121822487	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121822487	121822487	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21947748	21947748	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21947748	21947748	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487952	24487952	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24491631	24491631	+	Intron	DEL	A	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487952	24487952	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24491631	24491631	+	Intron	DEL	A	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21752327	21752327	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH15	1013	broad.mit.edu	37	16	89245761	89245761	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH15	1013	broad.mit.edu	37	16	89245761	89245761	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19612583	19612583	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19612583	19612583	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26915772	26915772	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK12	51755	broad.mit.edu	37	17	37627734	37627734	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK12	51755	broad.mit.edu	37	17	37627734	37627734	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK1	983	broad.mit.edu	37	10	62544403	62544403	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117265970	117265970	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117265970	117265970	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170L	645455	broad.mit.edu	37	4	119461571	119461571	+	Intron	SNP	C	A	A	rs145176485	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170L	645455	broad.mit.edu	37	4	119461571	119461571	+	Intron	SNP	C	A	A	rs145176485	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13068240	13068240	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13068240	13068240	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES2	8824	broad.mit.edu	37	16	66969550	66969550	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES3	23491	broad.mit.edu	37	16	67006842	67006842	+	Missense_Mutation	SNP	G	C	C	rs149091298		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES3	23491	broad.mit.edu	37	16	67006842	67006842	+	Missense_Mutation	SNP	G	C	C	rs149091298		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES7	221223	broad.mit.edu	37	16	55893436	55893436	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES7	221223	broad.mit.edu	37	16	55893436	55893436	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31911043	31911043	+	5'Flank	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31911043	31911043	+	5'Flank	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196971786	196971786	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196971786	196971786	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB2	114336	broad.mit.edu	37	19	49535356	49535356	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB2	114336	broad.mit.edu	37	19	49535356	49535356	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49548727	49548727	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6194767	6194767	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6194767	6194767	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61707560	61707560	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61707560	61707560	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	443200	443200	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	443200	443200	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHML	1122	broad.mit.edu	37	1	241798123	241798123	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHML	1122	broad.mit.edu	37	1	241798123	241798123	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109937385	109937385	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109937385	109937385	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240072216	240072216	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240072216	240072216	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA2	1135	broad.mit.edu	37	8	27320796	27320796	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA2	1135	broad.mit.edu	37	8	27320796	27320796	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST3	9469	broad.mit.edu	37	10	73766983	73766983	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST3	9469	broad.mit.edu	37	10	73766983	73766983	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLU	1191	broad.mit.edu	37	8	27462494	27462494	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLU	1191	broad.mit.edu	37	8	27462494	27462494	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87672173	87672173	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87673463	87673463	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87672173	87672173	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87673463	87673463	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74384005	74384005	+	Missense_Mutation	SNP	C	A	A	rs142080236		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74384005	74384005	+	Missense_Mutation	SNP	C	A	A	rs142080236		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100095308	100095308	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100095308	100095308	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99690518	99690518	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	148112699	148112699	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	148112699	148112699	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125547729	125547729	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125547729	125547729	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51111474	51111474	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51111474	51111474	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103428162	103428162	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103428162	103428162	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75860807	75860808	+	Intron	DNP	GC	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75860807	75860808	+	Intron	DNP	GC	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101824294	101824294	+	Silent	SNP	G	T	T	rs146027381		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101824294	101824294	+	Silent	SNP	G	T	T	rs146027381		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48267222	48267222	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48267222	48267222	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139767984	139767984	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139767984	139767984	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86488363	86488363	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86590523	86590523	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86488363	86488363	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86590523	86590523	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71012454	71012454	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71012454	71012454	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPB1	1315	broad.mit.edu	37	11	14488034	14488034	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPB1	1315	broad.mit.edu	37	11	14488034	14488034	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS4	51138	broad.mit.edu	37	4	83989540	83989540	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS4	51138	broad.mit.edu	37	4	83989540	83989540	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ7	10229	broad.mit.edu	37	16	19079217	19079217	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ7	10229	broad.mit.edu	37	16	19079217	19079217	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA5	93979	broad.mit.edu	37	7	129986302	129986302	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA5	93979	broad.mit.edu	37	7	129986302	129986302	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA6	57094	broad.mit.edu	37	8	68658312	68658312	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA6	57094	broad.mit.edu	37	8	68658312	68658312	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83221441	83221441	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83221441	83221441	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE7	27132	broad.mit.edu	37	16	89661869	89661869	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE7	27132	broad.mit.edu	37	16	89661869	89661869	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPOX	1371	broad.mit.edu	37	3	98307565	98307565	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPOX	1371	broad.mit.edu	37	3	98307565	98307565	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88009303	88009303	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88009303	88009303	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207787753	207787753	+	Nonsense_Mutation	SNP	C	T	T	rs55749440		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75927086	75927086	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75927086	75927086	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBA1	1411	broad.mit.edu	37	17	27576293	27576293	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBA1	1411	broad.mit.edu	37	17	27576293	27576293	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSHL1	1444	broad.mit.edu	37	17	61988470	61988470	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSHL1	1444	broad.mit.edu	37	17	61988470	61988470	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2799909	2799909	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2799909	2799909	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113326812	113326813	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113678692	113678692	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114111138	114111138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113326812	113326813	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113678692	113678692	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114111138	114111138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST4	1472	broad.mit.edu	37	20	23666528	23666528	+	3'UTR	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST4	1472	broad.mit.edu	37	20	23666528	23666528	+	3'UTR	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST9L	128821	broad.mit.edu	37	20	23545530	23545530	+	3'UTR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST9L	128821	broad.mit.edu	37	20	23545530	23545530	+	3'UTR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19995630	19995630	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19996301	19996301	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19995630	19995630	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19996301	19996301	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80782801	80782801	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80782803	80782803	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80831172	80831172	+	Intron	SNP	C	A	A	rs13408126		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80782801	80782801	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80782803	80782803	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80831172	80831172	+	Intron	SNP	C	A	A	rs13408126		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSL3	392360	broad.mit.edu	37	9	90388095	90388095	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSL3	392360	broad.mit.edu	37	9	90388095	90388095	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70279782	70279782	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70279782	70279782	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16975227	16975228	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16975227	16975228	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUEDC1	404093	broad.mit.edu	37	17	55962798	55962798	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUEDC1	404093	broad.mit.edu	37	17	55962798	55962798	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41442196	41442196	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41442196	41442196	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A5	1577	broad.mit.edu	37	7	99283004	99283004	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A5	1577	broad.mit.edu	37	7	99283004	99283004	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47403757	47403757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47403757	47403757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15752358	15752358	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH4	27128	broad.mit.edu	37	22	37695373	37695373	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH4	27128	broad.mit.edu	37	22	37695373	37695373	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSA	23384	broad.mit.edu	37	22	24718090	24718090	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSA	23384	broad.mit.edu	37	22	24718090	24718090	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124329406	124329406	+	5'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124329406	124329406	+	5'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39381742	39381742	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39381742	39381742	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31312315	31312315	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36397068	36397068	+	Intron	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36397068	36397068	+	Intron	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14996039	14996039	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14996039	14996039	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN5	84516	broad.mit.edu	37	16	23669725	23669725	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN5	84516	broad.mit.edu	37	16	23669725	23669725	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110574146	110574146	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110574146	110574146	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169157528	169157528	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169157528	169157528	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31630901	31630901	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14741226	14741226	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14741226	14741226	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55340690	55340690	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55349179	55349179	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55340690	55340690	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55349179	55349179	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX15	1665	broad.mit.edu	37	4	24577853	24577853	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX15	1665	broad.mit.edu	37	4	24577853	24577853	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX34	9704	broad.mit.edu	37	19	47856580	47856580	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX34	9704	broad.mit.edu	37	19	47856580	47856580	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72135088	72135089	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72135088	72135089	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH2	1730	broad.mit.edu	37	X	96603405	96603405	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK2	27123	broad.mit.edu	37	4	108124792	108124792	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK2	27123	broad.mit.edu	37	4	108124792	108124792	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13357525	13357525	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13357525	13357525	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG4	1742	broad.mit.edu	37	17	7111628	7111628	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG4	1742	broad.mit.edu	37	17	7111628	7111628	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101193398	101193398	+	5'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101193398	101193398	+	5'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170597274	170597274	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170597274	170597274	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124339028	124339028	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32509377	32509377	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32509377	32509377	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21840846	21840846	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21840846	21840846	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7696322	7696322	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7696322	7696322	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13735211	13735211	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13735211	13735211	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196681688	196681688	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196681688	196681688	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC7	7266	broad.mit.edu	37	17	40152592	40152592	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC7	7266	broad.mit.edu	37	17	40152592	40152592	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220247996	220247996	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220247996	220247996	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94337787	94337787	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94337787	94337787	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129179651	129179651	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129179651	129179651	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169145634	169145634	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169435718	169435718	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169145634	169145634	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169435718	169435718	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51274918	51274918	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51274918	51274918	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK5	80005	broad.mit.edu	37	8	25220531	25220531	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK5	80005	broad.mit.edu	37	8	25220531	25220531	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154585871	154585871	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154585871	154585871	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP8	54878	broad.mit.edu	37	15	65799565	65799565	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP8	54878	broad.mit.edu	37	15	65799565	65799565	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28574440	28574440	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29038923	29038923	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29038923	29038923	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56481510	56481510	+	Intron	SNP	C	A	A	rs140152012	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56496636	56496636	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56481510	56481510	+	Intron	SNP	C	A	A	rs140152012	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56496636	56496636	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTWD1	56986	broad.mit.edu	37	15	49917565	49917565	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTWD1	56986	broad.mit.edu	37	15	49917565	49917565	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348320	348320	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348320	348320	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71838610	71838610	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71838610	71838610	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYX1C1	161582	broad.mit.edu	37	15	55724738	55724738	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172533350	172533350	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172533350	172533350	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM1	9695	broad.mit.edu	37	3	5243547	5243547	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM1	9695	broad.mit.edu	37	3	5243547	5243547	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52374285	52374285	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52374285	52374285	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42953218	42953218	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1	23301	broad.mit.edu	37	2	63217871	63217871	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1	23301	broad.mit.edu	37	2	63217871	63217871	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4EBP1	1978	broad.mit.edu	37	8	37917401	37917401	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4EBP1	1978	broad.mit.edu	37	8	37917401	37917401	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4H	7458	broad.mit.edu	37	7	73588723	73588723	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4H	7458	broad.mit.edu	37	7	73588723	73588723	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR4P	326342	broad.mit.edu	37	19	6974767	6974767	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR4P	326342	broad.mit.edu	37	19	6974767	6974767	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD4	9583	broad.mit.edu	37	8	23297538	23297538	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD7	57089	broad.mit.edu	37	10	101464343	101464343	+	Missense_Mutation	SNP	G	A	A	rs61738520		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD7	57089	broad.mit.edu	37	10	101464343	101464343	+	Missense_Mutation	SNP	G	A	A	rs61738520		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132512719	132512719	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132512719	132512719	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132537778	132537778	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L5	57669	broad.mit.edu	37	2	120831672	120831672	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L5	57669	broad.mit.edu	37	2	120831672	120831672	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96963122	96963122	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96963122	96963122	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134968458	134968458	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134968458	134968458	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB3	2049	broad.mit.edu	37	3	184293537	184293537	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB3	2049	broad.mit.edu	37	3	184293537	184293537	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562205	142562205	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562205	142562205	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8	2059	broad.mit.edu	37	12	15777428	15777428	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8	2059	broad.mit.edu	37	12	15777428	15777428	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56482201	56482201	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56482201	56482201	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212522553	212522553	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212522553	212522553	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFA	2108	broad.mit.edu	37	15	76552821	76552821	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV5	2119	broad.mit.edu	37	3	185774902	185774902	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV5	2119	broad.mit.edu	37	3	185774902	185774902	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EWSR1	2130	broad.mit.edu	37	22	29695514	29695514	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EWSR1	2130	broad.mit.edu	37	22	29695514	29695514	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57684697	57684697	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57684697	57684697	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108383289	108383289	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108383289	108383289	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	119123235	119123235	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	119123235	119123235	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45633570	45633570	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45633570	45633570	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154158604	154158604	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154158604	154158604	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP9	646480	broad.mit.edu	37	8	82371530	82371530	+	Missense_Mutation	SNP	G	T	T	rs141600603	byFrequency;by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP9	646480	broad.mit.edu	37	8	82371530	82371530	+	Missense_Mutation	SNP	G	T	T	rs141600603	byFrequency;by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM124A	220108	broad.mit.edu	37	13	51826250	51826250	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM124A	220108	broad.mit.edu	37	13	51826250	51826250	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184764063	184764063	+	3'UTR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184764063	184764063	+	3'UTR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139165277	139165277	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139165277	139165277	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150391735	150391735	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150396374	150396374	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150391735	150391735	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150396374	150396374	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM20B	9917	broad.mit.edu	37	1	179013302	179013302	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM20B	9917	broad.mit.edu	37	1	179013302	179013302	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26F	441168	broad.mit.edu	37	6	116779690	116779690	+	5'Flank	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26F	441168	broad.mit.edu	37	6	116779690	116779690	+	5'Flank	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21826322	21826322	+	RNA	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21826322	21826322	+	RNA	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232306	12232306	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232306	12232306	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627175	43627175	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM76A	199870	broad.mit.edu	37	1	28086026	28086026	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM76A	199870	broad.mit.edu	37	1	28086026	28086026	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92535025	92535025	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92535025	92535025	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127873059	127873059	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127866324	127866324	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127873059	127873059	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO47	494188	broad.mit.edu	37	17	37093351	37093351	+	3'UTR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO47	494188	broad.mit.edu	37	17	37093351	37093351	+	3'UTR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161487775	161487775	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161487775	161487775	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161641116	161641116	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161641116	161641116	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2C	9103	broad.mit.edu	37	1	161565513	161565513	+	Intron	SNP	G	A	A	rs143473118	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2C	9103	broad.mit.edu	37	1	161565513	161565513	+	Intron	SNP	G	A	A	rs143473118	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157567643	157567643	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157567643	157567643	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDX1	2230	broad.mit.edu	37	11	110327730	110327731	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FFAR3	2865	broad.mit.edu	37	19	35850707	35850707	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FFAR3	2865	broad.mit.edu	37	19	35850707	35850707	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155489562	155489562	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155489562	155489562	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14949224	14949224	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14949224	14949224	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIBIN	387758	broad.mit.edu	37	11	27016134	27016134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIBIN	387758	broad.mit.edu	37	11	27016134	27016134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9	11328	broad.mit.edu	37	7	33014220	33014220	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ36000	284124	broad.mit.edu	37	17	21904614	21904614	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40330	645784	broad.mit.edu	37	2	89084304	89084304	+	RNA	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40330	645784	broad.mit.edu	37	2	89084304	89084304	+	RNA	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT2	23768	broad.mit.edu	37	14	86088698	86088698	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28891568	28891568	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO4	2329	broad.mit.edu	37	1	171300844	171300844	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO4	2329	broad.mit.edu	37	1	171300844	171300844	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1NB	158521	broad.mit.edu	37	X	147062922	147062922	+	5'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1NB	158521	broad.mit.edu	37	X	147062922	147062922	+	5'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC5	252995	broad.mit.edu	37	1	33330312	33330312	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC5	252995	broad.mit.edu	37	1	33330312	33330312	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNTB	2342	broad.mit.edu	37	14	65510871	65510871	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNTB	2342	broad.mit.edu	37	14	65510871	65510871	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXB2	442425	broad.mit.edu	37	9	79635401	79635401	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L1	200350	broad.mit.edu	37	2	114257837	114257837	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXG1	2290	broad.mit.edu	37	14	29237772	29237772	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXG1	2290	broad.mit.edu	37	14	29237772	29237772	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44974010	44974010	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44974010	44974010	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABPB2	126626	broad.mit.edu	37	1	151079676	151079676	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABPB2	126626	broad.mit.edu	37	1	151079676	151079676	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46967350	46967350	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46995298	46995298	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46967350	46967350	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46995298	46995298	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161578770	161578770	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161578770	161578770	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27586107	27586107	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27586107	27586107	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNS	2588	broad.mit.edu	37	16	88884552	88884552	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNS	2588	broad.mit.edu	37	16	88884552	88884552	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155265415	155265415	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL4	374378	broad.mit.edu	37	11	11292687	11292687	+	3'UTR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL4	374378	broad.mit.edu	37	11	11292687	11292687	+	3'UTR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173873452	173873452	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173873452	173873452	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101005823	101005823	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101005823	101005823	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9822886	9822886	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9822886	9822886	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8111628	8111628	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8111628	8111628	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42465877	42465877	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42465877	42465877	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP6	474344	broad.mit.edu	37	7	150324721	150324721	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP6	474344	broad.mit.edu	37	7	150324721	150324721	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC2	54810	broad.mit.edu	37	1	78546432	78546432	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC2	54810	broad.mit.edu	37	1	78546432	78546432	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJD4	219770	broad.mit.edu	37	10	35894512	35894512	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJD4	219770	broad.mit.edu	37	10	35894512	35894512	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134239728	134239728	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134239728	134239728	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9737166	9737166	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9737166	9737166	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151228577	151228577	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151228577	151228577	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129428905	129428905	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129428905	129428905	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMCL1L	64396	broad.mit.edu	37	5	177612779	177612779	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMCL1L	64396	broad.mit.edu	37	5	177612779	177612779	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNE	10020	broad.mit.edu	37	9	36229167	36229167	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNE	10020	broad.mit.edu	37	9	36229167	36229167	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH1	55094	broad.mit.edu	37	19	33602647	33602647	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH1	55094	broad.mit.edu	37	19	33602647	33602647	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47678424	47678424	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47678424	47678424	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46856259	46856259	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46856259	46856259	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR124	25960	broad.mit.edu	37	8	37691586	37691586	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR124	25960	broad.mit.edu	37	8	37691586	37691586	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR126	57211	broad.mit.edu	37	6	142689054	142689054	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR126	57211	broad.mit.edu	37	6	142689054	142689054	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043415	20043415	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043415	20043415	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR21	2844	broad.mit.edu	37	9	125797553	125797553	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR21	2844	broad.mit.edu	37	9	125797553	125797553	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19884010	19884010	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19884010	19884010	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPT2	84706	broad.mit.edu	37	16	46931703	46931703	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPT2	84706	broad.mit.edu	37	16	46931703	46931703	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123471176	123471176	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123471176	123471176	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHPR	9380	broad.mit.edu	37	9	37430738	37430738	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153174098	153174098	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94316706	94316706	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94316706	94316706	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	101847268	101847268	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	101847268	101847268	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86468553	86468553	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86468553	86468553	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM4	2914	broad.mit.edu	37	6	34007948	34007948	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM4	2914	broad.mit.edu	37	6	34007948	34007948	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM6	2916	broad.mit.edu	37	5	178417662	178417662	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM6	2916	broad.mit.edu	37	5	178417662	178417662	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRWD1	83743	broad.mit.edu	37	19	48949791	48949791	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRWD1	83743	broad.mit.edu	37	19	48949791	48949791	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72657499	72657499	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72657499	72657499	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP10	85865	broad.mit.edu	37	7	90001556	90001556	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP10	85865	broad.mit.edu	37	7	90001556	90001556	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145038115	145038115	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145038115	145038115	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H3F3B	3021	broad.mit.edu	37	17	73774911	73774911	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H3F3B	3021	broad.mit.edu	37	17	73774911	73774911	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAMP	57817	broad.mit.edu	37	19	35775624	35775624	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAMP	57817	broad.mit.edu	37	19	35775624	35775624	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN4	404037	broad.mit.edu	37	19	19369598	19369598	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN4	404037	broad.mit.edu	37	19	19371853	19371853	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN4	404037	broad.mit.edu	37	19	19369598	19369598	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN4	404037	broad.mit.edu	37	19	19371853	19371853	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS6	54801	broad.mit.edu	37	9	19063030	19063030	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS6	54801	broad.mit.edu	37	9	19063030	19063030	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5573267	5573267	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5573267	5573267	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73615894	73615894	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73615894	73615894	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41049340	41049340	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41054947	41054947	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41049340	41049340	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41054947	41054947	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43477436	43477437	+	Intron	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43483856	43483856	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43477436	43477437	+	Intron	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43483856	43483856	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93808458	93808458	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93808458	93808458	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28441803	28441803	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK3	10114	broad.mit.edu	37	11	33369369	33369369	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK3	10114	broad.mit.edu	37	11	33369369	33369369	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71136584	71136584	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71136584	71136584	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DQB1	3119	broad.mit.edu	37	6	32628032	32628032	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DQB1	3119	broad.mit.edu	37	6	32628032	32628032	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186062758	186062758	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186143521	186143521	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186062758	186062758	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186143521	186143521	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	42984471	42984471	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	42984471	42984471	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD11	3237	broad.mit.edu	37	2	176973884	176973884	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD11	3237	broad.mit.edu	37	2	176973884	176973884	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11301761	11301761	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209879978	209879978	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209879978	209879978	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B4	3295	broad.mit.edu	37	5	118835179	118835179	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113854041	113854041	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113854041	113854041	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147862721	147862721	+	3'UTR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147862721	147862721	+	3'UTR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33346920	33346920	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33346920	33346920	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA16	3449	broad.mit.edu	37	9	21216931	21216931	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129231104	129231104	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129231104	129231104	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21217673	21217673	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21217673	21217673	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23391222	23391222	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23391222	23391222	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFL1	374918	broad.mit.edu	37	19	46733631	46733631	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFL1	374918	broad.mit.edu	37	19	46733631	46733631	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9B	22997	broad.mit.edu	37	11	133790843	133790843	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9B	22997	broad.mit.edu	37	11	133790843	133790843	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3143466	3143466	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3143466	3143466	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76660393	76660393	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76660393	76660393	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62228508	62228508	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62228508	62228508	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15198783	15198783	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15198783	15198783	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG1	3638	broad.mit.edu	37	7	155094329	155094329	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG1	3638	broad.mit.edu	37	7	155094329	155094329	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156813052	156813052	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156814474	156814474	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156815556	156815556	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156813052	156813052	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156814474	156814474	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156815556	156815556	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1520047	1520047	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1520047	1520047	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77614629	77614629	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77614629	77614629	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS9	55756	broad.mit.edu	37	8	28654036	28654036	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS9	55756	broad.mit.edu	37	8	28654036	28654036	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48726009	48726009	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48726009	48726009	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO11	51194	broad.mit.edu	37	5	61780112	61780112	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO11	51194	broad.mit.edu	37	5	61780112	61780112	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30843422	30843422	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30843422	30843422	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417774	25417774	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417774	25417774	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISCA2	122961	broad.mit.edu	37	14	74961494	74961494	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISCA2	122961	broad.mit.edu	37	14	74961494	74961494	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31427738	31427738	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31427738	31427738	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20449351	20449351	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20449351	20449351	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7786869	7786869	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7786869	7786869	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52854232	52854232	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52854232	52854232	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7614396	7614396	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7614396	7614396	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156645115	156645115	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKA	3706	broad.mit.edu	37	15	41794614	41794614	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKA	3706	broad.mit.edu	37	15	41794614	41794614	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64968929	64968929	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64968929	64968929	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62713182	62713183	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62713182	62713183	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30032966	30032966	+	Silent	SNP	G	A	A	rs143729714	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30032966	30032966	+	Silent	SNP	G	A	A	rs143729714	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA7	3743	broad.mit.edu	37	19	49573357	49573357	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA7	3743	broad.mit.edu	37	19	49573357	49573357	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	155893915	155893915	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	155893915	155893915	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63416748	63416748	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63416748	63416748	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19492611	19492611	+	Intron	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19492611	19492611	+	Intron	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196205252	196205252	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196205252	196205252	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18213691	18213691	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18213691	18213691	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	7046740	7046740	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	7046740	7046740	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610382	10610382	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610382	10610382	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0513	9764	broad.mit.edu	37	16	85106428	85106428	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0513	9764	broad.mit.edu	37	16	85106428	85106428	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155904189	155904189	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155904189	155904189	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84930830	84930830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84930830	84930830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81224242	81224242	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81224242	81224242	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43447439	43447439	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43447439	43447439	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113376161	113376161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113376161	113376161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44872272	44872272	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3C	3797	broad.mit.edu	37	2	26203668	26203668	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3C	3797	broad.mit.edu	37	2	26203668	26203668	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57975157	57975157	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57975157	57975157	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55348941	55348941	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55377919	55377919	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55348941	55348941	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55377919	55377919	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC2	64837	broad.mit.edu	37	11	66033336	66033336	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC2	64837	broad.mit.edu	37	11	66033336	66033336	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53519011	53519011	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53519990	53519991	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53519011	53519011	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53519990	53519991	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT25	147183	broad.mit.edu	37	17	38905689	38905689	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT25	147183	broad.mit.edu	37	17	38905689	38905689	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT79	338785	broad.mit.edu	37	12	53223985	53223985	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT79	338785	broad.mit.edu	37	12	53223985	53223985	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31744130	31744130	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31744130	31744130	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-4	284827	broad.mit.edu	37	21	31802964	31802964	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-4	284827	broad.mit.edu	37	21	31802964	31802964	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933446	31933446	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933446	31933446	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153138764	153138764	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153138764	153138764	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130407513	130407513	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130407513	130407513	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6997910	6997910	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6997910	6997910	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129714272	129714272	+	Silent	SNP	C	A	A	rs138695453	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129714294	129714294	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129714272	129714272	+	Silent	SNP	C	A	A	rs138695453	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129714294	129714294	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107642144	107642144	+	Silent	SNP	G	T	T	rs141455945		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107642144	107642144	+	Silent	SNP	G	T	T	rs141455945		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107745144	107745144	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107745144	107745144	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133911832	133911832	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133911832	133911832	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASP1	3927	broad.mit.edu	37	17	37074822	37074822	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASP1	3927	broad.mit.edu	37	17	37074822	37074822	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36975117	36975117	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36975117	36975117	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEFTY2	7044	broad.mit.edu	37	1	226128567	226128567	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEFTY2	7044	broad.mit.edu	37	1	226128567	226128567	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD3	23592	broad.mit.edu	37	12	65609844	65609844	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD3	23592	broad.mit.edu	37	12	65609844	65609844	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9B	284194	broad.mit.edu	37	17	20361676	20361676	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9C	654346	broad.mit.edu	37	17	18394647	18394647	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202276367	202276367	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202276367	202276367	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX6	26468	broad.mit.edu	37	9	124976226	124976226	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX6	26468	broad.mit.edu	37	9	124976226	124976226	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55107721	55107721	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55107721	55107721	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA3	11026	broad.mit.edu	37	19	54802512	54802512	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB5	10990	broad.mit.edu	37	19	54760090	54760090	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB5	10990	broad.mit.edu	37	19	54760090	54760090	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN28B	389421	broad.mit.edu	37	6	105405135	105405135	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN28B	389421	broad.mit.edu	37	6	105405135	105405135	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNB1	4001	broad.mit.edu	37	5	126161931	126161931	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNB1	4001	broad.mit.edu	37	5	126161931	126161931	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727896	727896	broad.mit.edu	37	18	2945804	2945804	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727896	727896	broad.mit.edu	37	18	2945804	2945804	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22516646	22516646	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22516646	22516646	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP1	9361	broad.mit.edu	37	19	5711731	5711731	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP1	9361	broad.mit.edu	37	19	5711731	5711731	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF1	91694	broad.mit.edu	37	8	12586807	12586807	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF1	91694	broad.mit.edu	37	8	12586807	12586807	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160908166	160908166	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160908166	160908166	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1489886	1489886	+	Missense_Mutation	SNP	G	A	A	rs147744743	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1489886	1489886	+	Missense_Mutation	SNP	G	A	A	rs147744743	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPL	4023	broad.mit.edu	37	8	19805737	19805737	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPL	4023	broad.mit.edu	37	8	19805737	19805737	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN2	57497	broad.mit.edu	37	6	40400624	40400625	+	Missense_Mutation	DNP	CC	AA	AA	rs139791683		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN2	57497	broad.mit.edu	37	6	40400624	40400625	+	Missense_Mutation	DNP	CC	AA	AA	rs139791683		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141299376	141299376	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141299376	141299376	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57603849	57603849	+	Silent	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57573929	57573929	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57603849	57603849	+	Silent	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46905469	46905469	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46905469	46905469	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70385235	70385235	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745781	77745781	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745781	77745781	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRTM2	654429	broad.mit.edu	37	12	1943774	1943774	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRTM2	654429	broad.mit.edu	37	12	1943774	1943774	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33572548	33572548	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33572548	33572548	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	25098816	25098816	+	Intron	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	25098816	25098816	+	Intron	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP6	767558	broad.mit.edu	37	7	135635328	135635328	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160711128	160711128	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160711128	160711128	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6589075	6589075	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6589075	6589075	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14474029	14474029	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14474029	14474029	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47310710	47310710	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47310710	47310710	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151899634	151899634	+	3'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151899634	151899634	+	3'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB10	139422	broad.mit.edu	37	X	27830894	27830894	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140993020	140993020	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140993020	140993020	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEF1	64110	broad.mit.edu	37	3	184428789	184428789	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEF1	64110	broad.mit.edu	37	3	184428789	184428789	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65344700	65344700	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65344700	65344700	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35790540	35790540	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35790540	35790540	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B2	23324	broad.mit.edu	37	4	6588587	6588587	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B2	23324	broad.mit.edu	37	4	6588587	6588587	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K1	5604	broad.mit.edu	37	15	66777401	66777401	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K1	5604	broad.mit.edu	37	15	66777401	66777401	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D3	79649	broad.mit.edu	37	X	135301625	135301625	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D3	79649	broad.mit.edu	37	X	135301625	135301625	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16067755	16067755	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16067755	16067755	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS2	92935	broad.mit.edu	37	2	198571261	198571261	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS2	92935	broad.mit.edu	37	2	198571261	198571261	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57894234	57894235	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57894234	57894235	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186954283	186954283	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186954283	186954283	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138708796	138708796	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138724575	138724576	+	Intron	DNP	CA	AT	AT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138708796	138708796	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138724576	138724576	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47664609	47664609	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47664609	47664609	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47311067	47311067	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47311067	47311067	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME3	10873	broad.mit.edu	37	11	86208988	86208988	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME3	10873	broad.mit.edu	37	11	86208988	86208988	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECR	51102	broad.mit.edu	37	1	29557502	29557502	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECR	51102	broad.mit.edu	37	1	29557502	29557502	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED10	84246	broad.mit.edu	37	5	6378631	6378631	+	5'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED10	84246	broad.mit.edu	37	5	6378631	6378631	+	5'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60088407	60088407	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60088407	60088407	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED23	9439	broad.mit.edu	37	6	131944607	131944607	+	Intron	DEL	A	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED23	9439	broad.mit.edu	37	6	131944607	131944607	+	Intron	DEL	A	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED7	9443	broad.mit.edu	37	5	156565909	156565909	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED7	9443	broad.mit.edu	37	5	156565909	156565909	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX1	4222	broad.mit.edu	37	17	41738613	41738613	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX1	4222	broad.mit.edu	37	17	41738613	41738613	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2B	55798	broad.mit.edu	37	7	128141918	128141918	+	Missense_Mutation	SNP	G	T	T	rs149666702		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP5	8076	broad.mit.edu	37	12	8813485	8813485	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP5	8076	broad.mit.edu	37	12	8813485	8813485	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74900403	74900403	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74900403	74900403	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43280356	43280356	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43280356	43280356	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222800922	222800922	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222800922	222800922	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALL1	85377	broad.mit.edu	37	22	38321897	38321897	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALL1	85377	broad.mit.edu	37	22	38321897	38321897	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR519E	574463	broad.mit.edu	37	19	54183048	54183048	+	5'Flank	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR557	693142	broad.mit.edu	37	1	168344724	168344724	+	5'Flank	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR557	693142	broad.mit.edu	37	1	168344724	168344724	+	5'Flank	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151879742	151879742	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151879742	151879742	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	21913676	21913676	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	21913676	21913676	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55530930	55530930	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55530930	55530930	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP8	4317	broad.mit.edu	37	11	102595373	102595373	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP8	4317	broad.mit.edu	37	11	102595373	102595373	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MN1	4330	broad.mit.edu	37	22	28193499	28193500	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MN1	4330	broad.mit.edu	37	22	28193499	28193500	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOS	4342	broad.mit.edu	37	8	57025763	57025763	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED1	758	broad.mit.edu	37	22	43870647	43870647	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED1	758	broad.mit.edu	37	22	43870647	43870647	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS10	55173	broad.mit.edu	37	6	42185578	42185578	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS10	55173	broad.mit.edu	37	6	42185578	42185578	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A10	341116	broad.mit.edu	37	11	60561425	60561425	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A10	341116	broad.mit.edu	37	11	60561425	60561425	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1R	4486	broad.mit.edu	37	3	49935561	49935561	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1R	4486	broad.mit.edu	37	3	49935561	49935561	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1M	4499	broad.mit.edu	37	16	56667403	56667403	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1M	4499	broad.mit.edu	37	16	56667403	56667403	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS1	57509	broad.mit.edu	37	8	17512183	17512183	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS1	57509	broad.mit.edu	37	8	17512183	17512183	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100682138	100682138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100692509	100692509	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71346811	71346811	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71346811	71346811	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42338473	42338473	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42338473	42338473	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203138465	203138465	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203138465	203138465	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10214671	10214671	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10214671	10214671	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10405998	10405998	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10400385	10400385	+	Splice_Site	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10405998	10405998	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10430373	10430373	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10430373	10430373	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10356559	10356559	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10299915	10299915	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10303544	10303544	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10299915	10299915	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10303544	10303544	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111350930	111350930	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111350930	111350930	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL9	10398	broad.mit.edu	37	20	35176463	35176463	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL9	10398	broad.mit.edu	37	20	35176463	35176463	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26164978	26164978	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26164978	26164978	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76877215	76877215	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76877215	76877215	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128324349	128324349	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128324349	128324349	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24418670	24418670	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24418670	24418670	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ2	51778	broad.mit.edu	37	4	120085547	120085547	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ2	51778	broad.mit.edu	37	4	120085547	120085547	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPRT1	93100	broad.mit.edu	37	8	144657544	144657544	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPRT1	93100	broad.mit.edu	37	8	144657544	144657544	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15307192	15307192	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15307192	15307192	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145281267	145281267	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145304395	145304395	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145281267	145281267	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145304395	145304395	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144839630	144839630	+	Intron	SNP	G	A	A	rs146313248	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCK2	8440	broad.mit.edu	37	2	106509345	106509345	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCK2	8440	broad.mit.edu	37	2	106509345	106509345	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54926117	54926117	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54926117	54926117	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5L	57701	broad.mit.edu	37	12	50190676	50190676	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5L	57701	broad.mit.edu	37	12	50190676	50190676	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG2	57447	broad.mit.edu	37	14	21499135	21499135	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG2	57447	broad.mit.edu	37	14	21499135	21499135	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS1	4719	broad.mit.edu	37	2	206992579	206992579	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS1	4719	broad.mit.edu	37	2	206992579	206992579	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL3	55247	broad.mit.edu	37	4	178262519	178262519	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL3	55247	broad.mit.edu	37	4	178262519	178262519	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70450862	70450862	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70450862	70450862	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL4	84461	broad.mit.edu	37	17	7230117	7230117	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL4	84461	broad.mit.edu	37	17	7230117	7230117	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD1	4760	broad.mit.edu	37	2	182543136	182543136	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD1	4760	broad.mit.edu	37	2	182543136	182543136	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIB	4781	broad.mit.edu	37	9	14307010	14307011	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236187256	236187256	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173322896	173322896	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173322896	173322896	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55485750	55485750	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55485750	55485750	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55445881	55445881	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55445881	55445881	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR1	10316	broad.mit.edu	37	2	232389863	232389863	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR1	10316	broad.mit.edu	37	2	232389863	232389863	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162335086	162335086	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162335086	162335086	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR1	2831	broad.mit.edu	37	8	53852566	53852566	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR1	2831	broad.mit.edu	37	8	53852566	53852566	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	73013164	73013164	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	73013164	73013164	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35802002	35802002	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35802002	35802002	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107824974	107824974	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32463065	32463065	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32463065	32463065	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT18	79873	broad.mit.edu	37	8	21965372	21965372	+	Silent	SNP	C	A	A	rs34725565	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT18	79873	broad.mit.edu	37	8	21965372	21965372	+	Silent	SNP	C	A	A	rs34725565	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37358076	37358076	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37358076	37358076	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134077033	134077033	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134077033	134077033	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP62	23636	broad.mit.edu	37	19	50412101	50412101	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP62	23636	broad.mit.edu	37	19	50412101	50412101	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25914357	25914357	+	3'UTR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25914357	25914357	+	3'UTR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS3	4940	broad.mit.edu	37	12	113403519	113403519	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2B	29989	broad.mit.edu	37	9	136082503	136082503	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF3	113746	broad.mit.edu	37	11	198314	198314	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF3	113746	broad.mit.edu	37	11	198314	198314	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123838773	123838773	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123838773	123838773	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50945852	50945852	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50953834	50953834	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50964734	50964734	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50945852	50945852	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50953834	50953834	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74660154	74660154	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74660154	74660154	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161967510	161967510	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161967510	161967510	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A5	144124	broad.mit.edu	37	11	6866978	6866978	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A5	144124	broad.mit.edu	37	11	6866978	6866978	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29365229	29365229	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29365229	29365229	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14C36	127066	broad.mit.edu	37	1	248513010	248513010	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14C36	127066	broad.mit.edu	37	1	248513010	248513010	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845146	248845146	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845146	248845146	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1A1	8383	broad.mit.edu	37	17	3119640	3119640	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1A1	8383	broad.mit.edu	37	17	3119640	3119640	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1B1	347169	broad.mit.edu	37	9	125391460	125391460	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1B1	347169	broad.mit.edu	37	9	125391460	125391460	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1Q1	158131	broad.mit.edu	37	9	125377740	125377740	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1Q1	158131	broad.mit.edu	37	9	125377740	125377740	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A12	346525	broad.mit.edu	37	7	143792515	143792515	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A12	346525	broad.mit.edu	37	7	143792515	143792515	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29142241	29142241	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29142241	29142241	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247267	248247267	+	Intron	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T27	403239	broad.mit.edu	37	1	248813994	248813994	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N1	79473	broad.mit.edu	37	11	5809776	5809776	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N1	79473	broad.mit.edu	37	11	5809776	5809776	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A4	120793	broad.mit.edu	37	11	6024013	6024014	+	Nonsense_Mutation	DNP	GG	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A4	120793	broad.mit.edu	37	11	6024013	6024014	+	Nonsense_Mutation	DNP	GG	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56B4	196335	broad.mit.edu	37	11	6129809	6129809	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56B4	196335	broad.mit.edu	37	11	6129809	6129809	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AN1	390195	broad.mit.edu	37	11	59132201	59132201	+	Missense_Mutation	SNP	G	T	T	rs145916059	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AN1	390195	broad.mit.edu	37	11	59132201	59132201	+	Missense_Mutation	SNP	G	T	T	rs145916059	byFrequency	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AS1	219447	broad.mit.edu	37	11	55798481	55798481	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207550	58207550	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207550	58207550	+	Silent	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606872	55606872	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606872	55606872	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H6	79295	broad.mit.edu	37	3	97983303	97983303	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K2	402135	broad.mit.edu	37	3	98216577	98216577	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K2	402135	broad.mit.edu	37	3	98216577	98216577	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55578927	55578927	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55578927	55578927	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M10	390167	broad.mit.edu	37	11	56344790	56344790	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M10	390167	broad.mit.edu	37	11	56344790	56344790	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6A2	8590	broad.mit.edu	37	11	6815838	6815838	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6A2	8590	broad.mit.edu	37	11	6815838	6815838	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158669915	158669915	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158669915	158669915	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6T1	219874	broad.mit.edu	37	11	123814678	123814678	+	5'Flank	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6T1	219874	broad.mit.edu	37	11	123814678	123814678	+	5'Flank	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E24	26648	broad.mit.edu	37	19	9361944	9361944	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E24	26648	broad.mit.edu	37	19	9361944	9361944	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55927901	55927901	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55927901	55927901	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55523769	55523769	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55523769	55523769	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52849096	52849096	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52849096	52849096	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59367845	59367845	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59367845	59367845	+	Intron	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTX2	5015	broad.mit.edu	37	14	57270899	57270899	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTX2	5015	broad.mit.edu	37	14	57270899	57270899	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH2	341277	broad.mit.edu	37	11	7716478	7716478	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX3	5024	broad.mit.edu	37	11	57137380	57137380	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX3	5024	broad.mit.edu	37	11	57137380	57137380	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY8	286530	broad.mit.edu	37	X	1584526	1584526	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY8	286530	broad.mit.edu	37	X	1584526	1584526	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI1	29943	broad.mit.edu	37	1	17555382	17555382	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI1	29943	broad.mit.edu	37	1	17555382	17555382	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9543540	9543540	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9543572	9543572	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9543540	9543540	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9543572	9543572	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39589042	39589042	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39589042	39589042	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE1	160065	broad.mit.edu	37	11	125617679	125617679	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE1	160065	broad.mit.edu	37	11	125617679	125617679	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11Y	83259	broad.mit.edu	37	Y	4967791	4967791	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11Y	83259	broad.mit.edu	37	Y	4968236	4968236	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11Y	83259	broad.mit.edu	37	Y	4967791	4967791	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11Y	83259	broad.mit.edu	37	Y	4968236	4968236	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55566772	55566772	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55566772	55566772	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30732251	30732251	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30732251	30732251	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140474750	140474750	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140474750	140474750	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140736646	140736646	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140736646	140736646	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF5	84333	broad.mit.edu	37	10	93000258	93000258	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF5	84333	broad.mit.edu	37	10	93000258	93000258	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82764221	82764221	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142542439	142542439	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142542439	142542439	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144873862	144873862	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149294398	149294398	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149294398	149294398	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156873709	156873709	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156878579	156878580	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156873709	156873709	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156878579	156878580	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57325950	57325950	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57329084	57329084	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57325950	57325950	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57328654	57328654	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57329084	57329084	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PENK	5179	broad.mit.edu	37	8	57358364	57358364	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PENK	5179	broad.mit.edu	37	8	57358364	57358364	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754263	49754263	+	Missense_Mutation	SNP	C	A	A	rs137962561		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754263	49754263	+	Missense_Mutation	SNP	C	A	A	rs137962561		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR1	221692	broad.mit.edu	37	6	13286469	13286469	+	Intron	DEL	T	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC3	80012	broad.mit.edu	37	3	169824771	169824771	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC3	80012	broad.mit.edu	37	3	169824771	169824771	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKB	5257	broad.mit.edu	37	16	47622833	47622833	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKB	5257	broad.mit.edu	37	16	47694796	47694796	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKB	5257	broad.mit.edu	37	16	47622833	47622833	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKB	5257	broad.mit.edu	37	16	47694796	47694796	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71713315	71713315	+	Silent	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71713315	71713315	+	Silent	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	517555	517555	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	517555	517555	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18552630	18552630	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CB	5291	broad.mit.edu	37	3	138474811	138474811	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CB	5291	broad.mit.edu	37	3	138477997	138477997	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CB	5291	broad.mit.edu	37	3	138474811	138474811	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CB	5291	broad.mit.edu	37	3	138477997	138477997	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PILRB	29990	broad.mit.edu	37	7	99956740	99956740	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PILRB	29990	broad.mit.edu	37	7	99956740	99956740	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1C	23396	broad.mit.edu	37	19	3646197	3646197	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPSL	266971	broad.mit.edu	37	10	95720012	95720012	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPSL	266971	broad.mit.edu	37	10	95720012	95720012	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22163627	22163627	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22163627	22163627	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81171057	81171057	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81171057	81171057	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102059577	102059577	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102059577	102059577	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDREJ	10343	broad.mit.edu	37	22	46655394	46655394	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDREJ	10343	broad.mit.edu	37	22	46655394	46655394	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110413726	110413726	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110413726	110413726	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51619626	51619626	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51918821	51918822	+	Intron	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51619626	51619626	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51918821	51918822	+	Intron	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159389749	159389749	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159459563	159459566	+	Intron	DEL	TTTC	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159389749	159389749	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159459563	159459566	+	Intron	DEL	TTTC	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42038129	42038129	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42038129	42038129	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8352142	8352142	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8352142	8352142	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95931002	95931002	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95931002	95931002	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41381998	41381998	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41381998	41381998	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242540233	242540233	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242540233	242540233	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	17035740	17035740	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	17035740	17035740	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131950929	131950929	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131950929	131950929	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG6	55200	broad.mit.edu	37	12	6435620	6435620	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG6	55200	broad.mit.edu	37	12	6435620	6435620	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161173110	161173110	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161173110	161173110	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153689939	153689939	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131817987	131817987	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131870229	131870229	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131817987	131817987	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131870229	131870229	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129290329	129290329	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129290329	129290329	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS1	5378	broad.mit.edu	37	2	190717275	190717275	+	Intron	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS1	5378	broad.mit.edu	37	2	190717275	190717275	+	Intron	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118196354	118196354	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118315065	118315065	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118315065	118315065	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMAL1	55228	broad.mit.edu	37	19	46973123	46973123	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMAL1	55228	broad.mit.edu	37	19	46973123	46973123	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA7	375775	broad.mit.edu	37	9	140354833	140354833	+	3'UTR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON2	5445	broad.mit.edu	37	7	95045525	95045525	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON2	5445	broad.mit.edu	37	7	95045525	95045525	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19573144	19573144	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81762871	81762871	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81762871	81762871	+	Intron	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94540564	94540564	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94540577	94540577	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94540564	94540564	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94540577	94540577	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6325019	6325019	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6325019	6325019	+	3'UTR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5E	5529	broad.mit.edu	37	14	63920523	63920523	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5E	5529	broad.mit.edu	37	14	63920523	63920523	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT2	9374	broad.mit.edu	37	6	32123764	32123764	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64883126	64883126	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64883126	64883126	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQLC2	54896	broad.mit.edu	37	1	19644153	19644153	+	5'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQLC2	54896	broad.mit.edu	37	1	19644153	19644153	+	5'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90142071	90142071	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90142071	90142071	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509789	23509789	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509789	23509789	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47258890	47258890	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47258890	47258890	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68982126	68982126	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69039671	69039671	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68982126	68982126	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69039671	69039671	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23393094	23393094	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23393094	23393094	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM1	8842	broad.mit.edu	37	4	16002289	16002289	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM1	8842	broad.mit.edu	37	4	16002289	16002289	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS55	203074	broad.mit.edu	37	8	10383193	10383193	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS55	203074	broad.mit.edu	37	8	10383193	10383193	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43348410	43348410	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43348410	43348410	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43520299	43520299	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43570570	43570570	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43520299	43520299	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43570570	43570570	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23713962	23713962	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23713962	23713962	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC6	5706	broad.mit.edu	37	14	53173934	53173934	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC6	5706	broad.mit.edu	37	14	53173934	53173934	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMF1	9491	broad.mit.edu	37	20	1107881	1107881	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMF1	9491	broad.mit.edu	37	20	1107881	1107881	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40692466	40692467	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40692466	40692467	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18750445	18750445	+	3'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18750445	18750445	+	3'UTR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70980899	70980899	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70980899	70980899	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8389503	8389503	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8389503	8389503	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128294963	128294963	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128294963	128294963	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40739070	40739070	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40739070	40739070	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20478658	20478658	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20478658	20478658	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64525993	64525993	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64525993	64525993	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113804843	113804843	+	3'UTR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113804843	113804843	+	3'UTR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB26	25837	broad.mit.edu	37	16	2203211	2203211	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB26	25837	broad.mit.edu	37	16	2203211	2203211	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB34	83871	broad.mit.edu	37	17	27041710	27041710	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB34	83871	broad.mit.edu	37	17	27041710	27041710	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEP2	79874	broad.mit.edu	37	16	28926032	28926032	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173882136	173882136	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173882136	173882136	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASEF	158158	broad.mit.edu	37	9	85615295	85615295	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASEF	158158	broad.mit.edu	37	9	85615295	85615295	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80382849	80382849	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80382849	80382849	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMS3	27303	broad.mit.edu	37	3	29938770	29938770	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMS3	27303	broad.mit.edu	37	3	29938770	29938770	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMXL2	27288	broad.mit.edu	37	11	7111236	7111236	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMXL2	27288	broad.mit.edu	37	11	7111236	7111236	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48389678	48389678	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48389678	48389678	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79385697	79385697	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79385697	79385697	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103137241	103137241	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103143606	103143606	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103137241	103137241	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103143606	103143606	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8715957	8715957	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8715957	8715957	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111694418	111694418	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111694418	111694418	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFFL	117584	broad.mit.edu	37	17	33348334	33348334	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFFL	117584	broad.mit.edu	37	17	33348334	33348334	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFPL1	5988	broad.mit.edu	37	22	29837555	29837555	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFPL1	5988	broad.mit.edu	37	22	29837555	29837555	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS11	8786	broad.mit.edu	37	16	323726	323726	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS11	8786	broad.mit.edu	37	16	323726	323726	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192335066	192335066	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192335066	192335066	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163042541	163042541	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163042541	163042541	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHD	6007	broad.mit.edu	37	1	25620791	25620791	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHD	6007	broad.mit.edu	37	1	25620791	25620791	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN1	114822	broad.mit.edu	37	8	144464817	144464817	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMKLA	284716	broad.mit.edu	37	1	42878237	42878237	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMKLA	284716	broad.mit.edu	37	1	42878237	42878237	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105105698	105105698	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96503332	96503332	+	Silent	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96503332	96503332	+	Silent	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF168	165918	broad.mit.edu	37	3	196215352	196215353	+	Intron	INS	-	A	A	rs66889619		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF182	221687	broad.mit.edu	37	6	13949728	13949728	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF182	221687	broad.mit.edu	37	6	13949728	13949728	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77614096	77614096	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77614096	77614096	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1L	83853	broad.mit.edu	37	5	10461538	10461538	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1L	83853	broad.mit.edu	37	5	10461538	10461538	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60789856	60789856	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60789856	60789856	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467247	10467247	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467247	10467247	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS15	6209	broad.mit.edu	37	19	1440274	1440274	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS15	6209	broad.mit.edu	37	19	1440274	1440274	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152127701	152127701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152129479	152129479	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152129523	152129523	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152127701	152127701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152129479	152129479	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152129523	152129523	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGC	64121	broad.mit.edu	37	1	39322631	39322631	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGC	64121	broad.mit.edu	37	1	39322631	39322631	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67754008	67754008	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67754008	67754008	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70143611	70143611	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70143611	70143611	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92998379	92998379	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159568063	159568063	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159568063	159568063	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38931504	38931504	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38937347	38937347	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39052106	39052106	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38931504	38931504	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38937347	38937347	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39052106	39052106	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237713806	237713806	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729891	237729891	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237777447	237777447	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237780585	237780585	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237713806	237713806	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729891	237729891	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237777447	237777447	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237780585	237780585	+	Splice_Site	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34048486	34048486	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7L2	645922	broad.mit.edu	37	1	153409692	153409692	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7L2	645922	broad.mit.edu	37	1	153409692	153409692	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101705386	101705386	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764824	92764824	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764824	92764824	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68315605	68315605	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH3	54440	broad.mit.edu	37	X	128926953	128926953	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH3	54440	broad.mit.edu	37	X	128926953	128926953	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARB2	950	broad.mit.edu	37	4	77100619	77100620	+	Intron	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	51975475	51975475	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166856103	166856103	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166856103	166856103	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166179948	166179948	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166179948	166179948	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018120	62018120	+	3'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018120	62018120	+	3'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1B	6338	broad.mit.edu	37	16	23360173	23360173	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1B	6338	broad.mit.edu	37	16	23360173	23360173	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29966031	29966031	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29966031	29966031	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71426691	71426691	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71426691	71426691	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9197321	9197321	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9197321	9197321	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122645244	122645244	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122645244	122645244	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151108132	151108132	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151108132	151108132	+	Silent	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836284	43836284	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836956	43836956	+	Missense_Mutation	SNP	A	G	G	rs56342547		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836284	43836284	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836956	43836956	+	Missense_Mutation	SNP	A	G	G	rs56342547		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT14	346288	broad.mit.edu	37	7	55912167	55912167	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT14	346288	broad.mit.edu	37	7	55912167	55912167	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB2	5055	broad.mit.edu	37	18	61562469	61562469	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB2	5055	broad.mit.edu	37	18	61562469	61562469	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135173664	135173664	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135173664	135173664	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26702165	26702165	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26702165	26702165	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70589199	70589199	+	Intron	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70589199	70589199	+	Intron	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRP1	6422	broad.mit.edu	37	8	41122771	41122771	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRP1	6422	broad.mit.edu	37	8	41122771	41122771	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCG	6445	broad.mit.edu	37	13	23821265	23821265	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134618433	134618433	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134618433	134618433	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130536632	130536632	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130536632	130536632	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235949599	235949599	+	Silent	SNP	G	A	A	rs148142077	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235949599	235949599	+	Silent	SNP	G	A	A	rs148142077	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHKBP1	92799	broad.mit.edu	37	19	41088241	41088241	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHKBP1	92799	broad.mit.edu	37	19	41088241	41088241	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPK	23729	broad.mit.edu	37	17	3514007	3514007	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM1	134549	broad.mit.edu	37	5	132160214	132160214	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM1	134549	broad.mit.edu	37	5	132160214	132160214	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM4	57477	broad.mit.edu	37	X	50350571	50350571	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM4	57477	broad.mit.edu	37	X	50350571	50350571	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117057128	117057128	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117057128	117057128	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3674161	3674161	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3674161	3674161	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC5	8778	broad.mit.edu	37	19	52130747	52130747	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC5	8778	broad.mit.edu	37	19	52130747	52130747	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52034327	52034327	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52034327	52034327	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB2	284759	broad.mit.edu	37	20	1457827	1457827	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB2	284759	broad.mit.edu	37	20	1457827	1457827	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1615854	1615854	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1615854	1615854	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160582310	160582310	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160582310	160582310	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6606242	6606242	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6606242	6606242	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43319051	43319051	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43319051	43319051	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43204691	43204691	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43204691	43204691	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A5	9121	broad.mit.edu	37	17	73096184	73096184	+	Silent	SNP	G	T	T	rs114487026	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A5	9121	broad.mit.edu	37	17	73096184	73096184	+	Silent	SNP	G	T	T	rs114487026	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25861852	25861852	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25861852	25861852	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22364896	22364896	+	Missense_Mutation	SNP	G	T	T	rs138598101		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22391656	22391656	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22364896	22364896	+	Missense_Mutation	SNP	G	T	T	rs138598101		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22391656	22391656	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63078464	63078464	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63078464	63078464	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A2	6582	broad.mit.edu	37	6	160664593	160664593	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43272411	43272411	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43272411	43272411	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92900349	92900349	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92900349	92900349	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A6	293	broad.mit.edu	37	X	1508534	1508534	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A6	293	broad.mit.edu	37	X	1508534	1508534	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107314662	107314662	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107314662	107314662	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B3	51000	broad.mit.edu	37	6	8428028	8428028	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B3	51000	broad.mit.edu	37	6	8428028	8428028	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F4	341880	broad.mit.edu	37	14	58056110	58056110	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F4	341880	broad.mit.edu	37	14	58056110	58056110	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A6	25800	broad.mit.edu	37	18	33706670	33706670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A6	25800	broad.mit.edu	37	18	33706670	33706670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74535261	74535261	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74535261	74535261	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A2	6543	broad.mit.edu	37	19	47935571	47935571	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A2	6543	broad.mit.edu	37	19	47935571	47935571	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3	6550	broad.mit.edu	37	5	488523	488523	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3	6550	broad.mit.edu	37	5	488523	488523	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC3	9126	broad.mit.edu	37	10	112360870	112360870	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214478535	214478535	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214478535	214478535	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121726756	121726756	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121726756	121726756	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25465662	25465662	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96949250	96949250	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96949250	96949250	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX20	124460	broad.mit.edu	37	16	50711509	50711509	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX20	124460	broad.mit.edu	37	16	50711509	50711509	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108366902	108366902	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108366902	108366902	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121340568	121340568	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121448146	121448146	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121340568	121340568	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121448146	121448146	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24048926	24048926	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24048926	24048926	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140L	93349	broad.mit.edu	37	2	231193449	231193449	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140L	93349	broad.mit.edu	37	2	231193449	231193449	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231090572	231090572	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231090572	231090572	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG6	9576	broad.mit.edu	37	10	22678012	22678012	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG6	9576	broad.mit.edu	37	10	22678012	22678012	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEM1	374768	broad.mit.edu	37	17	7324683	7324683	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEM1	374768	broad.mit.edu	37	17	7324683	7324683	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK6	404203	broad.mit.edu	37	5	147594419	147594419	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK6	404203	broad.mit.edu	37	5	147594419	147594419	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOPL	339745	broad.mit.edu	37	2	139326393	139326393	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOPL	339745	broad.mit.edu	37	2	139326393	139326393	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158604367	158604367	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158614124	158614124	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158604367	158604367	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158614124	158614124	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65241820	65241820	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65241820	65241820	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK2	6733	broad.mit.edu	37	7	104782778	104782778	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK2	6733	broad.mit.edu	37	7	104782778	104782778	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPRB	58477	broad.mit.edu	37	3	133524673	133524673	+	5'Flank	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPRB	58477	broad.mit.edu	37	3	133524673	133524673	+	5'Flank	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRR	63826	broad.mit.edu	37	17	2210386	2210386	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRR	63826	broad.mit.edu	37	17	2210386	2210386	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149485870	149485870	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149485870	149485870	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA5	29906	broad.mit.edu	37	18	44284489	44284489	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104099535	104099535	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104099535	104099535	+	Intron	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120973916	120973916	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120973916	120973916	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46331179	46331179	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46365749	46365749	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46331179	46331179	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46365749	46365749	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70596264	70596264	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70596264	70596264	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48065433	48065433	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48065433	48065433	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10958967	10958967	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10958967	10958967	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152443811	152443811	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152443811	152443811	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33532767	33532767	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33532767	33532767	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114680279	114680279	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACR3	6870	broad.mit.edu	37	4	104577453	104577453	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACR3	6870	broad.mit.edu	37	4	104577453	104577453	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70613120	70613120	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAL1	6886	broad.mit.edu	37	1	47685325	47685325	+	3'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAL1	6886	broad.mit.edu	37	1	47685325	47685325	+	3'UTR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D29	26083	broad.mit.edu	37	17	28889959	28889959	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D29	26083	broad.mit.edu	37	17	28889959	28889959	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348811	60348811	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348811	60348811	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG4	9238	broad.mit.edu	37	7	45141438	45141438	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG4	9238	broad.mit.edu	37	7	45141438	45141438	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX2	6909	broad.mit.edu	37	17	59485334	59485334	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX2	6909	broad.mit.edu	37	17	59485334	59485334	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44555055	44555056	+	Missense_Mutation	DNP	GA	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44555055	44555056	+	Missense_Mutation	DNP	GA	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1B	9623	broad.mit.edu	37	14	96152719	96152719	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1B	9623	broad.mit.edu	37	14	96152719	96152719	+	5'Flank	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP1	6950	broad.mit.edu	37	6	160200861	160200861	+	Intron	DEL	A	-	-	rs147097290	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET2	54790	broad.mit.edu	37	4	106157611	106157611	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET2	54790	broad.mit.edu	37	4	106157611	106157611	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195785607	195785607	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195785607	195785607	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133973081	133973081	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133973081	133973081	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155485654	155485654	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56816456	56816456	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56816456	56816456	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF2	53345	broad.mit.edu	37	19	19375400	19375400	+	3'UTR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF2	53345	broad.mit.edu	37	19	19375400	19375400	+	3'UTR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEFF2	23671	broad.mit.edu	37	2	192821012	192821012	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEFF2	23671	broad.mit.edu	37	2	192821012	192821012	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32956214	32956214	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32956214	32956214	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM155	132332	broad.mit.edu	37	4	122682832	122682832	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM155	132332	broad.mit.edu	37	4	122682832	122682832	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130761691	130761691	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130761691	130761691	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63A	9725	broad.mit.edu	37	1	226041531	226041531	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM81	388730	broad.mit.edu	37	1	205053467	205053467	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM81	388730	broad.mit.edu	37	1	205053467	205053467	+	5'UTR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPO	7112	broad.mit.edu	37	12	98938261	98938261	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPO	7112	broad.mit.edu	37	12	98938261	98938261	+	Silent	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68810101	68810101	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68810101	68810101	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170858263	170858263	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170858263	170858263	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57078041	57078042	+	Intron	INS	-	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175324531	175324531	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175324531	175324531	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47453485	47453485	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47453485	47453485	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1A	1861	broad.mit.edu	37	9	132586260	132586260	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1A	1861	broad.mit.edu	37	9	132586260	132586260	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX	9760	broad.mit.edu	37	8	60031374	60031374	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX	9760	broad.mit.edu	37	8	60031374	60031374	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577587	7577587	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577587	7577587	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L3	89882	broad.mit.edu	37	9	6328912	6328912	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L3	89882	broad.mit.edu	37	9	6328912	6328912	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52	7163	broad.mit.edu	37	8	80954840	80954840	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52	7163	broad.mit.edu	37	8	80954840	80954840	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10907119	10907120	+	Intron	DNP	TG	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10909548	10909548	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10910351	10910351	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971816	10971816	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10907119	10907120	+	Intron	DNP	TG	CT	CT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10909548	10909548	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10910351	10910351	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971816	10971816	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK2	66008	broad.mit.edu	37	2	202249026	202249026	+	Intron	SNP	G	A	A	rs138236009	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72969365	72969365	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72969365	72969365	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB3	57761	broad.mit.edu	37	20	376888	376888	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB3	57761	broad.mit.edu	37	20	376888	376888	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM22	10346	broad.mit.edu	37	11	5798752	5798752	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM22	10346	broad.mit.edu	37	11	5798752	5798752	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM26	7726	broad.mit.edu	37	6	30164347	30164347	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM26	7726	broad.mit.edu	37	6	30164347	30164347	+	Silent	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248039439	248039439	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248039439	248039439	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM5	85363	broad.mit.edu	37	11	5877950	5877950	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM5	85363	broad.mit.edu	37	11	5877950	5877950	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ1	10194	broad.mit.edu	37	18	72999000	72999000	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ1	10194	broad.mit.edu	37	18	72999000	72999000	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN19	144448	broad.mit.edu	37	12	85413594	85413594	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN19	144448	broad.mit.edu	37	12	85413594	85413594	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC30B	150737	broad.mit.edu	37	2	178417116	178417116	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91060070	91060070	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91060070	91060070	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179418668	179418668	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179490203	179490203	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179535937	179535937	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179595957	179595957	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179418668	179418668	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179490203	179490203	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179535937	179535937	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179595957	179595957	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP2	10844	broad.mit.edu	37	10	135106639	135106639	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP2	10844	broad.mit.edu	37	10	135106639	135106639	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWF1	5756	broad.mit.edu	37	12	44193198	44193198	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWF1	5756	broad.mit.edu	37	12	44193198	44193198	+	Intron	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1B	441250	broad.mit.edu	37	7	72234128	72234128	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1B	441250	broad.mit.edu	37	7	72234128	72234128	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2B	7320	broad.mit.edu	37	5	133712231	133712231	+	Intron	SNP	A	T	T	rs75153813	byFrequency;by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2B	7320	broad.mit.edu	37	5	133712231	133712231	+	Intron	SNP	A	T	T	rs75153813	byFrequency;by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156974683	156974683	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156974683	156974683	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN1	29979	broad.mit.edu	37	9	86284187	86284187	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN1	29979	broad.mit.edu	37	9	86284187	86284187	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR3	130507	broad.mit.edu	37	2	170933697	170933697	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR3	130507	broad.mit.edu	37	2	170933697	170933697	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN4	23190	broad.mit.edu	37	2	136533787	136533787	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN4	23190	broad.mit.edu	37	2	136533787	136533787	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234663865	234663865	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234663865	234663865	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A6	54578	broad.mit.edu	37	2	234621632	234621632	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A6	54578	broad.mit.edu	37	2	234621632	234621632	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70080232	70080232	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69536220	69536220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69536220	69536220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33491121	33491121	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33491121	33491121	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216040409	216040409	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP16	10600	broad.mit.edu	37	21	30415997	30415997	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP16	10600	broad.mit.edu	37	21	30415997	30415997	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61697885	61697885	+	5'Flank	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61697885	61697885	+	5'Flank	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38979315	38979315	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38979324	38979324	+	IGR	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	50979881	50979881	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	92814007	92814007	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18210804	18210804	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23815174	23815174	+	IGR	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39183259	39183259	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50147054	50147054	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55493768	55493768	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55798979	55798979	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59259659	59259659	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89378330	89378330	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55688006	55688006	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	94915543	94915543	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64385520	64385520	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19855208	19855208	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147473	20147473	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44589932	44589932	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	51171889	51171889	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	74865250	74865250	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	78526374	78526374	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102416060	102416060	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21365523	21365523	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28702910	28702910	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	46391456	46391456	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	94577093	94577093	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	27145228	27145228	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368454	32368454	+	IGR	SNP	G	A	A	rs148474318	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33498876	33498876	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34338649	34338649	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34655283	34655283	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34782881	34782881	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	72039275	72039275	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	27348669	27348669	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30433419	30433419	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	33734763	33734763	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60316474	60316474	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	33421807	33421807	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47021998	47021998	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	60083452	60083452	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	70285607	70285607	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675659	23675659	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	40530293	40530293	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55119493	55119493	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104615784	104615784	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121484516	121484516	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903600	148903600	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149092916	149092916	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245662	166245662	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238655627	238655627	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247393602	247393602	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248605215	248605215	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	43357896	43357896	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	48015903	48015903	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79987062	79987062	+	IGR	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29449549	29449549	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	5273199	5273199	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16346407	16346407	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16349491	16349491	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16350132	16350132	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16366207	16366207	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405870	16405870	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047679	42047679	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464810	90464810	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91766644	91766644	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800121	91800121	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97716092	97716092	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	129044350	129044351	+	IGR	DNP	GG	TT	TT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	155830427	155830427	+	IGR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171735570	171735570	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189270782	189270782	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65297717	65297717	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	73793649	73793649	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117054804	117054804	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120911455	120911455	+	IGR	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14653108	14653108	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451804	15451804	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41952048	41952049	+	IGR	DNP	CA	AG	AG			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98015387	98015387	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975916	121975916	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	130122500	130122500	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48116577	48116577	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48181870	48181870	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48182069	48182069	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64151270	64151270	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	78206068	78206068	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97096843	97096843	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399579	136399579	+	IGR	SNP	A	T	T	rs34553888		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141587452	141587452	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38694989	38694989	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56231082	56231082	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62672188	62672188	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028370	63028370	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63563059	63563059	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63962111	63962111	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	83293412	83293412	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92071546	92071546	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	122392643	122392643	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126174	43126174	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126552	43126552	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43395069	43395069	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47885634	47885634	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7056138	7056138	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89497840	89497840	+	IGR	SNP	C	A	A	rs111517013		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90425315	90425315	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	110860102	110860102	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	28888831	28888831	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32333881	32333881	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43163070	43163070	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43163275	43163275	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134746032	134746032	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136523793	136523793	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139115667	139115667	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146353801	146353801	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179967	26179967	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27537061	27537061	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40794321	40794321	+	IGR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79817401	79817401	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14093086	14093086	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	28690077	28690077	+	IGR	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38184555	38184555	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38979315	38979315	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38979324	38979324	+	IGR	DEL	G	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	48033087	48033087	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	50979881	50979881	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	92814007	92814007	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18210804	18210804	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39183259	39183259	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50147054	50147054	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55493768	55493768	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55798979	55798979	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59259659	59259659	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89378330	89378330	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55688006	55688006	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	94915543	94915543	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64385520	64385520	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19855208	19855208	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147473	20147473	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44589932	44589932	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	51171889	51171889	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	74865250	74865250	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	78526374	78526374	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102416060	102416060	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28702910	28702910	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	46391456	46391456	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	27145228	27145228	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368454	32368454	+	IGR	SNP	G	A	A	rs148474318	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368485	32368485	+	IGR	SNP	C	T	T	rs147649682	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34338649	34338649	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34655283	34655283	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34782881	34782881	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	72039275	72039275	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	27348669	27348669	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30433419	30433419	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	33734763	33734763	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60316474	60316474	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	33421807	33421807	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47021998	47021998	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	60083452	60083452	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	70285607	70285607	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675659	23675659	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	40530293	40530293	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55119493	55119493	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104615784	104615784	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121484516	121484516	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903600	148903600	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149092916	149092916	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149100969	149100969	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245662	166245662	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246589	166246589	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247393602	247393602	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248605215	248605215	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	43357896	43357896	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79987062	79987062	+	IGR	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29449549	29449549	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	5273199	5273199	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16346407	16346407	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16349491	16349491	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16350132	16350132	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16366207	16366207	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405870	16405870	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	183936365	183936365	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047679	42047679	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464810	90464810	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91766644	91766644	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800121	91800121	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800991	91800991	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97716092	97716092	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	129044351	129044351	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	155830427	155830427	+	IGR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171735570	171735570	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189270782	189270782	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65297717	65297717	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69650644	69650644	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	73793649	73793649	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117054804	117054804	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120911455	120911455	+	IGR	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14653091	14653091	+	IGR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14653108	14653108	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451804	15451804	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41952048	41952049	+	IGR	DNP	CA	AG	AG			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98015387	98015387	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975916	121975916	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	130122500	130122500	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48116577	48116577	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48181870	48181870	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48182069	48182069	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64151270	64151270	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	78206068	78206068	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97096843	97096843	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399579	136399579	+	IGR	SNP	A	T	T	rs34553888		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141587452	141587452	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38694989	38694989	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56231082	56231082	+	IGR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62672188	62672188	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028370	63028370	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63563059	63563059	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63962111	63962111	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	83293412	83293412	+	IGR	SNP	A	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92071546	92071546	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	122392643	122392643	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126174	43126174	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126552	43126552	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43395069	43395069	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47885634	47885634	+	IGR	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7056138	7056138	+	IGR	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89497840	89497840	+	IGR	SNP	C	A	A	rs111517013		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90425314	90425315	+	IGR	DNP	CC	AA	AA			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	110860102	110860102	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	28888831	28888831	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32333881	32333881	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43163070	43163070	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43163275	43163275	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115812162	115812162	+	IGR	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134746032	134746032	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136523793	136523793	+	IGR	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139115667	139115667	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146353801	146353801	+	IGR	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179967	26179967	+	IGR	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27537061	27537061	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40794321	40794321	+	IGR	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	54699007	54699007	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79817401	79817401	+	IGR	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14093086	14093086	+	IGR	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	28690077	28690077	+	IGR	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155169495	155169495	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155169495	155169495	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108309106	108309106	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108116042	108116042	+	Intron	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108309106	108309106	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEPH1	79674	broad.mit.edu	37	3	157131722	157131722	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEPH1	79674	broad.mit.edu	37	3	157131722	157131722	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77901515	77901515	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77901515	77901515	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79980489	79980489	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79980489	79980489	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS36	51028	broad.mit.edu	37	13	52990248	52990248	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS36	51028	broad.mit.edu	37	13	52990248	52990248	+	Intron	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG4	11326	broad.mit.edu	37	X	65242611	65242611	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG4	11326	broad.mit.edu	37	X	65242611	65242611	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124012205	124012205	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124012205	124012205	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11	51729	broad.mit.edu	37	12	14940012	14940012	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71177028	71177028	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71177028	71177028	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85729687	85729687	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85729687	85729687	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9497415	9497415	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9497415	9497415	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR1	9948	broad.mit.edu	37	4	10117832	10117832	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR1	9948	broad.mit.edu	37	4	10117832	10117832	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR81	124997	broad.mit.edu	37	17	1631425	1631425	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR81	124997	broad.mit.edu	37	17	1631425	1631425	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141429403	141429403	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141429403	141429403	+	Silent	SNP	G	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1L1	54904	broad.mit.edu	37	8	38172084	38172084	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1L1	54904	broad.mit.edu	37	8	38172084	38172084	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP3	8838	broad.mit.edu	37	6	112382465	112382466	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP3	8838	broad.mit.edu	37	6	112382465	112382466	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK3	65267	broad.mit.edu	37	X	54359977	54359977	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK3	65267	broad.mit.edu	37	X	54359977	54359977	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT2	7472	broad.mit.edu	37	7	116918433	116918433	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT2	7472	broad.mit.edu	37	7	116918433	116918433	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	6021527	6021527	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	6021527	6021527	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168104772	168104772	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168104772	168104772	+	Silent	SNP	A	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100377142	100377142	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100377142	100377142	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72829024	72829024	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72829024	72829024	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29640680	29640680	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106815427	106815427	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106815427	106815427	+	Silent	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE28	57732	broad.mit.edu	37	4	2321975	2321975	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE28	57732	broad.mit.edu	37	4	2321975	2321975	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF132	7691	broad.mit.edu	37	19	58945489	58945489	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF132	7691	broad.mit.edu	37	19	58945489	58945489	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27418997	27418997	+	3'UTR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27418997	27418997	+	3'UTR	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF195	7748	broad.mit.edu	37	11	3381670	3381670	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44469355	44469355	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44469355	44469355	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF271	10778	broad.mit.edu	37	18	32886652	32886652	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF273	10793	broad.mit.edu	37	7	64378058	64378074	+	Frame_Shift_Del	DEL	GATAACTACAGAAACCT	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF273	10793	broad.mit.edu	37	7	64378058	64378074	+	Frame_Shift_Del	DEL	GATAACTACAGAAACCT	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506349	178506349	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64414707	64414707	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64414707	64414707	+	Intron	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF410	57862	broad.mit.edu	37	14	74364978	74364978	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF410	57862	broad.mit.edu	37	14	74364978	74364978	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF514	84874	broad.mit.edu	37	2	95818312	95818312	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF514	84874	broad.mit.edu	37	2	95818312	95818312	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039383	31039383	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039383	31039383	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF554	115196	broad.mit.edu	37	19	2823002	2823002	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF554	115196	broad.mit.edu	37	19	2834217	2834217	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF554	115196	broad.mit.edu	37	19	2823002	2823002	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF554	115196	broad.mit.edu	37	19	2834217	2834217	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF619	285267	broad.mit.edu	37	3	40523250	40523250	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF619	285267	broad.mit.edu	37	3	40523250	40523250	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23927160	23927160	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23941408	23941408	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23927160	23927160	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23941408	23941408	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF772	400720	broad.mit.edu	37	19	57985284	57985284	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF772	400720	broad.mit.edu	37	19	57985284	57985284	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802212	185802212	+	Missense_Mutation	SNP	A	T	T	rs34197025		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802212	185802212	+	Missense_Mutation	SNP	A	T	T	rs34197025		TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF826	664701	broad.mit.edu	37	19	20591773	20591773	+	5'UTR	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF826	664701	broad.mit.edu	37	19	20591773	20591773	+	5'UTR	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF845	91664	broad.mit.edu	37	19	53855173	53855173	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF90	7643	broad.mit.edu	37	19	20191165	20191165	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF90	7643	broad.mit.edu	37	19	20191165	20191165	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47865914	47865914	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47865914	47865914	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238045794	238045794	+	Silent	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564191	74564191	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101490293	101490294	+	5'Flank	DNP	GG	AT	AT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22236589	22236589	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22372790	22372790	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	23008141	23008141	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	62547814	62547814	+	5'Flank	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34741042	34741042	+	5'Flank	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14218424	14218424	+	5'Flank	SNP	T	C	C	rs147131293	by1000genomes	TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142713463	142713463	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173331643	173331643	+	Intron	DEL	A	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	175581751	175581751	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24171373	24171373	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10214232	10214232	+	5'Flank	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552896	100552896	+	RNA	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100610215	100610215	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142176338	142176338	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142223903	142223903	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564191	74564191	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101490293	101490294	+	5'Flank	DNP	GG	AT	AT			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22236589	22236589	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22372790	22372790	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	23008141	23008141	+	Intron	SNP	T	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	62547814	62547814	+	5'Flank	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34741042	34741042	+	5'Flank	SNP	A	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142713463	142713463	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142799723	142799723	+	Intron	SNP	G	C	C			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173331643	173331643	+	Intron	DEL	A	-	-			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24171373	24171373	+	Intron	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10214232	10214232	+	5'Flank	SNP	T	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552896	100552896	+	RNA	SNP	G	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100610215	100610215	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142176338	142176338	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142223903	142223903	+	Intron	SNP	C	G	G			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66545517	66545517	+	Intron	SNP	C	A	A			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	155254973	155254973	+	Silent	SNP	C	T	T			TCGA-44-6778-01A-11D-1855-08	TCGA-44-6778-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
